XLOC_024226 (gene) - C. hemisphaerica

Overview
NameXLOC_024226
Unique NameXLOC_024226
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002265:3755..10074-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024226 ID=XLOC_024226|Name=XLOC_024226|organism=Clytia hemisphaerica|type=gene|length=6320bp|location=Sequence derived from alignment at sc0002265:3755..10074- (Clytia hemisphaerica)
CCAAAACCGGCGTAAAACAGATATCCTTCATTTTTTCGAGTTATACTTGA CAGATTTTCATGATTTTTTGCACAATGATGCAAAATGGCAATGCCAAAGA TGTAGCGGAGCCCGATTTTCGAAAAAAAAATTATTTCCGGTCGCTAGGGC CGGAAATGTCTCGCAAAAGGCGGTTTTTTGGGATTTCTCGAGATTTTCTC GTTAGTTTTTTCTGATTTTTTGTGCATAGACGCGTGTTAGTACTGCCGAA AAGATGTTCAAAACTGTTTTCCGAAACAAAAAAATTTCCGGCCTGTAGAA CCGGAAATGTGAAATGTGCCAGAAATCGCCGTTTTTACGTATTTCCGTGA CACTTTTTCAACTTATTTGATCGTTTCTTTACATAAATAGGTTCCAAGTT AGAGAGAATGGCAATTTTTCAAAACATTGACTTTTTTTAATTTGACACAC TTATTTCATAAGAAAAAGAAAATCAAAAAGTAAACAAAAGTGTGCTCTAA AAAATTTTCTCTTCTTAAAATGACCCCCTGATTGAAAGAGAGATTTTCTT AAATGTGTTTATAAAGTGACGTCAGAATAATAAATGAGAATATAGGCAAT TTTACTAGACTACTAATTTTCCTCTTTCAGTTTTCATCTAACTAGTTAAT TTTGCATTAAGTATCATTATTAAATTAGTAGTCTAGATCTAGACTTGCCG GATGCAAGAGACTTTTTTCTCTTATATATTCCCGCGCTTTTTAGCGAGAC AAGTTTTCATTCATTTTTTTCTTTCTACTATTGTCGTGCTTCACCGTAGA GTTCTTTTATTTTTTTCTTTCTCTTTTGTATTTATAGAAAGGTAAATGTA TACGCACCACGATGAAGATAAAGTCTAGGAATATTTTGTTTGTTTGGTGA AATGTAGATGTATTATAGGATAATATGTAGTCTCATGAAATGATATCTTG TGTGTTGAAGAGTGAGACAGCGGAAGGGAAGTTTGATTATTGTAAAAAAA AATCGTTATGTTGTTTCATTTAAAATATGGAGGTATAAAGAAATACTTTT ATACCTCCATGAACATTTCAATGTATACGCTTCTTTTCTTTAGTTTTAGA GTAAAAAAACAGTATTAAAAACATTAAAAAAAGAAAGCATTTGTATTTGA TCAAAAATCAAAGTCAAAAATCATTGGAGAATTGATCATCACTTGGATCC TTGGACAACACTTGCGTTAGAAGCAGTTTCATTTTCCAGCTGGTGACTTA CTCAACAAGTTTTACGATAATCAAGAATTGAAGCAACAAAAGAGAAGAAA GAAGAAAAGAAGAAAATTATTTTACTAGGAAAACTTTGTTAGATTTAGTG AAAAAAAAAAAGAATAAAAAAAAGTAAGAAAAAGAGGCATAAAAAAGAAA TAAAAAATAAAAAAAATATAAAAACAAAAACAAAAATAAAAGAATTGAAA AGAAAAGAAAAGAAATGCCCATCAAAAGAGCTGACACCAGCCAAAGTCCA CGAAGGCACCGCCAAGGTAGTAAGGGATACTCTCTTTTACTTCCTTGGTT GGACTATAAAAGCCACTGCGGAGGTCAAACAAGGCACGACCCTTATAAAC GCCACTCAAACTTACAAACTTACAATGCAAATAATAAACCTTTATCTTAT ATTTACGATACAAGTTTTTTATTAATCACTCAAGGTATCATAGATGGAGA TGTAGAATCTAATCCGGGGCCGAATCAAAGCACGTATAACTCAACGATAG GTAGACCAAAAGGGCAAACAAAGAAAAAGGGTTTCCGTGGAACTCCAAAA AAAGCAAATGGTAAAGAAAATGTTGCAGAGCAAAAAGTAATAGGTTTAAA AAATATCGGGCAAAATGTCTGCTTTTTTAATTCAATCGTTCAATCATTAT ACACTATAGATAGTTTCTGTGAATCTGTTAAATCTCTGGATACTAATAAC CCAAGTCTATTAGCAATAAAAGAATTATTTTCAACGATAGAAAGGTCTGA