TCONS_00040155 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040155
Unique NameTCONS_00040155
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1084

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040155 ID=TCONS_00040155|Name=TCONS_00040155|organism=Clytia hemisphaerica|type=transcript|length=1084bp
gTGGCCTTGACAGTTTGTATTATATCTTGGTTTTATCATGTAGTTTAATG
CTTCGGTTGTTTTCAGTTAGTTTTTAAAATGgatgaattttattttgcag
GCTTGAAAGAAACCTCTACAAAGACGTTCAAATCACTTTGAATGTCAAAA
ACTTGAACATTGCTAATATCACTGCTATTGATGTCGGCAAAGAAATCGAC
GAAAAAACAGAAATCGTATATGAAGGATTACAACAAAACGAATACTTGAC
CAGACCATTGAATGATATACTGCTAGTGCAGATTCGTAAGGAGATGGCAT
CGGGGTTCGTTCATTttattaaaatgaaaacattgcaAACTGATGGCACC
AATGAAGAGTTTGTTGTTAATGTCAAAGGAAGAGATATGTTGCACTGCCA
AAGAACTTTCACCGTTGATAAAACACTGATCTACACACACAACTCTGGAG
TGGATGATGATGTTCATCATTACAAACCAACAAAACCCATAACAGAGGAA
CAAGAATGTAGACCGATACGAACTGGTCCAAGCATTACGAAGACTGTTGC
CGACTTTAGAGAAAGATCGTTACAGTATTTTACAGAAAACACAGTCGCAA
GAGAGCGACATTTTCCGCCGTCATATtacttgaaaaatgaaaacattaaa
gATTGGTTAGAAAAATTGGACAAGATGGAAATGTTCAAAAATGTGAAGTT
TTTGACACAATATCATCCGAGAAACCATTTGTACCTCATGGGGCTGGATG
ATAAGGATTGTGATGAAATCATAACAGCAAAACATAAATTGTATGATGAC
ATCATTCTGGTTGTTGATTTTGATCGTCATCTGGTGATGATATGTTCTAT
CATCACTTCACATGATCGAGAAACTCTGTATCAAGAAATACGGAAACTTA
ATGACGTTACAAAAACAATTATCCATGTAGCCAGTAACGACATAAAAAAT
GACTACGTCACCATTATGTCGGTCCCAGTTCTCCTTACCGTTGAAGCGCA
CACTTTAAACCTGTATTCAATATTCAATGACAATTTTCTTGGTTGCAGTG
GAATGTTGGTCACTAAAAACGATTTAGATTGCAC
Run BLAST on NCBI

protein sequence of TCONS_00040155-protein

>TCONS_00040155-protein ID=TCONS_00040155-protein|Name=TCONS_00040155-protein|organism=Clytia hemisphaerica|type=polypeptide|length=263bp
MASGFVHFIKMKTLQTDGTNEEFVVNVKGRDMLHCQRTFTVDKTLIYTHN
SGVDDDVHHYKPTKPITEEQECRPIRTGPSITKTVADFRERSLQYFTENT
VARERHFPPSYYLKNENIKDWLEKLDKMEMFKNVKFLTQYHPRNHLYLMG
LDDKDCDEIITAKHKLYDDIILVVDFDRHLVMICSIITSHDRETLYQEIR
KLNDVTKTIIHVASNDIKNDYVTIMSVPVLLTVEAHTLNLYSIFNDNFLG
CSGMLVTKNDLDC
Run BLAST on NCBI

transcript from alignment at sc0002330:7021..27241-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040155 ID=TCONS_00040155|Name=TCONS_00040155|organism=Clytia hemisphaerica|type=transcript|length=20221bp|location=Sequence derived from alignment at sc0002330:7021..27241- (Clytia hemisphaerica)
GTGGCCTTGACAGTTTGTATTATATCTTGGTTTTATCATGTAGTTTAATG
CTTCGGTTGTTTTCAGTTAGTTTTTAAAATGGATGAATTTTATTTTGCAG
GCTTGAAAGAAACCTCTACAAAGACGTTCAAATCACTTTGAATGTCAAAA
ACTTGAACATTGCTAATATCACTGCTATTGATGTCGGCAAAGAAATCGAC
GAAAAAACAGAAATCGTATATGAAGGATTACAACAAAACGAATACTTGAC
CAGACCATTGAATGATATACTGCTAGTGCAGATTCGTAAGGAGATGGCAT
CGGGGTTCGTTCATTTTATTAAAATGAAAACATTGCAAACTGATGGCACC
AATGAAGAGTTTGTTGTTAATGTCAAAGGAAGAGGTAGGCTTTATACTTT
ATCAAAAAGTATCGTTATACTTATTCAGAACACACATTTCTGTCTATGCT
