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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040426 ID=TCONS_00040426|Name=TCONS_00040426|organism=Clytia hemisphaerica|type=transcript|length=1251bp
caACTGATTTAAGACACCCACTCGAGTCTATGGCGATACGATTTTATACT
GTGGAAAATAGAAACAAAACAGactcttttaataaaatgtaaGAATTAGC
CTTGCATGATCAAACCAGGAGACATATCTTACTTCATTAGGATTAGTAAG
TATTGAACTCCTTTGTAGAATTGAAAGGAGCAATAAAATATATACATGAG
CTTTTTTGGAACCAAGGACACTGATATTCGGAAAAGTTGTATTATATTGC
ATTCAGGATTTTGGTATGGAATGGAACTGGGGATTGGAAAGTTGCGTTTG
AGTATTTATAGGATTATATGTTTGAATGGCTCAGCGTGGAAAGAATGACA
TGACTTCAATCAATTGGATTTCATGTTCTGGTTATGATAAAATGAAATTC
GGTTATTAATGGAAAGCTCCGCATGTtgagaagaaaaggaaaaagtcTAT
TATGGAATTAAATATACTAATAGTTGAAcatgcgcaacgcactgggctca
acttcagtggcttcaaactattcatagatccaattgtagacccccagata
ttcacccaaggaacaagtgtgccaaatttcagccaaatcagaccattttt
gaagtctccaggctgccccaaagttttagcctcgatttgacaaaaaactc
gtccccaggccccaaaaatcgaaattttcaaaaaataaaaaacatcccca
gatattcacccaaggaacaagtgtgccaaatttcggCCAAacccaaccat
ttttgaagtctccaggctgccctaaagtttttgtgaccgacagacacaca
cacagacagacatcgtcagattgtagctcaactgaagttgagaatggAGA
AGAAATTGTATTAATTGTTGAAGTACAAACCCATCATTTCGGCAAAGACA
TGAGTAAACTTGACTCTTAATAGTTCTGTTCGGAGAGTTTTAAGATCACT
AGAATAATCACAGAACCTTTGAAATACATCTTTTGCCAGTTCAAATGATC
AGATTTGGTTTTGTAATCTAAATCAACTGTATCACTTCCATTAGAAGATT
AGAAAACCTTCAATACTGTCTTTTCGTTGGATCGCAAAAATGACATAAAT
CGATTTCTATTTGACGTGCTGATTTTGGGCTATCGAGAGCATGATCAAAA
TATTCTTCAATAGAGCTGTTATCTACCGTAATATAACCAATCTGCCTGAG
ATCACCAGGAACGAGACAAGCAACAAAGTAAACTAAAAAATTTAACCTTC
C Run BLAST on NCBI transcript from alignment at sc0002424:8560..9810 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040426 ID=TCONS_00040426|Name=TCONS_00040426|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at sc0002424:8560..9810 (Clytia hemisphaerica)
GGAAGGTTAAATTTTTTAGTTTACTTTGTTGCTTGTCTCGTTCCTGGTGA
TCTCAGGCAGATTGGTTATATTACGGTAGATAACAGCTCTATTGAAGAAT
ATTTTGATCATGCTCTCGATAGCCCAAAATCAGCACGTCAAATAGAAATC
GATTTATGTCATTTTTGCGATCCAACGAAAAGACAGTATTGAAGGTTTTC
TAATCTTCTAATGGAAGTGATACAGTTGATTTAGATTACAAAACCAAATC
TGATCATTTGAACTGGCAAAAGATGTATTTCAAAGGTTCTGTGATTATTC
TAGTGATCTTAAAACTCTCCGAACAGAACTATTAAGAGTCAAGTTTACTC
ATGTCTTTGCCGAAATGATGGGTTTGTACTTCAACAATTAATACAATTTC
TTCTccattctcaacttcagttgagctacaatctgacgatgtctgtctgt
gtgtgtgtctgtcggtcacaaaaactttagggcagcctggagacttcaaa
aatggttgggtTTGGccgaaatttggcacacttgttccttgggtgaatat
ctggggatgttttttattttttgaaaatttcgatttttggggcctgggga
cgagttttttgtcaaatcgaggctaaaactttggggcagcctggagactt
caaaaatggtctgatttggctgaaatttggcacacttgttccttgggtga
atatctgggggtctacaattggatctatgaatagtttgaagccactgaag
ttgagcccagtgcgttgcgcatgTTCAACTATTAGTATATTTAATTCCAT
AATAgactttttccttttcttctcaACATGCGGAGCTTTCCATTAATAAC
CGAATTTCATTTTATCATAACCAGAACATGAAATCCAATTGATTGAAGTC
ATGTCATTCTTTCCACGCTGAGCCATTCAAACATATAATCCTATAAATAC
TCAAACGCAACTTTCCAATCCCCAGTTCCATTCCATACCAAAATCCTGAA
TGCAATATAATACAACTTTTCCGAATATCAGTGTCCTTGGTTCCAAAAAA
GCTCATGTATATATTTTATTGCTCCTTTCAATTCTACAAAGGAGTTCAAT
ACTTACTAATCCTAATGAAGTAAGATATGTCTCCTGGTTTGATCATGCAA
GGCTAATTCttacattttattaaaagagtCTGTTTTGTTTCTATTTTCCA
CAGTATAAAATCGTATCGCCATAGACTCGAGTGGGTGTCTTAAATCAGTt
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040426-exon-sc0002424-1491911889:8560..9810 | TCONS_00040426-exon-sc0002424-1491911889:8560..9810 | Clytia hemisphaerica | exon |
| TCONS_00040426-exon-sc0002424-1510915933:8560..9810 | TCONS_00040426-exon-sc0002424-1510915933:8560..9810 | Clytia hemisphaerica | exon |
| TCONS_00040426-exon-sc0002424-1575043694:8560..9810 | TCONS_00040426-exon-sc0002424-1575043694:8560..9810 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002424 | supercontig | sc0002424:8560..9810 . |
Blast
The following BLAST results are available for this feature:
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