TCONS_00040056 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00040056
Unique Name	TCONS_00040056
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1929

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0002292:12071..22012-
coding sequence from alignment at sc0002292:12071..22012-

transcript sequence

>TCONS_00040056 ID=TCONS_00040056|Name=TCONS_00040056|organism=Clytia hemisphaerica|type=transcript|length=1929bp
Ttccgaagaagaagaagacgaagaagaagaagaagaaaaagaaagagaag
aaaatccAGAAGTacgtgaaaatgaagaagaaaaagaacaagaacaagaa
ggagaaaaagaaaaatctgaagttgaaacAACTGAAAAGATCTACGTGAA
GTGCTCTCGCCACAGGAATAAGAAAAGGGTTTGGGACAAGAAGTATCATT
GCCTGTTTTGCCCGAAGAAGGGAGCAAAACTTGTTGGACACTGGCAGAGA
AGGCACCGGTCAGAGCCTGACGTTGCCCAACTGGTTTCCCTAAGCTATAA
AAAAAGTGACAGTCTGGAAACACGAAAGTATAAAAAGAAAGCAAGGCGCC
GCATTATTGACAAACTGCGACGAATAGGGAATTACAGGCACAACATGAAG
GTTCTCACAGAATTGAGGGGGGAACTGATCGTGAAGAAACGCCCGATCAA
AGCGACCAGCTTTAAACAATTCCTTCCTTCCGAATTTTGCTTGGAGTTTT
ACTACCGCCGTGATCTCCGTCGACACATGGAAAACTGTCCTTGCCGAAGT
GACAGGAGAGTTGAGGGACGTGTCCAGAGCAAGGCAGTCCTTCTGCTACC
AGTGAGAAAGGAAGTTTCAAATGACTTGAACAAGATCATTTCTAAAATGA
GGGGAGACGAGGTGGGAAACAAAGTTAAGATGGATCCAACAATAATTAAA
TATGGTAACATGCTTTGCCGCAAGCACCTCAACAATGATGATCAAGAATA
TCATATTAGCAACAAACTACGCGAACTGGGAAGATTCCTCGTCGCAATGC
AAAGAAACCCAGAATTGCGCCAAAATGATCTGCAGGGAATGATTCGACCT
CAAAACTTTCCAACCGTTATCGAAAGCATTCATCAATTGTGTGGCTGGAA
TGAAGAACAGAGAACGGTTGAAACACCTTCATTAGGAATCAAATTGGGGC
AACTTCTAAACAAAGTTTGCTACCTCCTCAAAGGCGAGGCTATCATTGAA
GGAAATTCGGCTTTAAAGCAAGACGCGGACGATTTTGCAACTCTCGTTTC
AATGAAATGGAATGATGAAATAGCGAAAGTTTCACGTATTGCAAAGAAAT
GGAATAAGCCACAGCTGCTGCCTTTAACCGAGGATTTAAagaagctgaaa
aatcacctcCTCGACATCCGCCAGGAGTCGTTTGATGCGCTGGCCCGCGA
CAACTCGGATACAAAAGCTTGGCGAAACCTGGCCACTGCAACCCTGACAG
CTATCATTCTACTTAACAGAAGACGAAGTGGGGAAGCTGCAAAACTTAAA
ACTGCCAATTTCGAGGAAGcactaaaaaatcaaaaaGGCACGACGTCAAA
ATCCACAAAGAGTACTACCGTCTTCAGGAATCTACCCTACAAGTTGCAAA
GTGTGGCAAAATCTTAATGTTGTTGGAGCAGGGAAAGATGGCGGATTTCG
CAGGAAAATCATTGAGTGAAATTGATTTGGATATCAATGAAATTCACTCT
GACTTGGAGGATGGTGACGACGACGATGAGGTCGAGAGCGATAGTGAGGA
CGAGGAGAACGAAGAGGAAGAGGAAGAGgaagagaaagagaaagagaaag
aaaaagacgAAAACCTACCAAAATCTATAAAAGTTGCAAAGAAAAAGAAG
GCTATCTCcaagaaaaaagaatcaaagaaaACACCAGTCAAAGcTCGCAG
GCAGTGGTCAAAGGAGCAACAAAGTGTGATGAATGAAGATTTTGACTCCT
GCTTTAAAGCACTCAAACCCCCTGGGAAAAAAGAATGCGACGATGTTATG
GAGAAACACTTTCCGTTGTTCGCCTCAAGAGAGTGGCTTGATTTGAAATA
CTATGTTCATAATAAGATTAAGAACCCTGCGAAAAAGGCAAAGACACTGG
