TCONS_00040430 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040430
Unique NameTCONS_00040430
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040430 ID=TCONS_00040430|Name=TCONS_00040430|organism=Clytia hemisphaerica|type=transcript|length=3142bp
TGATCTTTCAAAAGCAATCCAATTTTTATGATTTACTTGTTGCATAAAAA
ATCAACAAATCTCCAACCAAGGCAGAAAAGAGTTAGTTTTGACCATTACA
GGAGTATGAAgatttttgaaaaagacagCCATGAAAAAGACTGAATTCTT
GGATAAGACGTCTCACGCTGAACACGACATGGACCTCACCAGACTAACAG
AACTTTCACCCAGTGGGGATGATTTGAATGaaactcaaaaaattcaaaat
ttctttaaattattttctgATGACAAGCCAACTACAAAAAATGGAATGGA
CACGACTCTTGGGATGCCATCTCTACACAGTGAATCACCACATGTAAACA
ACAATAAAACTATCCTCAATAACTATGACGTTATGGACGAGGCTTCTGAA
ACATTTGTGTCTTTCCCTCTAGGTACGGTCTAAGCTGAAAAAGAAACTAA
AATCTCTTCTGCTGACTTCTTGAGTAATTTTAAATCAACCAATGACAAGT
CACCAAAGAAAGATAGCACTATTAACCAGATCTTGAATGCTATTGACACA
CCACCGGAATCCTCCTTAGTCTCAGGTAAAGACTTTCTTGCAAAGCTCAT
AAGTCATAAGACACCATCAGAAAGCGATGACCCACTTCCAGGGGCGATCG
CTCTTGAACTTAATAACATAACCACATTAAGCGAAGCTTCAATGGATATT
ACAGATGATGAGAACCAAAGAGAACTATGATGTTAAATCAACTTAACATG
TCTGCTGCTATCAGCCCATCCAGTAACACAAAAAATAGCTTGGAAGCTCA
TCAAGAAACTCTCACCAAAGATGATCCTCCTGAAAATCAAACCAACATTG
ACAACAAAAATGTTCAGTTGAcgccaacaaaaacaaactttcgtGACAAA
TTTGCCGACTCAAGTGATTTGGTTACTGTTTGTATCACACCTGATATCGA
GACTGATGCATAGCCTGTAGCCCCTTCTACAGAAACACCCTCGTTCcttg
aagatttcaaaaatatcaatgttgGACCTAAGGCTAACAAGAGTAATGAA
ACCACTGgctcttcctttattatggactTCAAAGGGATGTGTGTGGATAG
CCCTGTAGATAAATCACAAACTGAAATTAGTACTGAAGGACCAAAATCAA
GTACTCAAATACAAAAAGGATTCTCCGCAACTCCAGTAAGCAGCTACAGA
GACTATTGTTCAACTTACGGAAAATCACCAAATATCAGCAATATAACTAA
AATCGCACTTGGAGATTCACCAACTAAAACAATCTCTATTCCAGCAACTC
AGACTCCTATCTTGGTCACACCCAGAAGAAACGCCAAGGAGACTGCCACA
TCCATATCAAATGAAACACCATCTTTATCACATGATAAGCTTGCCCCTAA
GGAAGACATCAACTCAATTTCACAATCACAAAATGTCATCTTGGTAACAC
CAAAACGAAGCGTTTCAAAGAAAAGACCAGAAACAGCACCGGTCAGTGAA
GCCAAGTCGACTGGAATTTCGTTAGGTGAAACCTCCGCTTTCGCATCTGT
ACCCATGAAAAGGATAAAGTTATCAAATGAGGCTGAACCGGTCAAACTAC
CCTCAGTGTCAACCATACTTCCAAGGCTTAACCAAACGTCTCCCAAGAAA
AACTCAATAGCACCTTCCAGCCAAGAGCTGGTGGCAAGCAGTCAATCACC
ACAACTTTGTATCCCGACAACTGCCACACCAAAAGCCAACCCTCTTAAAT
TGCTGATGGAACAAAAAGAGGATGAAAATCCAACAATCAATGATATCAAA
ATGGCGTCCCCTCCAAAACAATTTTCATCAAATCTACCTATACCTTCAAC
