TCONS_00039972 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039972
Unique NameTCONS_00039972
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2797

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039972 ID=TCONS_00039972|Name=TCONS_00039972|organism=Clytia hemisphaerica|type=transcript|length=2797bp
CGAAATTTTATAAGGTTTAAGATTTTCTTATTAAAGTGAAAGTATACTAA
ATGTCGTTACcgtaaaattgataaaaatctcatttgcatAATTCGCgcga
aaaagaaatttacctGAGACGAGTTAAATATCCCGGAGCCGATTTGAAAT
ATAAGTGGACctcaaagtaaaaaaagaaatctcgcTACCGTAATAATAGT
GAAGCTTCTTCCCGCCAAACACAGCATCTCTGGTTGTAGCTGGTTGGAAC
CAAATTTCAGCTGAGCGTCTTTAACTACGTCTTTAACTTCTTAACTTATA
ACTTAGAGACTGTTAGACTAAAACAGAAAATGGTTAAACGAAGCTTTGAT
TTCGAAGAGACTGGCGTCACAGTGGAATTAAAGTACCAAGACGGGATTGT
TTCCAAAGGAGAGGCTGCCACCTATGTAATTCGCCGTATTGTTGGTAGCT
TAACTGATTACCCATCAGATGAGTTTAACCATACCACAGGACAATTgcat
cTCGACACTCCCTTGATTGATGCGAGCGATTTAGAAAAAGATCAGATGGT
CTTTGCACTATACAAACTAGAGGATCCCATGAGATATTATCCAGCCATGG
TAACATCTGTCAAATCAAACAAGAGTAAGTATAATATTAACCTGCTTTAC
TGTGAAAAAAGTACAAACCTGCAAAAAAAGCTCCTCTTCTTTGCCCAAAA
TTTTCTCTATCAGCCTTCTTTTCAAAACCTTTCCACTCAAGACATTGTTC
ATTTTGTTCCATACACCCCCTTATCCCCAGACCCCCTACCTGTTTATTAG
ATTCCCAAGAGTAAAAACGATGAATGTAAGCCATTTTCAGTTTCCATTGA
TGTTTATGATATATCAAAATCTTtgccaaaaataaattttattcagAAAA
GAAGGAAGAAAAGAAACAGAAAGCACAAACGAGAAAGAAAACAGAATCCC
CAAAAGAGAAAAaacagaagaagaaaatgacacCAAAAGATAAAAGTACA
CTTCCTCATAATCTTTGTACTTTCTACATAAGACGTATCAAATACATAGT
AGACAAGAATAACGTTCTTTCTAAAAATTGGTTGCAATTTTGTTCTGTCA
TCATCTAGACCAGATAGTCTCATTTCTACTTctctgataatttttgatga
cattggaaaatcaaggctcagaccCCATAAAATGTGGCCTAGCTTGGTGT
GTAAAACCCCATTTCTGTTTGACATGAGAATGTCTACTTTGACCACTGAA
TCATGGTGTCCAGAGCTGCCAACCCTTCTCCTGTAGGGAGCTCTAACTTT
GTCAACATTTTCAACACAAAAAAACTTGGATTTTTAGGACAGAACTAAAT
GCTAAAACCAATATTAATTAACTTAAAATGTGTTCTTAGATGTAATTGTA
CAGAATGACGAAGCAGCAACCATTAGCCTAAACAGCACAGATGAGGATGC
TTGTTTGGCAGCCCAAGTCGCTGctaaattaaaacaaattagaaaattCA
AAGAACAAGCTGCCCTAGCAAGACAGCCAATGCCAGgtgtttttttgcaa
aatgatcaaCAAACAAGCAATACATCAAGTATAGATGATCAACCAGCAAG
CGTTTCACCAAATAGAATTGATTATCCAAAAGGTGCTACACCAAACAGAA
TTAATCAACCAAAAGGTTCTACACCAAATAGAATCGATCATCCAACAAGC
GCTACACCAAATAGAGATGATCAACCAACAAGTGCTACACCAAATATAGA
TGATCAACCAGCAAGTGCTACACCAAATATAGATGATCAACCAGCAAGGG
TTTCACCAAATAGAATTGATTATCCAAAAGGTGCTACACCAAATAGAATT
GATTATCCAAAAGGTGCTACACCAAACAGAATTGATCAACCAAAAAGTTC
TACACCAAACAGAATTGATCAACCAACAACCGCTACACCAACTAGAATTG
ATCAACCAACAAGCGCTACTCCAACTAGAATTGATCAACCAACAAGCGCT
ACTCCAACTAGAATTGATCAACAAAGAAGTCCTACATCAAATAGAATTGA
TCATCCAACAAATGCCACACCAAATAGAATTGATCAACCAACAAGTGCTG