CACAAAGGGCGGCAAGAAATGTTACAANN

Run BLAST on NCBI

protein sequence of TCONS_00040056-protein

>TCONS_00040056-protein ID=TCONS_00040056-protein|Name=TCONS_00040056-protein|organism=Clytia hemisphaerica|type=polypeptide|length=471bp
SEEEEDEEEEEEKEREENPEVRENEEEKEQEQEGEKEKSEVETTEKIYVK
CSRHRNKKRVWDKKYHCLFCPKKGAKLVGHWQRRHRSEPDVAQLVSLSYK
KSDSLETRKYKKKARRRIIDKLRRIGNYRHNMKVLTELRGELIVKKRPIK
ATSFKQFLPSEFCLEFYYRRDLRRHMENCPCRSDRRVEGRVQSKAVLLLP
VRKEVSNDLNKIISKMRGDEVGNKVKMDPTIIKYGNMLCRKHLNNDDQEY
HISNKLRELGRFLVAMQRNPELRQNDLQGMIRPQNFPTVIESIHQLCGWN
EEQRTVETPSLGIKLGQLLNKVCYLLKGEAIIEGNSALKQDADDFATLVS
MKWNDEIAKVSRIAKKWNKPQLLPLTEDLKKLKNHLLDIRQESFDALARD
NSDTKAWRNLATATLTAIILLNRRRSGEAAKLKTANFEEALKNQKGTTSK
STKSTTVFRNLPYKLQSVAKS

Run BLAST on NCBI

transcript from alignment at sc0002292:12071..22012-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00040056 ID=TCONS_00040056|Name=TCONS_00040056|organism=Clytia hemisphaerica|type=transcript|length=9942bp|location=Sequence derived from alignment at sc0002292:12071..22012- (Clytia hemisphaerica)
TTCCGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAAAAGAAAGAGAAG
AAAATCCAGAAGTACGTGAAAATGAAGAAGAAAAAGAACAAGAACAAGAA
GGAGAAAAAGAAAAATCTGAAGTTGAAACAACTGAAAAGATCTACGTGAA
GTGCTCTCGCCACAGGAATAAGAAAAGGGTTTGGGACAAGAAGTATCATT
GCCTGTTTTGCCCGAAGAAGGGAGCAAAACTTGTTGGACACTGGCAGAGA
AGGCACCGGTCAGAGCCTGACGTTGCCCAACTGGTTTCCCTAAGCTATAA
AAAAAGTGACAGTCTGGAAACACGAAAGTATAAAAAGAAAGCAAGGCGCC
GCATTATTGACAAACTGCGACGAATAGGGAATTACAGGCACAACATGAAG
GTTCTCACAGAATTGAGGGGGGAACTGATCGTGAAGAAACGCCCGATCAA
AGCGACCAGCTTTAAACAATTCCTTCCTTCCGAATTTTGCTTGGAGTTTT
ACTACCGCCGTGATCTCCGTCGACACATGGAAAACTGTCCTTGCCGAAGT
GACAGGAGAGTTGAGGGACGTGTCCAGAGCAAGGCAGTCCTTCTGCTACC
AGTGAGAAAGGAAGTTTCAAATGACTTGAACAAGATCATTTCTAAAATGA
GGGGAGACGAGGTGGGAAACAAAGTTAAGATGGATCCAACAATAATTAAA
TATGGTAACATGCTTTGCCGCAAGCACCTCAACAATGATGATCAAGAATA
TCATATTAGCAACAAACTACGCGAACTGGGAAGATTCCTCGTCGCAATGC
AAAGAAACCCAGAATTGCGCCAAAATGATCTGCAGGGAATGATTCGACCT
CAAAACTTTCCAACCGTTATCGAAAGCATTCATCAATTGTGTGGCTGGAA
TGAAGAACAGAGAACGGTTGAAACACCTTCATTAGGTAAGAAAAGTGATT
TTCAAATATTATCAAAATGCATTTTTTATATTTATCAATTTATTTTCAGT
TGGTAAAAAAAGGATGTGACCTAATGTCCTCGATAAATACACATGGTGTC
CACTTTGTCAGGAATGTCAGGAAAGTCAGGAAATGTCAGGAAATTCAAAA
AAATGGGGAAATTGTCAGGAAAATGTCAGTAAATAATAGGATTTTCCTGA
AATGTCAGGAAAAGTCAGGATTTTTGATCGATTTCTAGAAAAATGGCTTG
TAAAAGTCCACAACAGTGTCAAATTCCAAAAATTTCGTGCTCGCTTCGCT
