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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039888 ID=TCONS_00039888|Name=TCONS_00039888|organism=Clytia hemisphaerica|type=transcript|length=5955bp
ATATATATTCTGATTTATtatcattttcttgtttttgaatGTCCATGTTT
GAAGTAGGtatttttcttctgaaaacttGCACAAAGGTGTAGGTAATTGA
TTGAAATGCTCAAAATGTGAATGGGCCCAATCtttgaaaagtaaattttc
aaGTCGGGACTGTCGTTGTTGTACTTATTATGTaccaaaaaagtataaat
tatgTACCAGAAAAGTATAACAGTTTTTGTGACTTTCTCAAGATACGTAA
GCATGATTTTTCCTGATTCTTTGATGTGTActgtaatacacctttcccgt
aattcagaTTTTGCCGGGAAACACGTGTGCTCCACCGTTGACGACCCTGG
ACGACCCCCGGAAATTTCTGGGGTGTTCCGGGGGCGACGTATCTAACCTA
CCTTCACCCCCAGAAAACTGGATTCTGGGGGTTTCCGGGGTGATCCGGGG
GAGATCATCCTAAgccttaaaaaattgtttgtttccggtccacagGTGGG
CGAAACTTTCCTCACTCGGGCGGccgggattttttttttttttttgcaaa
atttaaatCATTTATGTTTTTCATTCGACAATGAGGCTTCAAATCCCCTT
ATTATTTATTGACTTTAAAACCAACAAAATTGgttataaagtttttaaag
cTTATTTTCGAACATTTATATCATTCAGGAATAGCGAAAATCAGATGATA
CATAGTATCatcataataataaaaaaaatcataaaaagccgGCCGGGTga
cttgtaaaaaaaatttcaccccGCCGCAGACCGGAAACAAACGTTTTTTT
TAGGGTGGCCTTGCTGAACTTGAACTTAAAATCCCTCTTGGGAGGCTCAT
CATCGCAGAACCCCATCATCGGCTTGTGGGCTTGTGTCAGTTTAAGATGA
AGGGAAAGTGAATTCTATTTTTTTTTATTAACATTGCTGCCATTTTGAAT
CCTTTTTTGTATTTTTTCGTAAAGGCCTTTCCACATCTTAGGAAACTCGA
ATTTTGCTTCATGTAGACTAGACTTGAATAAGGCTTAATGAGGATTGTGA
TCGATTCCGGATGTGAATTTTATAAAAATCAGCATGAATATTCAGTTTTT
CATGCTCTTTCCAATGGTATAGACAAGAGAGCGTTCTTTTATCTAGTTTG
GGAAATATTCCCACCATATCCTAAACAGGAAGTATAAAACAAAAGAATTT
CAGAATTCTTACTTGAACAAGGTATACGCCTTGTTTAAGATATTGCTCCT
GTCTGATTGTGCGCCAAATTAAATTCCCGCCAAATTTTATTTTTATTTTA
ATATATATACCGTTGATAAAGGGTGTTTTTGTTGTATTTCTGCCATTTAA
AGCTTAAAAAATTGGTTGTTAGCTTCCTAACAACTATCAGTTTTACAGAG
ATTTGGTGGTGAATTTGACAATTTATAAAAATTGTTGAATTTCCAAGGGA
TTATTGCCACAAAATGGGAGAGAAGCAAAGTGTGCACCCCCACCCTGGTA
GGGGTGGTTTTGTTGATTTTGGTTGTAAATATTGTGCTTGGAGTTTGGAA
ATTTTGGATTTCAGGTGGGGGATAGAGGCTATGCTGGGGGCTTATTCGTT
TAGGTGGGATTTGGAGTCTTTCACACATCTTCTATTGATTCATTCAAAAA
AGTAGCGCCTCCGGCGCCATTTCTTAACAAAATATGAAGAATAACACTTT
TCTTATCAAATGTTACTATTGTCATGCTTCAAGATTACTAAGTTATGGGT
CGGGTACCTCTAATATAATACTGTTTAAAGGTGGGACCCTGATTTTGGCC