ATTCGCCAGAGTACCCATTTCCAGCAAGAAAACCACAAGACAATCAAGTT
GACTTCACCAAAATTCAACAAGCTGaagaaaaaattatcaaacaaAGAGA
GAAAGACAATCTAAAAACTGCACAGGCTGCACAATCCAAACTGAAAACCT
ATGAACTCAATAGAACAgttatggagaaaatttttcaagatCAAGTCACA
AACAGTTATCAACAAGATCCTCATCATAGCAGTGTCCCTGGTGGTGTCAC
AACAAAACCATGCTCATCAAGAAACCCGTATCTTGACTTGTTGAAAAATC
CATGTTCAGAGTGCTGGAAAAAAGAATCTGATCTCTTTCATCTGAGACAG
CAGCTAGAAGAAAGTGAgttctttgcttttttcaacTCAACagaaagtgc
attttttgggtcaccgataaaccagttatcagacgcAAGCTCTACAATac
agaaatattttactcgttctcgatattttcgcatattttccttgtctaaa
ggctcggaaaatatgatgcaaaaaaaattggaactcGTAGAATATTTCTT
GTATTGTACTCACAACTTtctgataactattacatattttttactttttt
aaaacgTACAACTTTGTGCTGAACCTTTTTACCTCCTTTGTCATATTATG
CACAGTAAGTTGGTGcgctcataaaaaaaattaaatggaaaatggaa
Run BLAST on NCBI

transcript from alignment at sc0002260:12649..21899+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039972 ID=TCONS_00039972|Name=TCONS_00039972|organism=Clytia hemisphaerica|type=transcript|length=9251bp|location=Sequence derived from alignment at sc0002260:12649..21899+ (Clytia hemisphaerica)
CGAAATTTTATAAGGTTTAAGATTTTCTTATTAAAGTGAAAGTATACTAA
ATGTCGTTACcgtaaaattgataaaaatctcatttgcatAATTCGCgcga
aaaagaaatttacctGAGACGAGTTAAATATCCCGGAGCCGATTTGAAAT
ATAAGTGGACctcaaagtaaaaaaagaaatctcgcTACCGTAATAATAGT
GAAGCTTCTTCCCGCCAAACACAGCATCTCTGGTTGTAGCTGGTTGGAAC
CAAATTTCAGCTGAGCGTCTTTAACTACGTCTTTAACTTCTTAACTTATA
ACTTAGAGACTGTTAGACTAAAACAGAAAATGGTTAAACGAAGCTTTGAT
TTCGAAGGTGAGTAGATATGATAGAAATACCCGTTTATTCTCAGCAATCT
GTAGACTATTTGACtatttgacaaacttttttcaccAACCCccttttgga
aatttcgaataACAAATGAAAGCGTTTCCCGTATTTTTTGTGTggagagt
taggtctacactgtcaaGGCGAACTGAAATTTCCTCTAATAAGAGCATAA
TCATTATTTTGAATGGTTCCTAGACAAGATTTTTTCTATCTNACCGTCGT
GGCCCAGTGGTATAGACTACGTGTTTCGTAATCGGAAACATGTAGGTTCG
AACCGgggtaaaatattgaaaagtttcaaaaaattttctaagtccCCGTG
CTTGTCGGTGCATCATGAAGATTTAGCCATAGGTTTCCATTTGCTTGTCT
GCCATCTTTGCcgcgaaagcgaaagtgaatcTTATCTTAGCTTACGGACA
CGATAACTCTTTTACGGAGCCGAAATTTTATAAGGTTTAAGATTTTCTTA
TTAAAGTGAAAGTATACTAAATTTCGTTACcgtaaaattgataaaaatct
catttgcatAATTCGCgcgaaaaagaaatttacctGAGACGAGTTAAATA
TCCCGGAGCCGATTTGAAATATAAGTGGACctcaaagtaaaaaaagaaat
ctcgcTACCGTAATAATAGTGAAGCTTCTTCCCGCCAAACACAGCATCTC
TGGTTGTAGCTGGTTGGAACCAAATTTCAGCTGAGCGTCTTTAACTACGT
CTTTAACTTCTTAACTTATAACTTAGAGACTGTTAGACTAAAACAGAAAA
TGGTTAAACGAAGCTTTGATTTCGAAGGTGAGTAGATATGATAGAAATAC
CCGTTTATTCTCAGCAATCTGTAGACTATTTGACtatttgacaaactttt
ttcaccAACCCccttttggaaatttcgaataacaaatgaaagtaaaattt
tgaaaaagacgGGCTGCGAAGAAACTATTGATGCTAGTTTTTGAAGAGAG
