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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040221 ID=TCONS_00040221|Name=TCONS_00040221|organism=Clytia hemisphaerica|type=transcript|length=542bp
TTTTAGAAGATTTTATTCTCACTTATTGAAAATTGTCaaacaatgaaatt
aatttattctgattttatttttttagatgagaaaattcttttttgtccAG
TTTGTTGTCCACTTTTGTGTCGCCCCTCAAAATTCAGGAAGTGTTTGCTG
CAGAATCGGAAGAAGTGAAAGAAAGTACTGTCTAAGGAGATTCAATTGGC
GGAAGATAATGTTTCCATTCATCCAACTCTTCTTGAAACTGTCCAGTCAC
GGAGCTTTGCTCTTCCTATCATTCATCAGCCACGACCCCAAAAACGAGAA
AAATCAACATTGAACTGGTACCGGTACGTTTCCATGGATGTCTTATTCAT
GCATGGTGTCTCTAGGTCTTTACTCTGAGTGTCCTTTTTGACATGACTTA
TAATGATTGAAATGAATAATCCATCAGATACATCACCCCGGCTTCGATAT
TACGGGCTGAACTGATCTGTTTAAAACCATATCATCAAATGAACTAAAAG
CTGCTCCTAAAAAGATTGGCAGCCTGCACATTTCGATAAAAA Run BLAST on NCBI transcript from alignment at sc0002353:3845..4796- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040221 ID=TCONS_00040221|Name=TCONS_00040221|organism=Clytia hemisphaerica|type=transcript|length=952bp|location=Sequence derived from alignment at sc0002353:3845..4796- (Clytia hemisphaerica)
TTTTAGAAGATTTTATTCTCACTTATTGAAAATTGTCAAACAATGAAATT
AATTTATTCTGATTTTATTTTTTTAGATGAGAAAATTCTTTTTTGTCCAG
TTTGTTGTCCACTTTTGTGTCGCCCCTCAAAATTCAGGAAGTGTTTGCTG
CAGAATCGGAAGAAGTGAAAGAAAGTACTGTCTAAGGGTAAGGAATTAAT
TTTACAAAATTTCTTGTGCTGTAAAGGAAACAAATTAATTACAATATTTT
GTTCATACTTCTCTCATGAAATCAATCTAGATGAATTCTGCATAACGGGC
TAAGATTCATCATATTTGAATGCTTTCAAAGGTCTGAAACGTTTAATTGA
CTCTAAAATCTTTCGTCTTCGGACAATTGGACGCAATTTTCTGTTAAGGT
TGATAGGTGTATGAGAAATTTCACGATCGCAATGAATCTCGCTCATACTT
CATATTGATTTAACGATTTGAAAGTCATCAACAGTGAATTTGCTATTACA
GAGCAACTAGTTTCCAGACTAGTTTCCGTCCCCCCTAATTTATTGATTCG
TTCAATTCTTTTTTGATAATCAATTTTGCTCTTACCCATATATATAGAGA
TTCAATTGGCGGAAGATAATGTTTCCATTCATCCAACTCTTCTTGAAACT
GTCCAGTCACGGAGCTTTGCTCTTCCTATCATTCATCAGCCACGACCCCA
AAAACGAGAAAAATCAACATTGAACTGGTACCGGTACGTTTCCATGGATG
TCTTATTCATGCATGGTGTCTCTAGGTCTTTACTCTGAGTGTCCTTTTTG
ACATGACTTATAATGATTGAAATGAATAATCCATCAGATACATCACCCCG
GCTTCGATATTACGGGCTGAACTGATCTGTTTAAAACCATATCATCAAAT
GAACTAAAAGCTGCTCCTAAAAAGATTGGCAGCCTGCACATTTCGATAAA
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040221-exon-sc0002353-1575043694:4610..4796 | TCONS_00040221-exon-sc0002353-1575043694:4610..4796 | Clytia hemisphaerica | exon |
| TCONS_00040221-exon-sc0002353-1575043694:3845..4199 | TCONS_00040221-exon-sc0002353-1575043694:3845..4199 | Clytia hemisphaerica | exon |
| TCONS_00040221-exon-sc0002353-1510915933:4610..4796 | TCONS_00040221-exon-sc0002353-1510915933:4610..4796 | Clytia hemisphaerica | exon |
| TCONS_00040221-exon-sc0002353-1510915933:3845..4199 | TCONS_00040221-exon-sc0002353-1510915933:3845..4199 | Clytia hemisphaerica | exon |
| TCONS_00040221-exon-sc0002353-1491911889:4610..4796 | TCONS_00040221-exon-sc0002353-1491911889:4610..4796 | Clytia hemisphaerica | exon |
| TCONS_00040221-exon-sc0002353-1491911889:3845..4199 | TCONS_00040221-exon-sc0002353-1491911889:3845..4199 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002353 | supercontig | sc0002353:3845..4796 - |
Blast
The following BLAST results are available for this feature:
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