CGGACAATTTTCCAACCTGGTAAGGTAAAGAGGTGGGTCCTTATCTCAGA
TATTTCAGGTGGGGAAATTAGATAGTGCTGGGACTGAAAATTTTAGGTGG
GACCTGGAACACCCTTGCACACTATGAGAAGGTTGATTAGAAAGTGGAAT
AGCAACACATTTTCCAAACTGTAATAAGTGCTAAAATACCTGATCACATT
TAATTAAAATGTTAATTTTTTAGAGTTTTAATAAATAATAAACAAACATG
GAAGAGAGTATGAATGAGGTTGTTCGATTCTTAAAAAGGAGACAAATGAG
TGAAGTAACAATATCAAACTTCAAAAAAGAGAAGATGGACGAAACAGCGA
TAAACCAAGCAGCCGATGAAGTTTTATCAAACATGGGTATTCGAGCAAGA
GGTGACTTGCTTGCATTAAGAGCCTTTTGTTTGCCTAAAATGGTTGAAGA
TAATGAAGAAAAACTTTACCAGGAAGTTAAAAGAGGTCAAGGATCAACAA
AAAAGACAAAATCAAAAAGAGAAAGGTCAATCAGCATAGGCTGGATACAT
TATGATAGGAAGGCAGGGCGGTATGCTGGTGTCCGATCCAAACGTGGAGG
AGGTTTACGATCAGTGAAAATGCATGATTCATCTACAAGGCAAGATATAT
TAGGAGAAGCCGAAAAGATCTTCTTTCCAAAGGGAAAATCACAAGTTGGT
CAGCTTGCTCTAATGATAACCTTATTGGGCAAATTCGATGAAACTCCATT
GCCATCTACCATTGAAGTTGATGGGAAAGAAGTTCAATTTAGTTTGGGTG
GTTACCTGCAAGAAAATCGTTTGACAAAGGCTAAGTTTTATCTCATGACT
AAATCCTTATCCTTTCTGGATAAGGTTAATGAACTATCGTCAGACGATGA
TTTTGATTTGCCTCCTGCTCCAATGAATAATTCATTGTCACCAAAAGAAA
CAGACGAAAATACAGTCCCATTACAAACATTGCAACAGAATAATCAGGAC
AGCTTACTTATTGGATCAACCCAATCAAGGACACAACTTCAAAATGAGAT
TGAAAAAGCATTTAAAGAAAGTGAATATGCTGATAAAAGAAAAGCCGATG
TGAAAAAACACCAAGCTGAAGAAAATGAACGTCTAGCTGAAGAGAAAAAA
CGCCAAGCTGATGAAAACGAACGTCTAGCAGAAACGCGAAAACAAGAACA
AGAAAACTTACGTCAATCCAGGCTTTCTCGTGTAAAAGCAGAACCAAATC
TATCGGAAGACCACACTGTGATTTCGGTGAGGCATCCAAAGCTTGGGACT
CGTCGAAGAGTGTTTCNTCTCGTGTAAAAGCAGAACCAAATCTATCGGAA
GACCACACTGTGATTTCGGTGAGGCATCCAAAGCTTGGGACTCGTCGAAG
AGTGTTTCTTGACAAGGATAACTTTTCGTGTGTTTATGACTGGGTTGGAT
CCCTGGATATTgttcctaaatattttcaactgatCCACCCTTCCGGGCAG
CTTTTGCAACCTTGGAAAACTGTCTCTGCTTTTGGGAAAGTAGTGTTAAA
TATGGAAGCATGTGATAACGCTTTAGAACTTGAACCAGAAGGAGAAGTTG
CTTTATCTGGATTTAGTGTCCAAGAAGATCTGTTTGCGTATGCTGACGAA
GAGATTGCAGACATAAATCAAAGACTACCGGTAAATGATATCGAAGAAGA
AACAATAGATTGCCAGTGTGATATAGTTGAATACCTGAAAAAACAGCAAA
CTACCGAGCATGGCGATGTCAATGCAACACTTGTGGCACACAGAAGACCA
AAATCCTTTTGGAATGTCTTTTTCAAACAGAACGTTGATCTTAAACGGCC
TTTTCGAGTCATTTGGGCCGGAGAAACATCTAGTGATGACGGAGGCCCGT
TCCGAGAGTTTTTATTACGATGTATGGAACAATTTCAACTTTTAAATTCA
TACTTTTTCGGTGAAAAATATAAGCTTTTGTTTACTGCTTTGACTGACGC