AGCACATTGATCCTGGGTTTGTAAACCTTCAAATACGACTCCCTGCCCCG
ATTCCCCAGACTCCAGAGATTTTCTTGTTTTGTGCCCGGGGATtttaaca
taactttttgatACTTAAGCCGGACTGGATGCGCGATCCCTGCGACGTAC
CTAAACTATCAGGTGATTGCCTAGGCGGGCTTCAATTTCACAATCTCTAT
TCTGCCCGCTTTCTGCATGGTTTGTTTGTCAGGGCtataggaaatatttt
tttcgttcCTCGCCCGGGACATTTGGCCCATTAGTGTTGCGAGCCTGATC
CCATAAAACCATATTTTACTTGCGAACACACGTCCACTTATGCGGCCTTG
CAGTTCACTTATCTCGCTGCACGGTTTGTTTGTCCGggaatagaaatttt
ttttcgttcccCCGACATTTGCCCCATCACGCCCCATCTTGCCCAGTGTT
GCAAGCTCAATCCCATAAAACCATATTTTAGCTATGAACGGAAATCCCcg
ttagaaaaaatcaaaacatcgatAAGTGGTTAAACTTTCTAAATAACTTT
GCTAAATCAAAACACGGGAAAACATCATGCGACGTATGACCACAACTCCC
GCTCGCttcaatcaagaatttggtCACATGATCTGCCAGCAAAAATCGAC
CAATGAAATCGTTTTTCTATATAtcttcttttgtaaaaaaacaaNTCAAG
AATTTGGTCACGTGATCTGCCAGCAAAAATCGATATCTATAtatcttttt
tgtaaaaaaacaagAACCTTCTCACTTCCAAATGTTATGTCcagcagtgt
agacctaaagctctaaaccagcatctaataacatgaaaaccagaatatga
ttcttcaatgggaatcaaaactataaagtgcacttacaaacatcaatNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctgtcaagagccttgtaaac
attccaacaactttcatcgaaatgatctatcacagctcagtctaccattt
ttagcgcagtccgaggattgagccgagaacgcacCGCAAACTCCTGTGCG
GGTGAAAAACtacaatctgtcaatcattttctcaagcgaagagtacgcgt
agcgattctagctttacgatagtgccgcgggtcatcaatggatagtatag
accttttttcaaagaggccaccctgtttaataattatgtagtccagcaga
aaatcaatgataaaaccatgcataattattacaatatgcatgatactaTA
ATtgtgcatggctctatcattgtttttatggctggactacacaattattc
aacaggacgtcctctttgaaaaaaggtctattcaattatcattatccctt
tattttcattcctagaacttttgcaaaaaaaggaaaaatagataagttgt
attttttactgctctattcacatactgaatttgaaagatcttctatgtgg
cgtttttttgcaaacttcaaaaaactgatttttgtcctgcctttgcggga
cttaGGCTCTAGTTCTacttctagttctagttctattgaattatcacata
atacattacgtacattttcgtgattttaaacataaaggataaaataaacG
ACGCTGGTAAAAGGaaagcttaagtgcttgagtgcagcatagggtacaaa
gtccagacacgcgtttcccgtaatttttgtgtggagagttaggtctacac
tgtccaGGCGAACTGAAATTTCCTCTAATAAGAGCATAATCATTATTTTG
AATGGTTCCTAGACAAGATTTTTTCTATCTTCCAGAGACTGGCGTCACAG
TGGAATTAAAGTACCAAGACGGGATTGTTTCCAAAGGAGAGGCTGCCACC
TATGTAATTCGCCGTATTGTTGGTAGCTTAACTGATTACCCATCAGATGA
GTTTAACCATACCACAGGACAATTggtaagttttgaaaaaaatcaaaaat
ttcaattttggctattatgttttttataagttttgcaataatattttatg
ttaatatcgtcaacggctctaacttgggacgagtggtcATATTATGGGAT
GGTTgactttctggtctgtattttcacttactgttaaatctctcttgaca
acaagtttgttttcaaTGAGATTTGCAACTATGTTAATTAagtgactttg
gaggttcagtaAAATGATGGCCGAATTGCTATCCCATATTTTATCagact
gtcccaagttagaactctttgaaaaaaagcaaatttttgaattttggcaa
ttttttattttttgatgaccatcattgttttatgaaaattttttattaat
aTCCAAAGTTTATTCCCCACAGAGTTTATCACTATGAGAGGTAAAGTTCC
