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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00040002 ID=TCONS_00040002|Name=TCONS_00040002|organism=Clytia hemisphaerica|type=transcript|length=6192bp
ccaaaaccggcgtaaaacagatatccttcattttttcgagttatacttga
cagattttcatgattttttgcacaatgatgcaaaatggcaatgccaaAGA
TGTagcggagcccgattttcgaaaaaaaaattatttccggtCGCTAGGGC
CGGAAATGTCTCGCAAAAGGCGGTTTTTTGGgatttctcgagattttctc
gttagttttttctgattttttgtgcATAGACGCGtgttagtactgccgaa
aagatGTTCAAAACTGTTTtccgaaacaaaaaaatttccggcctgtagaa
ccggaaatgtgaaATGTgccagaaatcgccgtttttacGTATTTCCGTGa
cactttttcaacttatttgatcGTTTCTTTACATAAATAGGTTCCAAGTT
AGAGAGAAtggcaatttttcaaaacattgactttttttaatttgacacac
ttatttcataagaaaaagaaaatcaaaaagtaaacaaaagtgtgctctaa
aaaattttctcttcTTAAAATGACCCCCTGATTGAAAGAGAGATTTTCTT
AAATGTGTTTATAAAGTGACGTCAGAATAATAAATGAGAATATAGGCAAT
TTTACTAGACTACTAATTTTCCTCTTTCAGTTTTCATCTAACTAGTTAAT
TTTGCATTAAGTATCATTATTAAATTAGTAGTCTAGATCTAGACTTGCCG
GATGCAAGAGACTTTTTTCTCTTATATATTCCCGCGCTTTTTAGCGAGAC
aagttttcattcatttttttctttctactaTTGTCGTGCTTCACCGTAga
gttcttttatttttttctttctcttttgtaTTTATAGAAAGGTAAATGTA
TACGCACCACGATGAAGATAAAGTCTAggaatattttgtttgtttggtgA
AATGTAGATGTATTATAGGATAATATGTAGTCTCATGAAATGATATCTTG
TGTGTTGAAGAGTGAGACAGCGGAAGGGAAGTTTgattattgtaaaaaaa
aatcgttatgttgtttcatttaaaatatggaggtataaagaaataCTTTT
ATACCTCCATGAACATTTCAATGTATACGCTTCTTTTCTTTAGTTTTAGA
GTAAAAAAACagtattaaaaacattaaaaaaagaaagcatttgtatttga
tcaaaaatcaaagtcaaaaatcaTTGGAGAATTGATCATCACTTGGATCC
TTGGACAACACTTGCGTTAGAAGCAGTTTCATTTTCCAGCTGGTGACTTA
CTCAACAAGTTTTACGATAATCAAGAATTGAAGCaacaaaagagaagaaa
gaagaaaagaagaaaattattttactaGGAAAACTTTGTTAGatttagtg
aaaaaaaaaaagaataaaaaaaagtaagaaaaagaggcataaaaaagaaa
taaaaaataaaaaaaatataaaaacaaaaacaaaaataaaagaattgaaa
agaaaagaaaagaaatgccCATCAAAAGAGCTGACACCAGCCAAAGTCCA
CGAAGGCACCGCCAAGGTAGTAAGGGATACTCTCTTTTACTTCCTTGGTT
GGACTATAAAAGCCACTGCGGAGGTCAAACAAGGCACGACCCTTATAAAC
GCCACTCAAACTTACAAACTTACAATGCAAATAATAAACCTTTATCTTAT
ATTTACGATACAAGTTTTTTATTAATCACTCAAGGTATCATAGATGGAGA
TGTAGAATCTAATCCGGGGCCGAATCAAAGCACGTATAACTCAACGATAG
GTAGACCAAAAGggcaaacaaagaaaaagggtTTCCGTGGAACTCCAAAA
AAAGCAAATGGTAAAGAAAATGTTGCAGAGCAAAAAGTAATAGGTTTAAA
AAATATCGGGCAAAATGTctgcttttttaattcaatcgTTCAATCATTAT
ACACTATAGATAGTTTCTGTGAATCTGTTAAATCTCTGGATACTAATAAC
CCAAGTCTATTAGCaataaaagaattattttcaacGATAGAAAGGTCTGA
AACTCCGATAGAAACATATCAATTCATAAAATCGATAGAACTACCTGGCT
ACGACTATATACGGCGAGAACAATTTGATGCACAAGAATGTATGATGCAT
ATTTTGAATCATGTATATAATCTTAATCCTGATGGATCTGTTCCTACAGA
AAGTTTATTTCGTCTGTCCTTTTTAGAATCGGTTTTATGTCAAAATTGTA
ACAATGCTtctgaaaaaactgtttttgatAATATGTGTCAGATTCGATTT
TCTGATCCAAATAACCCTGAGAATTCGGTAAAAGATTCAATTGAAAAACT
AACCAATGATCCTTATGGTAACTTTCTTCAAGACACGTATGAATGTGCAA
ATTGCCCGATTAAAACAAATGCCACACAAAATATAACGTTATTGAATGTT
TCTGATTCTTTGATCATTCAACTTGTCATTTTTAGCTTTAATCAGACCAC
TGGAGCTCCTCTGAAATTATCTCCAAACTTAGCAATCgagacaaaaattg
aaaatgtcctATTGGGAACATTTGAGTTAACGGCAATCATTTATCACCAT
GGCCATACAGCTAATAGTGGACATTATACTGCTGTTGTGAAACACGGCGA
GCAATGGTATTCAGTTGATGATGATCGTGTTTTACCTATTGAGGCTGATG