TGTCATAAAAAAACATTACTTTGTTCTGGGTCAATTGAGTGCATTATCAA
TACTGCATATCGGAAGAGGACCCCAATGCTTACACCCTGGTATTGTTGAT
CGGATTCTACGTTCGCCAAACCCTGTACTGTTAGATGATATCCAGAACGG
GGAATATGAAGCAAATGTCACATCGATCAAAAATGGCGAAACAGATTCCC
TCTTAGATGCTGGCATCATGCCCTCAAAAGATCGATCGAAAGATTTACAG
GACTATTGTGAATATTTTTGTGTCATCTCCAAAGCTGCAGCAATTGAACA
ATTCCGTGAAGGCTTTCGATCAATCGACGGGGAGCTTCTAAAGAAGAATT
GTTGCCTGAGGAAATTTTTCATTTCAGAAGAAATCGTTGTTGGTTTAGAT
AGTGTACGTCAAGTGTTGCAATACCACTGTGGGTTGGAAGGATCCAATAT
ATATGAAGCCAAACAAGATTCCATTGTCGAATTTGAATTATTTCTCGTAA
AGCTTGCATCTGGTGGCTGCAAAGGTCTCTCACTGAAAGACTTTTTAGTG
TTTGCAATGGCGCTTGATAGAATACCAGTCTTTGGATTGCCAAAAATGTT
TGAAGTATATTTCGAAGAGGGGAAAAAAATGCCAATTACTTCAACTTGTG
GACTGTTTATTACAATCTTTATGGACAATATGTCATATAACTTGGAATAC
GCCATTCGTGAATGCGTCGGTTATGGACTAGTGTGATATACACAAATAGA
ATTTACTTTAAAAGAAGAAACTCCCTGAGGCCACCCTAAAAAAAAACGTG
TTTTTCCGGTCCGCGGCCGGGTGAAATTTTTTTACGAGTCACCCGGCCGG
TTTTTTATTATTATGATGATATTATGTATCATTTGATTTTCGTAATTCCT
GAATGATATAAATGTTCAAAAATAAGCTTTAAAACTTATAACCAATTCTG
TTGGTTTTAAAGTCAATAATAAGGGGATTTGAGGCCTCAACATTGTCGAA
AGAAAAACTTAAATGACTTGAATTTTGCAAAAAAAATGTGGTGAAGAAAA
TTTTGTCCACCTGCGGACCGGAAACAAACATTTTTTTAAGGATGGCCTTA
GGAATCCTCGTGAATGCTTTCACCGCCAATTATTTTGTTATGGACTTGAG
TACTATGTTTTGGTGTCATCATTCAGTCCTAAAAACTTTTTTTGTTTTGT
TATACTATCTGAATTATCTTAATTTTCGCGCGTCCCTTAAAAACGTGCTT
TTGCGCACCCTTGAATTTTTATCAAAAACTTATTAATTTCTGGGGTTCTT
TTCGGGTAAGTGACAATATTAACAATATCGTCTAAGTCCAAGAAAGTTTA
GAATTTGAGCTATACTACCTACGGTCGAGTCTGTTTTTAAAAGTTTAAAT
TCATTTAAGATTTTGCATTCCAGAAACATATTTTCCATGAATTAAAACCC
TAGAACAATATAAGTAAAGGCTTATTTTTACCCCTTAAAGAATTGagcga
aaattgaaagaaattgagGAATTTGgttaaatttgaaatcttttgtttCC
AAATCTTGAGAATCCTTTTTTTTAGTTAAGACTCTGGTTAACTATCGCGT
GCCTTTGTTGGATACACGGggtatgtttatgtttatttacCGTTGATATT
CTTagcttttatttatttatttagatttttttcttcttttgtttccaAAT
CTTGAGAATCCTTTTTCTCTTTTAGTTAAGACTCTGGTTAACTATCGCGT
GCCTTTGTTGGATACACGGGGTATGTTTATGTTTAATTACCGTTGATATT
CTTagcttttatttatttatttagatttttttcttcttttgtttcgaCAA
AATATGTAATTTAATTCcgcacaaaaaaatcataattcgAAAAATGACTA
TCAAGATTTATCTTACATAAATGATGGTACATACCTTACCGCAGAAAATA
ATGTCGGACGTCGTACAGAATTTTCGTCACCTCCAAAatattttgtcact
