TCONS_00039896 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039896
Unique NameTCONS_00039896
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length992

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039896 ID=TCONS_00039896|Name=TCONS_00039896|organism=Clytia hemisphaerica|type=transcript|length=992bp
aaaagacATAGATGTCCTGGATTACAGGGCTAGCCACTTAAAAAGTCGTT
GTGCacgttttcttctttttaggcAATGTTAATATCAGGTCCAAATATGG
GTGGTAAAAGCTCGTACATCAAACAGATTGCTATCTATTGCATCTTGGCG
CAAATTGGTTCATACATTGCTGCTTCTTCTGCCAGGGTTGGTGTATTAGA
TGGTATTTATACGAGAATGGGTGCAAATGACAACATCGCACATGGCAAAA
GTACTTTTTTAGTCGAAATGGAAGAAGCTTCAAGAATATTAAGGAATTCC
ACCAATAAATCGCTGGTCATCTTGGACGAGTTAGGGAGAGGAACCAGTAC
GTTTGATGGTGTGGCAATCGCTTCAGCTGCattgaaatatttcttggatg
aagttcaaccGTTCACACTTTTCGTATCGCACTATCCGTCGGTGTTCAAA
GAATTCGAAAATCATGACGCATGCGTGAATCATCACATGTCATTTATCGA
AGCAAATGATGTTGGAGTTGTTACTGATGAAGAGAGTGGCGTCAAAAAGG
AGAAAGTCGACTCTATTGTCTTTTTGTACAAGTTAGCCAATGGTGTAGCA
GGGAAAAGTTATGGTTTAAATGTTTCAAGACTTGCTGGAATCAGTGAAGA
CATCATTCAAAATGCTGCACGAAAATCTTCACAGTTTCAGGAGAAGATGT
CGAATCTAAGATCATTCAAAAACGCGATAAAGTTTGCAAAAACGAAGGAA
AGATACTTGTTGAACTCACACGAACATTAGTGTGAGACTTAATATATGGG
AGATCGTGGTGACATACTCCAAACAAGCtccaaactttattttttgatcA
GTTCTTATGTTATACATCATTTAGTACAATTTTCATCCACAAATATATAC
GTATTCTTACTAATCCAAATTGTTGAGAATGTCGAGAACGATATTGCATC
CGTCACATACGTGTTTTGTTCTAAAAATTTTAGGGGTTCAGg
Run BLAST on NCBI

protein sequence of TCONS_00039896-protein

>TCONS_00039896-protein ID=TCONS_00039896-protein|Name=TCONS_00039896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=234bp
MLISGPNMGGKSSYIKQIAIYCILAQIGSYIAASSARVGVLDGIYTRMGA
NDNIAHGKSTFLVEMEEASRILRNSTNKSLVILDELGRGTSTFDGVAIAS
AALKYFLDEVQPFTLFVSHYPSVFKEFENHDACVNHHMSFIEANDVGVVT
DEESGVKKEKVDSIVFLYKLANGVAGKSYGLNVSRLAGISEDIIQNAARK
SSQFQEKMSNLRSFKNAIKFAKTKERYLLNSHEH
Run BLAST on NCBI

transcript from alignment at sc0002233:2161..5763-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039896 ID=TCONS_00039896|Name=TCONS_00039896|organism=Clytia hemisphaerica|type=transcript|length=3603bp|location=Sequence derived from alignment at sc0002233:2161..5763- (Clytia hemisphaerica)
AAAAGACATAGATGTCCTGGATTACAGGGCTAGCCACTTAAAAAGTCGTT
GTGCACGTTTTCTTCTTTTTAGGCAATGTTAATATCAGGTCCAAATATGG
GTGGTAAAAGCTCGTACATCAAACAGATTGCTATCTATTGCATCTTGGCG