TAATACAAACACATCAGTCCAGACCAAGCTCTCGTCTCCGACCAAACCTC
TCCCTATCAACACATTGCCTGGAGGATCACCACCTCAGATACTCAACACA
GACACCATATCTTCAATTCAAAATAAGGATACTAACCCACAAAGCCAATT
CAAAGTCGCTGATGAGAAGAAGGATCCACAGAATCGCAGAAAAACGTACA
CTCTGAGCAAAGACCGAAGGTTGACAATCCAAGATGTGATTCTGGCTGGC
AACGAAAAATNTCACTCTGAGCAAGTCAGACTTACCCTTAGTCACCCCTT
CGTCACCTGAGAAAACCAACGTCACCGAGAAACCGAAGAACGATCGACGG
GTGACATTCGTTATTCCACCGAAACCCTCAACGACCGAACAGTCTCTTAC
TGAACAGTCTTCACTCAACGATAAGCCGAAAAACCAGACAATTGTTCTCG
AGAAAGTCGACCAAAGTGAAAGTAAGAAGACAAAAAGCAACAAAGACCGA
AGGTTGACAATCCAAGATATGATTCTGGCTGGCAACGAAAAATGCATTGA
TGATTCAACCAACTTCGAACAAACTCTTGTGTTTAAACCACCCATTGCTA
ATAGTTCAATGATGGTTTTTCCTTCTGATGGCTTGGTGTCAACTGAAATT
ACACCAAAAGCTCCTCCACTATCGACCAAGGAGACTACATCCAATGAGAC
ATTTGTTGTCACTGAGACTAAGCAAAAACCAACCCAAAATCACACCAGTC
AATCGCTTCAGACTCCTGGATCTGCTGAAAATATTGATGACCAGTTTATA
CAGTCTGGAGCAAACGAGGTGCCAATTACAAACAAAACTTTTGTCGTTGA
AGAGCCATCAAAGATGGAGAAGATGTCAAAAACGTTGGAAATGAACTTCA
CTAAAGAAACTCTTGTCGTAGAAAAACCCACAAAGATGTCGAAAACTATG
GAAAAGACCTTCACTAAAGAGACACTGCCTGTAGACGTTTCTTCGCTTGT
TGAGGAACAAGCAAGTTCTTTGGTCTCTCAAGCTATTGCTGAAGCAGATC
TATCCATTGCTAAAGAGAACCAACCTACCCTTCCTAATGAAGAAACATTG
AAGAACGAAATTGTTCAACAGATCATGAGCCAGTTAGCAGTTTCACAAGC
TAACACCAATATTGCAGAATCTGTTCCATCTCAACAAAAAGATGAGATTC
AAAGAATGGTGATGAACATGCTCCAGAAATATAATCTACCAACTAAAGAA
ACAATTACACCTGTTGCCACGGCAGACCAAACTGATAGAGGT
Run BLAST on NCBI

protein sequence of TCONS_00040430-protein

>TCONS_00040430-protein ID=TCONS_00040430-protein|Name=TCONS_00040430-protein|organism=Clytia hemisphaerica|type=polypeptide|length=362bp
MDFKGMCVDSPVDKSQTEISTEGPKSSTQIQKGFSATPVSSYRDYCSTYG
KSPNISNITKIALGDSPTKTISIPATQTPILVTPRRNAKETATSISNETP
SLSHDKLAPKEDINSISQSQNVILVTPKRSVSKKRPETAPVSEAKSTGIS
LGETSAFASVPMKRIKLSNEAEPVKLPSVSTILPRLNQTSPKKNSIAPSS
QELVASSQSPQLCIPTTATPKANPLKLLMEQKEDENPTINDIKMASPPKQ
FSSNLPIPSTNTNTSVQTKLSSPTKPLPINTLPGGSPPQILNTDTISSIQ
NKDTNPQSQFKVADEKKDPQNRRKTYTLSKDRRLTIQDVILAGNEKXHSE
QVRLTLSHPFVT
Run BLAST on NCBI

transcript from alignment at sc0002426:14644..22835+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040430 ID=TCONS_00040430|Name=TCONS_00040430|organism=Clytia hemisphaerica|type=transcript|length=8192bp|location=Sequence derived from alignment at sc0002426:14644..22835+ (Clytia hemisphaerica)