ttttttccggcattttttgTCCGATAAGGTAGTGCATATATATGCTTTGT
GAATTTCGATAAatcttttttgtcttcaattgtATTGACATGCGTTCCGT
GTAAATATTGGGTGTTTATAATCCAGAAAAACGAcaatttatttcatatt
tttaa Run BLAST on NCBI protein sequence of TCONS_00039888-protein >TCONS_00039888-protein ID=TCONS_00039888-protein|Name=TCONS_00039888-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MEACDNALELEPEGEVALSGFSVQEDLFAYADEEIADINQRLPVNDIEEE
TIDCQCDIVEYLKKQQTTEHGDVNATLVAHRRPKSFWNVFFKQNVDLKRP
FRVIWAGETSSDDGGPFREFLLRCMEQFQLLNSYFFGEKYKLLFTALTDA
VIKKHYFVLGQLSALSILHIGRGPQCLHPGIVDRILRSPNPVLLDDIQNG
EYEANVTSIKNGETDSLLDAGIMPSKDRSKDLQDYCEYFCVISKAAAIEQ
FREGFRSIDGELLKKNCCLRKFFISEEIVVGLDSVRQVLQYHCGLEGSNI
YEAKQDSIVEFELFLVKLASGGCKGLSLKDFLVFAMALDRIPVFGLPKMF
EVYFEEGKKMPITSTCGLFITIFMDNMSYNLEYAIRECVGYGLV Run BLAST on NCBI transcript from alignment at sc0002231:19749..30200- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039888 ID=TCONS_00039888|Name=TCONS_00039888|organism=Clytia hemisphaerica|type=transcript|length=10452bp|location=Sequence derived from alignment at sc0002231:19749..30200- (Clytia hemisphaerica)
ATATATATTCTGATTTATTATCATTTTCTTGTTTTTGAATGTCCATGTTT
GAAGTAGGTATTTTTCTTCTGAAAACTTGCACAAAGGTGTAGGTAATTGA
TTGAAATGCTCAAAATGTGAATGGGCCCAATCTTTGAAAAGTAAATTTTC
AAGTCGGGACTGTCGTTGTTGTACTTATTATGTACCAAAAAAGTATAAAT
TATGTACCAGAAAAGTATAACAGTTTTTGTGACTTTCTCAAGATACGTAA
GCATGATTTTTCCTGATTCTTTGATGTGTACTGTAATACACCTTTCCCGT
AATTCAGATTTTGCCGGGAAACACGTGTGCTCCACCGTTGACGACCCTGG
ACGACCCCCGGAAATTTCTGGGGTGTTCCGGGGGCGACGTATCTAACCTA
CCTTCACCCCCAGAAAACTGGATTCTGGGGGTTTCCGGGGTGATCCGGGG
GAGATCATCCTAAGCCTTAAAAAATTGTTTGTTTCCGGTCCACAGGTGGG
CGAAACTTTCCTCACTCGGGCGGCCGGGATTTTTTTTTTTTTTTTGCAAA
ATTTAAATCATTTATGTTTTTCATTCGACAATGAGGCTTCAAATCCCCTT
ATTATTTATTGACTTTAAAACCAACAAAATTGGTTATAAAGTTTTTAAAG
CTTATTTTCGAACATTTATATCATTCAGGAATAGCGAAAATCAGATGATA
CATAGTATCATCATAATAATAAAAAAAATCATAAAAAGCCGGCCGGGTGA
CTTGTAAAAAAAATTTCACCCCGCCGCAGACCGGAAACAAACGTTTTTTT
TAGGGTGGCCTTGCTGAACTTGAACTTAAAATCCCTCTTGGGAGGCTCAT
CATCGCAGAACCCCATCATCGGCTTGTGGGCTTGTGTCAGTTTAAGATGA
AGGGAAAGTGAATTCTATTTTTTTTTATTAACATTGCTGCCATTTTGAAT
