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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040201 ID=TCONS_00040201|Name=TCONS_00040201|organism=Clytia hemisphaerica|type=transcript|length=384bp
AATCACGTTGAACAAAAACCAACTGACCAGATTACCTGCAAACATATCAC
TTTATATACCAAGCATCACCATTCTCGATGTAGAAGacaataatattaat
aaaattaaacaaaagGACTTTGAAGGGTACGATTCTATCATATCTATATT
CCTTCAAAGAAATGGTATTGAAAATTTGGAACCTCGTGTTTTTCAGAATC
TTTCAAAACTAGAATATCTGTACGCAGGAGGTAATAAATTGACGACTTTA
CGAAAGGGTACGTTTACCGGATTAGCTAAGTTACGACGATTATTCTTAGC
TGGTAATGATATAACGACTGTTGAAACTGGAGTCTTTGGTGATCTTCCGT
CTTTGAGTTggatatacttgcagttcaatAAGAT Run BLAST on NCBI transcript from alignment at sc0002350:3263..6572- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040201 ID=TCONS_00040201|Name=TCONS_00040201|organism=Clytia hemisphaerica|type=transcript|length=3310bp|location=Sequence derived from alignment at sc0002350:3263..6572- (Clytia hemisphaerica)
AATCACGTTGAACAAAAACCAACTGACCAGATTACCTGCAAACATATCAC
TTTATATATCAAGCATCACCATCCTCGATCTAGATGACAATAATTATAAT
AATAACTTCGAACAAAAGGACTTCGAAGGGTATGATTCTATCATAGCTAT
ATTCCTTCCGAGAAATGGTATTGAAAATTTGGAACCTCATGTTTTTCAGA
ATCTTTCTTTACATTTTTATACAAAGGAAGAAAGAAAATATCTGAATTGT
ACCCTTCGGAAGCTACAGCACCATGGAGAGACATTTCCGGTGACGTTCTT
GGACCTTACGTGGAAACGCACGCTGGTAACAGATACATTGTCTCATTCGT
TGATCATTTCAGTGGATGGCCTGAGTGTTTTGCAGTGCCAACTAATGAAN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGTGCTTGGGTTCGAACACAG
TCCATTGCGTCCATTGAGTCTAGTCCATTGAGTCTCACTAACATTCTGTA
GTGTTAATGTAAATTTTGATGATTTAATTTATACAATACCACAAATATCA
CTAGCCAATCAAATGCGAGTATTCAGTCATGTGATTTTAAGTGGACATGT
GGAAAGTTTGGATGTTTATTTCCTTATTTTTTATTTTCGAAAGTTCTTTG
GTAGATGAAGAAGTTGTGTTGAGTTTTTGCCTGGTTTTTACAGGGGTTTT
TATTTTGCTTTTAGAAAACAATACTTGAAATGACAACAAGTTTAGTCAAA
GTTGACGCAACCTAGTCTTAAGATCCATTCTCTCTAACCAAAACTTACAC
CACATAAAAGANCGCAACCTAGTCTTAAGATCCATTCTCTCTAACCAAAA
CTTACACCACATAAAAGAAAAATCCCATCAGATGCTACTCAGTGAGAGCA
TGGGTATTTAAGACTTAGTTTGAATTTGCTTATATTTGGTTTGAATTTCG
TGCCAAAATAAGCTGTGAATAATTAATAATGTGTATAAAAACGACTTTAT
TTTCATTTTCAGGAAAAACCTAAAGAAAAATAACTGACAATCAAAATTAT
GAATATGCTATTCCACCATCTTCTCATTTTATTGGCTTGCATTGTTTCCA
GTTTTGCATCAAGTTCAACAACTTGTCCAACAAAATGTAAGTGTTATTGG
GAACGTGGTCATAGTGCCGTCGATGTGTTTTGTACAAACCAAAATATCAC
CAACAAAGATATTCTAGATATTGCATCCCAATTGGATACAAAAAAAACTG
TGCATTTAAGTCTCAGCAGTAATCTGATCACCGAATTTCAAGCTGAACTT
TTTGTTAATTTCACTAAACTTGATCGAATCACATTGAACAAAAACCAACT
GACCAGATTGCCTGCAAACATATCACTTTATATACCAAGCATCACCATTC
TCGATGTAGAAGACAATAATATTAATAAAATTAAACAAAAGGACTTTGAA
GGGTACGATTCTATCATATCTATATTCCTTCAAAGAAATGGTATTGAAAA
TTTGGAACCTCGTGTTTTTCAGAATCTTTCAAAACTAGAATATCTGTACG
CAGGAGGTAATAAATTGACGACTTTACGAAAGGGTACGTTTACCGGATTA
GCTAAGTTACGACGATTATTCTTAGCTGGTAATGATATAACGACTGTTGA
AACTGGAGTCTTTGGTGATCTTCCGTCTTTGAGTTGGATATACTTGCAGT
TCAATAAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040201-exon-sc0002350-1575043694:6530..6572 | TCONS_00040201-exon-sc0002350-1575043694:6530..6572 | Clytia hemisphaerica | exon |
| TCONS_00040201-exon-sc0002350-1575043694:3263..3603 | TCONS_00040201-exon-sc0002350-1575043694:3263..3603 | Clytia hemisphaerica | exon |
| TCONS_00040201-exon-sc0002350-1510915933:6530..6572 | TCONS_00040201-exon-sc0002350-1510915933:6530..6572 | Clytia hemisphaerica | exon |
| TCONS_00040201-exon-sc0002350-1510915933:3263..3603 | TCONS_00040201-exon-sc0002350-1510915933:3263..3603 | Clytia hemisphaerica | exon |
| TCONS_00040201-exon-sc0002350-1491911889:6530..6572 | TCONS_00040201-exon-sc0002350-1491911889:6530..6572 | Clytia hemisphaerica | exon |
| TCONS_00040201-exon-sc0002350-1491911889:3263..3603 | TCONS_00040201-exon-sc0002350-1491911889:3263..3603 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002350 | supercontig | sc0002350:3263..6572 - |
Blast
The following BLAST results are available for this feature:
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