TGATCTTTCAAAAGCAATCCAATTTTTATGATTTACTTGTTGCATAAAAA
GTATAGATATTTGTTTTAATTCTTAAATTCAACACTTTTAACCTCGAAGC
AATTCAGACCTCAATTCAATGTTTTACCTGGCTTTTAAGGTAATAAAAta
atgtcatttttcattttttgtgaagtAAAGCAATGGTTTTTCATATTAta
tagaccagcgtccgagattcaaaaaaggccttaaaaatggttttcgtagg
gcaccccttagatctaaatctcgagatattttggtttaaatattgaaaat
tatcgatattttttgctgagtcagcagtttttcagcatatttatccACCT
TAAAAGTGAATTANTCATTTTTCCTTGTCAACATCAATTTTCAGGTACAT
ATAGGTCCATTCAACATGTAGCTTGTTTTTCTTATTTGTTTTGTCCATCC
ATTTTAGAGCGCGCTCAAGAAGAGCATCTCGTAGACGTAGTGTAAGttct
tttctattcaatttttttctgatttattaGATTTTTTACACAATATACTT
CTAAATTAGGAGAGAACGAAGGAAGTGACAAaatcaaacttaaaattttt
ctttttactttgttaGACCTGAGACTTTGATTGCTTTGTTTTAGTGCTAC
ACCTACTCTGTCAGCGCTCAGTTACCTATTGCCTANcaaaacgtcgattt
ttcgccttaaaaatgccatttctcggcactaggtggtcgaaacttaacaa
ataaccccattttctttatctacttttcacgctgaatccgttggtagtct
cagatatttgattttcagacttcaaaAANATTGCCTATCCAAGCTACTCG
TTCTCTGATTTATGGAACCTAACACCTTTGAATTGAAAGATGAAGGCTCT
ACCAATTTGTATAATATACATTTTAGATCTGAGTCAGTCTATTATATAAA
ACTATCTTTGATTTTTGTAGTGTTTGAAGACAATTGTTGGAAATCAACAG
GtaatgtttgatttttcgcCGTTTctatttgacttttaatataaccATAC
TTGGTTTGGGCTATACATGCCTCCTTTTCATGAGATAAATTAGAAGATTT
GCAGCATAATACATTCTAATAGCAACATTTTGCTAATGTTGTAGTCGAAG
ttctataaaaataaaatatNGGTCTGTATATTATCTTTATCCATAGATCA
ACAAATCTCCAACCAAGGCAGAAAAGAGTTAGTTTTGACCATTACAGGAG
TATGAAGTAAGCTATATTCATTCAACCCTGGTTCCCTCAGAAGAGTTCAT
TTACAATGCTAAATGGAacttgaaaagttttgtttcatGACAGTTGAGGG
AAAATATTTCTTGAGCAGTCCTGTGCGATATATTATAAAGACCGCTCTGG
TCTgcattttattcattttgtatAGAGCCTTATATCGAAAGATCAGTTTT
TACATCAGACTTCGTGCAGTAAAAATGCCACTTTGTTACATCCTGAAtag
gtttttccaaaaaaacttcacttttcaactttttattataatatctagca
actttgagaaaatgttttttcgtgTCATGTTTCTATTCTTATTTCCTGTA
GCTTGCATTTGTTACAGTTACTTTAACTAATTTTTTCCAATTATTTacag
gatttttgaaaaagacagCCATGAAAAAGGTGTGTCTCGGTTTTTCATTT
CAAGTGCTGGATTTTTCTTTTACTCtcacagggctgcaaataaatatttt
tagtcaatcggacatcatgtccgacagaaatgaaatcctgtcggtcaaac
tcaaaatcctgtcggtcattcaatgtataaatttttttaagttacagaga
aagcgagtaggaaaaataaaagtgatcttagaaacacccttggaagttac
gaagaaagcaagttgataaaagttaacttagaaacactcttaaaagtttt
aagaagaaagcgagttgataaaagttaacttagaaacactcttgaaagtt
atgaagtaagcacaagttgatgaaaatggtcttaaaaaaactcttgaaag
ttacaaagaaagcgaattgataaagtgatcttagaaacaaagaaggttac
