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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040514 ID=TCONS_00040514|Name=TCONS_00040514|organism=Clytia hemisphaerica|type=transcript|length=413bp
CTGAGTAATCCTGTTAGTCAGTTGTAGCACCTCTTTGGAGTGGACTGGTG
GAGGCAGCACAAGGCATAGAACTGAGATCCAGATGCGCATGAGCCCAAGA
AGAGAAACGATTGAAAGAAATGGCAATCCCTGAACACCAAAACCTaaact
ttgaaaaacctttTGGGTTAAAGAATAAATTTGGACATGTTGTCATCTTG
GCTGGTATTAAATTTTGGAAGAACAATGTCGTGATGGACAAGCTAAATAA
AGTTCAATTTTACTTTCAGTATTGTGGATATGGTTAAGCAATTTTTTCTA
CCTTTTGACAACCTTATCAATTTTTATCTAACTAATTTTTATTCCAATTA
ACAATAGGTGTGATTCAGACTCGGTCAAGTTTGTCATGGGACTACTACAG
ACACCAGATTTAC Run BLAST on NCBI transcript from alignment at sc0002447:2481..3801- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040514 ID=TCONS_00040514|Name=TCONS_00040514|organism=Clytia hemisphaerica|type=transcript|length=1321bp|location=Sequence derived from alignment at sc0002447:2481..3801- (Clytia hemisphaerica)
CTGAGTAATCCTGTTAGTCAGTTGTAGCACCTCTTTGGAGTGGACTGGTG
GAGGCAGCACAAGGCATAGAACTGAGATCCAGATGCGCATGAGCCCAAGA
AGAGAAACGATTGAAAGAAATGGCAATCCCTGAACACCAAAACCTAAACT
TTGAAAAACCTTTTGGGTATGTTACTTTTGACTTCTTTATGAAAAAGCTT
TAAGATGCTATGTTTATTTTTTTACACCTCTACAATTATTGGTGGTTCAA
GTTATAGTCTGTTACCCCCCTGTGGTCGATATGGACATTTCCTTTTTTTG
AAAAACTTCAGGATTATGAACATTCATGATTTTTTATGAGAAAATCTTGG
ATTTTCAGATACTTGGAAATATAGAAAATAGAGCAAATTTTATGGATTTT
CCAATACTTGGTACGGNGCCTCTCAATTTTTCGTCCCCCCCCCCCCCCTG
TGATGGACTTGGAAAAGCAGATTGCCTAGTGCTCAACTACTAAAATTTTA
TGGTGTACTTAATTTTGCGAGAAACACCCACAAAATAAAATAGCAGAGAG
AATTTTTTAAGGGATCCACTGGATGTTTTGTATGTTTTTTGACGAAAAAC
AATTTTGACGCAATTTTACAGAGCTAACCGTTATACAGCATTTCCTATGA
TATAACTGCAAGAAAGTAAGAATATTTTTTCCCGAAGCTCAACCAGCTAT
TTATGTTAAAATTTTTTACATTAAAAGCAAGTTTGGATAGTAATCCGTCA
AAAAGGATAAACGTAAATCCACTTGTATGATCCAATTTTTAGGAAGAGCC
GTCTTTTTATGAACTTCCAACCCTAATCAAAGATTGTTTTCTATTCCATC
CCATTTCTCTGTGTGGACAATGTCAGTACAATACAGTCTAATTCATAAAA
TACTACCAACAGGTGAGGGAATTGAAATTGATTGCACTGTCTGAGATGGT
ACTGTAACTGGTGAATTCTAAAAGCTTTGGTAGTTCCTGAGTTGTGTAGA
TTTCTCTTCGTTTTGAGAGTTTTTGGGAGACATAAATGGCTCATCTTCTA
ATGATTTTTATATTCTTTTTACAGGTTAAAGAATAAATTTGGACATGTTG
TCATCTTGGCTGGTATTAAATTTTGGAAGAACAATGTCGTGATGGACAAG
CTAAATAAAGTTCAATTTTACTTTCAGTATTGTGGATATGGTTAAGCAAT
TTTTTCTACCTTTTGACAACCTTATCAATTTTTATCTAACTAATTTTTAT
TCCAATTAACAATAGGTGTGATTCAGACTCGGTCAAGTTTGTCATGGGAC
TACTACAGACACCAGATTTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040514-exon-sc0002447-1575043694:3636..3801 | TCONS_00040514-exon-sc0002447-1575043694:3636..3801 | Clytia hemisphaerica | exon |
| TCONS_00040514-exon-sc0002447-1575043694:2481..2727 | TCONS_00040514-exon-sc0002447-1575043694:2481..2727 | Clytia hemisphaerica | exon |
| TCONS_00040514-exon-sc0002447-1510915933:3636..3801 | TCONS_00040514-exon-sc0002447-1510915933:3636..3801 | Clytia hemisphaerica | exon |
| TCONS_00040514-exon-sc0002447-1510915933:2481..2727 | TCONS_00040514-exon-sc0002447-1510915933:2481..2727 | Clytia hemisphaerica | exon |
| TCONS_00040514-exon-sc0002447-1491911889:3636..3801 | TCONS_00040514-exon-sc0002447-1491911889:3636..3801 | Clytia hemisphaerica | exon |
| TCONS_00040514-exon-sc0002447-1491911889:2481..2727 | TCONS_00040514-exon-sc0002447-1491911889:2481..2727 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002447 | supercontig | sc0002447:2481..3801 - |
Blast
The following BLAST results are available for this feature:
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