TTTTCAATTGTTCGGTTAAGGATCATATGGTTCCGTATATTCTACTTTAC
AGGAAATTTAATAGGGAAATAGATCTCATGCCAGTAAATGCAAATAATCA
ACTAGATAACCCAGACCACATTAAAGATGGCATTAATGTTTCGACAGGAT
GTTCAAAATCTCCCATAcctactgaaaaaaaaaatttcattgaccaaaga
taagaaaaatgaatctGGTGTAGAAGAGTTTGTATCGTTTGATAAACAAA
ACTCAGAACAAATGATGAAGAGAGCACTTCTTAAGGAAATAAAAATTCAA
GAGCACAAAATAACACAATCAAGAAAGAAGCTAGTGTCTGATAAAGAAAA
TTCCACTCCCATTAAAAGAAAGCGAAGAATCactacaaagtccaaaaaat
tttcaatgaaaaaggcAAGATATAATCTTAATGACATCAAAAAAGAGCTC
TTTCGGGAAACTGATAAAGAAAGGAAACAAGAATACAGAGAAAATCAAGA
CGatatggaaaaagaaaaagatcgaGAAACTGCCTCTAAAAGAATGAAAT
ATTTGCGACAAAatcaagatgctatggaaaaagaaaaagacctaGAAACT
GCCtctaaaagaatgaaaaatttgcGACAAAATCTAGACCctatggaaaa
agaaaaagttttaaaatctgACAAAttaaggaagaaaaaattaagagaac
atcaagatgccatggaaaaagaaaaagatcgaGAAACTGCCtctaaaaga
atgaaaaatttgcGACAAAATCAAGATGATTTGGAAAGAGAAAATACTCG
TGTTCAAGATAAATTAAGGAAGAAAAATTATCGACTTCTAAACAAAATTG
AAAGAGATAGAGAGTTTCACAAAGTTCAAAGTAAAAGTATGGCTGATCCA
TCANATTATcgacttttaaacaaaattgaaaGAGATAGAGAGTTTCACAA
AGTTCAAAGCAAAAGTATGGCTGATCCATCGATTACACTAAGTAAAGCAT
TTGAAATCGTTAAACAAGACTTTGATTATGTTATAAGTGAAGGCCCAACA
AATAAATGTCATATTTGCATAAAATGGGAGTATAAAGgaaacaccaaaag
atttctccacaaagaatatgaaaaattgGCCATGTTTCAATTGTGTGATG
TACCTAATACTGATTGCGATTCTGAAGAAATTTACTGGATTTGCCATCCA
TGTGATAAAGCTATAAAAAAGGAGCAACTGCCTGTACAAGCACAAGCCAA
TAATCTTCAGTTATCACCAAAACTTCCAGAATTAGAGGAATTATGCCCAA
TTGAAATGATGCTAGTTTCCCAAATAATTCCATTTATGTTCATTGTACCA
AAGCATAAAGGAGGACAGCAAGGTTTAAAAGGACAGTGTGTTATGGTACC
AGCAAATCTTGACAAAATTCAAAAGGTCTTACCAAGAGTTTGTAGTGACG
AATTTTTGATTTCACTTGCTCTAAAACGACGTCTTTCTGATAAAAGTTCA
GTCAACAAACAAAACATACGACCTGCTTTCGTAACAAAAGCATTACAAAG
ATTAGTTGAAGTcaataaattttatgaaaatattgcACCAAATTATAGAT
GGGAAGATGAAAGTTTACGATCAGACCCCGAATTATGGTCACTTTTAACT
GATCAGAATGCTCAACCTCAGGAAGATGAAAGCGATAGTGACGATAACAT
TGAAGGCAATGATAATAATCTTGAAAGGCAGATGAAAATTAATAACTCCT
CTCAGCCTACTTTATTGTATGATATTGATGGTGCAGCAATTTCTTCAGAA
AAAGCTATTGATATTACTCTTCAACAATCTACTACTGACATATCATCTGA
TCAAGTTGTTAATATTGCCCCctgtgaaaatgaaataccaGTATCATTTT
ATTCAGAACCTGATTGGGAGGCTTTAGCATTTCCAGCTCACTATCCTGat
gctaaaaattattttaattcaCCGAGAGATAAGAATATAACTCCATCAAA
ATATATTCATGCACGATTAAAATCCTCAGACGATCGATTTGCTTCAGATC
CACAATATATTTTTAGTTCTTTGCATTGGATTGAAAGCTCGAATGTTGCT
AGTGCAATTAGTTTTTcgcaacaaaaaaattttcaaagtgatATATCAGC
AGGTAGATTAATGAATCCTGATAACGTTAGGCAAATGATTTCGgatgatc
aaatttttcaaaactctttcAAAAGTATACGAGGAACTCCACAGTGGTGC
CATAATATGATGTTAGATGTTTTAGCAAAATGTAGAGTTTTCGGACCTAG
CACATATTTTCTTACATGGACAGCAGCGTTATTCAAATGGACTAATATTA
TCAAAGTAGTCGCAACACAATACGGAGAAAATCTAACTGATGAAGATGTA
AACAATATGGATTGGAGCCAAAAAGTTCAATATTTTAAAAGGAACCCTGT
GACAGTAGCCAGGCAAATTGATCATATTTTCAATAAGGTTTTTCCGAAAA
TGCTCATGAACGGCATGCATCCAATAGGACAAATTTTGAATTATGATGAT
CGCAGAGAATTTCAACATCGATCAGGATTAGAACATGTCCACGCTCAAGT
ACATATCAAAGATGCCCCTATAATTGACGAAAAAGACAGTAGTAAAGACA
ATCAAGTTGTTGATTTTATCGATAATTACATTACATGCTCATTACCAGAT
AAAAACGAATATCCGAAGCTTTACGAATTGGTGAATACTGTACAAAAACA
TCATCATACAACAACCTGTAGAAAGAAAAGCGGATCAAGATGTAGATTCA
AAGCCCCCTGGCCACCATGTGAAGAAACTCGCATTATTCGAGGTAAACAA