gaagaaagcaagttgacaaaagtaatttagaaacacccttaaataagtta
caaagaaagcgggttgataaaagtgatcttagaaacaaagaaagtaacga
agaaagcaagtcgataaaagttaacttagaaacaccctgaaagctacaaa
ggaagcgagtattaaaagaataggctaagtaagagacaggggtgtaagag
atttattttcaactcttaagttaatggtttattccttttttcactcggac
atcatgaccgacacaaaagattttcagtcggtcaaatagctttttcagtc
ggacattgaccgatgaccgacgcttatttgcagccctgctctcaggtacc
taatagccgtccccccaattaattttttgaaaattatccacccaggacat
tcttattccaacccccgctaattaatttttgggaaaatgtttttgaaagt
tccctcttttgtcctaatttttGCTGTATTAGActccttttaaaattttc
caccctgaacatttttattctaaaaagGGGGCCGCCCTGCccgcttctta
aattttgatacaaccccccccccccggctattcgATTACTGTGAGTACCT
CTGCTTTTTTTTAAGACTTACTACTTTAACTGGATTAAATTTNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNgagggctaataatcaaactgcaagggca
gaattaatgacaacaacgaacgaaaacttaacgctattactattacaATC
CATATctgacattcaaacaacgtttttctAGCGTCAGTTAAGTCTTTTtg
cttcaatgcaatgtcttcaacaagttttgagtacccttgcgagcaggccg
caaatgaccaaaaagtgtttttttctgacgtcggtttagtctcaccgctt
caatgcaacgacttcaataaagttccgagcgggccgcaaatgccgcaaat
gacgttatcgccctataaccagggcggttaatgatatttcagccctctat
AGTGCGACGCCTTATttttctcagcgcgggtatgactatttgagtcatag
aacccttcaataccgcccgccattcgaatctttaatggcttacttaatga
ccgctatatggataataatagccattttttgccataaatggagacttgga
actagtttctcccccaaaaatacaattttaaaagttttgtggtggattta
atttcgcgaatcaggaatctcacgcgtgttcgcgagttttaatttcgcaa
aaatgggaaaaattcgcgaaatcgcgaaatttaatctcgcgaaaattaat
ctgaTTAAAGTACCCATTAATTCAATTTGAGGAACCGTTAGCAATAGATT
TAGTTTTTTATATCATactcaataaaaattcaaaacaaactaaACAATTT
TCCATCATCAAGCTAAAAACATACTTTAGGCTATGTCatatctttctttg
ttttgagcGGCCGTATCCTACAAGTAGGTGAAATCTCGGTGGGGTGACTA
GTGGCCAACccatagcagtgcctatagaccaagagtaaggcctaaaagcc
tggaactgtctattgtgtagactaacaCACCTGAACTAATTGACAattgt
tgttttgtttacttttagaTGAAGAGGATGAAAAGGTGAGTTTACAACCC
TTCTGTGCTCATCCCTGAACCTCAATATTACTATTTCCGCAACACGTACA
GGTGTATCAGAAATTGATTTCTACTTGTGTTTCTCTATTTTCGTTTGTCA
GCTTGACGTAGTATTTCCTTTATAATTTTATAACTCTTTCTAGGTTTATT
CAGACTTCAGACTATAATGGATATGTCTTGTGTTTAAGCAAAAGGTCTTT
GTCTAGGGTTGaagattattttgataattgcccctttttttaaatgctCC
CCCCCCCTCGAGTAAACACTCCTACTgcctaaaatccaaaaaaaggtGAA
CTccagggcgtttattcgaagtgatATGGTATATAATTTGTTAGAAGGAG
TGACCTATAGTAGGGTTGAtaaagaatgaatgaataaatgatTACTGGTT
CATTTTTATCTCCTTATTATTGTTTTTTCTCATAGACTGAATTCTTGGAT