CGCATTATATTTTTCTCAAGTACAAGGGACAGTAACAACTTAGAAAAATG
TCAGCAAATTTAGCTCAAAATTGTTAGGAAAATGAAAGGAAAAGCATAGT
TAAACTTTGAGTGGACACCCTGATACAGTAAAGCTTTAACCGTTACTAAT
AAAATCAAACTTTTACCAAAATAGTCATAAAAATCTACCACAATTTACAT
ATTGGGCAGGTACAAAAATCGTTTGGCAACACTTTTAACTTTCCCAAAAA
AAACCAGGCACTTTTACAGTACAAGAATTTTTTGAAAATATTTAACTTGA
TATGAAAAGATGCAGATTTAGATAAAGCTAATAATTGATATAAATTTTGT
TTCTGAATTTCGATATCTATATCTTAATAGCAGTGTTTTGTAAGTCTTTC
TGTTTGTCACTTTCGTTTTCGATTTCAAACTTTTTGGCAAGAAGTCATTG
CAGTGTTAATCTTTCGCAAAAAATTTAACTTAATTTCCTGTGTAGTAGAG
GTTTTAATGGTCGAATTGTTTAAATTGAGAACAGTCGGTCAAACTTTGCA
AAAAATGTCCCCCAGCATTAGTAGATTCGATTTAGAGGTGGTGTCAAAAA
TGTTGTGCCTCTAATGATGCCTTAGCAACGGTTTTTGCAGTTTCTAAGCT
AAAATTCTAACCTACAAAAAAGTCAAACTCCAAAACCATTTACTCTCGGG
TACCTAATAGCCGGGGGGTTTGGAATAAGCAAGGGGTTGGAAAAAATCTC
AAAATTTAATATGCGGGGGGGGGGTTGGAATTAAAATGTCCTGGGTGGAA
AATGTTCGAAAAGGAGGCTGATACAGCAGAATTAGGGCAAAAGAGGGAAT
TTTCAAAAACATTTTTCCCCAAAATCAATAAGCGGGGGGGGGGTTGGAAT
AAGAATGTCCTGGGTGGAAAATTTTCGAAAAATTAATTTGCGGGGCAAAG
TTAGCAGCTGATTGACCTCTAAAAAGCATCTTTTTTGCTCTTTTTTGGGG
TCAATTAGAAGCAAACTTTGTGTAATATCTTTTTATCGAATGAATATTTT
TGAATTTTTTTTTCTCAGTGAATACACACTAGGATATAAGTTTCAAAATG
ATAATCATAACTTAATTTTGCAAGAAGTTTTTTTTTCATGTTAATCATCT
TTTTATCACAAATTATTCCACTCATTAATATCTTTCCGACGTTACCAAAT
TTAAAAGGAATGAAGCAATTCTTGAAAAAGTTACAGGGAAAACAAAAAAA
GAGTGGACACTTATCGTGAACAGACTTTAAACTTCACTACTTTTTTTGGT
GTCATAAATCATTGATTTTCTCAGGTTTGGCAGGGTTTGGTTGTGAAATC
AACCATGTCGATCAAAAGTCCTCTATATCATTTTCCGAGAGCATTCGAAT
GATATAACATGATACAGGGCTCTTCCTGAGAATTGAGAAAATTGGCAGCT
CTGTGACATCAAAATGTTGAGATAAATAAAAGTTGCAACTGCTCCGAATT
TCAATCTACTCTAAGCGGTAGAGTACTCTGTGCAAAAAAATCACTAAGTT
TTCACAAAATAACCAATTTTTTTCGTAACATTAAGTAATTTGACGAAAAC
TAAATTGACAAGCTATGTTTAATGATTTTATACCTTCCTATTTCTCTCCT
ATAGGAATCAAATTGGGGCAACTTCTAAACAAAGTTTGCTACCTCCTCAA
AGGCGAGGCTATCATTGAAGGAAATTCGGCTTTAAAGCAAGACGCGGACG
ATTTTGCAACTCTCGTTTCAATGAAATGGAATGATGAAATAGCGAAAGTT
TCACGTATTGCAAAGAAATGGAATAAGCCACAGCTGCTGCCTTTAACCGA
GGATTTAAAGAAGCTGAAAAATCACCTCCTCGACATCCGCCAGGAGTCGT
TTGATGCGCTGGCCCGCGACAACTCGGATACAAAAGCTTGGCGAAACCTG
GCCACTGCAACCCTGACAGCTATCATTCTACTTAACAGAAGACGAAGTGG
GGAAGCTGCAAAACTTAAAACTGCCAATTTCGAGGAAGCACTAAAAAATC
AAAAAGTAAAAGTTCATCCAGATATAGAAAAATCCCTATCTCCTTTTGAA
CTCGAGTTGTGCAAGATATTTAAGCGTCTGGAAATCCGAGGAAAATTTGG
TCGAAAGGTTCCAGTCCTCCTAAGCAAAAAGTTAGCCGAATCAATGGATA
TTTTAGCTAATACTCGAAAATCAGTTGGAATATTTGAGGATAACAGATAC
TTTTTTGCTGTACCCCACTCACTACATTATCTCCGTGGCAGCGATTCTAT