ATCGATAAAAACGATTACAGAGCAAGTAAAAAAATCTTAGATAAAGTTCT
TGATGAAATAAATAATTGTAGTAGTGATCTGCAAGATATTAGTCTTGATG
ATTTGTTGCGATCATGTGATATTTCAAGAGATGAATATTTCACTGCTTTA
GACATGGTTCAAAAGAAGATAACAGTACTTTACAAAAGAACGCCAAATGA
AACTAATATCGGCCCATACAATACTGTAATGATTAGTATTTTACAATCAA
ACATGAATATTCAATACGTTACAAATATGTATGCGGTGCTAGCATATATA
ACTTCTTACATGTGCAAGCCAGAAAGAAATATGAGTGAACTTATGAAAAA
GGCACACAAAGAGGCATCCGGAAAAGACGTAAAAGATAAGTTACGTGCTA
TTGGCAATGTTTTTTTAACTAAACGCAAAGTATCAACTCATGAAGCTATC
AAGCGAacactttctttaaaaatgaaaacttctAATATCAATGTAGAATT
CGTTATAACAGGTCCCAAAGAAAAACGTACGCGAATCCTGAAAAGTCCAT
CTGAACTAGCAAAACTTGATCCagattccaaaaatgtttacaaaaacaGT
ATGTTCGACAAGTATCAGAATCGTCCTAACAAATTAAAAGATATGTGCTT
AGCAGACTTTGCTTCTATTTATACGTACCCAAAGAAAAAANN Run BLAST on NCBI protein sequence of TCONS_00040002-protein >TCONS_00040002-protein ID=TCONS_00040002-protein|Name=TCONS_00040002-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1138bp
MALMFRQDVQNLPYLLKKKISLTKDKKNESGVEEFVSFDKQNSEQMMKRA
LLKEIKIQEHKITQSRKKLVSDKENSTPIKRKRRITTKSKKFSMKKARYN
LNDIKKELFRETDKERKQEYRENQDDMEKEKDRETASKRMKYLRQNQDAM
EKEKDLETASKRMKNLRQNLDPMEKEKVLKSDKLRKKKLREHQDAMEKEK
DRETASKRMKNLRQNQDDLERENTRVQDKLRKKNYRLLNKIERDREFHKV
QSKSMADPSXYRLLNKIERDREFHKVQSKSMADPSITLSKAFEIVKQDFD
YVISEGPTNKCHICIKWEYKGNTKRFLHKEYEKLAMFQLCDVPNTDCDSE
EIYWICHPCDKAIKKEQLPVQAQANNLQLSPKLPELEELCPIEMMLVSQI
IPFMFIVPKHKGGQQGLKGQCVMVPANLDKIQKVLPRVCSDEFLISLALK
RRLSDKSSVNKQNIRPAFVTKALQRLVEVNKFYENIAPNYRWEDESLRSD
PELWSLLTDQNAQPQEDESDSDDNIEGNDNNLERQMKINNSSQPTLLYDI
DGAAISSEKAIDITLQQSTTDISSDQVVNIAPCENEIPVSFYSEPDWEAL
AFPAHYPDAKNYFNSPRDKNITPSKYIHARLKSSDDRFASDPQYIFSSLH
WIESSNVASAISFSQQKNFQSDISAGRLMNPDNVRQMISDDQIFQNSFKS
IRGTPQWCHNMMLDVLAKCRVFGPSTYFLTWTAALFKWTNIIKVVATQYG
ENLTDEDVNNMDWSQKVQYFKRNPVTVARQIDHIFNKVFPKMLMNGMHPI
GQILNYDDRREFQHRSGLEHVHAQVHIKDAPIIDEKDSSKDNQVVDFIDN
YITCSLPDKNEYPKLYELVNTVQKHHHTTTCRKKSGSRCRFKAPWPPCEE
TRIIRGKQIDKNDYRASKKILDKVLDEINNCSSDLQDISLDDLLRSCDIS
RDEYFTALDMVQKKITVLYKRTPNETNIGPYNTVMISILQSNMNIQYVTN
MYAVLAYITSYMCKPERNMSELMKKAHKEASGKDVKDKLRAIGNVFLTKR
KVSTHEAIKRTLSLKMKTSNINVEFVITGPKEKRTRILKSPSELAKLDPD
SKNVYKNSMFDKYQNRPNKLKDMCLADFASIYTYPKKK Run BLAST on NCBI transcript from alignment at sc0002265:3755..10074- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00040002 ID=TCONS_00040002|Name=TCONS_00040002|organism=Clytia hemisphaerica|type=transcript|length=6320bp|location=Sequence derived from alignment at sc0002265:3755..10074- (Clytia hemisphaerica)
CCAAAACCGGCGTAAAACAGATATCCTTCATTTTTTCGAGTTATACTTGA
CAGATTTTCATGATTTTTTGCACAATGATGCAAAATGGCAATGCCAAAGA
TGTAGCGGAGCCCGATTTTCGAAAAAAAAATTATTTCCGGTCGCTAGGGC
CGGAAATGTCTCGCAAAAGGCGGTTTTTTGGGATTTCTCGAGATTTTCTC
GTTAGTTTTTTCTGATTTTTTGTGCATAGACGCGTGTTAGTACTGCCGAA
AAGATGTTCAAAACTGTTTTCCGAAACAAAAAAATTTCCGGCCTGTAGAA
CCGGAAATGTGAAATGTGCCAGAAATCGCCGTTTTTACGTATTTCCGTGA
CACTTTTTCAACTTATTTGATCGTTTCTTTACATAAATAGGTTCCAAGTT
AGAGAGAATGGCAATTTTTCAAAACATTGACTTTTTTTAATTTGACACAC
TTATTTCATAAGAAAAAGAAAATCAAAAAGTAAACAAAAGTGTGCTCTAA
AAAATTTTCTCTTCTTAAAATGACCCCCTGATTGAAAGAGAGATTTTCTT