CCGAAGTTGTATAACCTCAGGAAAGCTAATACGAGTTTTAAAAATAATTG
GGGCGACGCCCAACGTCTCCGATTTCCTCGTGTAACTTATTGCATCATAA
AAAATGATGTAAGCATGGTGCAGAAAACTGGGACCTTTGCCATTGTCATT
TATACGTCAAAAGAAGCGTATTAGGATATCTTTATTTGATATCTTTTCTT
AGAAATCAGGGGAAAAGCGCTTTGTGACGTCATAATTGATTACGTAAGCA
GTGGCGTTGTGGCAGGGGGGGGGCGGGGGGCCCAGGCCCCCCCAGCGGAG
CTTTTTTGAAGGGGCGCCGAAGAGCAAGGAGCGCAAAAAAAGATTTTTTT
AAACGCCTTAATCTTAAAAATCATACTTTATGCGCCTTTAACTGTGCCCC
AGAATCAATTTTACTGAGATAATTTTCAAAAATGCTTGTACTTTTTTCCC
TCGCTTCGCTTGCAATAAAGTTAATTGGTAACTTCTTTCCAATCTAGCTA
ATTTACAAGGTTTTTTTGCGTAAAATATAGCATTATTAAATGAAAATCTA
ACTGCGCCCCAAGACCAATTTGCTGACAACAATATTGAAATTATTACGCA
CGAGCGAGCGCAGCGAGCGAGTGCGATTCTTTTGGCAAAAGCGCGGGAAA
AAGCTGATATGCGGGGTGATAAAATCGATTTTTCAGCTTTTTTAGCCTCG
TTTCCATTCAGACTTTCGTCGTCGTGTGCAACTGTCTTAAGTCCGAACAT
GGAGAATTGTCGCCTGCACCCGACTGTCCGTTGGAAGCATTACGTAATGG
AATTTTTCCAAATCTCTTTGTAAATCGAGCTCCGGCGTCAAAAACAGTAG
AGTATTTTTATACGAGGATGAAGACGTCATTTCTTCGAGAAACGTCGCAG
NNNNTCTCGATCGGGAAACGTCGCTCGGTTCGGAAGCGTATTGTTGATCG
GACCATACTGCCTTTTAACAGTCAAAACAAAGATGGCGGCAAAAATAAAC
AACTGGTCGCTACCGGTCTTTGGCTATTTTTCTTTGGTTTTTATGCTTTA
AAGAGTTGAATTGGATCATAGTTTTTGTATGATTGTTACAAGAAATGGTT
GATGATGAAGTTTTCTTATTATTATTCCTTCCTGAATTTGATGTTTCGTT
TGGTTTGGCATGAGAGATGATGCAATCTCTTCTTGAGATATTTTATCAAC
TTTCACAACAAACTAACTTCAATTTTGCCTGTATATTTACACGAATTCTA
ACTAGGCAGTTGACTGAATATTTGTGGATAAATCTGACCATGCTATATTT
GAAAAATTTTGCGACATCAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAAGTTTGAACTCACTTTTTTATGATGATGG
TCAGATACAGATGGTAGATGCGGCACCCAAGGAAATGGTTGTGGTTGGAT
ATGAACTGGTTAGCTTTAATGTAAAAACTTAAACCCAGAGCAAAATTTAC
TGATTGATGATTGATGTTGTAAAAATGCAACATGGAAAACTTTTGGTTGT
GTGAATTTGGACATTTTCTTGCACGTGCGTTTTAAAACTTGGAAATTCTT
GCTGTGAATTTGGACATTTTCTTCTACGTGCGTTTTAAACGTGGAAAACT
TTTGGTTATGAATTGGGACATTTTCTTCCACACGTGTGTTTAAAACGTGG
AAAACTTTTGGTTGTGAGTTTGGACATTTTCTTGCACGTGCGTTTTTTAA
AACGTGGAAACTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNATGAAAGTATATGCAAAATATTTCATCTATTTT
GAAAATATAAATTTTCCTTTGGTTTTCTTATTGTAAAATATTCTCAATTT
TTGATGAACAAGATCAATTTTTGGTAGATATTCTACCTACCTAGATATTA
CCCCCTGATTTAAGAAAACAAGAAAAGAGAAAAAGTATCCTAGGTTGAAA
TTTTAAGATATTTGACTTAAAAAAACTTCAAAAAAGCAGTTTCTTTTGAA
AAGAATCAATCAAATTTCTTTTGGTTCACCAGAGTTTGTACATGTTTAAA
ATGCATTGATAGAAATTTTCCTTGCTCTCGTGACGATCATGAAAATTACC
AAAAAAAGGTTTGTTCACCATGCAAATATCGCGAAAATAGCCCAAATCAT
GCCTCGATTTATTTCCCGATCACGCATCACCCAAACGGATGGGTACAACT
TTTTAAAATTGTATCATAAAATGGCTAACTTTCTCATTCCCGGGAAAACA
TACCTGCCCCGTCTCTGGGATCTTTTTGCTTCTAGGCGTCTCCGGCTAAA
ATCGGTGTTAAATCTACTTTTGTGGGATTTGGTCCTTTTCCGTTGTACAA
TCGGAAAGTTCCGCTGGGAATAAGGAAGTTTAGCAATCCTACGTTATGTA
GTGTAAAAAACCTTTCGCTTGCGAACACGAGATTTTCGTATCGTGCGTAA
CCCCTTTTACGTAACCCCTTGTACGTGCTAAAAAGTAAAAATCTTTCAAA
ACAGGGAAACAATTTCATATTTTCCGACAGAATGCACAAAAAAAAAAAAA
AATCTCATTTNTTACATTTTTTTTATTGACACTGTCGTTATGTATATTAT
