TCONS_00040209 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040209
Unique NameTCONS_00040209
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length6140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040209 ID=TCONS_00040209|Name=TCONS_00040209|organism=Clytia hemisphaerica|type=transcript|length=6140bp
ATATGTTTTCTCGTGCAAAAAAAGAAGCACTTCAATGTTAGCATAGCAAA
AAAACGGGAACCATGATGAAACCGCCATAGCACCGGGCAATCTaatctca
atcgaatgcaatTTAATCTCAATGGTaagcaatcgaatatcaatcgaatc
tggaaattgcggtaatattcaattgagatttgattgcattcgacaatcga
atttcaatccaaTTGCATGCGCTTTGGTTCAACTGGTTCGAACGCGgttc
cgtttgattgagattgtctggataTGGGTTGGTCTGGCGCGATCAGTAAT
AGGCAAGATACCTcactgttttttttataatctgatacaCCATCGGCAGA
TTTGGCTGTGAATGAGTTTGTATCCTGGGGGCACTTAGGCCAAATCCATT
ATTCAAACTCTGCAAATCTCAGTTATGGgtcaaaattcagaaaattttaa
gCAATTCATAGAATTTTGTATATAATTTCTTTGCTCTGACAGGGTCAAGT
TTTTGTGAGAAACTTTTAgtcttttgtccattttttgtcaataatcaGTA
TAGTATATTATCTTACaggttcaatttttaaatctcCACCTCCCCCTCAG
TTGTTCAGGTCAGTGGCTCCCTTTGGTCAGTATTTGGCCGGTATGatata
aaaatatgtttttgaaaatataaggTTTGACGAAGTTACGAAAATAAATT
CCTGAATTCTATCTGAATCTAAAATCACCCTTTATCATTTCATGACACAA
AGTTGGAAACATATTCTAAAGAGCTagaaatttaataatttaataCACTC
ATACTTACAAGGTATTTCTATTCTTTAGAATAACAAATATGTGTAAGATT
TACAACAGGGGATCTTCAATGTTATGTTATTAACTGTAAATTTCAAGTCA
TCAGGCCTGTAGAactacaaaatcaattttgttttgcttAAAGTTAGGTT
CAGTTTCTTTAGTTATATTTTAATTATCACGAATTTTGGCAAACTTGTAT
GAAAGAGAGATCCACAGTAAGTAAAAAGACTAGAAATCTTTAAATCCAAT
GTTTAAAATGGTTGTTCCAAGTATCAGTAGGTATAATTTTGACTGAATAA
AGAAAGGTCAACGTACATATTCTAAAagcatttgaaatttttctcttaga
TCTATGCAATGAAAAGTTAGAAATGTCGCACCAGTCAAACAGTAAAAATG
AATATTAATGAATCCCAAGAACAGCTGACTGAAATGATCAACATATAACC
ACCAGGGAGTTGCTCAATAGAATAAATAGATTGATTattactttgttttt
ttcatgatcattttcatttttactagAATGATTAAAAACTCTTATTGTAT
ACTTTTCTTGTTATTCGCATTTTATAATAATTACTTTTAAATACTTCACA
AGGACAGGACTGACATTGACTGACAGTTTAAGTTTGATAACAAAGAGAAC
AACCTGTTTGAATGTCTGTTTATTTGTTATTTAGAACCTTCTACGAGTGT
TGTTGCTGGTGTTAGTGATGTATCACAGCAAGAAAATGTTCCAGACCCAG
GTACACAGGCTACTCAGGCATTGTTGGCTCACACTGCCCTCATCATAGCA
AAATGTTCTGAAGCGGCAACAATTGAAACAACAATACAAGCTATATTGAA
AAAGTCCATANTCATCATAGCAAAATGTTCTGAAGCGGCAACAATTGAAA
CAACAATGCAAGCTATATTGAAAAAGTCAATGGAAACAAAGGAAAGGAAA
GATGAACTACATTTAATGGCAGCAGAAAAAGTGTTACTGTCTCTCTCCTC
ATATTCACGTTGCACTGAATGTATCTTGTATGCCATGCCATTTGTGTTAG
ATGTCAATGGGGAAAATAATTTGTATCTGAgGTGCTTCGAAACTGGGACT
TTGAAAGGATTTTTCGCAAAACATTGTAAAGACCTATTCTCAGAAATCAT
TTCAACGCACAATATCACAAAAGTGCATATCATGAGGATATACAATGATT
GGGATGTTCTTGCTTTCAATCATCATAGATCTGAATCGAGCAAAGGACAT
GGACCagacaaaaatgccaaaatgtTTGAGAAGTTGGTGAATTCAAACAA
AGGATCAATTCGGCATTCTTTTGATCGTGCGTACCAATCTCTGAAAAATA
CGTTTCAAGGCTTTTCTCCAGGCTATGTTGTCTTTTGTGAGCGAATGGCT
