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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040075 ID=TCONS_00040075|Name=TCONS_00040075|organism=Clytia hemisphaerica|type=transcript|length=916bp
CTTCACTTTATCTTGTTGTGCcctttcttattttcatcactttgaaaaaa
taatttctaccTACTATGtacaatttataatttttttacaaaatagaaaa
tttgaaaaatcgtttcattagaaaaaactaaacgTAAAAAAGCAAGAACT
GAACCTTATTTCGTGTATCTTGTTCCCTTTGAACGGGCAGTGGGAGTGAT
AGCGATTGGCAGCGAATGAATTTCTTCATCTTTCTTATTTCATTGGTAAA
CACTACAAACCTGTCAGTTCATGTGGATAAATTGAGACTGTGATGGTGGT
GGCTCGCATTGATATTTATTAAGAATTTAAAACTATCGTAAACAGTTTGT
TACTTAAGTTGAGAATATACTCCTAAAAGTTTAAATTGTTTATGGCATGA
TATACTCAGAAGTAAAAATTATTATCTCCACCACATCTCCAAGTGAATTC
GATTTCGTATCGAATTCGTACATATTTTCTAATTCTCATTGGTCACCCAA
AAGCTCCATAAAACGACGTAAAGCCATCTCAACTTGTCACCACCGTCTCC
GTGTTTCCAACGTAACGTAGTCTTCATCATCGTGGAGTCAATAACGTTCT
CACACGAGAAAAGATTGTAGGAATTCTTCGCCCGTCACAATGGCCGTCGT
TAGAATAATGAAACGATATCCTGTGAAGAATAATGGTTGTTGTGTTTAAA
AATATATGATAAAAGATACTATGTATTATCTGaatcgaggggtaaatcac
tcgaaaaagtagaaaaatggTGTACAAGAtttgtgatttatttttgattt
atttcttattaataaaattgtgtacgagatttattttagtgatttgcccc
tcgatCTAAATCTTAACCGAAAACGTTCATAAATGctgcatgtttttttt
ataagcaagtgtctgc Run BLAST on NCBI transcript from alignment at sc0002301:3873..5066- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040075 ID=TCONS_00040075|Name=TCONS_00040075|organism=Clytia hemisphaerica|type=transcript|length=1194bp|location=Sequence derived from alignment at sc0002301:3873..5066- (Clytia hemisphaerica)
CTTCACTTTATCTTGTTGTGCCCTTTCTTATTTTCATCACTTTGAAAAAA
TAATTTCTACCTACTATGTACAATTTATAATTTTTTTACAAAATAGAAAA
TTTGAAAAATCGTTTCATTAGAAAAAACTAAACGTAAAAAAGCAAGAACT
GAACCTTATTTCGTGTATCTTGTTCCCTTTGAACGGGCAGTGGGAGTGAT
AGCGATTGGCAGCGAATGAATTTCTTCATCTTTCTTATTTCATTGGTAAA
CACTACAAACCTGTCAGTTCATGTGGATAAATTGAGACTGTGATGGTGGT
GGCTCGCATTGATATTTATTAAGAATTTAAAACTATCGTAAACAGTTTGT
TACTTAAGTTGAGAATATACTCCTAAAAGTTTAAATTGTTTATGGCATGA
TATACTCAGAAGTAAAAATTATTATCTCCACCACATCTCCAAGTGAATTC
GATTTCGTATCGAATTCGTACATATTTTCTAATTCTCATTGGTCACCCAA
AAGCTCCATAAAACGGTAACAATAAATGTTCAAATAACATTCATCTTAAC
GTCGATATAGCAAACGCATGTTTGTATCAAAAGGTCTATGATTAAAATAT
CACTTCATCACACAGATTCCAAAGTTATTCGTGATACTTGCTAAAAGTCT
TGGTCAGATATCATTTTTGAATATCCAGTACGATAAAAAACTTCTTCGTG
TGAACCTCAGTAAGTTGGCAAGTATACTAAAATGACATCAAACCAGTATA
CTAAAATGACGATTAATCTTTTCTCCGCTGTCCCTTCTTATAGACGTAAA
GCCATCTCAACTTGTCACCACCGTCTCCGTGTTTCCAACGTAACGTAGTC
TTCATCATCGTGGAGTCAATAACGTTCTCACACGAGAAAAGATTGTAGGA
ATTCTTCGCCCGTCACAATGGCCGTCGTTAGAATAATGAAACGATATCCT
GTGAAGAATAATGGTTGTTGTGTTTAAAAATATATGATAAAAGATACTAT
GTATTATCTGAATCGAGGGGTAAATCACTCGAAAAAGTAGAAAAATGGTG
TACAAGATTTGTGATTTATTTTTGATTTATTTCTTATTAATAAAATTGTG
TACGAGATTTATTTTAGTGATTTGCCCCTCGATCTAAATCTTAACCGAAA
ACGTTCATAAATGCTGCATGTTTTTTTTATAAGCAAGTGTCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040075-exon-sc0002301-1575043694:4552..5066 | TCONS_00040075-exon-sc0002301-1575043694:4552..5066 | Clytia hemisphaerica | exon |
| TCONS_00040075-exon-sc0002301-1575043694:3873..4273 | TCONS_00040075-exon-sc0002301-1575043694:3873..4273 | Clytia hemisphaerica | exon |
| TCONS_00040075-exon-sc0002301-1510915933:4552..5066 | TCONS_00040075-exon-sc0002301-1510915933:4552..5066 | Clytia hemisphaerica | exon |
| TCONS_00040075-exon-sc0002301-1510915933:3873..4273 | TCONS_00040075-exon-sc0002301-1510915933:3873..4273 | Clytia hemisphaerica | exon |
| TCONS_00040075-exon-sc0002301-1491911889:4552..5066 | TCONS_00040075-exon-sc0002301-1491911889:4552..5066 | Clytia hemisphaerica | exon |
| TCONS_00040075-exon-sc0002301-1491911889:3873..4273 | TCONS_00040075-exon-sc0002301-1491911889:3873..4273 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002301 | supercontig | sc0002301:3873..5066 - |
Blast
The following BLAST results are available for this feature:
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