XLOC_024276 (gene) - C. hemisphaerica

Overview
NameXLOC_024276
Unique NameXLOC_024276
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002292:12071..22093-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024276 ID=XLOC_024276|Name=XLOC_024276|organism=Clytia hemisphaerica|type=gene|length=10023bp|location=Sequence derived from alignment at sc0002292:12071..22093- (Clytia hemisphaerica)
AAAATTCCAACAAAGATATTTCAAGATTAGAAAAACATTTCTGGTTTGGT
ACTTGTAGTATGTTTAATTTATATATTCAGGTTCCGAAGAAGAAGAAGAC
GAAGAAGAAGAAGAAGAAAAAGAAAGAGAAGAAAATCCAGAAGTACGTGA
AAATGAAGAAGAAAAAGAACAAGAACAAGAAGGAGAAAAAGAAAAATCTG
AAGTTGAAACAACTGAAAAGATCTACGTGAAGTGCTCTCGCCACAGGAAT
AAGAAAAGGGTTTGGGACAAGAAGTATCATTGCCTGTTTTGCCCGAAGAA
GGGAGCAAAACTTGTTGGACACTGGCAGAGAAGGCACCGGTCAGAGCCTG
ACGTTGCCCAACTGGTTTCCCTAAGCTATAAAAAAAGTGACAGTCTGGAA
ACACGAAAGTATAAAAAGAAAGCAAGGCGCCGCATTATTGACAAACTGCG
ACGAATAGGGAATTACAGGCACAACATGAAGGTTCTCACAGAATTGAGGG
GGGAACTGATCGTGAAGAAACGCCCGATCAAAGCGACCAGCTTTAAACAA
TTCCTTCCTTCCGAATTTTGCTTGGAGTTTTACTACCGCCGTGATCTCCG
TCGACACATGGAAAACTGTCCTTGCCGAAGTGACAGGAGAGTTGAGGGAC
GTGTCCAGAGCAAGGCAGTCCTTCTGCTACCAGTGAGAAAGGAAGTTTCA
AATGACTTGAACAAGATCATTTCTAAAATGAGGGGAGACGAGGTGGGAAA
CAAAGTTAAGATGGATCCAACAATAATTAAATATGGTAACATGCTTTGCC
GCAAGCACCTCAACAATGATGATCAAGAATATCATATTAGCAACAAACTA
CGCGAACTGGGAAGATTCCTCGTCGCAATGCAAAGAAACCCAGAATTGCG
CCAAAATGATCTGCAGGGAATGATTCGACCTCAAAACTTTCCAACCGTTA
TCGAAAGCATTCATCAATTGTGTGGCTGGAATGAAGAACAGAGAACGGTT
GAAACACCTTCATTAGGTAAGAAAAGTGATTTTCAAATATTATCAAAATG
CATTTTTTATATTTATCAATTTATTTTCAGTTGGTAAAAAAAGGATGTGA
CCTAATGTCCTCGATAAATACACATGGTGTCCACTTTGTCAGGAATGTCA
GGAAAGTCAGGAAATGTCAGGAAATTCAAAAAAATGGGGAAATTGTCAGG
AAAATGTCAGTAAATAATAGGATTTTCCTGAAATGTCAGGAAAAGTCAGG
ATTTTTGATCGATTTCTAGAAAAATGGCTTGTAAAAGTCCACAACAGTGT
CAAATTCCAAAAATTTCGTGCTCGCTTCGCTCGCATTATATTTTTCTCAA
GTACAAGGGACAGTAACAACTTAGAAAAATGTCAGCAAATTTAGCTCAAA
ATTGTTAGGAAAATGAAAGGAAAAGCATAGTTAAACTTTGAGTGGACACC
CTGATACAGTAAAGCTTTAACCGTTACTAATAAAATCAAACTTTTACCAA
AATAGTCATAAAAATCTACCACAATTTACATATTGGGCAGGTACAAAAAT
CGTTTGGCAACACTTTTAACTTTCCCAAAAAAAACCAGGCACTTTTACAG
TACAAGAATTTTTTGAAAATATTTAACTTGATATGAAAAGATGCAGATTT
AGATAAAGCTAATAATTGATATAAATTTTGTTTCTGAATTTCGATATCTA
TATCTTAATAGCAGTGTTTTGTAAGTCTTTCTGTTTGTCACTTTCGTTTT
CGATTTCAAACTTTTTGGCAAGAAGTCATTGCAGTGTTAATCTTTCGCAA