ACTAAGAATTCAAGGTTCAATCTGCTATATCTTGAGAACCACTTGAGATA
TGAAGCTGAATCTTGTTACATCATCTtactgaaattcaaaatttcagcaa
aatctgaGACATCAAGTTCACACATtgaaatttcttagaaaaaatggctc
ttaaattAACACTGATTTCTAAATATGTtccacattttcaaattttagca
tcTCGACACTCCCTTGATTGATGCGAGCGATTTAGAAAAAGATCAGATGG
TCTTTGCACTATACAAACTAGAGGATCCCATGAGATATTATCCAGCCATG
GTAACATCTGTCAAATCAAACAAGAGTAAGTATAATATTAACCTGCTTTA
CTGTGAAAAAAGTACAAACCTGCAAAAAAAGCTCCTCTTCTTTGCCCAAA
ATTTTCTCTATCAGCCTTCTTTTCAAAACCTTTCCACTCAAGACATTGTT
CATTTTGTTCCATACACCCCCTTATCCCCAGACCCCCTACCTGTTTATTA
GATTCCCAAGAGTAAAAACGATGAATGTAAGCCATTTTCAGTTTCCATTG
ATGTTTATGATATATCAAAATCTTtgccaaaaataaattttattcagAAA
AGAAGGAAGAAAAGAAACAGAAAGCACAAACGAGAAAGAAAACAGAATCC
CCAAAAGAGAAAAaacagaagaagaaaatgacacCAAAAGATAAAAGTAC
ACTTCCTCATAATCTTTGTACTTTCTACATAAGACGTATCAAATACATAG
TAGACAAGAATAACGTTCTTTCTAAAAATTGGTTGCAATTTTGTTCTGTC
ATCATCTAGACCAGATAGTCTCATTTCTACTTctctgataatttttgatg
acattggaaaatcaaggctcagaccCCATAAAATGTGGCCTAGCTTGGTG
TGTAAAACCCCATTTCTGTTTGACATGAGAATGTCTACTTTGACCACTGA
ATCATGGTGTCCAGAGCTGCCAACCCTTCTCCTGTAGGGAGCTCTAACTT
TGTCAACATTTTCAACACAAAAAAACTTGGATTTTTAGGACAGAACTAAA
TGCTAAAACCAATATTAATTAACTTAAAATGTGTTCTTAGATGTAATTGT
ACAGAATGACGAAGCAGCAACCATTAGCCTAAACAGCACAGATGAGGATG
CTTGTTTGGCAGCCCAAGTCGCTGctaaattaaaacaaattagaaaattC
AAAGGTACAGTTTAAATCTAAATTAAGTTGTTATAACCAAACAAGCATCA
TGTATGGCCGGTATGACATGTTTAATAATAATGGGGAAATTCAGCTTGAG
GAGTTCCCTTGATAATGTGGGGGGGTAGCGATGTTCAAATAATCTCCTTA
AACCAAATAGAATTGATGATCCAACAAGTGCTACACCAAATTATTTGTAT
TCTATTTAATCGAATGATGGGGGAGGAGGGATGAGGGTGAGGTTCATCTT
GAAAGGGGGGTTAAcacattagcaaagttctttgaaGTTCAGTGCAACAT
GCCTcaacaacacaagaaaaaagtacaTGTTTCATGGTTTCTTGTTTGTT
GCATGAGGCAGGGGGTCTAGCATTTAGTACAATGCATTATGCCTACTTGA
CtgctttttggcaaaaaagttAGTAACACCGCCACCCTTTTACACTTTGT
ACAGTTAGAACTAACATACTTTGGGGTCAAATTTACATACATCACccttg
aaaataactttttgaccatattacaaaaacaataaaatactaACTGCTAC
TGCTGCTACTACTGCTACTTCTGCTACTTCTGCTACTTCTACTAAAATAT
TATAGTTTCTCTCATTTCTCCATCTTCTAGAACAAGCTGCCCTAGCAAGA
CNACTAAAATATTATAGTGTCTCTCATTTCTCCATCTTCTAGAACAAGCT
GCCCTAGCAAGACAGCCAATGCCAGGTAATTATCTGCTATTAGTATTCAG
ATTTTTCCCATTGTAAATGGGACAATACTATTTGTTGCCAGGAAATTGGc
catttgtttttttattatccaATTCTTGCTGTCTTTATCTAAAATTTAGT
TGTTCACATCTGCTGCAACTTTAGTTAAAAGAAAACTCTGGCCACATAAG
GACACAGTTTGCAGTTCACAGGTTGCAGGTCACAGATTACAGGTTATCAA
AATACAGActataaaaatattataaaattgttattttataTGAATACATA
ACATCATAACAACACATAACATGTTTCTACAAACATGATCGTATGATCAT
ATTATGCAGATATattatgcaaaatgacaatCCAAAAAATGCGTTCAAAA
TGATATTGTtggtaatattttattttttgtaaaaattttcctTCTAAATG
GCATAGATTGCAATTGACCTATCATCGTTGACCTGGGACCTGTGTCCTGT