CGACAcaccaaaaaacgaaaaaggaaGATTGATGAGTCTGGTGAGCTTGA
CAATATCAATGAAAATCATCAATATTTCAAACTGGATGGTCTTGGTAATA
TAAATCAATGGTCCGCAGCAATCACTGATTATAGGCTGAACCGTCCATTT
AAACCTTACTGTGAGCTCCAAGATTTGGTACAGAAATTTGGGGATTTGGA
TGAGTTAAGCTTAAAAGATCAATTTGAAATCCTGTCTTCTTGTCCCAACC
TACACAAATGGGTAGTACGACCAGATTCTGGAGGTGTCAAACTGTACCAG
TACTTCGTTCCAAATGGTCGATCTCCAAGAAATTTGATACTGGGAGAAAT
GGAAAACGAAAACGTCGAAGACGGCTTAATCAATATCAAAAGCATTGTTA
CAATGGTATTGGCTGAGAAGTACAAACTTCTTCAACCATTgtctttcaaa
aaaacaaacaaaaaaGCATCCTATCAACGAAAAAGGGTCAACAGGGAGAC
TATTCTGGACCAATTAGGAGCAACAGAGGAATCTTTCGAGCTGCCCATGA
CGATCAAATGTTCCCTTTATCAAGAGTTCAAAAGGAATCTTTATAACGAC
GGTATCATTTTGTGGCGTGAACATAATGCCAAATGCCAAGTGGTAGTTAT
GAATAACTATGATTCTGATACTGGTTCTTTTGAGTTTAATGATTTTGTTG
CCGTTACGCGTACTGTCCGTCCTGGTGGAATCATCAATTTCGAATGTACT
TGCGGAACCCATGCAGCCTTAGCTTCGGCAGTGAATTTCAGCGACTGGGA
TGGTATTAAGTGTTGTCATGCTCGCGTCTTTGCTGATATCATTGAGGAGT
TTTCGATTGATTATGTCCAACAAAACGAACATGGGTATGGTGCCCCTCAA
CTGATGCCTAATTCTAACACCGAAAGTGTTGCATCAGTAAAGACCAGCAA
TGGATTAAAATCTGTGATCCAAGACGTAATTCCTTTGCACAGTGTTATGG
ACAGAAATTCTCCGTTAGATCGCCAGTCGGACATCAGTTTATCCACGTAT
ACACAGATAATCGTTCCAAACGTGTATACGTAAAGTGTATGTCTGGTTTG
TGCTCGTTGGCGAACAGCAAGAAGATCAAGCTCAGGACCATGGAAGAAGT
TGACAAGTTGTGCCCACATCTGTTAGTGTTTAAGAGTTACATCGATGAGA
ATTGGGATAAACACCGCCTTCTTCGTCTTCTCCGGACGCAACTAGATACT
GATACTGATACTGATGACGAACAACAGTTAGATGACGTAACTGATCCTGA
TTTTGATGCTGCTCTTGCTGTTCTTCACCTTGACGACACTCCTGGCGATG
TAACAGATAATTCAGAAAATAAAgTAATCGACGGATTCGATCCAGAAACA
CTTACTTGGAAATTTCACTCGAAGTTTGGTCGAATCGTAAATGCTGACCC
TTTTGACGAAAACTTGATTACCAGTACAATCAAACGTACAGAATTTTTCT
TAATGGCTTTAAACAATCAACCTGTAGAATTCCATCCGAGATGCGACTCA
GATCAATGTGCTTGCGAGGTTCCTTGGATGAGAAATTCGGAAGGACAGCT
TGTGTACGTGCCAGACGGAAAAACAACATTGTACACCAGAGATCGTACTA
TCGACTGCGATTTATTCAAATTGGTCTGTTCAACTGGGAAATGCTGCCTA
CGATGGGATGGATTGTTCGAGAATATTTTCCGAATCTCCCAACAAATCTG
TATTGTCGAGGAACTGTGCTGGGAGTACATAGACATGGTGTGCACCTCCA
AGACTACGTTTGCTAGTTTTCGCCAATGCATAGACAACAATTACAAGCGC
CACCGGTCGCCGAAATATTTCATGTCAGCgaaaacattcttaaaattatt
tttttcatggtCAAGTCATCAACCACGAGACTTGAACAGGCAGTGCAATT
GGTGTGGAGAGTCTCCGCAAGTTCTTGCATGTGATGCCACGAAAATCGGT
ATCTTGTCTCAAAACATCGACATCAACCCAATCGAGGCATGTGAGTCCAG
ACAAGTCCTTCCAACAGAAACGAGGCGAAACAATAGGTGTTTTCTAGCCT
TTTCCCCGAAATCAAAAGACGAATCGGACGAGCAGTACAAAAATAGATTA
AGAACAATACGGGACTCGAGAAACTATTTAAAAACCTGGACATCGAATTC
AACCGAGGACAAATTAACCCCCCTCGAGCACCTTGATTGCCGTAAGCAGC
TGTTGAGTGTTTTACCGCAAAAAGTAAAACCATTCTTTTCGAGGTACATC
AACCAACAGATGAGTATTGTTCAACTCAAGGCTGCGAAACGAGTAATGCA
TTTGTTGAGTTTCGATGCACCTGTGAGAGCCTTTTTACCGAAGCAACTGG
TTCCCATTATGGAAACTATGGTAATGGAGAAGCATGCTCGAACTGGTTTG