AAGACGTCTCACGCTGAACACGACATGGACCTCACCAGACTAACAGAACT
TTCACCCAGTGGGGATGATTTGAATGaaactcaaaaaattcaaaatttct
ttaaattattttctgATGACAAGCCAACTACAAAAAATGGAATGGACACG
ACTCTTGGGATGCCATCTCTACACAGTGAATCACCACATGTAAACAACAA
TAAAACTATCCTCAATAACTATGACGTTATGGACGAGGCTTCTGAAACAT
TTGTGTCTTTCCCTCTAGGTACGGTCTAAGCTGAAAAAGAAACTAAAATC
TCTTCTGCTGACTTCTTGAGTAATTTTAAATCAACCAATGACAAGTCACC
AAAGAAAGATAGCACTATTAACCAGATCTTGAATGCTATTGACACACCAC
CGGAATCCTCCTTAGTCTCAGGTAAAGACTTTCTTGCAAAGCTCATAAGT
CATAAGACACCATCAGAAAGCGATGACCCACTTCCAGGGGCGATCGCTCT
TGAACTTAATAACATAACCACATTAAGCGAAGCTTCAATGGATATTACAG
ATGATGAGAACCAAAGAGAACTATGATGTTAAATCAACTTAACATGTCTG
CTGCTATCAGCCCATCCAGTAACACAAAAAATAGCTTGGAAGCTCATCAA
GAAACTCTCACCAAAGATGATCCTCCTGAAAATCAAACCAACATTGACAA
CAAAAATGTTCAGTTGAcgccaacaaaaacaaactttcgtGACAAATTTG
CCGACTCAAGTGATTTGGTTACTGTTTGTATCACACCTGATATCGAGACT
GATGCATAGCCTGTAGCCCCTTCTACAGAAACACCCTCGTTCcttgaaga
tttcaaaaatatcaatgttgGACCTAAGGCTAACAAGAGTAATGAAACCA
CTGgctcttcctttattatggactTCAAAGGGATGTGTGTGGATAGCCCT
GTAGATAAATCACAAACTGAAATTAGTACTGAAGGACCAAAATCAAGTAC
TCAAATACAAAAAGGATTCTCCGCAACTCCAGTAAGCAGCTACAGAGACT
ATTGTTCAACTTACGGAAAATCACCAAATATCAGCAATATAACTAAAATC
GCACTTGGAGATTCACCAACTAAAACAATCTCTATTCCAGCAACTCAGAC
TCCTATCTTGGTCACACCCAGAAGAAACGCCAAGGAGACTGCCACATCCA
TATCAAATGAAACACCATCTTTATCACATGATAAGCTTGCCCCTAAGGAA
GACATCCACTCAATTTCAcaattagtagggggaaatttgttcgttttttt
gaggtcgctcgacttttttagtcaaagcacttgttatacatttttggaaa
gctaaggggtaggggaatcaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNCTCAAATACAAAAAGGATTCTCCGCAACTCCAGTAAGCAGCTACAGA
GACTATTGTTCAACTTTTGGAAAATCACCAAACATCAGCAATATAACTAA
AATCGCACTTGGTGATTCACCAACTAAAACAATCTCTATTCCAGCAACTC
AGACTCCTATCTTGGTCACACCCAGAAGAAACGCCAAGGAGACTGCCACA
TCCATATCAAATGAAACACCATCTTTATCACATGATAAGCTTGCCCCTAA
TGAAGACATCAACTCAATTTCACAATCACAAAATGTCATCTTGGTAACAC
CAAAACGAAGCGTTTCAAAGAAAAGACCAGAAACAGCACCGGTCAGTGAA
GCCAAGTCGACTGGAATTTCGTTAGGTGAAACCTCCGCTTTCGCATCTGT
ACCCATGAAAAGGATAAAGTTATCAAATGAGGCTGAACCGGTCAAACTAC
CCTCAGTGTCAACCATACTTCCAAGGCTTAACCAAACGTCTCCCAAGAAA
AACTCAATAGCACCTTCCAGCCAAGAGCTGGTGGCAAGCAGTCAATCACC
ACAACTTTGTATCCCGACAACTGCCACACCAAAAGCCAACCCTCTTAAAT
TGCTGATGGAACAAAAAGAGGATGAAAATCCAACAATCAATGATATCAAA
ATGGCGTCCCCTCCAAAACAATTTTCATCAAATCTACCTATACCTTCAAC