CCTTTTTTGTATTTTTTCGTAAAGGCCTTTCCACATCTTAGGAAACTCGA
ATTTTGCTTCATGTAGACTAGACTTGAATAAGGCTTAATGAGGATTGTGA
TCGATTCCGGATGTGAATTTTATAAAAATCAGCATGAATATTCAGTTTTT
CATGCTCTTTCCAATGGTATAGACAAGAGAGCGTTCTTTTATCTAGTTTG
GGAAATATTCCCACCATATCCTAAACAGGAAGTATAAAACAAAAGAATTT
CAGAATTCTTACTTGAACAAGGTATACGCCTTGTTTAAGATATTGCTCCT
GTCTGATTGTGCGCCAAATTAAATTCCCGCCAAATTTTATTTTTATTTTA
ATATATATACCGTTGATAAAGGGTGTTTTTGTTGTATTTCTGCCATTTAA
AGCTTAAAAAATTGGTTGTTAGCTTCCTAACAACTATCAGTTTTACAGAG
ATTTGGTGGTGAATTTGACAATTTATAAAAATTGTTGAATTTCCAAGGGA
TTATTGCCACAAAATGGGAGAGAAGCAAAGTGTGCACCCCCACCCTGGTA
GGGGTGGTTTTGTTGATTTTGGTTGTAAATATTGTGCTTGGAGTTTGGAA
ATTTTGGATTTCAGGTGGGGGATAGAGGCTATGCTGGGGGCTTATTCGTT
TAGGTGGGATTTGGAGTCTTTCACACATCTTCTATTGATTCATTCAAAAA
AGTAGCGCCTCCGGCGCCATTTCTTAACAAAATATGAAGAATAACACTTT
TCTTATCAAATGTTACTATTGTCATGCTTCAAGATTACTAAGTTATGGGT
CGGGTACCTCTAATATAATACTGTTTAAAGGTGGGACCCTGATTTTGGCC
CGGACAATTTTCCAACCTGGTAAGGTAAAGAGGTGGGTCCTTATCTCAGA
TATTTCAGGTGGGGAAATTAGATAGTGCTGGGACTGAAAATTTTAGGTGG
GACCTGGAACACCCTTGCACACTATGAGAAGGTTGATTAGAAAGTGGAAT
AGCAACACATTTTCCAAACTGTAATAAGTGCTAAAATACCTGATCACATT
TAATTAAAATGTTAATTTTTTAGAGTTTTAATAAATAATAAACAAACATG
GAAGAGAGTATGAATGAGGTAAGAAATAATTTTAGTCCTCTCCCTATCTC
TCTTTGAATATAACATTTCTTCAAATATAAAAATAATGGAAGCTTTTTCA
AAGATTTTCCAACAAGTACTTTTCATTTTAATAATATATTTTGTATATAC
CGTTGAAAATATACTCAGGAACACTACTTTTTTCACAGAAAATAATTTTT
GTTATTTATGAAAATGATATATTTGATAACAATTAGAAGAAAATGGACAT
CTTAAATCTCTCCAAAAGTATGTAAACACTTTACATGTTAAAACAATATC
TTGACACACAGGCATCACCAATTTAAAAGATATACACCCTTGGAACTATA
ATTTGAAGCAGATTCTTTTGAGAGTTTTCAAAAAGAGTTTTAAGCCCCTC
AAAGTAGGCCTAAAACGACCAAAAATGGGAAAAGTAGGTCTTCTTTGAGA
GGCTATAACTTTTATCAACAAGAAAAGTTTCATTTTTTCAATTTATGAAT
TATTTTGAATTTTGAAAGTAAGCTTCTTTTAATGATCTTTCCAACAGTTA
ATAACTTTTAAATGTGATGCTTGTGTGTCAAGATGTTGTTAAAAATGTAA
AGCGTCCACATAATTTTGGGATAGACCTTAAAATATGATGATTTCAAATA
TATTTGATTTTGTGGCAGATTTTACACTTTCAAATATTTGGACGTTCTGG
GCTTCAACATGTAAAACATTCCCCATATATGACAAAAGTAATTATTTGGA
ATCATATTCTAGTCAGGTCAAGCAGTTAGTATCACACATTGTTTAATAAT
TCAAACATCTTTCAGGTTGTTCGATTCTTAAAAAGGAGACAAATGAGTGA