TTGCGGGAGTGTCAAAAGTTCAACATTGCTCTAAGCAATCTTCTCGCTGC
CTTCAATGATAGATTCCTCGACTCTGACGTTTTGTCCCTTATCGAATACC
TTTTGGAAAGAGTTCGTTCGGTTCCAGAACCCGATATTCCACCCTGTGAA
GTCATACCGAACGATCCCTCAAAATCAGGACGCTTTTATTACTTCAGAAA
GGATGGAGCACAGATTAGAAAAAACCGTAATTTCGAAATTGGAAAAGGCG
ACGACGAGCCGACAACGTCAAGCTGCAGCAAAAGATATCCCATCGTTGCT
CCACGAGGCACGTCCTTTCTTTTTCTGTGGTTTTGCCCAGCACATGGTTT
TTGTTACGGAGGGCATATTGTGAACGGCAGTGAAGGCAGAAAGGATGCGG
CCTGCTCCCTATTTCAGTTTTTGGAGACAGCTCCTGAAGGTTTATTCTAT
GATTTTGCTTGTGGTTTTGAGGAGTACTCACTGAATCGTGAATCGGGCTA
CTTCTCAAACACAAGATTTTTTCACGATCTATTCCACAGATATGGTCATA
ATTGTTCGCCTATGTACAGCACCAAATCTTTGATTGGCATGACGTACAAC
ACAAGTATATGCGAACAATTTAATAGTTTCCTGCAATGCGTGAAAGCCTC
GTGCAAGCACATGTCGCAGGAACACTTCGTATTTTACGTTAAATTTTTCA
TAGACATTTGGAACACCaaaaaagaaacaagttttaagaacaaattacgT
GTTGCCCTGGCTGGTTCAAAGTAGTTTATTTTGATAGTTTGTAATTGTTT
AAACGAATGCTTGAGCTATTCCCTCTATTCTCTCCTTCgcttaaatcttt
gttttcttctgtGTTGAGGCTTTACAAAAAGGTGCTTATTCCGATATTCA
GAAATTCAGTTTTGTAAAGTACTTTCATGTAAAACTTTGGCTGAATCGTG
AAGGGAGGGAATGCAGGCTATTTATCAACCGTTGTATTTAATATTTACTT
ATATACTTACTTATCCGAAGTTCTAttttgaaatcgttattttaaCGCTT
AGAGCGTTTTCTGTACAAGGGATATTGCCAACAGTTTTATCCCTATTTCA
ACTTAAATTTCTTCTTTGTGGAGTATTGTTTATTTTCGCGTCTTGCGTTT
TTTTGTCATTTCGTTGCATCCGAGATGTTTGGTTTCGTTCTTATAGTTTA
TCCTATGCGTCATTTTCTTCTCTGTACATTTATTATTTCGTCATAGACAT
CAATATATCAAATTAGTTTATTTCGCAGCTCCTAAATTTTCATGATGATA
TTTTTATCTTATCTATAATTgtcaaaattaatattttgtCTATGTTGTGT
CGGGAACATGAAGATCCTTGTAAAGATTACCATTTTCAGGCTAACCGAGT
CATTAGGTAAACTGTCGAAGTAATGACAGTTACTCTATATTTTACTCTTT
TAGCCTGAAcatgtaaataaagaaaaagaattagTTGTCT
Run BLAST on NCBI

transcript from alignment at sc0002351:7634..16944-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040209 ID=TCONS_00040209|Name=TCONS_00040209|organism=Clytia hemisphaerica|type=transcript|length=9311bp|location=Sequence derived from alignment at sc0002351:7634..16944- (Clytia hemisphaerica)
ATATGTTTTCTCGTGCAAAAAAAGAAGCACTTCAATGTTAGCATAGCAAA
AAAACGGGAACCATGATGAAACCGCCATAGCACCGGGCAATCTAATCTCA
ATCGAATGCAATTTAATCTCAATGGTAAGCAATCGAATATCAATCGAATC
TGGAAATTGCGGTAATATTCAATTGAGATTTGATTGCATTCGACAATCGA
ATTTCAATCCAATTGCATGCGCTTTGGTTCAACTGGTTCGAACGCGGTTC
CGTTTGATTGAGATTGTCTGGATATGGGTTGGTCTGGCGCGATCAGTAAT
AGGCAAGATACCTCACTGTTTTTTTTATAATCTGATACACCATCGGCAGA
TTTGGCTGTGAATGAGTTTGTATCCTGGGGGCACTTAGGCCAAATCCATT
ATTCAAACTCTGCAAATCTCAGTTATGGGTCAAAATTCAGAAAATTTTAA
GCAATTCATAGAATTTTGTATATAATTTCTTTGCTCTGACAGGGTCAAGT
TTTTGTGAGAAACTTTTAGTCTTTTGTCCATTTTTTGTCAATAATCAGTA
TAGTATATTATCTTACAGGTTCAATTTTTAAATCTCCACCTCCCCCTCAG
TTGTTCAGGTCAGTGGCTCCCTTTGGTCAGTATTTGGCCGGTATGATATA
AAAATATGTTTTTGAAAATATAAGGTTTGACGAAGTTACGAAAATAAATT