GACTTGCATTTCGAACCAACTGTAAAGTCCAGCTTATATTATGTTCTTAg
gtgtttttttgcaaaatgatcaaCAAACAAGCAATACATCAAGTATAGAT
GATCAACCAGCAAGCGTTTCACCAAATAGAATTGATTATCCAAAAGGTGC
TACACCAAACAGAATTAATCAACCAAAAGGTTCTACACCAAATAGAATCG
ATCATCCAACAAGCGCTACACCAAATAGAGATGATCAACCAACAAGTGCT
ACACCAAATATAGATGATCAACCAGCAAGTGCTACACCAAATATAGATGA
TCAACCAGCAAGGGTTTCACCAAATAGAATTGATTATCCAAAAGGTGCTA
CACCAAATAGAATTGATTATCCAAAAGGTGCTACACCAAACAGAATTGAT
CAACCAAAAAGTTCTACACCAAACAGAATTGATCAACCAACAACCGCTAC
ACCAACTAGAATTGATCAACCAACAAGCGCTACTCCAACTAGAATTGATC
AACCAACAAGCGCTACTCCAACTAGAATTGATCAACAAAGAAGTCCTACA
TCAAATAGAATTGATCATCCAACAAATGCCACACCAAATAGAATTGATCA
ACCAACAAGTGCTGATTCGCCAGGTAAATTGTTTTANTGCTACTCCAACT
AGAATTGATCATCCAAGAAGTCCTACATCAAATAGAATTGATCATCCAAC
AAATGCCACACCAAATAGAATTGATCAAGCAACAAGTGCTGATTCGCCAG
GtaaattgttttaaataatCTCAGTTTTAGTTTTCTGCCAGTTTCACTAA
ACTATAActtgtgaaaaagtgaaatattgccGACAAAATTAAGAGGATAA
AACCGTCAAAacctttatttttataaaatttttacaaaagatTCTTTGTT
CCATAGATAAAATATCACAATATTTCATTACTTAGAGTACCCATTTCCAG
CAAGAAAACCACAAGACAATCAAGTTGACTTCACCAAAATTCAACAAGCT
GGTAAGACAACTTATAGCAGTGTATTTTGTTCGGAAGAGCTATTATTATT
TTGCAGCATCAGTTTGGAGAActcagatacacgttttttatataagcata
tCCAGGCTTAAATCTTGCAAAAACTTAGGCATGGCCTAAGCATATGCCCC
CTGTAGGAAATTGTATGTGTTTCTTTTTCCCTCTTCAGAAGAAATAATTa
ttaaacaaaaagagaaagaCAATCTAAAAACTGCACAGGCTGCATAATCC
AAACTGAAAACCTATNAAAAGATTCTTTGTTCCATAGATAAAATATCACA
ATATTTCATTACTTAGAGTACCCATTTCCAGCAAGAAAACCACAAGACAA
TCAAGTTGACTTCACCAAAATTCAACAAGCTGGTAAGACAACTTATAGCA
GTGTATTTTGTTCGGAAGAGCTATTATTATTTTGCAGCATCAGTTTGGAG
AActcagatacacgttttttatataagcatatCCAGGCTTAAATCTTGCA
AAAACTTAGGCATGGCCTAATCATATGCCCCCTGTAGGAAATTGTATGTG
TTTCTTTTTCCCTCttcagaagaaaaaattatcaaacaaAGAGAGAAAGA
CAATCTAAAAACTGCACAGGCTGCACAATCCAAACTGAAAACCTATGAAC
TCAATAGGTAATTTTCTgcttgatattttgaaatattttttcatgttaGT
TCCCTTATATAATTAAGCTGCTTCAGAAAAGTTATTTGGtagatttggca
aaattttgagaatatTACTTTCcgtcaaaaattttgttgacatctaacaa
tttcaattttaagTTAAATTTTCCAGCCAATTGCTAAAATTGTTTTTCCt
ctgggaaaattttttaagtCATCCAATCCAGGTTATATTTCAACCAAAAT
TCTGTCATCCTTTTTATGGTTATAGAACAgttatggagaaaatttttcaa
gatCAAGTCACAAACAGGTGAATGAATAAGTTAAATATTAAACTTTTAAG
GCTCTATACAATCTTGTTTTGTTGTGATGCTGTCTAATGCACAAAAACAC
TTTGTTCTAATTTGTGTTCTAATCTTGTCATTGCAATATCGGTGATTCTA
ATATACAGCCATTGCTTTTTTAGTTTGTTAAAATTACAACTCTCCGTAAC
GTACACCCTGTTTATTAGATAATTGATACATTTTTAGTTATCAACAAGAT
CCTCATCATAGCAGTGTCCCTGGTGGTGTCACAACAAAACCATGCTCATC
AAGAAACCCGTATCTTGACTTGTTGAAGTAAGTGAAAGGTTACCCAAATT
GTACAAAGGTTACCTGGATTTGGGTCACATTTCGCTATTCTCTGATGGAT
TTGTCCAATGATATTAGGTTGTTCACTCTGTGTAATTTAATGGGATAATT
