XLOC_024148 (gene) - C. hemisphaerica

Overview
NameXLOC_024148
Unique NameXLOC_024148
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002233:2161..5763-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_024148 ID=XLOC_024148|Name=XLOC_024148|organism=Clytia hemisphaerica|type=gene|length=3603bp|location=Sequence derived from alignment at sc0002233:2161..5763- (Clytia hemisphaerica)
AAAAGACATAGATGTCCTGGATTACAGGGCTAGCCACTTAAAAAGTCGTT
GTGCACGTTTTCTTCTTTTTAGGCAATGTTAATATCAGGTCCAAATATGG
GTGGTAAAAGCTCGTACATCAAACAGATTGCTATCTATTGCATCTTGGCG
CAAATTGGTTCATACATTGCTGCTTCTTCTGCCAGGTTCGTAGCATTTTT
GGCCACTCCCAGATATTAAAAGAACCTACACTAGCTTTAGTAGAGGACTT
CTAATTAAGGCCTCGCCAAATTAAATGATTGCTACCTTGCCAAAATATAG
TTCTTTGGTAATTTCCAGAATAACCACTAATTTTCGTTTAAAACACTCAT
CTTCAGGGCAATAAAGAACAAAATCACTCTTTCATTCAAAATGAGTTTCA
ACAAAGTGGCTTATTAACGTCAAACTCAAAACTTATTAGAATCAGTTTCT
TTATTTTAATACAATATATTGTATTTGTTAACCGTTTCCTTCAACTTTGA
TTGATTTTTAGCGCTTTATCCAGGAAAAATAGCGAAATAAAGCAGAAAAA
ACAAGCGAAAAGAGATAAAAAATTGCTATAATTTCTGACGTCAANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNCGGGCAACTCTGGACAATGTAGGCCCG
TCGTCATGCGAAAAGAACCAATTGCATTGCGCAAAAAGCCATGTAGCCCG
CTTCGAAAAAGTAACCGGTTAACAACAGTCAATAATAGACCTTTTCATAA
ATAACGTCACGAACATTGCTTGCCTCGTATTCAAACAATTACCATGGTGA
TTATGTTCCTTGAGACATTAAATGATTTTTTTATGAATAGAAAGTAATTT
TAATAAAATCCGCTGGGAGTTAATCACCAAGACAATAATTTCAAAACGAG
GCAAGTGATGTTAGTGACGTAATTTATGAAAATGTCTATACTTTATCAAA
GTGACTTTTCACTTCCGGTGCTAGACTAACTTCCAGTTTACGCTAATAAT
AAAGAACGTCTTTAACAAACTTTACCAGTTTCTAAGGATACATACTACAT
GAAACAGGGCCCCCCCAGCGGTTTGCGTGAATGCGTGAATGGGCATTTTG
GGTTGCGTGAATCCGTGAAAATTGAAAAAAAATGCGTGAATGCGTGAATT
GAAAAAACTTGCGTGAACGTGTAAATCCACTTTTTCATTGTGTGAATCAT
GCGTGAATCTGGGCTATTTAGTGCGTGAATACGTGAATTTCCCTTTTTTC
CACCGATTTTGTGCAGTTTTCCCGATTTTCCAATGCTTCCCCGATTTTTC
CCGAACATTTTTCGATTTTCTGAAAGATCGGGTTATTGCGTGAAAACTCG
GGGAAAATTTGCGTGAATGCGTGAATTTCGAAAAAAAATTGCGTGATTGC
GTGAAATGAGGGTCCGCTGGGGGGCCTCGTACAGGCTGGTACTGAGAAAA
ATTTAACTAAATTATATATCCTTACATCTGTTTGTATCAGGGTTGGTGTA
TTAGATGGTATTTATACGAGAATGGGTGCAAATGACAACATCGCACATGG
CAAAAGTACTTTTTTAGTCGAAATGGAAGAAGCTTCAAGAATATTAAGGA
ATTCCACCAATAAATCGCTGGTCATCTTGGACGAGTTAGGGAGAGGTAAA
ACCATCTTTTTGAAGGAACGCTGATTTTTTTTGTGTTCTTATAAGGGTGA
CCGACCTTCAAAAGTTTAAATTTTATTTGTTATACCTTCAACCTGGGCGG