AACTCCGATAGAAACATATCAATTCATAAAATCGATAGAACTACCTGGCT ACGACTATATACGGCGAGAACAATTTGATGCACAAGAATGTATGATGCAT ATTTTGAATCATGTATATAATCTTAATCCTGATGGATCTGTTCCTACAGA AAGTTTATTTCGTCTGTCCTTTTTAGAATCGGTTTTATGTCAAAATTGTA ACAATGCTTCTGAAAAAACTGTTTTTGATAATATGTGTCAGATTCGATTT TCTGATCCAAATAACCCTGAGAATTCGGTAAAAGATTCAATTGAAAAACT AACCAATGATCCTTATGGTAACTTTCTTCAAGACACGTATGAATGTGCAA ATTGCCCGATTAAAACAAATGCCACACAAAATATAACGTTATTGAATGTT TCTGATTCTTTGATCATTCAACTTGTCATTTTTAGCTTTAATCAGACCAC TGGAGCTCCTCTGAAATTATCTCCAAACTTAGCAATCGAGACAAAAATTG AAAATGTCCTATTGGGAACATTTGAGTTAACGGCAATCATTTATCACCAT GGCAATACAGCTAATANCTATTGGGAACATTTGAGTTAACGGCAATCATT TATCACCATGGCCATACAGCTAATAGTGGACATTATACTGCTGTTGTGAA ACACGGCGAGCAATGGTATTCAGTTGATGATGATCGTGTTTTACCTATTG AGGCTGATGTTTTCAATTGTTCGGTTAAGGATCATATGGTTCCGTATATT CTACTTTACAGGAAATTTAATAGGGAAATAGATCTCATGCCAGTAAATGC AAATAATCAACTAGATAACCCAGACCACATTAAAGATGGCATTAATGTTT CGACAGGATGTTCAAAATCTCCCATACCTACTGAAAAAAAAAATTTCATT GACCAAAGATAAGAAAAATGAATCTGGTGTAGAAGAGTTTGTATCGTTTG ATAAACAAAACTCAGAACAAATGATGAAGAGAGCACTTCTTAAGGAAATA AAAATTCAAGAGCACAAAATAACACAATCAAGAAAGAAGCTAGTGTCTGA TAAAGAAAATTCCACTCCCATTAAAAGAAAGCGAAGAATCACTACAAAGT CCAAAAAATTTTCAATGAAAAAGGCAAGATATAATCTTAATGACATCAAA AAAGAGCTCTTTCGGGAAACTGATAAAGAAAGGAAACAAGAATACAGAGA AAATCAAGACGATATGGAAAAAGAAAAAGATCGAGAAACTGCCTCTAAAA GAATGAAATATTTGCGACAAAATCAAGACCCTATGGAAAAAGAAAAAGTT TTAAAATCTGACAAATTAAGGAAGAAAAAATTCAGAGAACATCAAGATGC TATGGAAAAAGAAAAAGACCTAGAAACTGCCTCTAAAAGAATGAAAAATT TGCGACAAAATCTAGACCCTATGGAAAAAGAAAAAGTTTTAAAATCTGAC AAATTAAGGAAGAAAAAATTAAGAGAACATCAAGATGCCATGGAAAAAGA AAAAGATCGAGAAACTGCCTCTAAAAGAATGAAAAATTTGCGACAAAATC AAGATGATTTGGAAAGAGAAAATACTCGTGTTCAAGATAAATTAAGGAAG AAAAATTATCGACTTCTAAACAAAATTGAAAGAGATAGAGAGTTTCACAA AGTTCAAAGTAAAAGTATGGCTGATCCATCANATTATCGACTTTTAAACA AAATTGAAAGAGATAGAGAGTTTCACAAAGTTCAAAGCAAAAGTATGGCT GATCCATCGATTACACTAAGTAAAGCATTTGAAATCGTTAAACAAGACTT TGATTATGTTATAAGTGAAGGCCCAACAAATAAATGTCATATTTGCATAA AATGGGAGTATAAAGGAAACACCAAAAGATTTCTCCACAAAGAATATGAA AAATTGGCCATGTTTCAATTGTGTGATGTACCTAATACTGATTGCGATTC TGAAGAAATTTACTGGATTTGCCATCCATGTGATAAAGCTATAAAAAAGG AGCAACTGCCTGTACAAGCACAAGCCAATAATCTTCAGTTATCACCAAAA CTTCCAGAATTAGAGGAATTATGCCCAATTGAAATGATGCTAGTTTCCCA AATAATTCCATTTATGTTCATTGTACCAAAGCATAAAGGAGGACAGCAAG GTTTAAAAGGACAGTGTGTTATGGTACCAGCAAATCTTGACAAAATTCAA AAGGTCTTACCAAGAGTTTGTAGTGACGAATTTTTGATTTCACTTGCTCT AAAACGACGTCTTTCTGATAAAAGTTCAGTCAACAAACAAAACATACGAC CTGCTTTCGTAACAAAAGCATTACAAAGATTAGTTGAAGTCAATAAATTT TATGAAAATATTGCACCAAATTATAGATGGGAAGATGAAAGTTTACGATC