ATAGATGTTATGGAGGAAATTTTTAACCGCATCTTTTGCGGCTCTTGTTA
TATACTGGGAAACATTTCATAAACTGAAAGAATGTCGATAGGAAAAAATT
CCCCTAACAGAAGCCATTTTATGATTTCCAAAAGCATGCTGCAAGAGCAA
AAAATGTCACATACAGTACTTGGAAACAATCAAAATTTCCAAAAAAATGT
CAGAAAATAAAATAAATTGTCATGCCAGGAGTTTTCTTCATTTTTTAAAT
GCATGTGGAAGAAAATGTCAAGTTCACGACAAAAGTTTTCCACGTTTTGA
ATGCACGTTTAAAAATTCTCTAAATTTATCACAAAAGTTTCCACGTTTTA
AATGTACATACCGCGTCAACTGCTTTAACTTGGGACAATTGGTCGAAACA
TGGGACTGTTTGATATCGGTCTGTATTTTCACTAACTTGCTAAATCTCTT
TGACAACAAATTTGTTTTGATAACTCCACCAAGTTTATCAATCATACTTC
CTTTCATAACATGTCACGATAACTTTCACTGATAGCGACGATTGGAGAAT
TAGAGAACGCCCGCTGCCTAACCGCCTATCGCCTGATGGGATTAACAAAT
AACGCATGTGTAACTTGCCGCGCAAGTGACGTCAAACGCTCCATGGTTTT
GCCATTTTTTTAATACGCCGTTCATTAACTCAAATCAAATGACTTTGGAG
GTTTGGTTAAATGGTGGCCAAATTGCCGTCCCATGTTTTGTCAGATAGTC
CCAAGTTGGAGCAGTTGATGGTAAGAAAATCTCCAAATTCACAACAATAG
TTTCCACGTTTAAAACATACGTTGCAAAAGATCTCTAAATTCACAACTAA
AGTTTTCCACGTTTTAAAATGCACACGGGGAAGAAAATCTCTGAAGTTCA
AGAAAAATTTTAATTGTACATGTGAGGTGATTTCAAATTATTTACATCCA
TATTCAATACAATAAACCTTTTAAGAAGTATAACATAACATTCTTCATAT
TGGGGCCGTGGTGTTCCGGATCCGGTTATCAGCTTTAAAATTTGAAATTT
ATAACCGCAACGAGGTCTCACTAACTGTCACTAACCAGCAGTTTAATTCA
TTGTTGTAGATAAAAAAAATTCAATCATTAACCAGTCAATTTTGCTCCAT
GTTTAAATTTTTAGCTAAAATCAGTTCATCAACCATTCCCATTGACGCAT
TGTTGCATTGTCGGCATTGCATTCGTTGGGTGCAAACTTTTTTCATATTG
CAAGTATGTAATTTTTCAGGTATAACATGGTCAGATTTATTCACAGTCAC
TTCGTACGATTTATGTAAATATACAAACAAAATTGAAGTTAGTTTGTTGT
GAAAGTTGATAAAATGTCCTGTTTTTGCCAAGACCAAGAGATTGTATCAT
CTCTCATTCCAGCTCATTCCAAACCAAAAGAATGTAAACGAAACGTCAAA
TCCAGAAAGGAATATTAAGAAAAGTTCACTATCGACCATTCCTTGTGACA
ATCGTACAAAAATCATGATCCAATATAAAATAGTAGCAAAAGAGCAAAAG
TTGTTGTCTATTTTCTGCCATCTTTGTTTTGACAGTTAGAAAATAAGCAG
TATGGTCCGATCAACAATACGCTTCTGAAACGGCCGACGTTGCCCGATCG
ACAAGGAGAATAGAGCGCCGTACGGATATTTTACCACAGACGTTTCTCGA
AGAAATGACGTCTTCCTACTCGAAAAAAGAACATCCTACTGTTTTTACCG
CCGGAGCTTGATTTAAAAAGAGACTCATGTACAAACTCACGAAATTGACC
AAAACCGAGCGTTAGACTTGGAGGAGAAGGAGAAGAAATACCTCCTTTGG
TATAATGTGCGCGCGGTCGACTAAGTTCCTATTAGCCTCCGTCTCAGAAC
GCGGTCAGAAAATTTTGCGGATAATTTCACAGCGAAAATGCATCCAGTGA
AATGTAAGTAATGTATCATGATTCAAGTNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNGTCGACTGACATAATTATACACATAATACATGTTACAAGTTCT
GCCTACGGATTCTCAAGCTCAGCTATTATAAAACTATTACATGTTAGTAG
CAGACCCGACTGATCAATGTTATGTAGCAGGTTGAAACACGAGTTTCTAC
TGGAAAGATACAGTTTGTTTTCAAGTTAAATCTTCAAAATAAAGCAAACT
GTGTGGGTTTCTTTACTTCCAAACAACCTACCAATAGTTTTGGAACACTC
CATAATAAAGGAAGATGGCTCTTCTTGTGGATTGGCTTTCTGGATACCCC
ATAAACACGATGTGACATGAAAGTGAAGAGACATGATTTGTTGGTTTTTG
TTTGATTTGTTGACTCATAATATCTCATGGCAAATGGGATAGCAAATGAC
TTTTCATGTATTGCTTGGCTCTACATATGATACCTCTAACTTTGAACACT
TCCAGAATGTTGAAAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
CTGCTTTCTGCTTGAAAACGCTGTCGTATAGCCGAAAACGAAAGTGAAAC
TGTGAAAACGTCCGCAAATTCGGGCCCAGTCCTCTTCCGAGACGGAGGCT