AAATGTGTTTATAAAGTGACGTCAGAATAATAAATGAGAATATAGGCAAT
TTTACTAGACTACTAATTTTCCTCTTTCAGTTTTCATCTAACTAGTTAAT
TTTGCATTAAGTATCATTATTAAATTAGTAGTCTAGATCTAGACTTGCCG
GATGCAAGAGACTTTTTTCTCTTATATATTCCCGCGCTTTTTAGCGAGAC
AAGTTTTCATTCATTTTTTTCTTTCTACTATTGTCGTGCTTCACCGTAGA
GTTCTTTTATTTTTTTCTTTCTCTTTTGTATTTATAGAAAGGTAAATGTA
TACGCACCACGATGAAGATAAAGTCTAGGAATATTTTGTTTGTTTGGTGA
AATGTAGATGTATTATAGGATAATATGTAGTCTCATGAAATGATATCTTG
TGTGTTGAAGAGTGAGACAGCGGAAGGGAAGTTTGATTATTGTAAAAAAA
AATCGTTATGTTGTTTCATTTAAAATATGGAGGTATAAAGAAATACTTTT
ATACCTCCATGAACATTTCAATGTATACGCTTCTTTTCTTTAGTTTTAGA
GTAAAAAAACAGTATTAAAAACATTAAAAAAAGAAAGCATTTGTATTTGA
TCAAAAATCAAAGTCAAAAATCATTGGAGAATTGATCATCACTTGGATCC
TTGGACAACACTTGCGTTAGAAGCAGTTTCATTTTCCAGCTGGTGACTTA
CTCAACAAGTTTTACGATAATCAAGAATTGAAGCAACAAAAGAGAAGAAA
GAAGAAAAGAAGAAAATTATTTTACTAGGAAAACTTTGTTAGATTTAGTG
AAAAAAAAAAAGAATAAAAAAAAGTAAGAAAAAGAGGCATAAAAAAGAAA
TAAAAAATAAAAAAAATATAAAAACAAAAACAAAAATAAAAGAATTGAAA
AGAAAAGAAAAGAAATGCCCATCAAAAGAGCTGACACCAGCCAAAGTCCA
CGAAGGCACCGCCAAGGTAGTAAGGGATACTCTCTTTTACTTCCTTGGTT
GGACTATAAAAGCCACTGCGGAGGTCAAACAAGGCACGACCCTTATAAAC
GCCACTCAAACTTACAAACTTACAATGCAAATAATAAACCTTTATCTTAT
ATTTACGATACAAGTTTTTTATTAATCACTCAAGGTATCATAGATGGAGA
TGTAGAATCTAATCCGGGGCCGAATCAAAGCACGTATAACTCAACGATAG
GTAGACCAAAAGGGCAAACAAAGAAAAAGGGTTTCCGTGGAACTCCAAAA
AAAGCAAATGGTAAAGAAAATGTTGCAGAGCAAAAAGTAATAGGTTTAAA
AAATATCGGGCAAAATGTCTGCTTTTTTAATTCAATCGTTCAATCATTAT
ACACTATAGATAGTTTCTGTGAATCTGTTAAATCTCTGGATACTAATAAC
CCAAGTCTATTAGCAATAAAAGAATTATTTTCAACGATAGAAAGGTCTGA
AACTCCGATAGAAACATATCAATTCATAAAATCGATAGAACTACCTGGCT
ACGACTATATACGGCGAGAACAATTTGATGCACAAGAATGTATGATGCAT
ATTTTGAATCATGTATATAATCTTAATCCTGATGGATCTGTTCCTACAGA
AAGTTTATTTCGTCTGTCCTTTTTAGAATCGGTTTTATGTCAAAATTGTA
ACAATGCTTCTGAAAAAACTGTTTTTGATAATATGTGTCAGATTCGATTT
TCTGATCCAAATAACCCTGAGAATTCGGTAAAAGATTCAATTGAAAAACT
AACCAATGATCCTTATGGTAACTTTCTTCAAGACACGTATGAATGTGCAA
ATTGCCCGATTAAAACAAATGCCACACAAAATATAACGTTATTGAATGTT
TCTGATTCTTTGATCATTCAACTTGTCATTTTTAGCTTTAATCAGACCAC
TGGAGCTCCTCTGAAATTATCTCCAAACTTAGCAATCGAGACAAAAATTG
AAAATGTCCTATTGGGAACATTTGAGTTAACGGCAATCATTTATCACCAT
GGCAATACAGCTAATANCTATTGGGAACATTTGAGTTAACGGCAATCATT
TATCACCATGGCCATACAGCTAATAGTGGACATTATACTGCTGTTGTGAA
ACACGGCGAGCAATGGTATTCAGTTGATGATGATCGTGTTTTACCTATTG
AGGCTGATGTTTTCAATTGTTCGGTTAAGGATCATATGGTTCCGTATATT
CTACTTTACAGGAAATTTAATAGGGAAATAGATCTCATGCCAGTAAATGC
AAATAATCAACTAGATAACCCAGACCACATTAAAGATGGCATTAATGTTT
CGACAGGATGTTCAAAATCTCCCATACCTACTGAAAAAAAAAATTTCATT
GACCAAAGATAAGAAAAATGAATCTGGTGTAGAAGAGTTTGTATCGTTTG
ATAAACAAAACTCAGAACAAATGATGAAGAGAGCACTTCTTAAGGAAATA
AAAATTCAAGAGCACAAAATAACACAATCAAGAAAGAAGCTAGTGTCTGA
TAAAGAAAATTCCACTCCCATTAAAAGAAAGCGAAGAATCACTACAAAGT
CCAAAAAATTTTCAATGAAAAAGGCAAGATATAATCTTAATGACATCAAA
AAAGAGCTCTTTCGGGAAACTGATAAAGAAAGGAAACAAGAATACAGAGA
AAATCAAGACGATATGGAAAAAGAAAAAGATCGAGAAACTGCCTCTAAAA
GAATGAAATATTTGCGACAAAATCAAGACCCTATGGAAAAAGAAAAAGTT
TTAAAATCTGACAAATTAAGGAAGAAAAAATTCAGAGAACATCAAGATGC
TATGGAAAAAGAAAAAGACCTAGAAACTGCCTCTAAAAGAATGAAAAATT
