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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040424 ID=TCONS_00040424|Name=TCONS_00040424|organism=Clytia hemisphaerica|type=transcript|length=761bp
TCAtatgctacctaaattgtgcagactaccgggctaccttaatggagcag
cccgtttgtttctacaaaaccttagaaagataacagtaacattggcaagt
cagtgtggaaacaatttgttCTCAtatgctacctaaattgtgcagactac
cgggctaccttaatggagcagCCCGTTTGTTTccacaaaaccttagaaag
ataacagtaacattggcaagtcagtgtggaaacaatttgtagtcatgtgc
tacctaaattgtgcagactaccgggctaccttaatggaaagGCCCGTTTG
CTTCTACAATAAACCTTGAAtactattttggactttttttctGGTACAAA
CCATTTATATTGAAATCAATActcttcttatttttttttcaggaaaatga
aGTGCAAACCCGGAAGGGAAACGTAATCTACATGTCTACATCTCTACAAG
TCGTCTTCAAAAGGAGACTGATCAACCGAACGCAAGAAAGAAAGAACATT
TTGCCTGAGATGCCAAGACTAATGGTAGAATTTAGGACATGGAAATCGTT
TATCGTGTACGGTAGCAAGATTTTGACGGTGGAGCTGCTTCCACTCCGTT
TCTTATGTTTGATGGTTTTGTTTTACTTGCTCCACGAATACTATCCAACA
GACAGAGCTAATTACCTGCATGCATGACAATCTAGCACCGGATCGTCTTC
AAAGACACTTGTTGTAAAGATTCTCATTACGAAAGCTTTAATAATGCAGT
AAAAGGACTTN Run BLAST on NCBI transcript from alignment at sc0002424:16288..17224- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040424 ID=TCONS_00040424|Name=TCONS_00040424|organism=Clytia hemisphaerica|type=transcript|length=937bp|location=Sequence derived from alignment at sc0002424:16288..17224- (Clytia hemisphaerica)
TCATATGCTACCTAAATTGTGCAGACTACCGGGCTACCTTAATGGAGCAG
CCCGTTTGTTTCTACAAAACCTTAGAAAGATAACAGTAACATTGGCAAGT
CAGTGTGGAAACAATTTGTTCTCATATGCTACCTAAATTGTGCAGACTAC
CGGGCTACCTTAATGGAGCAGCCCGTTTGTTTCCACAAAACCTTAGAAAG
ATAACAGTAACATTGGCAAGTCAGTGTGGAAACAATTTGTAGTCATGTGC
TACCTAAATTGTGCAGACTACCGGGCTACCTTAATGGAAAGGCCCGTTTG
CTTCTACAATAAACCTTGAATACTATTTTGGACTTTTTTTCTGGTACAAA
CCATTTATATTGAAATCAATACTCTTCTTATTTTTTTTTCAGGAAAATGA
AGTGCAAACCCGGAAGGGAAACGTAATCTACATGTCTACATCTCTACAAG
TCGTCTTCAAAAGGTGAGAAAATTTCAGTAATTGTTTACCAAGCACCTTC
AATATTTGCGTCTTCATTACTCCTAAGTACAAAATCTCTTCAGAGTCATT
TAGCAAACGTAGGTGGAAAGAAGCACTTACTTATCTTTGAGCTATGTTGG
CTTGTGAAGTCTAATATATTCTAATTTCCTTTTCTACAGGAGACTGATCA
ACCGAACGCAAGAAAGAAAGAACATTTTGCCTGAGATGCCAAGACTAATG
GTAGAATTTAGGACATGGAAATCGTTTATCGTGTACGGTAGCAAGATTTT
GACGGTGGAGCTGCTTCCACTCCGTTTCTTATGTTTGATGGTTTTGTTTT
ACTTGCTCCACGAATACTATCCAACAGACAGAGCTAATTACCTGCATGCA
TGACAATCTAGCACCGGATCGTCTTCAAAGACACTTGTTGTAAAGATTCT
CATTACGAAAGCTTTAATAATGCAGTAAAAGGACTTN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040424-exon-sc0002424-1575043694:16762..17224 | TCONS_00040424-exon-sc0002424-1575043694:16762..17224 | Clytia hemisphaerica | exon |
| TCONS_00040424-exon-sc0002424-1575043694:16288..16585 | TCONS_00040424-exon-sc0002424-1575043694:16288..16585 | Clytia hemisphaerica | exon |
| TCONS_00040424-exon-sc0002424-1510915933:16762..17224 | TCONS_00040424-exon-sc0002424-1510915933:16762..17224 | Clytia hemisphaerica | exon |
| TCONS_00040424-exon-sc0002424-1510915933:16288..16585 | TCONS_00040424-exon-sc0002424-1510915933:16288..16585 | Clytia hemisphaerica | exon |
| TCONS_00040424-exon-sc0002424-1491911889:16762..17224 | TCONS_00040424-exon-sc0002424-1491911889:16762..17224 | Clytia hemisphaerica | exon |
| TCONS_00040424-exon-sc0002424-1491911889:16288..16585 | TCONS_00040424-exon-sc0002424-1491911889:16288..16585 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002424 | supercontig | sc0002424:16288..17224 - |
Blast
The following BLAST results are available for this feature:
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