AATATATCACTCAACCACTTTCAAAATTCAGACTTCGTGTATGACTACAT
GACATCAATTTTCGTATCAATTTTTAAATCCTCAGATCACTCCGATCGAA
AGTGAAGGATCCTCAGTGCTTTATATCAATGTTTAGAAAAAGGGGTTACG
CGCGCTCCAGAACACTTAAGTACGTTCCTCCACTCTGTTTGCGTTGCAAA
TAATACTGAGGTAATCCAGGATAATCACGACAATCGGCGAAAAATTTAAG
GCTAGTGAAAATACGTTATTTTATTGGTTGAAACTCACTAGCCTGTTACA
TTTTTCGGCCGTTTTCGCGATTATGCCGATTTGCTAGTTAACCTCACAAA
TATTTAGAGTGTAGAGTCTTGAGTGAGAAGCACTAGTGAAAGGTGAAAAC
AACAGCTTTCTAATTGGATATTCTTTTTGCCGGAAATCTGTTAGGCAAAA
CTAGAGTGCCTTTTCTGGGTAAATATGTCGGGGGAAAGTGACAAAAATTA
TAAGAATTAAGGCGACGACATTTTTCCCAGTTGAAAAAACTTTTATTTAC
CTGGTTTTTTATCCCCGGCCGAAAAATTTTACAACAGCCTCAGGATCTAT
AAAGTCCAAAATATCTGAAAAACACATTGGCCAAAGGGAATGTAAAAAGA
AATTCCAAAATACCAAAATTCTAAAAATTTAAAAAAATCCCGAAAATCAA
GTATATTGCACGGGCCCCGCAAAAACACATTTCAGTCCCATTCAAGTCAC
TTTTTTTCAAAAGAGAGTCCCACGAACGAAGAGTCAATTTTTCGAACCTC
TCGCTGAGAGAGTGGATCAGCCCTTTTACCAACCTTGTTCCCTAAGTATT
ATCAGCCTTTTTATGCTTTACTGATAGCGCCCTTTTACTTCCGCCTTTTA
GTTTCGAATGTTTTTATTCGAAAATCTAATTCGAACGTTTATAGATTCGA
ACGAAAATATTCGATTTTAGTGTTTGCATCTTTTGACTATGACAAAATAG
AGAAGCATTTTTCGATCCCAGAAGTTTTGTTTCGCAGTGGGGTGTTGCAT
ATTTTTCAGAGATGTATTTGAAAGTTTCTAGACTGTTAATTGAAAATGCA
GATGGTGTACAGTATTATTTCGATAGAAAAGAAACCACCCTTCATCATTG
GATTAATCAAATTGAAAGCACTGAGTTTTTTTCTATGTTTTTGTTTCGAT
ATGCATGGAAAAGAAAAGCAGAGGAAAGGAGTTCCATGATTGAAACGTAC
GCGTTGGTTGTAATAATGGTTAAAAAAGACAACATTTTTGAAACAGTAAA
ACAATGTGAATAATTTCTTGATTATCGTCAAGCCGTAATGATTGTTGAGA
TTCTCGCTCGTCATATGGTTTTTAAATACAAGACATTACATTCAGTTACA
TTTCCCTTATTATGTTATCAGAAATCTCGCATATTGGCAAACATTCAAGA
ATCTCAAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTTGAATATGAAACTCTTTACCTTGAAACTTTGTCTTCACAATT
AAACCACAGTAATGTCTATGGTTAAAACCAAGAACCAACAAACAAACTGT
ATCTTACTCTTAGTAGGTTCTTAGTAGCAGGAGGGCTAATTGGCTAATTT
TAATTCTAAAAAGCCAAAAATAAGCTAAAATCAGGCTTTATAGAGCAAAG
TAAGCCCTTCCCTCTGTCAGCCGAAAATATTTTTACAAATCAATAAACGA
TGGGATTTCGTTTTGAGCAATCTCATTATTTAAAATATAAAGCACTGAGA
ATCCTTCACTTGCGATCGGAGTGATCTGAGGATTTAAAAATTGATACGAA
AATTGATGTCATGTAGTCATACACGAACCTTGAACTTTGAAAATGGTTGA
GTGATATATAGGAACTTAGTCGACCGCGCGCACATTATACCAAAGGAGAA
ATCAATGTTTAGAAAAAGGGGTTACGCGCGCTCCAGAACGCTTAAGTACG
TTCCTCCACTCTGTTTGCGTTGCAAATAATACTGAGGTAGGCCAGAATAA
TCACGACGATCGGCGAAAAATTTAAGGCTAGTGAAAATACGTTATTTTAT
TTATCGGTTGAAACTCACTTAGCCTGTTACATTTTTCGGCCGTTTTCGTG
ATTATGCCAATTTGCTAGTTAACCTCACAAATATTTCGAGTGTAGAGTCT
TGAGAAGCCCTAGTGAAAGTGAAGGTGAAGACAACAACTTTGNAGTATAT
TGCACGGGCCCAGGGGGGAGCAGGGGTACCTTTTTTCACCTTCACGAGTG
TCCCAGGTAAATGCCGCAAAAACACATTTCAGTCCAAATCAGGTCATTTT
TTTTCAAAAGAGAGTCCCACGAACGAAGAGTCAATTTTTCGAACTTCTCG
CTGAGAGGGCGGAGCAGCCCTATTACCAACCTCGTTCCCTGCGTATTATC
AGCTTTTTTATGCTTTAACTGATAGTGCCCTTTTACTTCCGCCTTGTAGT
TTCGAATGTTTTTATTCGAAAATCTAATTCGAACGTTATAGATTCGAACG
AAAATATTCGATTGTTTGCATCTTTTGACTATGACAAAATAGAGAAGCAT
TTTTTGATCCCAGAAGTTTTGTTTCGCAGTGAGGGGTGTTGCAGATTTTT