AGTAACAATATCAAACTTCAAAAAAGAGAAGGTAAGTTTTGTATTTTTTA
TTTTGCTACCAACAGCCAGGGAAAACCTGGACAACGAAGAGTTAAATAAT
TTGTAAATTGTCTCCCCTGATTAACCTCATTCTCCAATACAGCCCCCAAA
ACCCTGGGTTCAGCTGGGTCCATACATGTCAATATTATGGCTCGACTTAT
TAAAATTCAGTGTATATTTAAAAAATCCACAGAAGTTTGTGGGGATAAAT
TACTTCATTTCAATGTTTTTAATAATTTTAAATATGAAATAGCTAGAATG
TAATATGCTTTCAACTTCAGTTGAGCTAGAATCTTAAAATGTCTGTCTGT
GAGTCTGTCTGTCTGTCCGTGTACAAAACTTTGGGGCAGGGTGAATGCTT
CATAGATTGTCGGATTTGGATGAAATTTGGTACACTTTGGTATTTTGGGG
TGTTTTTTTTTCATTTTTTCAAAAATTTCATGTTCTCACAATCAGCCAAA
ATGACTGTAAATCTTTGGGTTACAATTTTATGAAATCTGAGAAAAATCTT
TTTTATTTTTCAAATTTTTGATTAACCCTACTTGGACCGGGCTTTTGTCG
GGTATGTAAAGGACCGGGTGGGGGCAAAAATTGCCCCCCCCTCAGAACTC
CAGATAGAATTGTCCTTTTTGAATGAAATTTGGCACAGAGAATCCCCATC
ACCAATAAAACAAAATGGCAAAAAAAAGTTTTCGAAAAGTCACGTGATGA
CGTCACATCAAAATTTGGACCAAAAAGACTTATCGCCTTGCCCGAAAAAT
CGACCCCTCAAACCAAGAGGATTTTGGGGAAAAAAATTATGCAGTCTCAT
TNTTGCCCGAAAAATCGACCCCTCAAACCAAGAGGATTTTGGGGAAAAAA
ATTATGCAGTCTCATTGTATATCTAAATACGAATTACTGTGCAATATTTC
AGGTCAATTTGACCATAGGTTCAATTTATATGGCCGTTTGGAAATCCAAA
ATGAGACCGCTGCGGCTGCGGTGGGAAAAGTTTTTGGCTGATTTTTTTTT
ATTTTGGTGTAGAATAGAATTTCAGAAATTGTCATAAAAATTCAGGGCCC
TAAACCCATGTCTCAAAATGCACCGGGGGAAAAAGTGACAGGGGGGGGCA
ATTTTTGCCCCCACCCCCCAGGCCAAGTAGGGTAAGTATAATCGTTGTTA
AACTTTTTATGAATGCTGATGTTTTATGACATCGTTAGAATATCCCTAAC
TTTATCTCTGCGAATTTGGTATATTTATGCTTTCCTTAAAAGTTACTGCA
CGTTGACAGTAGTTATGTAATGAATGGTATACATTAATATGTGGTTTTCC
TTTTTCAGATGGACGAAACAGCGATAAACCAAGCAGCCGATGAAGTTTTA
TCAAACATGGGTATTCGAGCAAGAGGTGACTTGCTTGCATTAAGAGCCTT
TTGTTTGCCTAAAATGGTTGAAGATAATGAAGAAAAACTTTACCAGGAAG
TTAAAAGAGGTCAAGGATCAACAAAAAAGACAAAATCAAAAAGAGAAAGG
TCAATCAGCATAGGCTGGATACATTATGATAGGAAGGCAGGGCGGTATGC
TGGTGTCCGATCCAAACGTGGAGGAGGTTTACGATCAGTGAAAATGCATG
ATTCATCTACAAGGCAAGATATATTAGGAGAAGCCGAAAAGATCTTCTTT
CCAAAGGGAAAATCACAAGTTGGTCAGCTTGCTCTAATGATAACCTTATT
GGGCAAATTCGATGAAACTCCATTGCCATCTACCATTGAAGTTGATGGGA
AAGAAGTTCAATTTAGTTTGGGTGGTTACCTGCAAGAAAATCGTTTGACA
AAGGCTAAGTTTTATCTCATGACTAAATCCTTATCCTTTCTGGATAAGGT
TAATGAACTATCGTCAGACGATGATTTTGATTTGCCTCCTGCTCCAATGA
ATAATTCATTGTCACCAAAAGAAACAGACGAAAATACAGTCCCATTACAA