CAAATTGGTTCATACATTGCTGCTTCTTCTGCCAGGTTCGTAGCATTTTT
GGCCACTCCCAGATATTAAAAGAACCTACACTAGCTTTAGTAGAGGACTT
CTAATTAAGGCCTCGCCAAATTAAATGATTGCTACCTTGCCAAAATATAG
TTCTTTGGTAATTTCCAGAATAACCACTAATTTTCGTTTAAAACACTCAT
CTTCAGGGCAATAAAGAACAAAATCACTCTTTCATTCAAAATGAGTTTCA
ACAAAGTGGCTTATTAACGTCAAACTCAAAACTTATTAGAATCAGTTTCT
TTATTTTAATACAATATATTGTATTTGTTAACCGTTTCCTTCAACTTTGA
TTGATTTTTAGCGCTTTATCCAGGAAAAATAGCGAAATAAAGCAGAAAAA
ACAAGCGAAAAGAGATAAAAAATTGCTATAATTTCTGACGTCAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGGGCAACTCTGGACAATGTAGGCCCG
TCGTCATGCGAAAAGAACCAATTGCATTGCGCAAAAAGCCATGTAGCCCG
CTTCGAAAAAGTAACCGGTTAACAACAGTCAATAATAGACCTTTTCATAA
ATAACGTCACGAACATTGCTTGCCTCGTATTCAAACAATTACCATGGTGA
TTATGTTCCTTGAGACATTAAATGATTTTTTTATGAATAGAAAGTAATTT
TAATAAAATCCGCTGGGAGTTAATCACCAAGACAATAATTTCAAAACGAG
GCAAGTGATGTTAGTGACGTAATTTATGAAAATGTCTATACTTTATCAAA
GTGACTTTTCACTTCCGGTGCTAGACTAACTTCCAGTTTACGCTAATAAT
AAAGAACGTCTTTAACAAACTTTACCAGTTTCTAAGGATACATACTACAT
GAAACAGGGCCCCCCCAGCGGTTTGCGTGAATGCGTGAATGGGCATTTTG
GGTTGCGTGAATCCGTGAAAATTGAAAAAAAATGCGTGAATGCGTGAATT
GAAAAAACTTGCGTGAACGTGTAAATCCACTTTTTCATTGTGTGAATCAT
GCGTGAATCTGGGCTATTTAGTGCGTGAATACGTGAATTTCCCTTTTTTC
CACCGATTTTGTGCAGTTTTCCCGATTTTCCAATGCTTCCCCGATTTTTC
CCGAACATTTTTCGATTTTCTGAAAGATCGGGTTATTGCGTGAAAACTCG
GGGAAAATTTGCGTGAATGCGTGAATTTCGAAAAAAAATTGCGTGATTGC
GTGAAATGAGGGTCCGCTGGGGGGCCTCGTACAGGCTGGTACTGAGAAAA
ATTTAACTAAATTATATATCCTTACATCTGTTTGTATCAGGGTTGGTGTA
TTAGATGGTATTTATACGAGAATGGGTGCAAATGACAACATCGCACATGG
CAAAAGTACTTTTTTAGTCGAAATGGAAGAAGCTTCAAGAATATTAAGGA
ATTCCACCAATAAATCGCTGGTCATCTTGGACGAGTTAGGGAGAGGTAAA
ACCATCTTTTTGAAGGAACGCTGATTTTTTTTGTGTTCTTATAAGGGTGA
CCGACCTTCAAAAGTTTAAATTTTATTTGTTATACCTTCAACCTGGGCGG
TAATATCACCCGCACTTTCCGTTCTGCAAAAAATAAGCGAGTTGAAATCC
GTAATGGGCGTTGGAGCAATCCTTTCTGCTGCCCTGAATCATTAGTGTAG
GCTGTGAAAATTTAACCTCCTGCCCTCTTAGCTGACGTTAAGAAATATAT
TGGTAGCCGGCGACCCCCTTGTAAATATATATTTTTCGTGGACTTTTTAT
CCCCAAAATTATGTAAGGAGTGGTTAGCCATAATAAAATATCGCCAAACA
TTTGACACCACTTGTTTCTATGTCTTTATCCAATATCCTATGTTAAGAAG
GAAAAACCAAAGTCAAATCCTTTATTATCTCACTTGAATTCTTTTCCGTT
TCTTTTTTAATGGAAACATTGTTTTTTCGTTCATCTTGCCAGGAACCAGT
ACGTTTGATGGTGTGGCAATCGCTTCAGCTGCATTGAAATATTTCTTGGA
TGAAGTTCAACCGTTCACACTTTTCGTATCGCACTATCCGTCGGTGTTCA
AAGAATTCGAAAATCATGACGCATGCGTGAATCATCACATGTCATTTATC
GAAGCAAATGATGTTGGAGTTGTTACTGATGAAGAGAGTGGCGTCAAAAA
