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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040432 ID=TCONS_00040432|Name=TCONS_00040432|organism=Clytia hemisphaerica|type=transcript|length=1989bp
CTCAAATACAAAAAGGATTCTCCGCAACTCCAGTAAGCAGCTACAGAGAC
TATTGTTCAACTTTTGGAAAATCACCAAACATCAGCAATATAACTAAAAT
CGCACTTGGTGATTCACCAACTAAAACAATCTCTATTCCAGCAACTCAGA
CTCCTATCTTGGTCACACCCAGAAGAAACGCCAAGGAGACTGCCACATCC
ATATCAAATGAAACACCATCTTTATCACATGATAAGCTTGCCCCTAATGA
AGACATCAACTCAATTTCACAATCACAAAATGTCATCTTGGTAACACCAA
AACGAAGCGTTTCAAAGAAAAGACCAGAAACAGCACCGGTCAGTGAAGCC
AAGTCGACTGGAATTTCGTTAGGTGAAACCTCCGCTTTCGCATCTGTACC
CATGAAAAGGATAAAGTTATCAAATGAGGCTGAACCGGTCAAACTACCCT
CAGTGTCAACCATACTTCCAAGGCTTAACCAAACGTCTCCCAAGAAAAAC
TCAATAGCACCTTCCAGCCAAGAGCTGGTGGCAAGCAGTCAATCACCACA
ACTTTGTATCCCGACAACTGCCACACCAAAAGCCAACCCTCTTAAATTGC
TGATGGAACAAAAAGAGGATGAAAATCCAACAATCAATGATATCAAAATG
GCGTCCCCTCCAAAACAATTTTCATCAAATCTACCTATACCTTCAACTAA
TACAAACACATCAGTCCAGACCAAGCTCTCGTCTCCGACCAAACCTCTCC
CTATCAACACATTGCCTGGAGGATCACCACCTCAGATACTCAACACAGAC
ACCATATCTTCAATTCAAAATAAGGATACTAACCCACAAAGCCAATTCAA
AGTCGCTGATGAGAAGAAGGATCCACAGAATCGCAGAAAAACGTACACTC
TGAGCAAAGACCGAAGGTTGACAATCCAAGATGTGATTCTGGCTGGCAAC
GAAAAATNTCACTCTGAGCAAGTCAGACTTACCCTTAGTCACCCCTTCGT
CACCTGAGAAAACCAACGTCACCGAGAAACCGAAGAACGATCGACGGGTG
ACATTCGTTATTCCACCGAAACCCTCAACGACCGAACAGTCTCTTACTGA
ACAGTCTTCACTCAACGATAAGCCGAAAAACCAGACAATTGTTCTCGAGA
AAGTCGACCAAAGTGAAAGTAAGAAGACAAAAAGCAACAAAGACCGAAGG
TTGACAATCCAAGATATGATTCTGGCTGGCAACGAAAAATGCATTGATGA
TTCAACCAACTTCGAACAAACTCTTGTGTTTAAACCACCCATTGCTAATA
GTTCAATGATGGTTTTTCCTTCTGATGGCTTGGTGTCAACTGAAATTACA
CCAAAAGCTCCTCCACTATCGACCAAGGAGACTACATCCAATGAGACATT
TGTTGTCACTGAGACTAAGCAAAAACCAACCCAAAATCACACCAGTCAAT
CGCTTCAGACTCCTGGATCTGCTGAAAATATTGATGACCAGTTTATACAG
TCTGGAGCAAACGAGGTGCCAATTACAAACAAAACTTTTGTCGTTGAAGA
GCCATCAAAGATGGAGAAGATGTCAAAAACGTTGGAAATGAACTTCACTA
AAGAAACTCTTGTCGTAGAAAAACCCACAAAGATGTCGAAAACTATGGAA
AAGACCTTCACTAAAGAGACACTGCCTGTAGACGTTTCTTCGCTTGTTGA
GGAACAAGCAAGTTCTTTGGTCTCTCAAGCTATTGCTGAAGCAGATCTAT
CCATTGCTAAAGAGAACCAACCTACCCTTCCTAATGAAGAAACATTGAAG
AACGAAATTGTTCAACAGATCATGAGCCAGTTAGCAGTTTCACAAGCTAA
CACCAATATTGCAGAATCTGTTCCATCTCAACAAAAAGATGAGATTCAAA
GAATGGTGATGAACATGCTCCAGAAATATAATCTACCAACTAAAGAAACA
ATTACACCTGTTGCCACGGCAGACCAAACTGATAGAGGT Run BLAST on NCBI transcript from alignment at sc0002426:20847..22835+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040432 ID=TCONS_00040432|Name=TCONS_00040432|organism=Clytia hemisphaerica|type=transcript|length=1989bp|location=Sequence derived from alignment at sc0002426:20847..22835+ (Clytia hemisphaerica)
CTCAAATACAAAAAGGATTCTCCGCAACTCCAGTAAGCAGCTACAGAGAC