CGAGATGTATTTGAAAGTTTCTAGATCGATAAGTGAAAATGCCAGATGAT
GTACAGTATTATTTTGATAGAGAAGAAACCACACTTCATCATTGGATTAA
TCAGATTGAAAGCACTGAGGTCTTTTCTATGTTTTTGTTTCGATCTACAT
GGAAAAGAAAAGCAGAGGAAAAAGGAGTTCCATGATTGAAACGTATGCGT
TGGTTGTAATAATGGTTAAAAAAGACAACATTTTTGAAACAGTAAAACAA
TGTGAATGATATCTTGATTATCGTCAAACCGTAATGATTGTTGAGATGCT
TAAAAAGTCAAGGACGTACCTTTGTCGCAAACGTGAGAATTGGGAGAGAA
CTTTTATAAATAATATCGATCGCTCGTCATATGGTTTTTAAATACAAGAC
ATTACATTCAGTTACATTTCCCTTATTATGTTATCAGAAATCTGGAATCA
TATTGGCAAACATTCAAGAATCTCAACTTTTTTGTATGCAGTGATGAAAA
ACTGTTTGGTTTCACACACAACACACGGACAATACCAAAAGCTGAAAATA
TTTAGATCATGTCAAGTAGTTTTATAAATTTCTTAGTTCATCAGATTTGA
TTTTAGTGTATTTTATGGAAGAACTCCAAATTAAAAGCTCATCTGAAAAT
ATTTTTGTTGCGTTTTCCCCCTTTGCCTTTGTCTTTGACACTTCCCTACT
CTGAAAGTCATCTTTTCGACTGTTTTTGATTTGATTTTTCTCAGACAGGC
CTGTCTGTTGTTGTTGAGTACTGTATGAAGATTTTAACTTGAATATGAAA
CTCTTTACCTTGAAATCTTGTCTTCACAATTAAACCACAGTAATGTCTAT
GGTTAAAACCAAGAACCAACAAACAAACTGTATCTTCGACTTACTCTTAT
TATTAGGTTCTTAGTAGGGGGAGGGCTAATTGTTGGAGGGGTTGGAACTT
TTAATTCTAAAAACCCAAAAATAAGCTAAAATCAGGCTTTATAGAGCAAA
ATAAGGAGCCTTCCTTCCCTCTGTCAGTCAGCTGAAAATATCTTTACAAA
TTGATAAACGATGGGGGGTCCTATTAAGGTCCGGGGGTTGGAAGATTTTC
GTTTTGGAGCAATCTCATTATTTAAAATATAAAGCACTGAGGATTCTTCA
CTTGCGATCGGAGTGATCTGAGGATTTAAAAATTGATACGAAAATTGATG
TCATGTAGTCATACACGAAGTCTGAATTTTGAAAATGGTTGAGCGATATA
TAGGAACTTAGTCGACCGCGCGCACATTATACCAAAGGAGACGCACTGCG
CGCGTAATTATCAATGTTTAGAAAAAGGGGTTACGCGCGCTCCAGAACGC
TTAAGTACGTTCTTCCACTCTGTTTGCGTTGCAAATAATATTGAGCTGAG
GTAATTCAGGATAATTACGACGATCGGCGAAAAATTTAAGGCTAGTGAAA
ATACGCTATTTTATTGGTTGAAACTCACGAGCCTGTTACATTTTTCGGCC
GTTTTCGTGATGATGCCGATTTGCTAGTTAACCTCACAAATATTTAGAGT
GTAGAGTCTTGAGAAGCACTAGTGAAAGGTGAAAACAACAGCTTTTTAAT
TGGATCTTTTTCCGGGAAATCTGTTAGACAAAACTAAAGTGCCTTTTCTG
GGTAAATATGTCGGGGGAAAGTGACGAAAATTATAAGAATTAAGGCGACG
ACATTTTTCCTAGTTGAAAAAACTTTTATTTACCTGTTTTTTTTATCCCC
AGCTGAAAATTTTACAACAGCCTCAGGATCTATAAAGTCCAAAATATCTG
AAAAACACATTGGCCAAAGAGAATGTAAAAAGAAATTCCAAAATACCAAA
ATTCTAAAAATTAAAAAAAATCCCGAAAATCGAGTATATTGCACCGGCCC
AGGGAGCGGGAGTACCTTTTTTCACCTTCACGAGTCCCAGGTAAATGCCG
CAAAAACACATTTCAGTTCCATTCAGGTCGCTTTTTTTCAAAAGAGAGTC
ACACAAACGAAGAGTCAATTTTTCGAACCTCTTGAGTCTCGCTGAGAGAG
CGGAGCACCCCTTTTACCAATCTCGTTCCCTGCGTATTATCAGCTTTTTA
TGCTTTACTACCTGTTACTACTGATAGCGCCCTTTTACTTCCGCCTTGTA
GTTTCGAATGTTTTTATTCGAAAATCGAATTCGAACGTTATAGATTCGAA
CGAAAATATTCGATTTTAGTGTTTGCATCTTTTGACAAAATAGAGAAGCA
TTTTTCGATCTCAGAAGCTTTGTTTCGCCAATGTCAATTGAATACTGTAT
ATTTCTAGTGACTATGGTTTCGCAGTGAGGGGTGTTGCAGATTTTTCAGA
GATGTATTTGAAAGTTTCTAGATTGATAATTGAAAATGCAGATGGTGTAC
AGTATTATTTCGATAGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAGTTCCA
TGATTGAAACGTATGCGTTGGTTGTAATAATGGTTAAAAAAGACAACATT
TTTGAAACAGTAAAACAATGTGAATAATTTCTTGATTATCGTCAAACCGT
AATGATTGTTGAGATTCTTAAAGAGTCAAGCACCTAGCTTTGTCGCAAAC