TGCGACAAAATCTAGACCCTATGGAAAAAGAAAAAGTTTTAAAATCTGAC
AAATTAAGGAAGAAAAAATTAAGAGAACATCAAGATGCCATGGAAAAAGA
AAAAGATCGAGAAACTGCCTCTAAAAGAATGAAAAATTTGCGACAAAATC
AAGATGATTTGGAAAGAGAAAATACTCGTGTTCAAGATAAATTAAGGAAG
AAAAATTATCGACTTCTAAACAAAATTGAAAGAGATAGAGAGTTTCACAA
AGTTCAAAGTAAAAGTATGGCTGATCCATCANATTATCGACTTTTAAACA
AAATTGAAAGAGATAGAGAGTTTCACAAAGTTCAAAGCAAAAGTATGGCT
GATCCATCGATTACACTAAGTAAAGCATTTGAAATCGTTAAACAAGACTT
TGATTATGTTATAAGTGAAGGCCCAACAAATAAATGTCATATTTGCATAA
AATGGGAGTATAAAGGAAACACCAAAAGATTTCTCCACAAAGAATATGAA
AAATTGGCCATGTTTCAATTGTGTGATGTACCTAATACTGATTGCGATTC
TGAAGAAATTTACTGGATTTGCCATCCATGTGATAAAGCTATAAAAAAGG
AGCAACTGCCTGTACAAGCACAAGCCAATAATCTTCAGTTATCACCAAAA
CTTCCAGAATTAGAGGAATTATGCCCAATTGAAATGATGCTAGTTTCCCA
AATAATTCCATTTATGTTCATTGTACCAAAGCATAAAGGAGGACAGCAAG
GTTTAAAAGGACAGTGTGTTATGGTACCAGCAAATCTTGACAAAATTCAA
AAGGTCTTACCAAGAGTTTGTAGTGACGAATTTTTGATTTCACTTGCTCT
AAAACGACGTCTTTCTGATAAAAGTTCAGTCAACAAACAAAACATACGAC
CTGCTTTCGTAACAAAAGCATTACAAAGATTAGTTGAAGTCAATAAATTT
TATGAAAATATTGCACCAAATTATAGATGGGAAGATGAAAGTTTACGATC
AGACCCCGAATTATGGTCACTTTTAACTGATCAGAATGCTCAACCTCAGG
AAGATGAAAGCGATAGTGACGATAACATTGAAGGCAATGATAATAATCTT
GAAAGGCAGATGAAAATTAATAACTCCTCTCAGCCTACTTTATTGTATGA
TATTGATGGTGCAGCAATTTCTTCAGAAAAAGCTATTGATATTACTCTTC
AACAATCTACTACTGACATATCATCTGATCAAGTTGTTAATATTGCCCCC
TGTGAAAATGAAATACCAGTATCATTTTATTCAGAACCTGATTGGGAGGC
TTTAGCATTTCCAGCTCACTATCCTGATGCTAAAAATTATTTTAATTCAC
CGAGAGATAAGAATATAACTCCATCAAAATATATTCATGCACGATTAAAA
TCCTCAGACGATCGATTTGCTTCAGATCCACAATATATTTTTAGTTCTTT
GCATTGGATTGAAAGCTCGAATGTTGCTAGTGCAATTAGTTTTTCGCAAC
AAAAAAATTTTCAAAGTGATATATCAGCAGGTAGATTAATGAATCCTGAT
AACGTTAGGCAAATGATTTCGGATGATCAAATTTTTCAAAACTCTTTCAA
AAGTATACGAGGAACTCCACAGTGGTGCCATAATATGATGTTAGATGTTT
TAGCAAAATGTAGAGTTTTCGGACCTAGCACATATTTTCTTACATGGACA
GCAGCGTTATTCAAATGGACTAATATTATCAAAGTAGTCGCAACACAATA
CGGAGAAAATCTAACTGATGAAGATGTAAACAATATGGATTGGAGCCAAA
AAGTTCAATATTTTAAAAGGAACCCTGTGACAGTAGCCAGGCAAATTGAT
CATATTTTCAATAAGGTTTTTCCGAAAATGCTCATGAACGGCATGCATCC
AATAGGACAAATTTTGAATTATGATGATCGCAGAGAATTTCAACATCGAT
CAGGATTAGAACATGTCCACGCTCAAGTACATATCAAAGATGCCCCTATA
ATTGACGAAAAAGACAGTAGTAAAGACAATCAAGTTGTTGATTTTATCGA
TAATTACATTACATGCTCATTACCAGATAAAAACGAATATCCGAAGCTTT
ACGAATTGGTGAATACTGTACAAAAACATCATCATACAACAACCTGTAGA
AAGAAAAGCGGATCAAGATGTAGATTCAAAGCCCCCTGGCCACCATGTGA
AGAAACTCGCATTATTCGAGGTAAACAAATCGATAAAAACGATTACAGAG
CAAGTAAAAAAATCTTAGATAAAGTTCTTGATGAAATAAATAATTGTAGT
AGTGATCTGCAAGATATTAGTCTTGATGATTTGTTGCGATCATGTGATAT
TTCAAGAGATGAATATTTCACTGCTTTAGACATGGTTCAAAAGAAGATAA
CAGTACTTTACAAAAGAACGCCAAATGAAACTAATATCGGCCCATACAAT
ACTGTAATGATTAGTATTTTACAATCAAACATGAATATTCAATACGTTAC
AAATATGTATGCGGTGCTAGCATATATAACTTCTTACATGTGCAAGCCAG
AAAGAAATATGAGTGAACTTATGAAAAAGGCACACAAAGAGGCATCCGGA
AAAGACGTAAAAGATAAGTTACGTGCTATTGGCAATGTTTTTTTAACTAA
ACGCAAAGTATCAACTCATGAAGCTATCAAGCGAACACTTTCTTTAAAAA
TGAAAACTTCTAATATCAATGTAGAATTCGTTATAACAGGTCCCAAAGAA
AAACGTACGCGAATCCTGAAAAGTCCATCTGAACTAGCAAAACTTGATCC
AGATTCCAAAAATGTTTACAAAAACAGTATGTTCGACAAGTATCAGAATC
GTCCTAACAAATTAAAAGATATGTGCTTAGCAGACTTTGCTTCTATTTAT