TATTGTTCAACTTTTGGAAAATCACCAAACATCAGCAATATAACTAAAAT
CGCACTTGGTGATTCACCAACTAAAACAATCTCTATTCCAGCAACTCAGA
CTCCTATCTTGGTCACACCCAGAAGAAACGCCAAGGAGACTGCCACATCC
ATATCAAATGAAACACCATCTTTATCACATGATAAGCTTGCCCCTAATGA
AGACATCAACTCAATTTCACAATCACAAAATGTCATCTTGGTAACACCAA
AACGAAGCGTTTCAAAGAAAAGACCAGAAACAGCACCGGTCAGTGAAGCC
AAGTCGACTGGAATTTCGTTAGGTGAAACCTCCGCTTTCGCATCTGTACC
CATGAAAAGGATAAAGTTATCAAATGAGGCTGAACCGGTCAAACTACCCT
CAGTGTCAACCATACTTCCAAGGCTTAACCAAACGTCTCCCAAGAAAAAC
TCAATAGCACCTTCCAGCCAAGAGCTGGTGGCAAGCAGTCAATCACCACA
ACTTTGTATCCCGACAACTGCCACACCAAAAGCCAACCCTCTTAAATTGC
TGATGGAACAAAAAGAGGATGAAAATCCAACAATCAATGATATCAAAATG
GCGTCCCCTCCAAAACAATTTTCATCAAATCTACCTATACCTTCAACTAA
TACAAACACATCAGTCCAGACCAAGCTCTCGTCTCCGACCAAACCTCTCC
CTATCAACACATTGCCTGGAGGATCACCACCTCAGATACTCAACACAGAC
ACCATATCTTCAATTCAAAATAAGGATACTAACCCACAAAGCCAATTCAA
AGTCGCTGATGAGAAGAAGGATCCACAGAATCGCAGAAAAACGTACACTC
TGAGCAAAGACCGAAGGTTGACAATCCAAGATGTGATTCTGGCTGGCAAC
GAAAAATNTCACTCTGAGCAAGTCAGACTTACCCTTAGTCACCCCTTCGT
CACCTGAGAAAACCAACGTCACCGAGAAACCGAAGAACGATCGACGGGTG
ACATTCGTTATTCCACCGAAACCCTCAACGACCGAACAGTCTCTTACTGA
ACAGTCTTCACTCAACGATAAGCCGAAAAACCAGACAATTGTTCTCGAGA
AAGTCGACCAAAGTGAAAGTAAGAAGACAAAAAGCAACAAAGACCGAAGG
TTGACAATCCAAGATATGATTCTGGCTGGCAACGAAAAATGCATTGATGA
TTCAACCAACTTCGAACAAACTCTTGTGTTTAAACCACCCATTGCTAATA
GTTCAATGATGGTTTTTCCTTCTGATGGCTTGGTGTCAACTGAAATTACA
CCAAAAGCTCCTCCACTATCGACCAAGGAGACTACATCCAATGAGACATT
TGTTGTCACTGAGACTAAGCAAAAACCAACCCAAAATCACACCAGTCAAT
CGCTTCAGACTCCTGGATCTGCTGAAAATATTGATGACCAGTTTATACAG
TCTGGAGCAAACGAGGTGCCAATTACAAACAAAACTTTTGTCGTTGAAGA
GCCATCAAAGATGGAGAAGATGTCAAAAACGTTGGAAATGAACTTCACTA
AAGAAACTCTTGTCGTAGAAAAACCCACAAAGATGTCGAAAACTATGGAA
AAGACCTTCACTAAAGAGACACTGCCTGTAGACGTTTCTTCGCTTGTTGA
GGAACAAGCAAGTTCTTTGGTCTCTCAAGCTATTGCTGAAGCAGATCTAT
CCATTGCTAAAGAGAACCAACCTACCCTTCCTAATGAAGAAACATTGAAG
AACGAAATTGTTCAACAGATCATGAGCCAGTTAGCAGTTTCACAAGCTAA
CACCAATATTGCAGAATCTGTTCCATCTCAACAAAAAGATGAGATTCAAA
GAATGGTGATGAACATGCTCCAGAAATATAATCTACCAACTAAAGAAACA
ATTACACCTGTTGCCACGGCAGACCAAACTGATAGAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040432-exon-sc0002426-1491911889:20847..22835 | TCONS_00040432-exon-sc0002426-1491911889:20847..22835 | Clytia hemisphaerica | exon |
| TCONS_00040432-exon-sc0002426-1510915933:20847..22835 | TCONS_00040432-exon-sc0002426-1510915933:20847..22835 | Clytia hemisphaerica | exon |
| TCONS_00040432-exon-sc0002426-1575043694:20847..22835 | TCONS_00040432-exon-sc0002426-1575043694:20847..22835 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002426 | supercontig | sc0002426:20847..22835 + |
Blast
The following BLAST results are available for this feature:
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