GAGAGAATTGGGAGAGAACTTTTATAAATATCGCTCGTCATATGGTTTTT
AAATACAAGACATTACATTCAGTTACATTTCCCTTATNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNGAAATCTCGCATATTGGCAAACATTCAAGAA
TCTCAAATTTTTTGTATGCAGTGATGAAAAACTGTTTGGCTTCACACGGA
CAATACCAAAAGCTGAAAATATTTGAATCATGTCAAGTAGTTTTATAAAT
TTCTTAGTTCATCAGATTTGATTTTAGTGTATTTTATTGAAGAACTCCAA
ATTAAAAGTTCATCTGAAAATATTTTTGTTGCGTTTTCCCCCTTTCCCTT
TTACTTTGACACTTCCCTACTCCGAAAGTCATCTTTTCGACTGTTTTTGA
TTTGATTTTTCTCAGACAGGCCTGTCTGTTGTTGTTGAATACTGTATGAA
GATTTTAACTTGAATATGAAACTCTTTACCTTGAAATTTTGTCTTCACAA
TTAAACCACAGTAATGTCTATGGTTAAAACTTAAAACCAAGAACCAACAA
ACAAACTGTATCTTACTCTTATTAGGTTCTTAGTAGGGGGAGGGCTTATT
GTTTGAGGGGTTGGAAATTTTAATTCTAAAAACCTAAAAATAAGCTAAAA
TCAGGCTTTATAGAGCAAAATAAGGAGCCTTCCTTCCCTCTGTCAGCTGA
AAATATTTTTACAAATTAATAAACGATGGGGGGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCATACACG
AAGTCTGAATTTTGAAAGTGGTTGAGCGATATATAGGAACTTAGTCGACC
GCGCGCACATTATACCAAAGGAGACGCGCTGCGCGCGTAATAAAACATCG
ATTTTTTTGTTTCTTTAAGTTTCTTTTCACTCTAGTAAGTGTCAAATTTG
TCTACTTTTATTTAGTGATTAAGGGTATCTTGTCAGTCGATATTCAAAAA
TTTTCTAGTCGGCCCCAACCATGGTGGGGCCTGTTTATCCCTTTTCTATT
CATCAAAGATATATCTACTCTTATCCATTAAAACATTTCCTTCCTCGTTA
TGCCTAGGCAAATGAATTAGTAAAAGTTTAGAAACTGGTTGGTGGGGCGC
CATTTAAAGAAAATTGACTTTGGCCCCTCCAGAAAAATTTTCCCACATCG
CAACTGCGAAGGTACCGATCAAAACATTGCATTTTGCACAATGGCATGTA
TTGGTAATTTCCAACTTTTGAAAATTTTTTTTAACTTTCTGAAGAAATCA
GCAAAAATTAGCATAATTTGCTTTGTCTTAAAAAATGATGACATCAATGC
CTTTGCAAAAAGCATTTTTCATGAATTGTTTCTTATCAATATAATGCTTC
TAAGGTGAGAATTTCACCCTGTTTTGATTATTAGTTTTTGAAATACATGC
CATAAGTTGCACGAGTCTCCTTAACTTTTTTTCATAGCTCAAAAGAAGCC
TATAATGTGAGAATATAAAGTCTATTTCAAATTAGCTGGCAGTGTTTTTT
CAAAGCTCAACACTTTTTGATAGAATTTGGATTAAGTAGTTATTCTGCGC
TTGTTGCAAGGATCGTCGGGAATGGGATATGATTTTGATAAAAATTTTAA
TGAAAAATCGAAAATGAAGAAGAAAAAAGAAAAAGAAAAAAATCAACTTC
GCTTGGTATTCAAGCATTTATTTTCAAACTTTTGGCCAGCAAAAGTACGA
ATAAGTCTTTCTTTTAGAAATAAGAGTATTAATCATTTTCCAAAATCAGA
GCCCTTCGAGCCGCCATGACAGTTGTCCTTTGCGGACAAAGCCTGTATGT
AAATGTCGATCGAGTCGAAATGGGAGTCAACACAAGTCACGAACGACACT
TTAGTTAAAACGGAGCCAAAGGTTTTCTTTGACGCATCTTCACTGTGGAA
AATGGCTAAAAATGAATAAAATAACACATTTTAGCTAGCGAAATATAAAT
ACAGTACAAGTGAAAATATAAAGATACATCAGTTAGATTACAAAGACAAG
TCAAAGATATCTATATTATAATACGCTTAAATCGGAACTCTCCCATTCTC
GTATGAGGCTTTTTCGCTAGCGATTTTTAAATACACGGCAATTTTTTTCG
CGCCTTTTTGATTGTATATTCAATTCTATTCGCCAAGTGCACTTCCATTC
AAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACAAAT
CCCTACAAGTTTCTGAAAAATAGAAAAGCGAGCGAAGCGAGCGTATTAAA
AGGAGTAAGAAGTCGTCTCGGACGACGCCGGGACGGCTAGTAACATATAA
AGAAGAAATAGAAACTTACGTACTAAAAACACTGTGGCTGAACATACATG
TACGCGTCAACAGATACTTTCAACTAACACTCACAATTCCAATACGCAGG
TTTATAACACATCACAACAACTCATACAACAACTAGACAATCCTCAAGGG
ACGAACACATAACTATACGCACAATACGGCACTATACAATACAATACGCA
ACTCCCTAGACACAAAATATAGACAATACACGTGGGACTAATACAAATTA