ACATTGCAACAGAATAATCAGGTTAGCTAATTTTCTTTCCTTTTAAGTAC
CAGTGAATATTTCAAAAGCACATTCAATGTTGTGGTGAAGGGTGATTTTC
CAGGGGTATATACGTACTTTTTTGAAGAGAGGGGTATAAAAGCTCTTTGA
CCACTTTTCACACTTTGACCTGGACAGCCTGGGGGTACTTGATCTGAAAG
CCATTGAATGTTCAGAATAAAATTTGGCTTTAAAAATCAAACCCTTAAAG
TGCAGACCCTTTCAGTTTATAGTTGACAAAGTTTGTTGCTTGTTAGATAT
AAACAACTTTCAATTTTCTGCAAGAATTACTCATTTTCTTACCCTTATTA
AAGTACAGCAAAGGTCCTTGATCAGTTCTACACATGCAGCTAAGGTAGCT
TACCTTGAGTGCCTTCAAACTATTATATCTTTTGAAATGAGCTATTTTTT
CGTAAACAGCCCCCAAAATTTAAAAATTTAGGTTTTAATTTTTTGATTCT
TTTTAATTTTTCTTACCCCCCCCCCAAAAAAAAAAATATGAGAAGAAGAA
TAGCTTAGGGAATGAGTTTTTTTCTCAATTTAAGTTGAGCTGGATCTGAC
AATGTCAATCTGTCTACTTGTTAGGTGCACATAAATCCTTGGGGGAGTCT
GGAGAGGCCAAAAATAGTTTGAAAACTGGGCTGGGTACACTATTATTTTT
CTTTTTTTGAAAATTTTTATTTGGTCTGTTTTGGGAGACTGGGTTGCCCC
CTTGCCTAAATTTGACCACAGATAAATAAGTCATTCATTGCTGCTGCTTT
GAATTGTTACTATCCCTCTTTGTGACTTTATGTGACAATAAAATAAATGT
GATAAAACCATGTAAGTCGCAGTAATGTCATCAACACTGCATTATCTTTT
TATATCCAGGAAATCAAGATTTAGTCATAGTTTCCTCTCCCCCTCCCTTT
CTGCAGGGGGGGGGATTTTTTTCCCTAAATTTTCAAAAAGAGGGAGGGGA
AGGAAAAAATTGAAATCCTGGGGGGGGATTTCCTATATGGGCGAAGTTTT
TTTGCGGGGGGGGGGAGGATTTTTCTATTTTGCAAATTTGTGGAAAAATA
AGATGCCAGTTTATGACTGATTTTTAGCTAGTATTTATAGATAAGGTTAA
TACAACTTTGATCAAGACTACTTAAAATCTCTTGTCATAAAGCTTTTAAA
TAATATTTTGGAAAAAGTCCTCTTCAGTAAGAGCGTGAGTCAAGGGTCAA
TATGAAAAATTGTGGGGGCCGAAAAAAAGGGGGGAGGTAAGATTTTAGCA
CATTTTGGGGGGATTCCACAAAAGGGAGGGGGGAAACATTTTTTTTATTT
CCAGGGGGGGATTTGTTGATCGGGCAATCGATTTTCTCAGGGGGGGAACT
GACCCAGGAGGAAACTATGTTTAGCCTTTTGGAGGCAAAAACGTCTAAAA
CAAAACTATTTAGAATTTGCTTTGAAGTCTTCTGGTTTGCTCGTACTGGT
CTAGTAAGCCATGATCTTCAAACCTAAAATATACCCATATACTCGGAATT
CATAAACTTTTCTTTTACTTATTTTTAGGACAGCTTACTTATTGGATCAA
CCCAATCAAGGACACAACTTCAAAATGAGATTGAAAAAGCATTTAAAGAA
AGTGAATATGCTGATAAAAGAAAAGCCGATGTGAAAAAACACCAAGCTGA
AGAAAATGAACGTCTAGCTGAAGAGAAAAAACGCCAAGCTGATGAAAACG
AACGTCTAGCAGAAACGCGAAAACAAGAACAAGAAAACTTACGTCAATCC
AGGCTTTCTCGTGTAAAAGCAGAACCAAATCTATCGGAAGACCACACTGT
GATTTCGGTGAGGCATCCAAAGCTTGGGACTCGTCGAAGAGTGTTTCNTC
TCGTGTAAAAGCAGAACCAAATCTATCGGAAGACCACACTGTGATTTCGG
TGAGGCATCCAAAGCTTGGGACTCGTCGAAGAGTGTTTCTTGACAAGGAT