ACGCAAGCATGTTAGATTGTGTGAATTATCTTGCCCCGTGGCGATTACGT
CAACAAAGTTGCGAAAGCATGTTGCGACTCTAAGTCAAGTCTTGAATCTT
CAAGAAAGCGAGGTCGAAATGCTTGCGTCATTTCTAGGGCACGACGTCAA
AATCCACAAAGAGTACTACCGTCTTCAGGAATCTACCCTACAAGTTGCAA
AGTGTGGCAAAATCTTAATGTTGTTGGAGCAGGGAAAGATGGCGGATTTC
GCAGGAAAATCATTGAGTGAAATTGATTTGGATATCAATGGTAGGTGAAT
TAATGTTTATAAACGTCCAAAAATTTAAATTCAAATTTTACGAGGAATCA
ATGGGCTCTGACCATAGTGAGTTTTCGTAATTTGGCATGCACTAAATGCT
AATTTGTGCATATTATATAGACCGTTAAAGTATATGATGTTATGCATTTT
CTGTTAGACCAATCATTTGTGAATCCAGGTGAATCTAAAAATATAGAAAT
CGCAAGGAAAAAGTTTCATGAAAAAGAAATGGAAGACTTTGGCGAAGAAT
AGTATTTTAAGAAAAATGTTGGCTTAAATGTCTACTAAGGAACTAAAAAT
AGATTTTCGAAAAATATTTGTTATCGCTTCTTTGTTTCAAAATCTTCAGA
AGAGTGCTTTTTGAAAAATTTTCAATAGTGCATTTTTCTGTGAAAAAAAA
TCCAATTAAAAAAGTATGAAGGGTACGCATTTTTTGTAAAAAGTATATGA
TTAACTTCGTACCACACTTATATATCAGTTAAACTTAATATTTCTAAAGC
AGTTTGTTCCTACACATGTCAAAAATTTTTCAATTTCACATAAGGTTTTT
TATTCAAATTAGAAAATTGATTCTTCACTATGATGATCAGAGCCCTTAAG
GAAAAAACTTATTTCGTGTGCATCTCATTTGATTTTTTCAATTTTAAATG
GCAATTTTTCACAGTATTGTTAGGCTTCGGAAACTGATTCTAAAAATTTA
TCTCAAAGCTGGTGAAATTTGTTTAATTGCTGTAACATTTATCTCGATTG
ATACTACTGTTTGCCATGGTATATCCTTCCGTTGAAAGATTTACCCAAAG
AAATTGGTTAATGACTTTTTTTCTTCTAGAAATTCACTCTGACTTGGAGG
ATGGTGACGACGACGATGAGGTCGAGAGCGATAGTGAGGACGAGGAGAAC
GAAGAGGAAGAGGAAGAGGAAGAGAAAGAGAAAGAGAAAGAAAAAGACGA
AAACCTACCAAAATCTATAAAAGGTAACCATTAAGATTTCCATAACATAA
AAAAAATAGGCAAAATACGGTTCAAGCAGACTTTTGCAAAAAAAATTGTT
GTTGGCTCAAAAAACGCATGTTTATCTATAAGAATCACTATTAATAAGCA
TACATCAATGTTCTTAGTCAAATTACTCAATTTTTTTATGAGATAGNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNTTGGGCCGAACGTATGGTCGTTTTCAGA
TCGAGTGCCCCCCCGGGTTTCTGAACCTTCTACAGAAGTAGTCGAATGCC
AAATTGTCTTTATTTTGCAAACCAGCCAGATTTATTTACATCGTATTAGA
TCGTGGATTGAAGTATCTGTTTAGTCTCTAATTCTCAATATTTGCTGCTA
TGTATTTCTTTCTATTTTTCTGACGATTGTTGATATAAAATTCAGCAGGA
CATCATTCAACTTTGTCTGACATAACTTTAATATCATAACTGATATAACA
TAAATTTCAATCAATGTGCTTTTCTTCTTTCCTTTGAGTGTATTTTTGGC
ATTGTGATTAATCTTCTACTCTTTTATTTCTCCTTCAGTGGCACTGCCAA
ATTTTGCACAGCATTCATTTTATTTTTATTTTAAATTTTTCTGGAAAATT
GTTTTGAAAGTCGAAGTGTTTTCAAAGTGTTTTGTAGTAGTAATAATTAA
TGAAAGTTTCCATTTCATCCATTTCAGTTGCAAAGAAAAAGAAGGCTATC
TCCAAGAAAAAAGAATCAAAGAAAACACCAGTCAAAGGTAATCCTTTAGA
CTTTTGAGTGTGACAAAGATATGTAGGTAAAATAAAGCTCGTCGATTAAA
TGTCGATTCATTCAAAGCTGTTACAGTATTAAGATTCTAGAGTTCCCATT
CAAATATTTGCATGTTTTTTCGTATTTCTTTCAAATTTGGCATTTTATGC
TAGGTTTTTGGAATGTTTAAGCATTTTTTTAGAGAAATATCAGAGAATTT
TGGTTATAATTGTTCTTTTGTCTTAATGCGTAGATGTTCATTAGAAAAAT