TAATACAAACACATCAGTCCAGACCAAGCTCTCGTCTCCGACCAAACCTC
TCCCTATCAACACATTGCCTGGAGGATCACCACCTCAGATACTCAACACA
GACACCATATCTTCAATTCAAAATAAGGATACTAACCCACAAAGCCAATT
CAAAGTCGCTGATGAGAAGAAGGATCCACAGAATCGCAGAAAAACGTACA
CTCTGAGCAAAGACCGAAGGTTGACAATCCAAGATGTGATTCTGGCTGGC
AACGAAAAATNTCACTCTGAGCAAGTCAGACTTACCCTTAGTCACCCCTT
CGTCACCTGAGAAAACCAACGTCACCGAGAAACCGAAGAACGATCGACGG
GTGACATTCGTTATTCCACCGAAACCCTCAACGACCGAACAGTCTCTTAC
TGAACAGTCTTCACTCAACGATAAGCCGAAAAACCAGACAATTGTTCTCG
AGAAAGTCGACCAAAGTGAAAGTAAGAAGACAAAAAGCAACAAAGACCGA
AGGTTGACAATCCAAGATATGATTCTGGCTGGCAACGAAAAATGCATTGA
TGATTCAACCAACTTCGAACAAACTCTTGTGTTTAAACCACCCATTGCTA
ATAGTTCAATGATGGTTTTTCCTTCTGATGGCTTGGTGTCAACTGAAATT
ACACCAAAAGCTCCTCCACTATCGACCAAGGAGACTACATCCAATGAGAC
ATTTGTTGTCACTGAGACTAAGCAAAAACCAACCCAAAATCACACCAGTC
AATCGCTTCAGACTCCTGGATCTGCTGAAAATATTGATGACCAGTTTATA
CAGTCTGGAGCAAACGAGGTGCCAATTACAAACAAAACTTTTGTCGTTGA
AGAGCCATCAAAGATGGAGAAGATGTCAAAAACGTTGGAAATGAACTTCA
CTAAAGAAACTCTTGTCGTAGAAAAACCCACAAAGATGTCGAAAACTATG
GAAAAGACCTTCACTAAAGAGACACTGCCTGTAGACGTTTCTTCGCTTGT
TGAGGAACAAGCAAGTTCTTTGGTCTCTCAAGCTATTGCTGAAGCAGATC
TATCCATTGCTAAAGAGAACCAACCTACCCTTCCTAATGAAGAAACATTG
AAGAACGAAATTGTTCAACAGATCATGAGCCAGTTAGCAGTTTCACAAGC
TAACACCAATATTGCAGAATCTGTTCCATCTCAACAAAAAGATGAGATTC
AAAGAATGGTGATGAACATGCTCCAGAAATATAATCTACCAACTAAAGAA
ACAATTACACCTGTTGCCACGGCAGACCAAACTGATAGAGGT

Coding sequence (CDS) from alignment at sc0002426:14644..22835+

>TCONS_00040430 ID=TCONS_00040430|Name=TCONS_00040430|organism=Clytia hemisphaerica|type=CDS|length=2178bp|location=Sequence derived from alignment at sc0002426:14644..22835+ (Clytia hemisphaerica)
atggactTCAAAGGGATGTGTGTGGATAGCCCTGTAGATAAATCACAAAC
TGAAATTAGTACTGAAGGACCAAAATCAAGTACTCAAATACAAAAAGGAT
TCTCCGCAACTCCAGTAAGCAGCTACAGAGACTATTGTTCAACTTACGGA
AAATCACCAAATATCAGCAATATAACTAAAATCGCACTTGGAGATTCACC
AACTAAAACAATCTCTATTCCAGCAACTCAGACTCCTATCTTGGTCACAC
CCAGAAGAAACGCCAAGGAGACTGCCACATCCATATCAAATGAAACACCA
TCTTTATCACATGATAAGCTTGCCCCTAAGGAAGACATCAACTCAATTTC
ACAATCACAAAATGTCATCTTGGTAACACCAAAACGAAGCGTTTCAAAGA
AAAGACCAGAAACAGCACCGGTCAGTGAAGCCAAGTCGACTGGAATTTCG
TTAGGTGAAACCTCCGCTTTCGCATCTGTACCCATGAAAAGGATAAAGTT
ATCAAATGAGGCTGAACCGGTCAAACTACCCTCAGTGTCAACCATACTTC