AGACCCCGAATTATGGTCACTTTTAACTGATCAGAATGCTCAACCTCAGG AAGATGAAAGCGATAGTGACGATAACATTGAAGGCAATGATAATAATCTT GAAAGGCAGATGAAAATTAATAACTCCTCTCAGCCTACTTTATTGTATGA TATTGATGGTGCAGCAATTTCTTCAGAAAAAGCTATTGATATTACTCTTC AACAATCTACTACTGACATATCATCTGATCAAGTTGTTAATATTGCCCCC TGTGAAAATGAAATACCAGTATCATTTTATTCAGAACCTGATTGGGAGGC TTTAGCATTTCCAGCTCACTATCCTGATGCTAAAAATTATTTTAATTCAC CGAGAGATAAGAATATAACTCCATCAAAATATATTCATGCACGATTAAAA TCCTCAGACGATCGATTTGCTTCAGATCCACAATATATTTTTAGTTCTTT GCATTGGATTGAAAGCTCGAATGTTGCTAGTGCAATTAGTTTTTCGCAAC AAAAAAATTTTCAAAGTGATATATCAGCAGGTAGATTAATGAATCCTGAT AACGTTAGGCAAATGATTTCGGATGATCAAATTTTTCAAAACTCTTTCAA AAGTATACGAGGAACTCCACAGTGGTGCCATAATATGATGTTAGATGTTT TAGCAAAATGTAGAGTTTTCGGACCTAGCACATATTTTCTTACATGGACA GCAGCGTTATTCAAATGGACTAATATTATCAAAGTAGTCGCAACACAATA CGGAGAAAATCTAACTGATGAAGATGTAAACAATATGGATTGGAGCCAAA AAGTTCAATATTTTAAAAGGAACCCTGTGACAGTAGCCAGGCAAATTGAT CATATTTTCAATAAGGTTTTTCCGAAAATGCTCATGAACGGCATGCATCC AATAGGACAAATTTTGAATTATGATGATCGCAGAGAATTTCAACATCGAT CAGGATTAGAACATGTCCACGCTCAAGTACATATCAAAGATGCCCCTATA ATTGACGAAAAAGACAGTAGTAAAGACAATCAAGTTGTTGATTTTATCGA TAATTACATTACATGCTCATTACCAGATAAAAACGAATATCCGAAGCTTT ACGAATTGGTGAATACTGTACAAAAACATCATCATACAACAACCTGTAGA AAGAAAAGCGGATCAAGATGTAGATTCAAAGCCCCCTGGCCACCATGTGA AGAAACTCGCATTATTCGAGGTAAACAAATCGATAAAAACGATTACAGAG CAAGTAAAAAAATCTTAGATAAAGTTCTTGATGAAATAAATAATTGTAGT AGTGATCTGCAAGATATTAGTCTTGATGATTTGTTGCGATCATGTGATAT TTCAAGAGATGAATATTTCACTGCTTTAGACATGGTTCAAAAGAAGATAA CAGTACTTTACAAAAGAACGCCAAATGAAACTAATATCGGCCCATACAAT ACTGTAATGATTAGTATTTTACAATCAAACATGAATATTCAATACGTTAC AAATATGTATGCGGTGCTAGCATATATAACTTCTTACATGTGCAAGCCAG AAAGAAATATGAGTGAACTTATGAAAAAGGCACACAAAGAGGCATCCGGA AAAGACGTAAAAGATAAGTTACGTGCTATTGGCAATGTTTTTTTAACTAA ACGCAAAGTATCAACTCATGAAGCTATCAAGCGAACACTTTCTTTAAAAA TGAAAACTTCTAATATCAATGTAGAATTCGTTATAACAGGTCCCAAAGAA AAACGTACGCGAATCCTGAAAAGTCCATCTGAACTAGCAAAACTTGATCC AGATTCCAAAAATGTTTACAAAAACAGTATGTTCGACAAGTATCAGAATC GTCCTAACAAATTAAAAGATATGTGCTTAGCAGACTTTGCTTCTATTTAT ACGTACCCAAAGAAAAAANN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00040003TCONS_00040003Clytia hemisphaericatranscript
TCONS_00040002TCONS_00040002Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00040002-proteinTCONS_00040002-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002265supercontigsc0002265:3755..10074 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.71 0.73 1.17 0.88 0.69 0.71 0.9 1.01 0.41 0.47 0.26 0.32 0.25 0.31 0.33 0.39 0.31 0.44 0.27 0.25 0.51 0.68 0.27 0.1 0.2 0.32 0.22 0.25 0.23 0.25