GGAGAAAGTCGACTCTATTGTCTTTTTGTACAAGGTGAGACTATTTGGTA
TCACGATTACACACTTTTCTATGAAAACAACTTTATAAGAAAATGCGATG
CCTGATTTCGGCTGAAACTTGAGAACAATCCCAGAAACGGCTACGAAAAG
GCTGTACTCAAGCCCCAAGAATAGAATAAGCATATTAAGAACAATATGAA
CATTTAATCCCGAAAAAAAGAAATGCTAAGCTTGTAGAATCTGTCCCTGT
TTTACTTTATTCAGCCCTTTAGCGAATTGATTTGAAGTTTTACTACTGGG
CACCTTTCCATCATTAAAAGGCATTGTTAACTTAAAGGACCACAAAACTG
TTTCGAGTTAGAGAGACATTCGAGTTGTAGAGGTTTGAACTAAAGAGACT
CTTTTTGTTTTAGTTAGCCAATGGTGTAGCAGGGAAAAGTTATGGTTTAA
ATGTTTCAAGACTTGCTGGAATCAGTGAAGACATCATTCAAAATGCTGCA
CGAAAATCTTCACAGTTTCAGGAGAAGATGTCGAATCTAAGGTCAGTGTT
ACTTTAAAAACATTTATGCCTATGAATAAGTCCTAAATATCTCATAATGG
GGCCCCAGTGGTTTGCGTGAATGCGTGAATGGGCTTTTTCACTTGCGTGA
ATGCGTGAACTGGAAAGCTTTGCGTGAAAAATTTTTTTAAAAAATTGTTA
TATCCCCCAGAGAGCCCATTACTGGCATGTCCACATGAAATGTCGACTAT
TTAACCACTGGTCGATATTTTAGCTGCAGAATTTGAATATAACCGTTGAA
AATTATATTTTCTTTCTACAGATCATTCAAAAACGCGATAAAGTTTGCAA
AAACGAAGGAAAGATACTTGTTGAACTCACACGAACATTAGTGTGAGACT
TAATATATGGGAGATCGTGGTGACATACTCCAAACAAGCTCCAAACTTTA
TTTTTTGATCAGTTCTTATGTTATACATCATTTAGTACAATTTTCATCCA
CAAATATATACGTATTCTTACTAATCCAAATTGTTGAGAATGTCGAGAAC
GATATTGCATCCGTCACATACGTGTTTTGTTCTAAAAATTTTAGGGGTTC
AGG

Coding sequence (CDS) from alignment at sc0002233:2161..5763-

>TCONS_00039896 ID=TCONS_00039896|Name=TCONS_00039896|organism=Clytia hemisphaerica|type=CDS|length=3525bp|location=Sequence derived from alignment at sc0002233:2161..5763- (Clytia hemisphaerica)
ATCATTCAAAAACGCGATAAAGTTTGCAAAAACGAAGGAAAGATACTTGT
TGAACTCACACGAACATTAGTTAGCCAATGGTGTAGCAGGGAAAAGTTAT
GGTTTAAATGTTTCAAGACTTGCTGGAATCAGTGAAGACATCATTCAAAA
TGCTGCACGAAAATCTTCACAGTTTCAGGAGAAGATGTCGAATCTAAGGA
ACCAGTACGTTTGATGGTGTGGCAATCGCTTCAGCTGCATTGAAATATTT
CTTGGATGAAGTTCAACCGTTCACACTTTTCGTATCGCACTATCCGTCGG
TGTTCAAAGAATTCGAAAATCATGACGCATGCGTGAATCATCACATGTCA
TTTATCGAAGCAAATGATGTTGGAGTTGTTACTGATGAAGAGAGTGGCGT
CAAAAAGGAGAAAGTCGACTCTATTGTCTTTTTGTACAAGGGTTGGTGTA
TTAGATGGTATTTATACGAGAATGGGTGCAAATGACAACATCGCACATGG
CAAAAGTACTTTTTTAGTCGAAATGGAAGAAGCTTCAAGAATATTAAGGA
ATTCCACCAATAAATCGCTGGTCATCTTGGACGAGTTAGGGAGAGATGTT
AATATCAGGTCCAAATATGGGTGGTAAAAGCTCGTACATCAAACAGATTG
CTATCTATTGCATCTTGGCGCAAATTGGTTCATACATTGCTGCTTCTTCT
GCCAGATCATTCAAAAACGCGATAAAGTTTGCAAAAACGAAGGAAAGATA
CTTGTTGAACTCACACGAACATTAGTTAGCCAATGGTGTAGCAGGGAAAA
GTTATGGTTTAAATGTTTCAAGACTTGCTGGAATCAGTGAAGACATCATT