TTATAAGGAATGATCATCCTCATCCtctaaattttgagattttctggGGA
CTtaaaatttcacaaatttttaaaacagttttaaaaaatttctaaggACA
CCCTCCGGCTGTAATACTGACATTCTGACTTTGGAATATTTTCATTATCA
TGCTGCCTCTACAATGTAATGTGAATTTAGCTGTTTGACTTCTTTTTAGA
AATCCATGTTCAGAGTGCTGGAAAAAAGAATCTGATCTCTTTCATCTGAG
ACAGCAGCTAGAAGAAAGTGAgttctttgcttttttcaacTCAACagaaa
gtgcattttttgggtcaccgataaaccagttatcagacgcAAGCTCTACA
ATacagaaatattttactcgttctcgatattttcgcatattttccttgtc
taaaggctcggaaaatatgatgcaaaaaaaattggaactcGTAGAATATT
TCTTGTATTGTACTCACAACTTtctgataactattacatattttttactt
ttttaaaacgTACAACTTTGTGCTGAACCTTTTTACCTCCTTTGTCATAT
TATGCACAGTAAGTTGGTGcgctcataaaaaaaattaaatggaaaatgga
a
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024209XLOC_024209Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039972-exon-sc0002260-1491911889:12649..13005TCONS_00039972-exon-sc0002260-1491911889:12649..13005Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:12649..13005TCONS_00039972-exon-sc0002260-1510915933:12649..13005Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:12649..13005TCONS_00039972-exon-sc0002260-1575043694:12649..13005Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:15934..16073TCONS_00039972-exon-sc0002260-1491911889:15934..16073Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:15934..16073TCONS_00039972-exon-sc0002260-1510915933:15934..16073Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:15934..16073TCONS_00039972-exon-sc0002260-1575043694:15934..16073Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:16697..17702TCONS_00039972-exon-sc0002260-1491911889:16697..17702Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:16697..17702TCONS_00039972-exon-sc0002260-1510915933:16697..17702Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:16697..17702TCONS_00039972-exon-sc0002260-1575043694:16697..17702Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:18391..18423TCONS_00039972-exon-sc0002260-1491911889:18391..18423Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:18391..18423TCONS_00039972-exon-sc0002260-1510915933:18391..18423Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:18391..18423TCONS_00039972-exon-sc0002260-1575043694:18391..18423Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:18949..19521TCONS_00039972-exon-sc0002260-1491911889:18949..19521Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:18949..19521TCONS_00039972-exon-sc0002260-1510915933:18949..19521Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