ACGTACCCAAAGAAAAAANN Coding sequence (CDS) from alignment at sc0002265:3755..10074- >TCONS_00040002 ID=TCONS_00040002|Name=TCONS_00040002|organism=Clytia hemisphaerica|type=CDS|length=6828bp|location=Sequence derived from alignment at sc0002265:3755..10074- (Clytia hemisphaerica)
ATCAAGATGCTATGGAAAAAGAAAAAGACCTAGAAACTGCCTCTAAAAGA
ATGAAAAATTTGCGACAAAATCTAGACCCTATGGAAAAAGAAAAAGTTTT
AAAATCTGACAAATTAAGGAAGAAAAAATTAAGAGAACATCAAGATGCCA
TGGAAAAAGAAAAAGATCGAGAAACTGCCTCTAAAAGAATGAAAAATTTG
CGACAAAATCAAGATGATTTGGAAAGAGAAAATACTCGTGTTCAAGATAA
ATTAAGGAAGAAAAATTATCGACTTCTAAACAAAATTGAAAGAGATAGAG
AGTTTCACAAAGTTCAAAGTAAAAGTATGGCTGATCCATCANATTATCGA
CTTTTAAACAAAATTGAAAGAGATAGAGAGTTTCACAAAGTTCAAAGCAA
AAGTATGGCTGATCCATCGATTACACTAAGTAAAGCATTTGAAATCGTTA
AACAAGACTTTGATTATGTTATAAGTGAAGGCCCAACAAATAAATGTCAT
ATTTGCATAAAATGGGAGTATAAAGGAAACACCAAAAGATTTCTCCACAA
AGAATATGAAAAATTGGCCATGTTTCAATTGTGTGATGTACCTAATACTG
ATTGCGATTCTGAAGAAATTTACTGGATTTGCCATCCATGTGATAAAGCT
ATAAAAAAGGAGCAACTGCCTGTACAAGCACAAGCCAATAATCTTCAGTT
ATCACCAAAACTTCCAGAATTAGAGGAATTATGCCCAATTGAAATGATGC
TAGTTTCCCAAATAATTCCATTTATGTTCATTGTACCAAAGCATAAAGGA
GGACAGCAAGGTTTAAAAGGACAGTGTGTTATGGTACCAGCAAATCTTGA
CAAAATTCAAAAGGTCTTACCAAGAGTTTGTAGTGACGAATTTTTGATTT
CACTTGCTCTAAAACGACGTCTTTCTGATAAAAGTTCAGTCAACAAACAA
AACATACGACCTGCTTTCGTAACAAAAGCATTACAAAGATTAGTTGAAGT
CAATAAATTTTATGAAAATATTGCACCAAATTATAGATGGGAAGATGAAA
GTTTACGATCAGACCCCGAATTATGGTCACTTTTAACTGATCAGAATGCT
CAACCTCAGGAAGATGAAAGCGATAGTGACGATAACATTGAAGGCAATGA
TAATAATCTTGAAAGGCAGATGAAAATTAATAACTCCTCTCAGCCTACTT
TATTGTATGATATTGATGGTGCAGCAATTTCTTCAGAAAAAGCTATTGAT
ATTACTCTTCAACAATCTACTACTGACATATCATCTGATCAAGTTGTTAA
TATTGCCCCCTGTGAAAATGAAATACCAGTATCATTTTATTCAGAACCTG
ATTGGGAGGCTTTAGCATTTCCAGCTCACTATCCTGATGCTAAAAATTAT
TTTAATTCACCGAGAGATAAGAATATAACTCCATCAAAATATATTCATGC
ACGATTAAAATCCTCAGACGATCGATTTGCTTCAGATCCACAATATATTT
TTAGTTCTTTGCATTGGATTGAAAGCTCGAATGTTGCTAGTGCAATTAGT
TTTTCGCAACAAAAAAATTTTCAAAGTGATATATCAGCAGGTAGATTAAT
GAATCCTGATAACGTTAGGCAAATGATTTCGGATGATCAAATTTTTCAAA
ACTCTTTCAAAAGTATACGAGGAACTCCACAGTGGTGCCATAATATGATG
TTAGATGTTTTAGCAAAATGTAGAGTTTTCGGACCTAGCACATATTTTCT
TACATGGACAGCAGCGTTATTCAAATGGACTAATATTATCAAAGTAGTCG
CAACACAATACGGAGAAAATCTAACTGATGAAGATGTAAACAATATGGAT
TGGAGCCAAAAAGTTCAATATTTTAAAAGGAACCCTGTGACAGTAGCCAG
GCAAATTGATCATATTTTCAATAAGGTTTTTCCGAAAATGCTCATGAACG
GCATGCATCCAATAGGACAAATTTTGAATTATGATGATCGCAGAGAATTT
CAACATCGATCAGGATTAGAACATGTCCACGCTCAAGTACATATCAAAGA
TGCCCCTATAATTGACGAAAAAGACAGTAGTAAAGACAATCAAGTTGTTG
ATTTTATCGATAATTACATTACATGCTCATTACCAGATAAAAACGAATAT
CCGAAGCTTTACGAATTGGTGAATACTGTACAAAAACATCATCATACAAC
AACCTGTAGAAAGAAAAGCGGATCAAGATGTAGATTCAAAGCCCCCTGGC
CACCATGTGAAGAAACTCGCATTATTCGAGGTAAACAAATCGATAAAAAC
GATTACAGAGCAAGTAAAAAAATCTTAGATAAAGTTCTTGATGAAATAAA
TAATTGTAGTAGTGATCTGCAAGATATTAGTCTTGATGATTTGTTGCGAT
CATGTGATATTTCAAGAGATGAATATTTCACTGCTTTAGACATGGTTCAA
AAGAAGATAACAGTACTTTACAAAAGAACGCCAAATGAAACTAATATCGG
CCCATACAATACTGTAATGATTAGTATTTTACAATCAAACATGAATATTC