AGTCTGAAATCGCAGTCACTCGAAGTGGACTCTTCCAGAAAAAATTGTTG
TTGAGGGTATAGGATACATTATTTTTCCAAAGTTGGAACTTTTCGTTTTT
TTGCCCCTGGGCAATCATCAAATTACACCAAAATTTATCCCAATATTATA
GCAAATTTACATTGTGATTTCTCAGGACTTTTTCGGTACCCCTGGGCAAT
TCATCCTCCACCCCCTATGAACGGATTTTTATCTGGAAGAGCTTTTTATT
TATCCAGAGTTCAGACAGACCCTAGAAACTATTGAAAAAAGCAAGTTATC
TGAAAAGGAGACTCGTGGTTTTTTCTTTGATTTTTTCTTGCTTACGTGAA
TAAAGCTCTAGTGTTTGTATACATAAAATAATGTTCATCATTTCCTTTTA
AAGAAATGTTTCATAGGCTACCTGAATGCCAAACTTTGCCATTTTAGAAG
GAATTGAAATTTGTACGGTTTTCCTGATTCTTAGGTTTACTATCCAACTT
ATTTTCTTTTGAATTTTCCTCCAGATGAAGCACCATAGAGCAAGGTGTGA
AAGGCTTTTCATTCATGAATCCCGCCTTGAGTGAGCACGTTTTAATCTAA
AAATAATGTTGACAACATTTTTACCTTTAAATTTCAATTTTTATGAAAAA
TGCTAGCTAAAATTTCTGCTGATTTTTATAATTTTAAGGCAATTTTGCAA
AAGGAGGGTCCCGAGTGGCTTTGGCAAAATCGGGTGCTGAATATGTATGT
ACGGGTACCTTTTTCAGACCTTGAAAATCGATCCAAGAGTAAAAAAAAGC
CAATAAACTTAAAGGGTCTCAAAATCACAAAAATCAAAATATTTTCACCG
AAAGGATCAGAATTATTGAAAATTCCGGAAGAATCTCTTTATAGCGTCTC
AAAGCGTCAAAAATTCTTATCTCCAAGGGTCGATTTTCAATTTTTGGTTC
GAACATACCCAGACACTTCGCAATTTGCTAGCAAGTTCTCTTATAAAATT
CTTTTTGTGTTGACACATTATTGACAATGAAGGTTTTCTGGCTAATTGGG
TCTTTTCAGTAATTTCAATAATTTTTTATCTTGATCACGAAATTTTGTAG
AAAGAATCTATCATAAACCTAAATTTGTCTCGCCTTATTCAAGTGGTAGC
CAGTTTTTAAATATCTTCCATTTGAAGCTTAAAGTGAGTGTCTCGAAATT
GGCAACATTAGGAGTTCAATTGTTCCAGTGCTGACCAGTTTTTAAATATC
CTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGG
AGTTCAATTGTTCCAGTGCTGACCAGTTTTTTAATATCCTCGGTTTAAAG
GTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTTATTAGGAGTTTGAT
TGTTCATCCAGTGCTGAACAGTTTTTGAATATCCTCGGTTTGAAGGTTGA
AGCCAGTGTGTTAAATTGGTCAATATTATTAGGAGTTTGATTGTTCATCC
AGTGCTGACCAGTTTTTAAATATCCTCGGTTTGAAGGTTAAATTGAGCGT
GTTAAATTGGTCAATATTATTTATTAGGAGTTTGATTGTTCATCCAGTGC
TGAACAGTTTTTGAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAA
ATTGGTCAATATTATTAGGAGTTCAATTGTTCCAGTGCTGACCAGTTTTT
GAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGATAAATTGGTCAATAT
TATTAGGAGTTCGATTGTTCATCCAGTGCTGGCCAGTTTTTAAATATCCT
CGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAG
TTCAATACACTCTTCTCGAGATGCATAAGTTTATTGTTGTCCTCGTTTTC
AAACAGATTTCATTGCTATAAAATTACATATTCACAATGATAATTGTGTT
GTTTACACCTCATGAGACATTTTGNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTT
CAATTGTTCCAGTGCTGACCAGTTTTTAAATATCCTCGGTTTGAAGGTTG
AAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCGATTGTTCCAG
TGCTGTCCAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGT
TAAATTGGTCAATATTATTAGGAGTTCGATTGTTCCATTGCTGTCCAGTT
TTTAAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAA
TATTATTAGGAGTTCGATTGTTCCAGTGCTGTCCAGTTTTTAAATATCCT
CGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAG
TTCGATTGTTCCATTGCTGTCCAGTTTTTAAATATCCTCGGTTTGAAGGT
TGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCGATTGTTCC
AGTGCTGTCCAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAGCGAGTGT
GTTAAATTGGTCAATATTATTAGGAGTTCAATTGTTCCAGTACTGACCAG
GTTTTAAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTC
AATATTATTAGGAGTTCAATTGTTCCAGTACTGACCAGGTTTTAAATATC
CTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGG
AGTTCAATTGTTCCAGTACTGACCAGGTTTTAGATATCCTCGGTTTGAAG
GTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCAATTTGT
TTCAGTGCTGACCAGTTTTTAAATATCCTCGGTTTGAAGGTTAAAGCGTG
TTAAATTGGTCAATATTATTATTGTTATTATTATTTAATCGCACGGATGC
AGTCCCGGCACGCCAAATATTAAATATATACTACACAATTTTTGCACGAA
GGCAGTCTCGGCACCCCAAATACACGTTTTTTTTTAAGAAACTAGTTTTA
CCAAGCAGCCTCAATGTTTCTTAAGAAATCGGCCTTTTGAGCCTTAAATG
TCTCTTACGTGTTTCTAAACTTTTTGACATAATCAGCCATAGTCAGTTTT
GATTGGAAGGTTCTTAAAAAAAAACGAATTAAAAAATGTTATTTTCTCAT
TCTCAGCCTCGGCATGTCCCTTAGATGTTTCCTAGTTTTTAGGCATTCTG
AGCCTCATGTTTCTTAAAAGTGTGTTTCTTAAAAAAAAAAAACGTGTATT
AGATATGTTAAATAAAATAACTTTTGTCAAAAATCTAGAAGGAACACAAA
AGTTCAGAATCACTGGAACTATATGAGAGCGAAGAAGAAAGACTATCTTT
GCTCTATGGAGTTCTGCTGCCGCGGAGGCACAGGAGAACTGAACTCAAGA
GGGCAAAGTTAATTTTTCTTCTTACCCAAGTTGTCGTGATGGCAAGGGAC
TCGTTTCGTTTTTCAGGCATGAAACGCCGATTTATGGAATTTTAATTTTA
AATAACCTTTGCCTAAAATGATCTTGAAATTACACTTGTATTTCTATTTT
TTATAGCTCGCAGGCAGTGGTCAAAGGAGCAACAAAGTGTGATGAATGAA
GATTTTGACTCCTGCTTTAAAGCACTCAAACCCCCTGGGAAAAAAGAATG
CGACGATGTTATGGAGAAACACTTTCCGTTGTTCGCCTCAAGAGAGTGGC
TTGATTTGAAATACTATGTTCATAATAAGATTAAGAACCCTGCGAAAAAG
GCAAAGACACTGGCACAAAGGGCGGCAAGAAATGTTACAANN

Coding sequence (CDS) from alignment at sc0002292:12071..22012-

>TCONS_00040056 ID=TCONS_00040056|Name=TCONS_00040056|organism=Clytia hemisphaerica|type=CDS|length=4248bp|location=Sequence derived from alignment at sc0002292:12071..22012- (Clytia hemisphaerica)
GGCACGACGTCAAAATCCACAAAGAGTACTACCGTCTTCAGGAATCTACC
CTACAAGTTGCAAAGTGTGGCAAAATCTTAAGAATCAAATTGGGGCAACT
TCTAAACAAAGTTTGCTACCTCCTCAAAGGCGAGGCTATCATTGAAGGAA
ATTCGGCTTTAAAGCAAGACGCGGACGATTTTGCAACTCTCGTTTCAATG
AAATGGAATGATGAAATAGCGAAAGTTTCACGTATTGCAAAGAAATGGAA
TAAGCCACAGCTGCTGCCTTTAACCGAGGATTTAAAGAAGCTGAAAAATC
ACCTCCTCGACATCCGCCAGGAGTCGTTTGATGCGCTGGCCCGCGACAAC