:18949..19521TCONS_00039972-exon-sc0002260-1575043694:18949..19521Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:19834..19899TCONS_00039972-exon-sc0002260-1491911889:19834..19899Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:19834..19899TCONS_00039972-exon-sc0002260-1510915933:19834..19899Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:19834..19899TCONS_00039972-exon-sc0002260-1575043694:19834..19899Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:20468..20555TCONS_00039972-exon-sc0002260-1491911889:20468..20555Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:20468..20555TCONS_00039972-exon-sc0002260-1510915933:20468..20555Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:20468..20555TCONS_00039972-exon-sc0002260-1575043694:20468..20555Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:20824..20865TCONS_00039972-exon-sc0002260-1491911889:20824..20865Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:20824..20865TCONS_00039972-exon-sc0002260-1510915933:20824..20865Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:20824..20865TCONS_00039972-exon-sc0002260-1575043694:20824..20865Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:21086..21175TCONS_00039972-exon-sc0002260-1491911889:21086..21175Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:21086..21175TCONS_00039972-exon-sc0002260-1510915933:21086..21175Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:21086..21175TCONS_00039972-exon-sc0002260-1575043694:21086..21175Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1491911889:21498..21899TCONS_00039972-exon-sc0002260-1491911889:21498..21899Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1510915933:21498..21899TCONS_00039972-exon-sc0002260-1510915933:21498..21899Clytia hemisphaericaexon
TCONS_00039972-exon-sc0002260-1575043694:21498..21899TCONS_00039972-exon-sc0002260-1575043694:21498..21899Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002260supercontigsc0002260:12649..21899 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.185553	0.353927	0.31509	0.216257	0.112401	0.119191	0.107338	0.0992661	0.250005	0.125477	1.09922	0.120859	0.146743	0.376017	0.19988	0.0240299	0.408691	0.131057	0.0788988	0.0432066	0	0	0	0.0386844	1.05682	0.877489	0.101743	0	0	0.205216
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039972 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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