AAAATTTAACTTAATTTCCTGTGTAGTAGAGGTTTTAATGGTCGAATTGT
TTAAATTGAGAACAGTCGGTCAAACTTTGCAAAAAATGTCCCCCAGCATT
AGTAGATTCGATTTAGAGGTGGTGTCAAAAATGTTGTGCCTCTAATGATG
CCTTAGCAACGGTTTTTGCAGTTTCTAAGCTAAAATTCTAACCTACAAAA
AAGTCAAACTCCAAAACCATTTACTCTCGGGTACCTAATAGCCGGGGGGT
TTGGAATAAGCAAGGGGTTGGAAAAAATCTCAAAATTTAATATGCGGGGG
GGGGGTTGGAATTAAAATGTCCTGGGTGGAAAATGTTCGAAAAGGAGGCT
GATACAGCAGAATTAGGGCAAAAGAGGGAATTTTCAAAAACATTTTTCCC
CAAAATCAATAAGCGGGGGGGGGGTTGGAATAAGAATGTCCTGGGTGGAA
AATTTTCGAAAAATTAATTTGCGGGGCAAAGTTAGCAGCTGATTGACCTC
TAAAAAGCATCTTTTTTGCTCTTTTTTGGGGTCAATTAGAAGCAAACTTT
GTGTAATATCTTTTTATCGAATGAATATTTTTGAATTTTTTTTTCTCAGT
GAATACACACTAGGATATAAGTTTCAAAATGATAATCATAACTTAATTTT
GCAAGAAGTTTTTTTTTCATGTTAATCATCTTTTTATCACAAATTATTCC
ACTCATTAATATCTTTCCGACGTTACCAAATTTAAAAGGAATGAAGCAAT
TCTTGAAAAAGTTACAGGGAAAACAAAAAAAGAGTGGACACTTATCGTGA
ACAGACTTTAAACTTCACTACTTTTTTTGGTGTCATAAATCATTGATTTT
CTCAGGTTTGGCAGGGTTTGGTTGTGAAATCAACCATGTCGATCAAAAGT
CCTCTATATCATTTTCCGAGAGCATTCGAATGATATAACATGATACAGGG
CTCTTCCTGAGAATTGAGAAAATTGGCAGCTCTGTGACATCAAAATGTTG
AGATAAATAAAAGTTGCAACTGCTCCGAATTTCAATCTACTCTAAGCGGT
AGAGTACTCTGTGCAAAAAAATCACTAAGTTTTCACAAAATAACCAATTT
TTTTCGTAACATTAAGTAATTTGACGAAAACTAAATTGACAAGCTATGTT
TAATGATTTTATACCTTCCTATTTCTCTCCTATAGGAATCAAATTGGGGC
AACTTCTAAACAAAGTTTGCTACCTCCTCAAAGGCGAGGCTATCATTGAA
GGAAATTCGGCTTTAAAGCAAGACGCGGACGATTTTGCAACTCTCGTTTC
AATGAAATGGAATGATGAAATAGCGAAAGTTTCACGTATTGCAAAGAAAT
GGAATAAGCCACAGCTGCTGCCTTTAACCGAGGATTTAAAGAAGCTGAAA
AATCACCTCCTCGACATCCGCCAGGAGTCGTTTGATGCGCTGGCCCGCGA
CAACTCGGATACAAAAGCTTGGCGAAACCTGGCCACTGCAACCCTGACAG
CTATCATTCTACTTAACAGAAGACGAAGTGGGGAAGCTGCAAAACTTAAA
ACTGCCAATTTCGAGGAAGCACTAAAAAATCAAAAAGTAAAAGTTCATCC
AGATATAGAAAAATCCCTATCTCCTTTTGAACTCGAGTTGTGCAAGATAT
TTAAGCGTCTGGAAATCCGAGGAAAATTTGGTCGAAAGGTTCCAGTCCTC
CTAAGCAAAAAGTTAGCCGAATCAATGGATATTTTAGCTAATACTCGAAA
ATCAGTTGGAATATTTGAGGATAACAGATACTTTTTTGCTGTACCCCACT
CACTACATTATCTCCGTGGCAGCGATTCTATACGCAAGCATGTTAGATTG
TGTGAATTATCTTGCCCCGTGGCGATTACGTCAACAAAGTTGCGAAAGCA
TGTTGCGACTCTAAGTCAAGTCTTGAATCTTCAAGAAAGCGAGGTCGAAA
TGCTTGCGTCATTTCTAGGGCACGACGTCAAAATCCACAAAGAGTACTAC
CGTCTTCAGGAATCTACCCTACAAGTTGCAAAGTGTGGCAAAATCTTAAT
GTTGTTGGAGCAGGGAAAGATGGCGGATTTCGCAGGAAAATCATTGAGTG
AAATTGATTTGGATATCAATGGTAGGTGAATTAATGTTTATAAACGTCCA