CCTGAATTCTATCTGAATCTAAAATCACCCTTTATCATTTCATGACACAA
AGTTGGAAACATATTCTAAAGAGCTAGAAATTTAATAATTTAATACACTC
ATACTTACAAGGTATTTCTATTCTTTAGAATAACAAATATGTGTAAGATT
TACAACAGGGGATCTTCAATGTTATGTTATTAACTGTAAATTTCAAGTCA
TCAGGCCTGTAGAACTACAAAATCAATTTTGTTTTGCTTAAAGTTAGGTT
CAGTTTCTTTAGTTATATTTTAATTATCACGAATTTTGGCAAACTTGTAT
GAAAGAGAGATCCACAGTAAGTAAAAAGACTAGAAATCTTTAAATCCAAT
GTTTAAAATGGTTGTTCCAAGTATCAGTAGGTATAATTTTGACTGAATAA
AGAAAGGTCAACGTACATATTCTAAAAGCATTTGAAATTTTTCTCTTAGA
TCTATGCAATGAAAAGTTAGAAATGTCGCACCAGTCAAACAGTAAAAATG
AATATTAATGAATCCCAAGGTATGATGATTGATTATTACAATAAGTCAAT
AATTAATATGCATTTAAAAAGGCTTCAATCTGTTCTTTTATTAAACTAAT
ATATTATATATAGTTTTTTGTATTACTTTTCTTTCCAAAGTCTAATACAC
TTTACATACTTTTGACACACTGACAAACAAGATTTTACAGACATGACATA
TTTGATGGAGTGTCCCAGAAACAATTACCCCCTCTGACCCTCTTTGACTC
TTGAGAGAAAATATAATTTTGATAAATTATTGTTGTGAGTTACAAATATG
TTAATTTGATCATGTTTGTTGATAATACTTACATTTCGTTGACAAATGAC
AAATGGTGAAAAATGCGAGAGAAATCACATGTCTCTCTCTCTCTCTCTCA
GGCAGAAGGGATGATTGTTTATGGGACACTCTAGAATTATTTTTTGGTTA
ACATTATCTTTATTTCTTTTTATTGACAGAACAGCTGACTGAAATGATCA
ACATATAACCACCAGGGAGTTGCTCAATAGAATAGATTGATTATTACTTT
GTTTTTTTCATGATCATTTTCATTTTTACTAGAATGATTAAAAACTCTTA
TTGTATACTTTTCTTGTTATTCGCATTTTATAATAATTACTTTTAAATAC
TTCACAAGGACAGGACTGACATTGACTGACAGTTTAAGTTTGATAACAAA
GAGAACAACCTGTTTGAATGTCTGTTTATTTGTTATTTAGAACCTTCTAC
GAGTGTTGTTGCTGGTGTTAGTGATGTATCACAGCAAGAAAATGTTCCAG
ACCCANGCATGTCTCTCTCTCTCTCAGGCAGAAGGGATGATTGTTTATGG
GACACTCTAGAATTATTTTTTGGTTAACATTATCTTTATTTCTTTTTATT
GACAGAACAGCTGACTGAAATGATCAACATATAACCACCAGGGAGTTGCT
CAATAGAATAAATAGATTGATTATTACTTTGTTTTTTTCATGATCATTTT
CATTTTTACTAGAATGATTAAAAACTCTTATTGTATACTTTTCTTGTTAT
TCGCATTTTATAATAATTACTTTTAAATACTTCACAAGGACAGGACTGAC
ATTGACTGACAGTTTAAGTTTGATAACAAAGAGAACAACCTGTTTGAATG
TCTGTTTATTTGTTATTTAGAACCTTCTACGAGTGTTGTTGCTGGTGTTA
GTGATGTATCACAGCAAGAAAATGTTCCAGACCCAGGTAAATATATGTAA
AATTGGTGACTTTCAATCAATCTATACAAACAGAAATTCCTTTGAATTAA
CATTATTTTTCAATTGTTAACCTTCTTTTTTTATATATTAGGTACACAGG
CTACTCAGGCATTGTTGGCTCACACTGCCCTCATCATAGCAAAATGTTCT
GAAGCGGCAACAATTGAAACAACAATACAAGCTATATTGAAAAAGTCCAT
ANTCATCATAGCAAAATGTTCTGAAGCGGCAACAATTGAAACAACAATGC
AAGCTATATTGAAAAAGTCAATGGAAACAAAGGAAAGGAAAGATGAACTA
CATTTAATGGCAGCAGAAAAAGTGTTACTGTCTCTCTCCTCATATTCACG
TTGCACTGAATGTATCTTGTATGCCATGCCATTTGTGTTAGATGTCAATG
GGGAAAATAATTTGTATCTGAGGTAAATTTCAAATATTTATAAAAACTTT
TTTAACTGATTCTGTTTGGAGGTGAGTATCTAGGAGCAAATTTCAGAATA
GGTTCCATTGAATAGAAACTTTTTCATCAACATATACTGTGTAGTTTTTG
TTTTTCTTTACTTAATCAGGTGCTTCGAAACTGGGACTTTGAAAGGATTT
TTCGCAAAACATTGTAAAGACCTATTCTCAGAAATCATTTCAACGCACAA
TATCACAAAAGTGCATATCATGAGGATATACAATGATTGGGATGTTCTTG
CTTTCAATCATCATAGATCTGAATCGAGCAAAGGTAAGGCAGAAGACTTA