TCGGATACAAAAGCTTGGCGAAACCTGGCCACTGCAACCCTGACAGCTAT
CATTCTACTTAACAGAAGACGAAGTGGGGAAGCTGCAAAACTTAAAACTG
CCAATTTCGAGGAAGCACTAAAAAATCAAAAATCCGAAGAAGAAGAAGAC
GAAGAAGAAGAAGAAGAAAAAGAAAGAGAAGAAAATCCAGAAGTACGTGA
AAATGAAGAAGAAAAAGAACAAGAACAAGAAGGAGAAAAAGAAAAATCTG
AAGTTGAAACAACTGAAAAGATCTACGTGAAGTGCTCTCGCCACAGGAAT
AAGAAAAGGGTTTGGGACAAGAAGTATCATTGCCTGTTTTGCCCGAAGAA
GGGAGCAAAACTTGTTGGACACTGGCAGAGAAGGCACCGGTCAGAGCCTG
ACGTTGCCCAACTGGTTTCCCTAAGCTATAAAAAAAGTGACAGTCTGGAA
ACACGAAAGTATAAAAAGAAAGCAAGGCGCCGCATTATTGACAAACTGCG
ACGAATAGGGAATTACAGGCACAACATGAAGGTTCTCACAGAATTGAGGG
GGGAACTGATCGTGAAGAAACGCCCGATCAAAGCGACCAGCTTTAAACAA
TTCCTTCCTTCCGAATTTTGCTTGGAGTTTTACTACCGCCGTGATCTCCG
TCGACACATGGAAAACTGTCCTTGCCGAAGTGACAGGAGAGTTGAGGGAC
GTGTCCAGAGCAAGGCAGTCCTTCTGCTACCAGTGAGAAAGGAAGTTTCA
AATGACTTGAACAAGATCATTTCTAAAATGAGGGGAGACGAGGTGGGAAA
CAAAGTTAAGATGGATCCAACAATAATTAAATATGGTAACATGCTTTGCC
GCAAGCACCTCAACAATGATGATCAAGAATATCATATTAGCAACAAACTA
CGCGAACTGGGAAGATTCCTCGTCGCAATGCAAAGAAACCCAGAATTGCG
CCAAAATGATCTGCAGGGAATGATTCGACCTCAAAACTTTCCAACCGTTA
TCGAAAGCATTCATCAATTGTGTGGCTGGAATGAAGAACAGAGAACGGTT
GAAACACCTTCATTAGGGCACGACGTCAAAATCCACAAAGAGTACTACCG
TCTTCAGGAATCTACCCTACAAGTTGCAAAGTGTGGCAAAATCTTAAGAA
TCAAATTGGGGCAACTTCTAAACAAAGTTTGCTACCTCCTCAAAGGCGAG
GCTATCATTGAAGGAAATTCGGCTTTAAAGCAAGACGCGGACGATTTTGC
AACTCTCGTTTCAATGAAATGGAATGATGAAATAGCGAAAGTTTCACGTA
TTGCAAAGAAATGGAATAAGCCACAGCTGCTGCCTTTAACCGAGGATTTA
AAGAAGCTGAAAAATCACCTCCTCGACATCCGCCAGGAGTCGTTTGATGC
GCTGGCCCGCGACAACTCGGATACAAAAGCTTGGCGAAACCTGGCCACTG
CAACCCTGACAGCTATCATTCTACTTAACAGAAGACGAAGTGGGGAAGCT
GCAAAACTTAAAACTGCCAATTTCGAGGAAGCACTAAAAAATCAAAAATC
CGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAAAAAGAAAGAGAAGAAA
ATCCAGAAGTACGTGAAAATGAAGAAGAAAAAGAACAAGAACAAGAAGGA
GAAAAAGAAAAATCTGAAGTTGAAACAACTGAAAAGATCTACGTGAAGTG
CTCTCGCCACAGGAATAAGAAAAGGGTTTGGGACAAGAAGTATCATTGCC
TGTTTTGCCCGAAGAAGGGAGCAAAACTTGTTGGACACTGGCAGAGAAGG
CACCGGTCAGAGCCTGACGTTGCCCAACTGGTTTCCCTAAGCTATAAAAA
AAGTGACAGTCTGGAAACACGAAAGTATAAAAAGAAAGCAAGGCGCCGCA
TTATTGACAAACTGCGACGAATAGGGAATTACAGGCACAACATGAAGGTT
CTCACAGAATTGAGGGGGGAACTGATCGTGAAGAAACGCCCGATCAAAGC
GACCAGCTTTAAACAATTCCTTCCTTCCGAATTTTGCTTGGAGTTTTACT
ACCGCCGTGATCTCCGTCGACACATGGAAAACTGTCCTTGCCGAAGTGAC
AGGAGAGTTGAGGGACGTGTCCAGAGCAAGGCAGTCCTTCTGCTACCAGT
GAGAAAGGAAGTTTCAAATGACTTGAACAAGATCATTTCTAAAATGAGGG
GAGACGAGGTGGGAAACAAAGTTAAGATGGATCCAACAATAATTAAATAT