AAAATTTAAATTCAAATTTTACGAGGAATCAATGGGCTCTGACCATAGTG
AGTTTTCGTAATTTGGCATGCACTAAATGCTAATTTGTGCATATTATATA
GACCGTTAAAGTATATGATGTTATGCATTTTCTGTTAGACCAATCATTTG
TGAATCCAGGTGAATCTAAAAATATAGAAATCGCAAGGAAAAAGTTTCAT
GAAAAAGAAATGGAAGACTTTGGCGAAGAATAGTATTTTAAGAAAAATGT
TGGCTTAAATGTCTACTAAGGAACTAAAAATAGATTTTCGAAAAATATTT
GTTATCGCTTCTTTGTTTCAAAATCTTCAGAAGAGTGCTTTTTGAAAAAT
TTTCAATAGTGCATTTTTCTGTGAAAAAAAATCCAATTAAAAAAGTATGA
AGGGTACGCATTTTTTGTAAAAAGTATATGATTAACTTCGTACCACACTT
ATATATCAGTTAAACTTAATATTTCTAAAGCAGTTTGTTCCTACACATGT
CAAAAATTTTTCAATTTCACATAAGGTTTTTTATTCAAATTAGAAAATTG
ATTCTTCACTATGATGATCAGAGCCCTTAAGGAAAAAACTTATTTCGTGT
GCATCTCATTTGATTTTTTCAATTTTAAATGGCAATTTTTCACAGTATTG
TTAGGCTTCGGAAACTGATTCTAAAAATTTATCTCAAAGCTGGTGAAATT
TGTTTAATTGCTGTAACATTTATCTCGATTGATACTACTGTTTGCCATGG
TATATCCTTCCGTTGAAAGATTTACCCAAAGAAATTGGTTAATGACTTTT
TTTCTTCTAGAAATTCACTCTGACTTGGAGGATGGTGACGACGACGATGA
GGTCGAGAGCGATAGTGAGGACGAGGAGAACGAAGAGGAAGAGGAAGAGG
AAGAGAAAGAGAAAGAGAAAGAAAAAGACGAAAACCTACCAAAATCTATA
AAAGGTAACCATTAAGATTTCCATAACATAAAAAAAATAGGCAAAATACG
GTTCAAGCAGACTTTTGCAAAAAAAATTGTTGTTGGCTCAAAAAACGCAT
GTTTATCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTC
AAATTACTCAATTTTTTTATGAGATAGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTGGGCCGAACGTATGGTCGTTTTCAGATCGAGTGCCCCCCCGGGTT
TCTGAACCTTCTACAGAAGTAGTCGAATGCCAAATTGTCTTTATTTTGCA
AACCAGCCAGATTTATTTACATCGTATTAGATCGTGGATTGAAGTATCTG
TTTAGTCTCTAATTCTCAATATTTGCTGCTATGTATTTCTTTCTATTTTT
CTGACGATTGTTGATATAAAATTCAGCAGGACATCATTCAACTTTGTCTG
ACATAACTTTAATATCATAACTGATATAACATAAATTTCAATCAATGTGC
TTTTCTTCTTTCCTTTGAGTGTATTTTTGGCATTGTGATTAATCTTCTAC
TCTTTTATTTCTCCTTCAGTGGCACTGCCAAATTTTGCACAGCATTCATT
TTATTTTTATTTTAAATTTTTCTGGAAAATTGTTTTGAAAGTCGAAGTGT
TTTCAAAGTGTTTTGTAGTAGTAATAATTAATGAAAGTTTCCATTTCATC
CATTTCAGTTGCAAAGAAAAAGAAGGCTATCTCCAAGAAAAAAGAATCAA
AGAAAACACCAGTCAAAGGTAATCCTTTAGACTTTTGAGTGTGACAAAGA
TATGTAGGTAAAATAAAGCTCGTCGATTAAATGTCGATTCATTCAAAGCT
GTTACAGTATTAAGATTCTAGAGTTCCCATTCAAATATTTGCATGTTTTT
TCGTATTTCTTTCAAATTTGGCATTTTATGCTAGGTTTTTGGAATGTTTA
AGCATTTTTTTAGAGAAATATCAGAGAATTTTGGTTATAATTGTTCTTTT
GTCTTAATGCGTAGATGTTCATTAGAAAAATAGTCTGAAATCGCAGTCAC
TCGAAGTGGACTCTTCCAGAAAAAATTGTTGTTGAGGGTATAGGATACAT
TATTTTTCCAAAGTTGGAACTTTTCGTTTTTTTGCCCCTGGGCAATCATC