GTTTAGCACAAACATACTAAAACCTGGTTAGTTCATATATTTAAAAAGAT
TGATTCAACAGTCAGGGAGGCTAGGATTGACTTGAACGAAATATTTATTT
CGGAACCCCTGTATATTTTACTTTAGGACATGGACCAGACAAAAATGCCA
AAATGTTTGAGAAGTTGGTGAATTCAAACAAAGGATCAATTCGGCATTCT
TTTGATCGTGCGTACCAATCTCTGAAAAATACGTTTCAAGGCTTTTCTCC
AGGCTATGTTGTCTTTTGTGAGCGAATGGCTCGACACACCAAAAAACGAA
AAAGGAAGATTGATGAGTCTGGTGAGCTTGACAATATCAATGAAAATCAT
CAGTAAGCCCATTAAATTGAATATTTCATCGATTCAAAATTTGACGGTAA
ATTGATTAATACTGTGTCATAATATCGCTCGTTTTTCGATCTTTTTAAAG
CTAAAAAGAAAATCTAAAAAGAAAGCTTTGTTCTATTTCCAGTTTGTTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCAGCTGTTTTATTGTATAAAAACAGGTATAAAAGTCTACG
ATTTAACTTTTGTCTTTTACTTCAGATATTTCAAACTGGATGGTCTTGGT
AATATAAATCAATGGTCCGCAGCAATCACTGATTATAGGCTGAACCGTCC
ATTTAAACCTTACTGTGAGCTCCAAGATTTGGTACAGAAATTTGGGGATT
TGGATGAGTTAAGCTTAAAAGATCAATTTGAAATCCTGTCTTCTTGTCCC
AACCTACACAAATGGGTAGTACGACCAGATTCTGGAGGTGTCAAACTGTA
CCAGTACTTCGTTCCAAATGGTCGATCTCCAAGAAATTTGATACTGGGAG
AAATGGAAAACGAAAACGTCGAAGACGGCTTAATCAATATCAAAAGCATT
GTTACAATGGTATTGGCTGAGAAGTACAAACTTCTTCAACCATTGTCTTT
CAAAAAAACAAACAAAAAAGTATGTTTTCTTTCGCGACAAGTTTCTTTTT
AAAAAATAATCCTCACCTCGAATTGTATTAAATATATTAAAATAAATTTT
TATAAAGGACTCAAAGTTCGCAATATGACGGCGACATCACCATTCATCCC
CGCGGTCGAGGCAATAGATTCAACTTTAGCCTGCCAGCTATCACGGTCTC
TCATGGCAGAATTACTAACACGTACTTCCGTGGTTTACTCCCATGGTGGT
AATGTTTTGGAAAAAGGCTCGTAAATGTCCGTTATTTATAGAAAAGGGGT
ATACTATACAAGTATATAATGTAATATTAATACTACGTTTACAATTTACA
GGCATCCTATCAACGAAAAAGGGTCAACAGGGAGACTATTCTGGACCAAT
TAGGAGCAACAGAGGAATCTTTCGAGCTGCCCATGACGATCAAATGTTCC
CTTTATCAAGAGTTCAAAAGGAATCTTTATAACGACGGTATCATTTTGTG
GCGTGAACATAATGCCAAATGCCAAGTGGTAGTTATGAATAACTATGATT
CTGATACTGGTTCTTTTGAGGTAAAAGTTTTACCCACTGGTCTGGTTCGT
GTCATTCCTAAATTTTTGTTTATTATTCTAAAGAGAAAAATCAGGTAAGA
ATATCTTCTTAAACATTGATTTATACAATTCCATTTTCAGTTTAATGATT
TTGTTGCCGTTACGCGTACTGTCCGTCCTGGTGGAATCATCAATTTCGAA
TGTACTTGCGGAACCCATGCAGCCTTAGCTTCGGCAGTGAATTTCAGCGA
CTGGGATGGTATTAAGTGTTGTCATGCTCGCGTCTTTGCTGATATCATTG
AGGAGGTAATGAACTATATGATGAAATTTCAATTTTGATTGGATTATTTT
AGTTTGTTTTCTCGCGCAATCTGATCATGATCACTTCTAGTGGAAGGTAA
TAATATCGTATTGAATAACATAATATTTGACTAAATAGTCAGTGTCATTT
CTTCATAGTTTTCGATTGATTATGTCCAACAAAACGAACATGGGTATGGT
GCCCCTCAACTGATGCCTAATTCTAACACCGAAAGTGTTGCATCAGTAAA
GACCAGCAATGGATTAAAATCTGTGATCCAAGACGTAATTCCTTTGCACA
GTGTTATGGACAGAAATTCTCCGTTAGATCGCCAGTCGGACATCAGTTTA
TCCACGTATACACAGATAATCGTTCCAAACGTGTATACGTAAAGTGTATG
TCTGGTTTGTGCTCGTTGGCGAACAGCAAGAAGATCAAGCTCAGGACCAT
GGAAGAAGTTGACAAGTTGTGCCCACATCTGTTAGTGTTTAAGAGTTACA
TCGATGAGAATTGGGATAAACACCGCCTTCTTCGTCTTCTCCGGACGCAA
CTAGATACTGATACTGATACTGATGACGAACAACAGTTAGATGACGTAAC
TGATCCTGATTTTGATGCTGCTCTTGCTGTTCTTCACCTTGACGACACTC