TATAATAATCATTTACAGTTTCACTACAAAAGTCCTATCAAATAATAAGT
CTAAGTACAAAGGAAACGATGAAAACAAACGTAAAACTAAAAGACAAATT
AGCTGCATTTTGGCAGTTACACTGTACATCGATTGTTTTCTGAAACAATG
GAAAAACAATACTTCGCTCTCCACCGCTTCATTCGATGTTCAGCCAGAGT
CTCTATAACAAATCCATGAGTTGACTTTATTAGACAGAATAGGAAAATTA
AAAATTGATGAAATATCAGTGGGTAACGTATAAGTACATTTACGTACGTA
ATCAATCGTGCAACTTGTGTCTAGAGGGATTTAATGGATGATATAGTAGT
TTTATTAATGGTGTCTAACTATTTAGCAGTAAATTTTGTAACAATAACAA
ATACAATTCTTTTAAATGATACAAAAAGAATGTAATGACAAATTTTCTTT
TTTTGACACGAAATACAGGGTGTCCCGAAAAAAAGTATCGAGTCGTACCC
AATGAAGTATAAGCCCGAAATATCAATCGTAAACAAAGGAATTGCTAGAT
TCAATCTGTCGTCAAAAATGCGGCGCATTTTTTAAGGCTTCACTTTTTCT
TGCCTGAGAAAGGTTAGAGATTGAACTCTAGCCCTTCGGGCTTTAAACTC
AATGGTCGTACCACTTCTATAGAAAGAAAGTTCTTGTTTGTGTTTCACTA
GATTTACTATATTTTTCAAAGTTTCTATCCGTGTCATTTTAATTGTACTT
AATTGTCATGAGACATCTTTTATGAATAACTTTTACAAAAAACAATTCTC
AATAACTTTAAAGCCTTTAAAGTCGTGAAAATTGTAAAGAAAGTTAATTC
TTTTTAATCATAATGACTGTTGCAAAAACAATTATTTTGTCGGGAGGGGT
TTATAGACTTCCAGGCTATATTCTGAGCCCTATTGGACTATTCTTGAACT
TTTGGATCCTTAGATGCTAAGTTCCTCAGTCTTAAGTCTAGCGTTAAAAC
TCAGAGTTAAAACTCTACCCTTCCAACCTAATTTAGAGCACTTCCAAATC
GTCTGTGGTTATAAGATTTCGTAGGTATTTCCGTTTTTCTCAAATATTAC
GACCATAATTGTAGAAAATATATATTGACGTGATGCTGTGAATTTTCGGT
CTACTTGGACAGACTACTGAAAGGCCTCAATTTAAACAAATTGAGTTACT
TTAAATACAAACACCTAATGTAATAATAAAATAATGACTTTATCATTTAA
TAAGTTATGATTAAATTTTAGATATGTTGCACTGCCAAAGAACTTTCACC
GTTGATAAAACACTGATCTACACACACAACTCTGGAGTGGATGATGATGT
TCATCATTACAAACCAACAAAACCCATAACAGAGGAACAAGAATGTAGAC
CGATACGAACTGGTCCAAGCATTACGAAGACTGTTGCCGACTTTAGAGAA
AGATCGTTACAGTATTTTACAGAAAACACAGTCGCAAGAGAGCGACATTT
TCCGCCGTCATATTACTTGAAAAATGAAAACATTAAAGATTGGTTAGAAA
AATTGGACAAGATGGAAATGTTCAAAAATGTGAAGTTTTTGACACAATAT
CATCCGAGAAACCATTTGTACCTCATGGGGCTGGATGATAAGGATTGTGA
TGAAATCATAACAGCAAAACATAAATTGTATGATGACATCATTCTGGTTG
TTGATTTTGATCGTCATCTGGTGATGATATGTTCTATCATCACTTCACAT
GATCGAGAAACTCTGTATCAAGAAATACGGAAACTTAATGACGTTACAAA
AACAATTATCCATGTAGCCAGTAACGACATAAAAAATGACTACGTCACCA
TTATGTCGGTCCCAGTTCTCCTTACCGTTGAAGCGCACACTTTAAACCTG
TATTCAATATTCAATGACAATTTTCTTGGTTGCAGTGGAATGTTGGTCAC
TAAAAACGATTTAGATTGCAC

Coding sequence (CDS) from alignment at sc0002330:7021..27241-

>TCONS_00040155 ID=TCONS_00040155|Name=TCONS_00040155|organism=Clytia hemisphaerica|type=CDS|length=1578bp|location=Sequence derived from alignment at sc0002330:7021..27241- (Clytia hemisphaerica)
ATATGTTGCACTGCCAAAGAACTTTCACCGTTGATAAAACACTGATCTAC
ACACACAACTCTGGAGTGGATGATGATGTTCATCATTACAAACCAACAAA
ACCCATAACAGAGGAACAAGAATGTAGACCGATACGAACTGGTCCAAGCA
TTACGAAGACTGTTGCCGACTTTAGAGAAAGATCGTTACAGTATTTTACA
GAAAACACAGTCGCAAGAGAGCGACATTTTCCGCCGTCATATTACTTGAA
AAATGAAAACATTAAAGATTGGTTAGAAAAATTGGACAAGATGGAAATGT
TCAAAAATGTGAAGTTTTTGACACAATATCATCCGAGAAACCATTTGTAC
CTCATGGGGCTGGATGATAAGGATTGTGATGAAATCATAACAGCAAAACA
TAAATTGTATGATGACATCATTCTGGTTGTTGATTTTGATCGTCATCTGG