CAAGGCTTAACCAAACGTCTCCCAAGAAAAACTCAATAGCACCTTCCAGC
CAAGAGCTGGTGGCAAGCAGTCAATCACCACAACTTTGTATCCCGACAAC
TGCCACACCAAAAGCCAACCCTCTTAAATTGCTGATGGAACAAAAAGAGG
ATGAAAATCCAACAATCAATGATATCAAAATGGCGTCCCCTCCAAAACAA
TTTTCATCAAATCTACCTATACCTTCAACTAATACAAACACATCAGTCCA
GACCAAGCTCTCGTCTCCGACCAAACCTCTCCCTATCAACACATTGCCTG
GAGGATCACCACCTCAGATACTCAACACAGACACCATATCTTCAATTCAA
AATAAGGATACTAACCCACAAAGCCAATTCAAAGTCGCTGATGAGAAGAA
GGATCCACAGAATCGCAGAAAAACGTACACTCTGAGCAAAGACCGAAGGT
TGACAATCCAAGATGTGATTCTGGCTGGCAACGAAAAATNTCACTCTGAG
CAAGTCAGACTTACCCTTAGTCACCCCTTCGTCACCTGAatggactTCAA
AGGGATGTGTGTGGATAGCCCTGTAGATAAATCACAAACTGAAATTAGTA
CTGAAGGACCAAAATCAAGTACTCAAATACAAAAAGGATTCTCCGCAACT
CCAGTAAGCAGCTACAGAGACTATTGTTCAACTTACGGAAAATCACCAAA
TATCAGCAATATAACTAAAATCGCACTTGGAGATTCACCAACTAAAACAA
TCTCTATTCCAGCAACTCAGACTCCTATCTTGGTCACACCCAGAAGAAAC
GCCAAGGAGACTGCCACATCCATATCAAATGAAACACCATCTTTATCACA
TGATAAGCTTGCCCCTAAGGAAGACATCAACTCAATTTCACAATCACAAA
ATGTCATCTTGGTAACACCAAAACGAAGCGTTTCAAAGAAAAGACCAGAA
ACAGCACCGGTCAGTGAAGCCAAGTCGACTGGAATTTCGTTAGGTGAAAC
CTCCGCTTTCGCATCTGTACCCATGAAAAGGATAAAGTTATCAAATGAGG
CTGAACCGGTCAAACTACCCTCAGTGTCAACCATACTTCCAAGGCTTAAC
CAAACGTCTCCCAAGAAAAACTCAATAGCACCTTCCAGCCAAGAGCTGGT
GGCAAGCAGTCAATCACCACAACTTTGTATCCCGACAACTGCCACACCAA
AAGCCAACCCTCTTAAATTGCTGATGGAACAAAAAGAGGATGAAAATCCA
ACAATCAATGATATCAAAATGGCGTCCCCTCCAAAACAATTTTCATCAAA
TCTACCTATACCTTCAACTAATACAAACACATCAGTCCAGACCAAGCTCT
CGTCTCCGACCAAACCTCTCCCTATCAACACATTGCCTGGAGGATCACCA
CCTCAGATACTCAACACAGACACCATATCTTCAATTCAAAATAAGGATAC
TAACCCACAAAGCCAATTCAAAGTCGCTGATGAGAAGAAGGATCCACAGA
ATCGCAGAAAAACGTACACTCTGAGCAAAGACCGAAGGTTGACAATCCAA
GATGTGATTCTGGCTGGCAACGAAAAATNTCACTCTGAGCAAGTCAGACT
TACCCTTAGTCACCCCTTCGTCACCTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024580XLOC_024580Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040430-proteinTCONS_00040430-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040430-exon-sc0002426-1491911889:14644..14693TCONS_00040430-exon-sc0002426-1491911889:14644..14693Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1510915933:14644..14693TCONS_00040430-exon-sc0002426-1510915933:14644..14693Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1575043694:14644..14