CTGGCGATGTAACAGATAATTCAGAAAATAAAGTAAGATTAAGTCTCATA
TTCATTATTCAAAATTTTTCGTTTTCTACTGTATGTTTTAAATCTATATT
CAGTTTTTTACTCTATCATAAATGCAAAAAAAGTTTTTATTTAAGTTAAC
TGTTTGAATTTAAAATCTTTTTAAAGGTAATCGACGGATTCGATCCAGAA
ACACTTACTTGGAAATTTCACTCGAAGTTTGGTCGAATCGTAAATGCTGA
CCCTTTTGACGAAAACTTGATTACCAGTACAATCAAACGTACAGAATTTT
TCTTAATGGCTTTAAACAATCAACCTGTAGAATTCCATCCGAGATGCGAC
TCAGATCAATGTGCTTGCGAGGTAATCATACTTCAAGAAGAAAAGTAATC
ATAATAATATGATTCTGCTTCAAAACTAGACTGTTTTTATAACTGAGAGT
AAATGCTGACCCTTTTGACCACTTTATTTTAACTAACTCGTTAATCACAC
GACAAGACACGCTGACCGAGATGATATAGAGTTATATCCCATGCTTATAA
AGTGTACTTATGCTCGATTCTACCATCCCCCTTTCACTCTAGCAAATGGG
TTTTCCTATTTCACTAAAGATTCATTTATATTTTGACAGGTTCCTTGGAT
GAGAAATTCGGAAGGACAGCTTGTGTACGTGCCAGACGGAAAAACAACAT
TGTACACCAGAGATCGTACTATCGACTGCGATTTATTCAAATTGGTCTGT
TCAACTGGGAAATGCTGCCTACGATGGGATGGATTGTTCGAGAATATTTT
CCGAATCTCCCAACAAATCTGTATTGTCGAGGAACTGTGCTGGGAGTACA
TAGACATGGTGTGCACCTCCAAGACTACGTTTGCTAGTTTTCGCCAATGC
ATAGACAACAATTACAAGCGCCACCGGTCGCCGAAATATTTCATGTCAGC
GAAAACATTCTTAAAATTATTTTTTTCATGGTCAAGTCATCAACCACGAG
ACTTGAACAGGCAGTGCAATTGGTGTGGAGAGTCTCCGCAAGTTCTTGCA
TGTGATGCCACGAAAATCGGTATCTTGTCTCAAAACATCGACATCAACCC
AATCGAGGCATGTGAGTCCAGACAAGTCCTTCCAACAGAAACGAGGCGAA
ACAATAGGTGTTTTCTAGCCTTTTCCCCGAAATCAAAAGACGAATCGGAC
GAGCAGTACAAAAATAGATTAAGAACAATACGGGACTCGAGAAACTATTT
AAAAACCTGGACATCGAATTCAACCGAGGACAAATTAACCCCCCTCGAGC
ACCTTGATTGCCGTAAGCAGCTGTTGAGTGTTTTACCGCAAAAAGTAAAA
CCATTCTTTTCGAGGTACATCAACCAACAGATGAGTATTGTTCAACTCAA
GGCTGCGAAACGAGTAATGCATTTGTTGAGTTTCGATGCACCTGTGAGAG
CCTTTTTACCGAAGCAACTGGTTCCCATTATGGAAACTATGGTAATGGAG
AAGCATGCTCGAACTGGTTTGTTGCGGGAGTGTCAAAAGTTCAACATTGC
TCTAAGCAATCTTCTCGCTGCCTTCAATGATAGATTCCTCGACTCTGACG
TTTTGTCCCTTATCGAATACCTTTTGGAAAGAGTTCGTTCGGTTCCAGAA
CCCGATATTCCACCCTGTGAAGTCATACCGAACGATCCCTCAAAATCAGG
ACGCTTTTATTACTTCAGAAAGGATGGAGCACAGATTAGAAAAAACCGTA
ATTTCGAAATTGGAAAAGGCGACGACGAGCCGACAACGTCAAGCTGCAGC
AAAAGATATCCCATCGTTGCTCCACGAGGCACGTCCTTTCTTTTTCTGTG
GTTTTGCCCAGCACATGGTTTTTGTTACGGAGGGCATATTGTGAACGGCA
GTGAAGGCAGAAAGGATGCGGCCTGCTCCCTATTTCAGTTTTTGGAGACA
GCTCCTGAAGGTTTATTCTATGATTTTGCTTGTGGTTTTGAGGAGTACTC
ACTGAATCGTGAATCGGGCTACTTCTCAAACACAAGATTTTTTCACGATC
TATTCCACAGATATGGTCATAATTGTTCGCCTATGTACAGCACCAAATCT
TTGATTGGCATGACGTACAACACAAGTATATGCGAACAATTTAATAGTTT
CCTGCAATGCGTGAAAGCCTCGTGCAAGCACATGTCGCAGGAACACTTCG
TATTTTACGTTAAATTTTTCATAGACATTTGGAACACCAAAAAAGAAACA
AGTTTTAAGAACAAATTACGTGTTGCCCTGGCTGGTTCAAAGTAGTTTAT
TTTGATAGTTTGTAATTGTTTAAACGAATGCTTGAGCTATTCCCTCTATT
CTCTCCTTCGCTTAAATCTTTGTTTTCTTCTGTGTTGAGGCTTTACAAAA
AGGTGCTTATTCCGATATTCAGAAATTCAGTTTTGTAAAGTACTTTCATG
TAAAACTTTGGCTGAATCGTGAAGGGAGGGAATGCAGGCTATTTATCAAC