AAATTACACCAAAATTTATCCCAATATTATAGCAAATTTACATTGTGATT
TCTCAGGACTTTTTCGGTACCCCTGGGCAATTCATCCTCCACCCCCTATG
AACGGATTTTTATCTGGAAGAGCTTTTTATTTATCCAGAGTTCAGACAGA
CCCTAGAAACTATTGAAAAAAGCAAGTTATCTGAAAAGGAGACTCGTGGT
TTTTTCTTTGATTTTTTCTTGCTTACGTGAATAAAGCTCTAGTGTTTGTA
TACATAAAATAATGTTCATCATTTCCTTTTAAAGAAATGTTTCATAGGCT
ACCTGAATGCCAAACTTTGCCATTTTAGAAGGAATTGAAATTTGTACGGT
TTTCCTGATTCTTAGGTTTACTATCCAACTTATTTTCTTTTGAATTTTCC
TCCAGATGAAGCACCATAGAGCAAGGTGTGAAAGGCTTTTCATTCATGAA
TCCCGCCTTGAGTGAGCACGTTTTAATCTAAAAATAATGTTGACAACATT
TTTACCTTTAAATTTCAATTTTTATGAAAAATGCTAGCTAAAATTTCTGC
TGATTTTTATAATTTTAAGGCAATTTTGCAAAAGGAGGGTCCCGAGTGGC
TTTGGCAAAATCGGGTGCTGAATATGTATGTACGGGTACCTTTTTCAGAC
CTTGAAAATCGATCCAAGAGTAAAAAAAAGCCAATAAACTTAAAGGGTCT
CAAAATCACAAAAATCAAAATATTTTCACCGAAAGGATCAGAATTATTGA
AAATTCCGGAAGAATCTCTTTATAGCGTCTCAAAGCGTCAAAAATTCTTA
TCTCCAAGGGTCGATTTTCAATTTTTGGTTCGAACATACCCAGACACTTC
GCAATTTGCTAGCAAGTTCTCTTATAAAATTCTTTTTGTGTTGACACATT
ATTGACAATGAAGGTTTTCTGGCTAATTGGGTCTTTTCAGTAATTTCAAT
AATTTTTTATCTTGATCACGAAATTTTGTAGAAAGAATCTATCATAAACC
TAAATTTGTCTCGCCTTATTCAAGTGGTAGCCAGTTTTTAAATATCTTCC
ATTTGAAGCTTAAAGTGAGTGTCTCGAAATTGGCAACATTAGGAGTTCAA
TTGTTCCAGTGCTGACCAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAG
CGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCAATTGTTCCAGTGC
TGACCAGTTTTTTAATATCCTCGGTTTAAAGGTTGAAGCGAGTGTGTTAA
ATTGGTCAATATTATTTATTAGGAGTTTGATTGTTCATCCAGTGCTGAAC
AGTTTTTGAATATCCTCGGTTTGAAGGTTGAAGCCAGTGTGTTAAATTGG
TCAATATTATTAGGAGTTTGATTGTTCATCCAGTGCTGACCAGTTTTTAA
ATATCCTCGGTTTGAAGGTTAAATTGAGCGTGTTAAATTGGTCAATATTA
TTTATTAGGAGTTTGATTGTTCATCCAGTGCTGAACAGTTTTTGAATATC
CTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGG
AGTTCAATTGTTCCAGTGCTGACCAGTTTTTGAATATCCTCGGTTTGAAG
GTTGAAGCGAGTGTGATAAATTGGTCAATATTATTAGGAGTTCGATTGTT
CATCCAGTGCTGGCCAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAGCG
AGTGTGTTAAATTGGTCAATATTATTAGGAGTTCAATACACTCTTCTCGA
GATGCATAAGTTTATTGTTGTCCTCGTTTTCAAACAGATTTCATTGCTAT
AAAATTACATATTCACAATGATAATTGTGTTGTTTACACCTCATGAGACA
TTTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCAATTGTTCCAGTGCTGAC
CAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTG
GTCAATATTATTAGGAGTTCGATTGTTCCAGTGCTGTCCAGTTTTTAAAT
ATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATT
AGGAGTTCGATTGTTCCATTGCTGTCCAGTTTTTAAATATCCTCGGTTTG
AAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCGATT
GTTCCAGTGCTGTCCAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAGCG
AGTGTGTTAAATTGGTCAATATTATTAGGAGTTCGATTGTTCCATTGCTG
TCCAGTTTTTAAATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAAT
TGGTCAATATTATTAGGAGTTCGATTGTTCCAGTGCTGTCCAGTTTTTAA
ATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTA
TTAGGAGTTCAATTGTTCCAGTACTGACCAGGTTTTAAATATCCTCGGTT
TGAAGGTTGAAGCGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCAA
TTGTTCCAGTACTGACCAGGTTTTAAATATCCTCGGTTTGAAGGTTGAAG
CGAGTGTGTTAAATTGGTCAATATTATTAGGAGTTCAATTGTTCCAGTAC
TGACCAGGTTTTAGATATCCTCGGTTTGAAGGTTGAAGCGAGTGTGTTAA
ATTGGTCAATATTATTAGGAGTTCAATTTGTTTCAGTGCTGACCAGTTTT
TAAATATCCTCGGTTTGAAGGTTAAAGCGTGTTAAATTGGTCAATATTAT
TATTGTTATTATTATTTAATCGCACGGATGCAGTCCCGGCACGCCAAATA
TTAAATATATACTACACAATTTTTGCACGAAGGCAGTCTCGGCACCCCAA
ATACACGTTTTTTTTTAAGAAACTAGTTTTACCAAGCAGCCTCAATGTTT
CTTAAGAAATCGGCCTTTTGAGCCTTAAATGTCTCTTACGTGTTTCTAAA
CTTTTTGACATAATCAGCCATAGTCAGTTTTGATTGGAAGGTTCTTAAAA
AAAAACGAATTAAAAAATGTTATTTTCTCATTCTCAGCCTCGGCATGTCC
CTTAGATGTTTCCTAGTTTTTAGGCATTCTGAGCCTCATGTTTCTTAAAA
GTGTGTTTCTTAAAAAAAAAAAACGTGTATTAGATATGTTAAATAAAATA
ACTTTTGTCAAAAATCTAGAAGGAACACAAAAGTTCAGAATCACTGGAAC
TATATGAGAGCGAAGAAGAAAGACTATCTTTGCTCTATGGAGTTCTGCTG
CCGCGGAGGCACAGGAGAACTGAACTCAAGAGGGCAAAGTTAATTTTTCT
TCTTACCCAAGTTGTCGTGATGGCAAGGGACTCGTTTCGTTTTTCAGGCA
TGAAACGCCGATTTATGGAATTTTAATTTTAAATAACCTTTGCCTAAAAT
GATCTTGAAATTACACTTGTATTTCTATTTTTTATAGCTCGCAGGCAGTG
GTCAAAGGAGCAACAAAGTGTGATGAATGAAGATTTTGACTCCTGCTTTA
AAGCACTCAAACCCCCTGGGAAAAAAGAATGCGACGATGTTATGGAGAAA
CACTTTCCGTTGTTCGCCTCAAGAGAGTGGCTTGATTTGAAATACTATGT
TCATAATAAGATTAAGAACCCTGCGAAAAAGGCAAAGACACTGGCACAAA
GGGCGGCAAGAAATGTTACAANN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040057TCONS_00040057Clytia hemisphaericatranscript
TCONS_00040056TCONS_00040056Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040056-proteinTCONS_00040056-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002292supercontigsc0002292:12071..22093 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.36	1.2	0.59	0.47	4.32	3.43	1.8	2.31	1.23	1.75	1.73	1.69	1.69	1.91	2.53	3.2	2.49	2.95	0.97	1.26	2.12	1.77	1.91	1.52	1.02	1.7	1	0.85	1.24	0.72