693TCONS_00040430-exon-sc0002426-1575043694:14644..14693Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1491911889:15840..15899TCONS_00040430-exon-sc0002426-1491911889:15840..15899Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1510915933:15840..15899TCONS_00040430-exon-sc0002426-1510915933:15840..15899Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1575043694:15840..15899TCONS_00040430-exon-sc0002426-1575043694:15840..15899Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1491911889:16294..16322TCONS_00040430-exon-sc0002426-1491911889:16294..16322Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1510915933:16294..16322TCONS_00040430-exon-sc0002426-1510915933:16294..16322Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1575043694:16294..16322TCONS_00040430-exon-sc0002426-1575043694:16294..16322Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1491911889:19179..20446TCONS_00040430-exon-sc0002426-1491911889:19179..20446Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1510915933:19179..20446TCONS_00040430-exon-sc0002426-1510915933:19179..20446Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1575043694:19179..20446TCONS_00040430-exon-sc0002426-1575043694:19179..20446Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1491911889:21101..22835TCONS_00040430-exon-sc0002426-1491911889:21101..22835Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1510915933:21101..22835TCONS_00040430-exon-sc0002426-1510915933:21101..22835Clytia hemisphaericaexon
TCONS_00040430-exon-sc0002426-1575043694:21101..22835TCONS_00040430-exon-sc0002426-1575043694:21101..22835Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002426supercontigsc0002426:14644..22835 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.26466	2.96816	3.09997	3.2679	29.609	22.8598	12.4434	15.1371	2.92567	3.92072	3.12682	3.57564	1.94779	1.73758	0.613955	0.756646	3.52916	2.05132	1.07426	0.817506	2.20539	1.39429	1.46941	2.18874	9.18667	7.36265	0.361112	0.348072	0.677036	1.12511
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040430 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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