AATACGTTACAAATATGTATGCGGTGCTAGCATATATAACTTCTTACATG
TGCAAGCCAGAAAGAAATATGAGTGAACTTATGAAAAAGGCACACAAAGA
GGCATCCGGAAAAGACGTAAAAGATAAGTTACGTGCTATTGGCAATGTTT
TTTTAACTAAACGCAAAGTATCAACTCATGAAGCTATCAAGCGAACACTT
TCTTTAAAAATGAAAACTTCTAATATCAATGTAGAATTCGTTATAACAGG
TCCCAAAGAAAAACGTACGCGAATCCTGAAAAGTCCATCTGAACTAGCAA
AACTTGATCCAGATTCCAAAAATGTTTACAAAAACAGTATGTTCGACAAG
TATCAGAATCGTCCTAACAAATTAAAAGATATGTGCTTAGCAGACTTTGC
TTCTATTTATACGTACCCAAAGAAAAAAATGGCATTAATGTTTCGACAGG
ATGTTCAAAATCTCCCATACCTACTGAAAAAAAAAATTTCATTGACCAAA
GATAAGAAAAATGAATCTGGTGTAGAAGAGTTTGTATCGTTTGATAAACA
AAACTCAGAACAAATGATGAAGAGAGCACTTCTTAAGGAAATAAAAATTC
AAGAGCACAAAATAACACAATCAAGAAAGAAGCTAGTGTCTGATAAAGAA
AATTCCACTCCCATTAAAAGAAAGCGAAGAATCACTACAAAGTCCAAAAA
ATTTTCAATGAAAAAGGCAAGATATAATCTTAATGACATCAAAAAAGAGC
TCTTTCGGGAAACTGATAAAGAAAGGAAACAAGAATACAGAGAAAATCAA
GACGATATGGAAAAAGAAAAAGATCGAGAAACTGCCTCTAAAAGAATGAA
ATATTTGCGACAAAATCAAGATGCTATGGAAAAAGAAAAAGACCTAGAAA
CTGCCTCTAAAAGAATGAAAAATTTGCGACAAAATCTAGACCCTATGGAA
AAAGAAAAAGTTTTAAAATCTGACAAATTAAGGAAGAAAAAATTAAGAGA
ACATCAAGATGCCATGGAAAAAGAAAAAGATCGAGAAACTGCCTCTAAAA
GAATGAAAAATTTGCGACAAAATCAAGATGATTTGGAAAGAGAAAATACT
CGTGTTCAAGATAAATTAAGGAAGAAAAATTATCGACTTCTAAACAAAAT
TGAAAGAGATAGAGAGTTTCACAAAGTTCAAAGTAAAAGTATGGCTGATC
CATCANATTATCGACTTTTAAACAAAATTGAAAGAGATAGAGAGTTTCAC
AAAGTTCAAAGCAAAAGTATGGCTGATCCATCGATTACACTAAGTAAAGC
ATTTGAAATCGTTAAACAAGACTTTGATTATGTTATAAGTGAAGGCCCAA
CAAATAAATGTCATATTTGCATAAAATGGGAGTATAAAGGAAACACCAAA
AGATTTCTCCACAAAGAATATGAAAAATTGGCCATGTTTCAATTGTGTGA
TGTACCTAATACTGATTGCGATTCTGAAGAAATTTACTGGATTTGCCATC
CATGTGATAAAGCTATAAAAAAGGAGCAACTGCCTGTACAAGCACAAGCC
AATAATCTTCAGTTATCACCAAAACTTCCAGAATTAGAGGAATTATGCCC
AATTGAAATGATGCTAGTTTCCCAAATAATTCCATTTATGTTCATTGTAC
CAAAGCATAAAGGAGGACAGCAAGGTTTAAAAGGACAGTGTGTTATGGTA
CCAGCAAATCTTGACAAAATTCAAAAGGTCTTACCAAGAGTTTGTAGTGA
CGAATTTTTGATTTCACTTGCTCTAAAACGACGTCTTTCTGATAAAAGTT
CAGTCAACAAACAAAACATACGACCTGCTTTCGTAACAAAAGCATTACAA
AGATTAGTTGAAGTCAATAAATTTTATGAAAATATTGCACCAAATTATAG
ATGGGAAGATGAAAGTTTACGATCAGACCCCGAATTATGGTCACTTTTAA
CTGATCAGAATGCTCAACCTCAGGAAGATGAAAGCGATAGTGACGATAAC
ATTGAAGGCAATGATAATAATCTTGAAAGGCAGATGAAAATTAATAACTC
CTCTCAGCCTACTTTATTGTATGATATTGATGGTGCAGCAATTTCTTCAG
AAAAAGCTATTGATATTACTCTTCAACAATCTACTACTGACATATCATCT
GATCAAGTTGTTAATATTGCCCCCTGTGAAAATGAAATACCAGTATCATT
TTATTCAGAACCTGATTGGGAGGCTTTAGCATTTCCAGCTCACTATCCTG
ATGCTAAAAATTATTTTAATTCACCGAGAGATAAGAATATAACTCCATCA
AAATATATTCATGCACGATTAAAATCCTCAGACGATCGATTTGCTTCAGA
TCCACAATATATTTTTAGTTCTTTGCATTGGATTGAAAGCTCGAATGTTG
CTAGTGCAATTAGTTTTTCGCAACAAAAAAATTTTCAAAGTGATATATCA
GCAGGTAGATTAATGAATCCTGATAACGTTAGGCAAATGATTTCGGATGA
TCAAATTTTTCAAAACTCTTTCAAAAGTATACGAGGAACTCCACAGTGGT
GCCATAATATGATGTTAGATGTTTTAGCAAAATGTAGAGTTTTCGGACCT
AGCACATATTTTCTTACATGGACAGCAGCGTTATTCAAATGGACTAATAT
TATCAAAGTAGTCGCAACACAATACGGAGAAAATCTAACTGATGAAGATG
TAAACAATATGGATTGGAGCCAAAAAGTTCAATATTTTAAAAGGAACCCT
GTGACAGTAGCCAGGCAAATTGATCATATTTTCAATAAGGTTTTTCCGAA
AATGCTCATGAACGGCATGCATCCAATAGGACAAATTTTGAATTATGATG
ATCGCAGAGAATTTCAACATCGATCAGGATTAGAACATGTCCACGCTCAA