GGTAACATGCTTTGCCGCAAGCACCTCAACAATGATGATCAAGAATATCA
TATTAGCAACAAACTACGCGAACTGGGAAGATTCCTCGTCGCAATGCAAA
GAAACCCAGAATTGCGCCAAAATGATCTGCAGGGAATGATTCGACCTCAA
AACTTTCCAACCGTTATCGAAAGCATTCATCAATTGTGTGGCTGGAATGA
AGAACAGAGAACGGTTGAAACACCTTCATTAGGGCACGACGTCAAAATCC
ACAAAGAGTACTACCGTCTTCAGGAATCTACCCTACAAGTTGCAAAGTGT
GGCAAAATCTTAAGAATCAAATTGGGGCAACTTCTAAACAAAGTTTGCTA
CCTCCTCAAAGGCGAGGCTATCATTGAAGGAAATTCGGCTTTAAAGCAAG
ACGCGGACGATTTTGCAACTCTCGTTTCAATGAAATGGAATGATGAAATA
GCGAAAGTTTCACGTATTGCAAAGAAATGGAATAAGCCACAGCTGCTGCC
TTTAACCGAGGATTTAAAGAAGCTGAAAAATCACCTCCTCGACATCCGCC
AGGAGTCGTTTGATGCGCTGGCCCGCGACAACTCGGATACAAAAGCTTGG
CGAAACCTGGCCACTGCAACCCTGACAGCTATCATTCTACTTAACAGAAG
ACGAAGTGGGGAAGCTGCAAAACTTAAAACTGCCAATTTCGAGGAAGCAC
TAAAAAATCAAAAATCCGAAGAAGAAGAAGACGAAGAAGAAGAAGAAGAA
AAAGAAAGAGAAGAAAATCCAGAAGTACGTGAAAATGAAGAAGAAAAAGA
ACAAGAACAAGAAGGAGAAAAAGAAAAATCTGAAGTTGAAACAACTGAAA
AGATCTACGTGAAGTGCTCTCGCCACAGGAATAAGAAAAGGGTTTGGGAC
AAGAAGTATCATTGCCTGTTTTGCCCGAAGAAGGGAGCAAAACTTGTTGG
ACACTGGCAGAGAAGGCACCGGTCAGAGCCTGACGTTGCCCAACTGGTTT
CCCTAAGCTATAAAAAAAGTGACAGTCTGGAAACACGAAAGTATAAAAAG
AAAGCAAGGCGCCGCATTATTGACAAACTGCGACGAATAGGGAATTACAG
GCACAACATGAAGGTTCTCACAGAATTGAGGGGGGAACTGATCGTGAAGA
AACGCCCGATCAAAGCGACCAGCTTTAAACAATTCCTTCCTTCCGAATTT
TGCTTGGAGTTTTACTACCGCCGTGATCTCCGTCGACACATGGAAAACTG
TCCTTGCCGAAGTGACAGGAGAGTTGAGGGACGTGTCCAGAGCAAGGCAG
TCCTTCTGCTACCAGTGAGAAAGGAAGTTTCAAATGACTTGAACAAGATC
ATTTCTAAAATGAGGGGAGACGAGGTGGGAAACAAAGTTAAGATGGATCC
AACAATAATTAAATATGGTAACATGCTTTGCCGCAAGCACCTCAACAATG
ATGATCAAGAATATCATATTAGCAACAAACTACGCGAACTGGGAAGATTC
CTCGTCGCAATGCAAAGAAACCCAGAATTGCGCCAAAATGATCTGCAGGG
AATGATTCGACCTCAAAACTTTCCAACCGTTATCGAAAGCATTCATCAAT
TGTGTGGCTGGAATGAAGAACAGAGAACGGTTGAAACACCTTCATTAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_024276	XLOC_024276	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00040056-protein	TCONS_00040056-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0002292	supercontig	sc0002292:12071..22012 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.198096	0	0	0	0	0.0115595	0	0.38053	0	0	0	0.515931	1.3095e-06	0.162526	0	0	0	2.58463e-08	0.00039037	0.128659	0	0	0.669578	0	0.0314777	0	9.06825e-10	0.284504	0.0455911	0.0298754

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00040056 vs. Swiss-Prot (Human)

BLAST of TCONS_00040056 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00040056 (transcript) - C. hemisphaerica