CAAAATGCTGCACGAAAATCTTCACAGTTTCAGGAGAAGATGTCGAATCT
AAGGAACCAGTACGTTTGATGGTGTGGCAATCGCTTCAGCTGCATTGAAA
TATTTCTTGGATGAAGTTCAACCGTTCACACTTTTCGTATCGCACTATCC
GTCGGTGTTCAAAGAATTCGAAAATCATGACGCATGCGTGAATCATCACA
TGTCATTTATCGAAGCAAATGATGTTGGAGTTGTTACTGATGAAGAGAGT
GGCGTCAAAAAGGAGAAAGTCGACTCTATTGTCTTTTTGTACAAGGGTTG
GTGTATTAGATGGTATTTATACGAGAATGGGTGCAAATGACAACATCGCA
CATGGCAAAAGTACTTTTTTAGTCGAAATGGAAGAAGCTTCAAGAATATT
AAGGAATTCCACCAATAAATCGCTGGTCATCTTGGACGAGTTAGGGAGAG
ATGTTAATATCAGGTCCAAATATGGGTGGTAAAAGCTCGTACATCAAACA
GATTGCTATCTATTGCATCTTGGCGCAAATTGGTTCATACATTGCTGCTT
CTTCTGCCAGATCATTCAAAAACGCGATAAAGTTTGCAAAAACGAAGGAA
AGATACTTGTTGAACTCACACGAACATTAGTTAGCCAATGGTGTAGCAGG
GAAAAGTTATGGTTTAAATGTTTCAAGACTTGCTGGAATCAGTGAAGACA
TCATTCAAAATGCTGCACGAAAATCTTCACAGTTTCAGGAGAAGATGTCG
AATCTAAGGAACCAGTACGTTTGATGGTGTGGCAATCGCTTCAGCTGCAT
TGAAATATTTCTTGGATGAAGTTCAACCGTTCACACTTTTCGTATCGCAC
TATCCGTCGGTGTTCAAAGAATTCGAAAATCATGACGCATGCGTGAATCA
TCACATGTCATTTATCGAAGCAAATGATGTTGGAGTTGTTACTGATGAAG
AGAGTGGCGTCAAAAAGGAGAAAGTCGACTCTATTGTCTTTTTGTACAAG
GGTTGGTGTATTAGATGGTATTTATACGAGAATGGGTGCAAATGACAACA
TCGCACATGGCAAAAGTACTTTTTTAGTCGAAATGGAAGAAGCTTCAAGA
ATATTAAGGAATTCCACCAATAAATCGCTGGTCATCTTGGACGAGTTAGG
GAGAGATGTTAATATCAGGTCCAAATATGGGTGGTAAAAGCTCGTACATC
AAACAGATTGCTATCTATTGCATCTTGGCGCAAATTGGTTCATACATTGC
TGCTTCTTCTGCCAGATCATTCAAAAACGCGATAAAGTTTGCAAAAACGA
AGGAAAGATACTTGTTGAACTCACACGAACATTAGTTAGCCAATGGTGTA
GCAGGGAAAAGTTATGGTTTAAATGTTTCAAGACTTGCTGGAATCAGTGA
AGACATCATTCAAAATGCTGCACGAAAATCTTCACAGTTTCAGGAGAAGA
TGTCGAATCTAAGGAACCAGTACGTTTGATGGTGTGGCAATCGCTTCAGC
TGCATTGAAATATTTCTTGGATGAAGTTCAACCGTTCACACTTTTCGTAT
CGCACTATCCGTCGGTGTTCAAAGAATTCGAAAATCATGACGCATGCGTG
AATCATCACATGTCATTTATCGAAGCAAATGATGTTGGAGTTGTTACTGA
TGAAGAGAGTGGCGTCAAAAAGGAGAAAGTCGACTCTATTGTCTTTTTGT
ACAAGGGTTGGTGTATTAGATGGTATTTATACGAGAATGGGTGCAAATGA
CAACATCGCACATGGCAAAAGTACTTTTTTAGTCGAAATGGAAGAAGCTT
CAAGAATATTAAGGAATTCCACCAATAAATCGCTGGTCATCTTGGACGAG
TTAGGGAGAGATGTTAATATCAGGTCCAAATATGGGTGGTAAAAGCTCGT
ACATCAAACAGATTGCTATCTATTGCATCTTGGCGCAAATTGGTTCATAC
ATTGCTGCTTCTTCTGCCAGATCATTCAAAAACGCGATAAAGTTTGCAAA
AACGAAGGAAAGATACTTGTTGAACTCACACGAACATTAGTTAGCCAATG
GTGTAGCAGGGAAAAGTTATGGTTTAAATGTTTCAAGACTTGCTGGAATC
AGTGAAGACATCATTCAAAATGCTGCACGAAAATCTTCACAGTTTCAGGA
GAAGATGTCGAATCTAAGGAACCAGTACGTTTGATGGTGTGGCAATCGCT
TCAGCTGCATTGAAATATTTCTTGGATGAAGTTCAACCGTTCACACTTTT