GTACATATCAAAGATGCCCCTATAATTGACGAAAAAGACAGTAGTAAAGA
CAATCAAGTTGTTGATTTTATCGATAATTACATTACATGCTCATTACCAG
ATAAAAACGAATATCCGAAGCTTTACGAATTGGTGAATACTGTACAAAAA
CATCATCATACAACAACCTGTAGAAAGAAAAGCGGATCAAGATGTAGATT
CAAAGCCCCCTGGCCACCATGTGAAGAAACTCGCATTATTCGAGGTAAAC
AAATCGATAAAAACGATTACAGAGCAAGTAAAAAAATCTTAGATAAAGTT
CTTGATGAAATAAATAATTGTAGTAGTGATCTGCAAGATATTAGTCTTGA
TGATTTGTTGCGATCATGTGATATTTCAAGAGATGAATATTTCACTGCTT
TAGACATGGTTCAAAAGAAGATAACAGTACTTTACAAAAGAACGCCAAAT
GAAACTAATATCGGCCCATACAATACTGTAATGATTAGTATTTTACAATC
AAACATGAATATTCAATACGTTACAAATATGTATGCGGTGCTAGCATATA
TAACTTCTTACATGTGCAAGCCAGAAAGAAATATGAGTGAACTTATGAAA
AAGGCACACAAAGAGGCATCCGGAAAAGACGTAAAAGATAAGTTACGTGC
TATTGGCAATGTTTTTTTAACTAAACGCAAAGTATCAACTCATGAAGCTA
TCAAGCGAACACTTTCTTTAAAAATGAAAACTTCTAATATCAATGTAGAA
TTCGTTATAACAGGTCCCAAAGAAAAACGTACGCGAATCCTGAAAAGTCC
ATCTGAACTAGCAAAACTTGATCCAGATTCCAAAAATGTTTACAAAAACA
GTATGTTCGACAAGTATCAGAATCGTCCTAACAAATTAAAAGATATGTGC
TTAGCAGACTTTGCTTCTATTTATACGTACCCAAAGAAAAAAATGGCATT
AATGTTTCGACAGGATGTTCAAAATCTCCCATACCTACTGAAAAAAAAAA
TTTCATTGACCAAAGATAAGAAAAATGAATCTGGTGTAGAAGAGTTTGTA
TCGTTTGATAAACAAAACTCAGAACAAATGATGAAGAGAGCACTTCTTAA
GGAAATAAAAATTCAAGAGCACAAAATAACACAATCAAGAAAGAAGCTAG
TGTCTGATAAAGAAAATTCCACTCCCATTAAAAGAAAGCGAAGAATCACT
ACAAAGTCCAAAAAATTTTCAATGAAAAAGGCAAGATATAATCTTAATGA
CATCAAAAAAGAGCTCTTTCGGGAAACTGATAAAGAAAGGAAACAAGAAT
ACAGAGAAAATCAAGACGATATGGAAAAAGAAAAAGATCGAGAAACTGCC
TCTAAAAGAATGAAATATTTGCGACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00040002-exon-sc0002265-1575043694:7556..10074 | TCONS_00040002-exon-sc0002265-1575043694:7556..10074 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1575043694:6804..7496 | TCONS_00040002-exon-sc0002265-1575043694:6804..7496 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1575043694:3755..6734 | TCONS_00040002-exon-sc0002265-1575043694:3755..6734 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1510915933:7556..10074 | TCONS_00040002-exon-sc0002265-1510915933:7556..10074 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1510915933:6804..7496 | TCONS_00040002-exon-sc0002265-1510915933:6804..7496 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1510915933:3755..6734 | TCONS_00040002-exon-sc0002265-1510915933:3755..6734 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1491911889:7556..10074 | TCONS_00040002-exon-sc0002265-1491911889:7556..10074 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1491911889:6804..7496 | TCONS_00040002-exon-sc0002265-1491911889:6804..7496 | Clytia hemisphaerica | exon |
| TCONS_00040002-exon-sc0002265-1491911889:3755..6734 | TCONS_00040002-exon-sc0002265-1491911889:3755..6734 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002265 | supercontig | sc0002265:3755..10074 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR025476 | Helitron_helicase-like |
Blast
The following BLAST results are available for this feature:
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