TCONS_00040091 (transcript) - C. hemisphaerica

Overview
NameTCONS_00040091
Unique NameTCONS_00040091
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length138

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00040091 ID=TCONS_00040091|Name=TCONS_00040091|organism=Clytia hemisphaerica|type=transcript|length=138bp
GTACATTTAAACTTTATATTAACAATGTGGTGGGAGTTATCtccttggaa
aatttgatgtcccttccgttatggatgtcccttccgttacgcctTTTTTA
AAAGGGAGTGTTACAGGGACTTGGATGTTCATTATAGT
Run BLAST on NCBI

transcript from alignment at sc0002305:10660..10797

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00040091 ID=TCONS_00040091|Name=TCONS_00040091|organism=Clytia hemisphaerica|type=transcript|length=138bp|location=Sequence derived from alignment at sc0002305:10660..10797 (Clytia hemisphaerica)
ACTATAATGAACATCCAAGTCCCTGTAACACTCCCTTTTAAAAAaggcgt
aacggaagggacatccataacggaagggacatcaaattttccaaggaGAT
AACTCCCACCACATTGTTAATATAAAGTTTAAATGTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024309XLOC_024309Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00040091-exon-sc0002305-1491911889:10660..10797TCONS_00040091-exon-sc0002305-1491911889:10660..10797Clytia hemisphaericaexon
TCONS_00040091-exon-sc0002305-1510915933:10660..10797TCONS_00040091-exon-sc0002305-1510915933:10660..10797Clytia hemisphaericaexon
TCONS_00040091-exon-sc0002305-1575043694:10660..10797TCONS_00040091-exon-sc0002305-1575043694:10660..10797Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002305supercontigsc0002305:10660..10797 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00040091 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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