|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040549 ID=TCONS_00040549|Name=TCONS_00040549|organism=Clytia hemisphaerica|type=transcript|length=888bp
gaaaaaaaataccattttttgaaagatggaCAAAATCTAGGTGTGTCTGA
AAAAAGGTTGTCTCGTACGACTTTGGAATTGCAAGGAAAAGAAGTGCAAA
AAGGGCTAAAAATCTGATTGGTTTCAATAGTTTAGTAAAAGCATTATCTG
AAAGGTTAGAACCAATTTTAATAGATTTAGAAATACCTTTCACATTTTTT
TGAGCTGTTAAAGCAAAACTTCCTATACACACACGATATGCCTCTATAGA
TATCATATTGCAATTCTGTAAGCTTTAGCAAAAGTAAGGTGAAACGtttt
caaaaagtatatgaatatttgtatatattttatcTCACGTGTTTGGTATA
TAATATAAGAAGGTAGAGGTGTAGGTATTAGGGAAAGGTTTTGTTTGTAC
AAGGTTTTTATTATATATATGTATATAAGTTTCAAAGTgcggattttcct
tcgcacaagtttctaggtgcggattccccttcgcacaagtttctaggtac
ggattttccttcgcacaagtttctaggtgcggatttcccttcgcacaagt
ttctaggtgcggattccccttcgcacaagtttctaggtacggattttcct
tcgcacaagtttctaggtgcggatttcccttcgcacaagtttctaggtgc
ggatttcccttcgcacaatTCAATATTATATagtcaatttaatttgattc
aATAATAGTTTGTATATATACAGTAAGTTCAGTAGATATAATAGGTTCAA
GGTTAAGTAGGTTAAGCAGGTTAAGTAGGTTAAGTAAGCTTAGCAAGAGG
ATGCAAGGAGCTCGCATGCAACCTCTGGGTTTTGTAGCTGCTTGTCTGAT
ATTGAACACAGACAAGCTTATGCTATCTTTTCTTTGTA Run BLAST on NCBI transcript from alignment at sc0002463:21459..22346 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040549 ID=TCONS_00040549|Name=TCONS_00040549|organism=Clytia hemisphaerica|type=transcript|length=888bp|location=Sequence derived from alignment at sc0002463:21459..22346 (Clytia hemisphaerica)
TACAAAGAAAAGATAGCATAAGCTTGTCTGTGTTCAATATCAGACAAGCA
GCTACAAAACCCAGAGGTTGCATGCGAGCTCCTTGCATCCTCTTGCTAAG
CTTACTTAACCTACTTAACCTGCTTAACCTACTTAACCTTGAACCTATTA
TATCTACTGAACTTACTGTATATATACAAACTATTATtgaatcaaattaa
attgactATATAATATTGAattgtgcgaagggaaatccgcacctagaaac
ttgtgcgaagggaaatccgcacctagaaacttgtgcgaaggaaaatccgt
acctagaaacttgtgcgaaggggaatccgcacctagaaacttgtgcgaag
ggaaatccgcacctagaaacttgtgcgaaggaaaatccgtacctagaaac
ttgtgcgaaggggaatccgcacctagaaacttgtgcgaaggaaaatccgc
ACTTTGAAACTTATATACATATATATAATAAAAACCTTGTACAAACAAAA
CCTTTCCCTAATACCTACACCTCTACCTTCTTATATTATATACCAAACAC
GTGAgataaaatatatacaaatattcatatactttttgaaaaCGTTTCAC
CTTACTTTTGCTAAAGCTTACAGAATTGCAATATGATATCTATAGAGGCA
TATCGTGTGTGTATAGGAAGTTTTGCTTTAACAGCTCAAAAAAATGTGAA
AGGTATTTCTAAATCTATTAAAATTGGTTCTAACCTTTCAGATAATGCTT
TTACTAAACTATTGAAACCAATCAGATTTTTAGCCCTTTTTGCACTTCTT
TTCCTTGCAATTCCAAAGTCGTACGAGACAACCTTTTTTCAGACACACCT
AGATTTTGtccatctttcaaaaaatggtattttttttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040549-exon-sc0002463-1491911889:21459..22346 | TCONS_00040549-exon-sc0002463-1491911889:21459..22346 | Clytia hemisphaerica | exon |
| TCONS_00040549-exon-sc0002463-1510915933:21459..22346 | TCONS_00040549-exon-sc0002463-1510915933:21459..22346 | Clytia hemisphaerica | exon |
| TCONS_00040549-exon-sc0002463-1575043694:21459..22346 | TCONS_00040549-exon-sc0002463-1575043694:21459..22346 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002463 | supercontig | sc0002463:21459..22346 . |
Blast
The following BLAST results are available for this feature:
|