CGTTGTATTTAATATTTACTTATATACTTACTTATCCGAAGTTCTATTTT
GAAATCGTTATTTTAACGCTTAGAGCGTTTTCTGTACAAGGGATATTGCC
AACAGTTTTATCCCTATTTCAACTTAAATTTCTTCTTTGTGGAGTATTGT
TTATTTTCGCGTCTTGCGTTTTTTTGTCATTTCGTTGCATCCGAGATGTT
TGGTTTCGTTCTTATAGTTTATCCTATGCGTCATTTTCTTCTCTGTACAT
TTATTATTTCGTCATAGACATCAATATATCAAATTAGTTTATTTCGCAGC
TCCTAAATTTTCATGATGATATTTTTATCTTATCTATAATTGTCAAAATT
AATATTTTGTCTATGTTGTGTCGGGAACATGAAGATCCTTGTAAAGATTA
CCATTTTCAGGCTAACCGAGTCATTAGGTAAACTGTCGAAGTAATGACAG
TTACTCTATATTTTACTCTTTTAGCCTGAACATGTAAATAAAGAAAAAGA
ATTAGTTGTCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024397XLOC_024397Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040209-exon-sc0002351-1575043694:15726..16944TCONS_00040209-exon-sc0002351-1575043694:15726..16944Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:14509..14839TCONS_00040209-exon-sc0002351-1575043694:14509..14839Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:14073..14403TCONS_00040209-exon-sc0002351-1575043694:14073..14403Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:13762..13925TCONS_00040209-exon-sc0002351-1575043694:13762..13925Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:13393..13618TCONS_00040209-exon-sc0002351-1575043694:13393..13618Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:12126..12519TCONS_00040209-exon-sc0002351-1575043694:12126..12519Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:11575..11793TCONS_00040209-exon-sc0002351-1575043694:11575..11793Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:11290..11454TCONS_00040209-exon-sc0002351-1575043694:11290..11454Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:10613..11136TCONS_00040209-exon-sc0002351-1575043694:10613..11136Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:10274..10468TCONS_00040209-exon-sc0002351-1575043694:10274..10468Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1575043694:7634..10005TCONS_00040209-exon-sc0002351-1575043694:7634..10005Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:15726..16944TCONS_00040209-exon-sc0002351-1510915933:15726..16944Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:14509..14839TCONS_00040209-exon-sc0002351-1510915933:14509..14839Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:14073..14403TCONS_00040209-exon-sc0002351-1510915933:14073..14403Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:13762..13925TCONS_00040209-exon-sc0002351-1510915933:13762..13925Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:13393..13618TCONS_00040209-exon-sc0002351-1510915933:13393..13618Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:12126..12519TCONS_00040209-exon-sc0002351-1510915933:12126..12519Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:11575..11793TCONS_00040209-exon-sc0002351-1510915933:11575..11793Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:11290..11454TCONS_00040209-exon-sc0002351-1510915933:11290..11454Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:10613..11136TCONS_00040209-exon-sc0002351-1510915933:10613..11136Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:10274..10468TCONS_00040209-exon-sc0002351-1510915933:10274..10468Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1510915933:7634..10005TCONS_00040209-exon-sc0002351-1510915933:7634..10005Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:15726..16944TCONS_00040209-exon-sc0002351-1491911889:15726..16944Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:14509..14839TCONS_00040209-exon-sc0002351-1491911889:14509..14839Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:14073..14403TCONS_00040209-exon-sc0002351-1491911889:14073..14403Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:13762..13925TCONS_00040209-exon-sc0002351-1491911889:13762..13925Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:13393..13618TCONS_00040209-exon-sc0002351-1491911889:13393..13618Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:12126..12519TCONS_00040209-exon-sc0002351-1491911889:12126..12519Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:11575..11793TCONS_00040209-exon-sc0002351-1491911889:11575..11793Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:11290..11454TCONS_00040209-exon-sc0002351-1491911889:11290..11454Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:10613..11136TCONS_00040209-exon-sc0002351-1491911889:10613..11136Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:10274..10468TCONS_00040209-exon-sc0002351-1491911889:10274..10468Clytia hemisphaericaexon
TCONS_00040209-exon-sc0002351-1491911889:7634..10005TCONS_00040209-exon-sc0002351-1491911889:7634..10005Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002351supercontigsc0002351:7634..16944 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.216113	0.181514	0.0358356	0.296205	1.87286	2.33262	1.2784	2.49621	0.222725	0.384989	0.782204	1.19409	1.71833	1.10507	0.0870152	0	0	0.0333179	0	0	0.147765	0.194743	0.107709	0.163205	0.630388	1.85152	0.0837952	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040209 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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