CGTATCGCACTATCCGTCGGTGTTCAAAGAATTCGAAAATCATGACGCAT
GCGTGAATCATCACATGTCATTTATCGAAGCAAATGATGTTGGAGTTGTT
ACTGATGAAGAGAGTGGCGTCAAAAAGGAGAAAGTCGACTCTATTGTCTT
TTTGTACAAGGGTTGGTGTATTAGATGGTATTTATACGAGAATGGGTGCA
AATGACAACATCGCACATGGCAAAAGTACTTTTTTAGTCGAAATGGAAGA
AGCTTCAAGAATATTAAGGAATTCCACCAATAAATCGCTGGTCATCTTGG
ACGAGTTAGGGAGAGATGTTAATATCAGGTCCAAATATGGGTGGTAAAAG
CTCGTACATCAAACAGATTGCTATCTATTGCATCTTGGCGCAAATTGGTT
CATACATTGCTGCTTCTTCTGCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024148XLOC_024148Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039896-exon-sc0002233-1575043694:5579..5763TCONS_00039896-exon-sc0002233-1575043694:5579..5763Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1575043694:3969..4123TCONS_00039896-exon-sc0002233-1575043694:3969..4123Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1575043694:3230..3471TCONS_00039896-exon-sc0002233-1575043694:3230..3471Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1575043694:2723..2850TCONS_00039896-exon-sc0002233-1575043694:2723..2850Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1575043694:2161..2442TCONS_00039896-exon-sc0002233-1575043694:2161..2442Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1510915933:5579..5763TCONS_00039896-exon-sc0002233-1510915933:5579..5763Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1510915933:3969..4123TCONS_00039896-exon-sc0002233-1510915933:3969..4123Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1510915933:3230..3471TCONS_00039896-exon-sc0002233-1510915933:3230..3471Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1510915933:2723..2850TCONS_00039896-exon-sc0002233-1510915933:2723..2850Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1510915933:2161..2442TCONS_00039896-exon-sc0002233-1510915933:2161..2442Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1491911889:5579..5763TCONS_00039896-exon-sc0002233-1491911889:5579..5763Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1491911889:3969..4123TCONS_00039896-exon-sc0002233-1491911889:3969..4123Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1491911889:3230..3471TCONS_00039896-exon-sc0002233-1491911889:3230..3471Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1491911889:2723..2850TCONS_00039896-exon-sc0002233-1491911889:2723..2850Clytia hemisphaericaexon