TAATATCACCCGCACTTTCCGTTCTGCAAAAAATAAGCGAGTTGAAATCC
GTAATGGGCGTTGGAGCAATCCTTTCTGCTGCCCTGAATCATTAGTGTAG
GCTGTGAAAATTTAACCTCCTGCCCTCTTAGCTGACGTTAAGAAATATAT
TGGTAGCCGGCGACCCCCTTGTAAATATATATTTTTCGTGGACTTTTTAT
CCCCAAAATTATGTAAGGAGTGGTTAGCCATAATAAAATATCGCCAAACA
TTTGACACCACTTGTTTCTATGTCTTTATCCAATATCCTATGTTAAGAAG
GAAAAACCAAAGTCAAATCCTTTATTATCTCACTTGAATTCTTTTCCGTT
TCTTTTTTAATGGAAACATTGTTTTTTCGTTCATCTTGCCAGGAACCAGT
ACGTTTGATGGTGTGGCAATCGCTTCAGCTGCATTGAAATATTTCTTGGA
TGAAGTTCAACCGTTCACACTTTTCGTATCGCACTATCCGTCGGTGTTCA
AAGAATTCGAAAATCATGACGCATGCGTGAATCATCACATGTCATTTATC
GAAGCAAATGATGTTGGAGTTGTTACTGATGAAGAGAGTGGCGTCAAAAA
GGAGAAAGTCGACTCTATTGTCTTTTTGTACAAGGTGAGACTATTTGGTA
TCACGATTACACACTTTTCTATGAAAACAACTTTATAAGAAAATGCGATG
CCTGATTTCGGCTGAAACTTGAGAACAATCCCAGAAACGGCTACGAAAAG
GCTGTACTCAAGCCCCAAGAATAGAATAAGCATATTAAGAACAATATGAA
CATTTAATCCCGAAAAAAAGAAATGCTAAGCTTGTAGAATCTGTCCCTGT
TTTACTTTATTCAGCCCTTTAGCGAATTGATTTGAAGTTTTACTACTGGG
CACCTTTCCATCATTAAAAGGCATTGTTAACTTAAAGGACCACAAAACTG
TTTCGAGTTAGAGAGACATTCGAGTTGTAGAGGTTTGAACTAAAGAGACT
CTTTTTGTTTTAGTTAGCCAATGGTGTAGCAGGGAAAAGTTATGGTTTAA
ATGTTTCAAGACTTGCTGGAATCAGTGAAGACATCATTCAAAATGCTGCA
CGAAAATCTTCACAGTTTCAGGAGAAGATGTCGAATCTAAGGTCAGTGTT
ACTTTAAAAACATTTATGCCTATGAATAAGTCCTAAATATCTCATAATGG
GGCCCCAGTGGTTTGCGTGAATGCGTGAATGGGCTTTTTCACTTGCGTGA
ATGCGTGAACTGGAAAGCTTTGCGTGAAAAATTTTTTTAAAAAATTGTTA
TATCCCCCAGAGAGCCCATTACTGGCATGTCCACATGAAATGTCGACTAT
TTAACCACTGGTCGATATTTTAGCTGCAGAATTTGAATATAACCGTTGAA
AATTATATTTTCTTTCTACAGATCATTCAAAAACGCGATAAAGTTTGCAA
AAACGAAGGAAAGATACTTGTTGAACTCACACGAACATTAGTGTGAGACT
TAATATATGGGAGATCGTGGTGACATACTCCAAACAAGCTCCAAACTTTA
TTTTTTGATCAGTTCTTATGTTATACATCATTTAGTACAATTTTCATCCA
CAAATATATACGTATTCTTACTAATCCAAATTGTTGAGAATGTCGAGAAC
GATATTGCATCCGTCACATACGTGTTTTGTTCTAAAAATTTTAGGGGTTC
AGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039896TCONS_00039896Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039896-proteinTCONS_00039896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002233supercontigsc0002233:2161..5763 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
16.36	13.96	7.44	6.17	3.54	1.98	3.09	3.82	4.35	3.88	5	3.23	3.41	4.66	3.78	6.27	3.67	5.61	2.46	2.12	3.24	3.65	16.16	12.33	9.05	8.6	1.37	1.53	9.15	11.43