TGATGATATGTTCTATCATCACTTCACATGATCGAGAAACTCTGTATCAA
GAAATACGGAAACTTAATGACGTTACAAAAACAATTATCCATGTAGCCAG
TAACGACATAAAAAATGACTACGTCACCATTATGTCGGTCCCAGTTCTCC
TTACCGTTGAAGCGCACACTTTAAACCTGTATTCAATATTCAATGACAAT
TTTCTTGGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTGCAT
GGCATCGGGGTTCGTTCATTTTATTAAAATGAAAACATTGCAAACTGATG
GCACCAATGAAGAGTTTGTTGTTAATGTCAAAGGAAGAGATATGTTGCAC
TGCCAAAGAACTTTCACCGTTGATAAAACACTGATCTACACACACAACTC
TGGAGTGGATGATGATGTTCATCATTACAAACCAACAAAACCCATAACAG
AGGAACAAGAATGTAGACCGATACGAACTGGTCCAAGCATTACGAAGACT
GTTGCCGACTTTAGAGAAAGATCGTTACAGTATTTTACAGAAAACACAGT
CGCAAGAGAGCGACATTTTCCGCCGTCATATTACTTGAAAAATGAAAACA
TTAAAGATTGGTTAGAAAAATTGGACAAGATGGAAATGTTCAAAAATGTG
AAGTTTTTGACACAATATCATCCGAGAAACCATTTGTACCTCATGGGGCT
GGATGATAAGGATTGTGATGAAATCATAACAGCAAAACATAAATTGTATG
ATGACATCATTCTGGTTGTTGATTTTGATCGTCATCTGGTGATGATATGT
TCTATCATCACTTCACATGATCGAGAAACTCTGTATCAAGAAATACGGAA
ACTTAATGACGTTACAAAAACAATTATCCATGTAGCCAGTAACGACATAA
AAAATGACTACGTCACCATTATGTCGGTCCCAGTTCTCCTTACCGTTGAA
GCGCACACTTTAAACCTGTATTCAATATTCAATGACAATTTTCTTGGTTG
CAGTGGAATGTTGGTCACTAAAAACGATTTAGATTGCATGGCATCGGGGT
TCGTTCATTTTATTAAAATGAAAACATTGCAAACTGATGGCACCAATGAA
GAGTTTGTTGTTAATGTCAAAGGAAGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024359XLOC_024359Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040155-proteinTCONS_00040155-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040155-exon-sc0002330-1575043694:26858..27241TCONS_00040155-exon-sc0002330-1575043694:26858..27241Clytia hemisphaericaexon
TCONS_00040155-exon-sc0002330-1575043694:7021..7720TCONS_00040155-exon-sc0002330-1575043694:7021..7720Clytia hemisphaericaexon
TCONS_00040155-exon-sc0002330-1510915933:26858..27241TCONS_00040155-exon-sc0002330-1510915933:26858..27241Clytia hemisphaericaexon
TCONS_00040155-exon-sc0002330-1510915933:7021..7720TCONS_00040155-exon-sc0002330-1510915933:7021..7720Clytia hemisphaericaexon
TCONS_00040155-exon-sc0002330-1491911889:26858..27241TCONS_00040155-exon-sc0002330-1491911889:26858..27241Clytia hemisphaericaexon
TCONS_00040155-exon-sc0002330-1491911889:7021..7720TCONS_00040155-exon-sc0002330-1491911889:7021..7720Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002330supercontigsc0002330:7021..27241 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.221952	0.0604567	0.179725	0.0449141	0.109357	0.129623	0.715057	0.901723	1.28103	1.45424	1.8742	1.34888	7.89728	6.13509	8.01288	8.34054	4.43962	6.86375	9.55565	8.6904	4.90461	4.56104	2.95499	4.29339	4.77654	4.17612	21.3015	17.5358	23.4387	27.6357
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040155 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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