TCONS_00039896-exon-sc0002233-1491911889:2161..2442TCONS_00039896-exon-sc0002233-1491911889:2161..2442Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039896-proteinTCONS_00039896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002233supercontigsc0002233:2161..5763 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.3569	13.9623	7.43884	6.17353	3.54398	1.97966	3.08742	3.81751	4.35273	3.87814	5.00366	3.22886	3.40517	4.66292	3.78209	6.26762	3.67352	5.61299	2.45644	2.11687	3.24181	3.65395	16.1569	12.3274	9.04841	8.59649	1.36684	1.52503	9.15289	11.4261
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000432DNA_mismatch_repair_MutS_C
IPR027417P-loop_NTPase
Vocabulary: Biological Process
TermDefinition
GO:0006298mismatch repair
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO:0030983mismatched DNA binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006298 mismatch repair
molecular_function GO:0005524 ATP binding
molecular_function GO:0030983 mismatched DNA binding
Blast
[Close]
BLAST of TCONS_00039896 vs. Swiss-Prot (Human)
Match: MSH3 (DNA mismatch repair protein Msh3 OS=Homo sapiens GN=MSH3 PE=1 SV=4)

HSP 1 Score: 220.705 bits (561), Expect = 5.998e-64
Identity = 104/206 (50.49%), Postives = 152/206 (73.79%), Query Frame = 1 
Query:   76 MLISGPNMGGKSSYIKQIAIYCILAQIGSYIAASSARVGVLDGIYTRMGANDNIAHGKSTFLVEMEEASRILRNSTNKSLVILDELGRGTSTFDGVAIASAALKYFLDEVQPFTLFVSHYPSVFKEFENHDACV-NHHMSFIEANDVGVVTDEESGVKKEKVDSIVFLYKLANGVAGKSYGLNVSRLAGISEDIIQNAARKSSQFQ 690
            M+I+GPNMGGKSSYIKQ+A+  I+AQIGSY+ A  A +G++DGI+TRMGA DNI  G+STF+ E+ + + I+R +T++SLVILDELGRGTST DG+AIA A L+YF+ +V+  TLFV+HYP V +  +N+   V N+HM F+ + D   +   + G  ++  D + FLY++  G+A +SYGLNV++LA +  +I++ AA KS + +
Sbjct:  892 MIITGPNMGGKSSYIKQVALITIMAQIGSYVPAEEATIGIVDGIFTRMGAADNIYKGQSTFMEELTDTAEIIRKATSQSLVILDELGRGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDESKL---DPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELE 1094
The following BLAST results are available for this feature:
BLAST of TCONS_00039896 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSH35.998e-6450.49DNA mismatch repair protein Msh3 OS=Homo sapiens G... [more]
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