AACTTTTCGTGTGTTTATGACTGGGTTGGATCCCTGGATATTGTTCCTAA
ATATTTTCAACTGATCCACCCTTCCGGGCAGCTTTTGCAACCTTGGAAAA
CTGTCTCTGCTTTTGGGAAAGTAGTGTTAAATATGGAAGCATGTGATAAC
GCTTTAGAACTTGAACCAGAAGGAGAAGTTGCTTTATCTGGATTTAGTGT
CCAAGAAGATCTGTTTGCGTATGCTGACGAAGAGATTGCAGACATAAATC
AAAGACTACCGGTAAATGATATCGAAGAAGAAACAATAGATTGCCAGTGT
GATATAGTTGAATACCTGAAAAAACAGCAAACTACCGAGCATGGCGATGT
CAATGCAACACTTGTGGCACACAGAAGACCAAAATCCTTTTGGAATGTCT
TTTTCAAACAGAACGTTGATCTTAAACGGCCTTTTCGAGTCATTTGGGCC
GGAGAAACATCTAGTGATGACGGAGGCCCGTTCCGAGAGTTTTTATTACG
ATGTATGGAACAATTTCAACTTTTAAATTCATACTTTTTCGGTGAAAAAT
ATAAGCTTTTGTTTACTGCTTTGACTGACGCTGTCATAAAAAAACATTAC
TTTGTTCTGGGTCAATTGAGTGCATTATCAATACTGCATATCGGAAGAGG
ACCCCAATGCTTACACCCTGGTATTGTTGATCGGATTCTACGTTCGCCAA
ACCCTGTACTGTTAGATGATATCCAGAACGGGGAATATGAAGCAAATGTC
ACATCGATCAAAAATGGCGAAACAGATTCCCTCTTAGATGCTGGCATCAT
GCCCTCAAAAGATCGATCGAAAGATTTACAGGACTATTGTGAATATTTTT
GTGTCATCTCCAAAGCTGCAGCAATTGAACAATTCCGTGAAGGTATGCTA
CGTATATTTCATTTTAAGTTTAAATTTCGAAAATTTTCTACGTAATTTGA
AAGGGCACAGGGAAGTTCTCAGACTTCCTCGTAATAATAATAACAAATAT
TTTATGTGGCATGCTTCGAAAAATTTAACAGCTTTTAGGCAGCTGAGGAA
TTGTTTCCACGAAGGGCCACAAACAGAACAGACAGACCTCTTACACAGCA
AATGAAAATTATATGTCTTCGTTTTAGAAATTAAGTTTCTTTGCTTTTTC
ACACAATTCTTTAATTTTTTGCAGTTCGTTGTTTGTGAAATCCTCTATAA
ATAAGCCAATTTCTCTGTTAGGCAAGATTGTTACCTTAGCAACAGTACTT
AAACGTTTTTAGCTTTTTTGGCCATTTTTAGGTCTTTTAAAGTCTGAATT
TAAAGCTGTTTATTTATATTTAAAAAGTTATGAATTCCTTTTCGACTTTT
AGCCCAAATTTGCATAAAAGGCAGAAAACAAAGGTTTTTAAGAATGTCTT
ATACAGTGGATTAAGTAAAGATCACTTTCTTAACTCGCAAGTACCTTATA
AGGAAAGAAATTTTCAGAGAAAAATTTTTCGCAGAATTTGGGTGTCATTC
GCAGATAGTAAATTTTGGATTTTAGAAAATTACGCCTAAAAATTAACTTT
TTGAGCCATTAATTAGCAAAGGGTAAATTTACACGAGCAAATGATTAACG
GGATTTTATTAACACGAAATTTTCTGGTCGTGTTAATAACATGTCTAGTT
ATATTCGTGTAATAAAGTTGGCTATTTTTTAGTATTTACAGTTTTTTTGT
GAATTTAGGCTTTCGATCAATCGACGGGGAGCTTCTAAAGAAGAATTGTT
GCCTGAGGAAATTTTTCATTTCAGAAGAAATCGTTGTTGGTTTAGATAGT
GTACGTCAAGTGTTGCAATACCACTGTGGGTTGGAAGGATCCAATATATA
TGAAGCCAAACAAGATTCCATTGTCGAATTTGAATTATTTCTCGTAAAGC
TTGCATCTGGTGGCTGCAAAGGTCTCTCACTGAAAGACTTTTTAGTGTTT
GCAATGGCGCTTGATAGAATACCAGTCTTTGGATTGCCAAAAATGTTTGA
AGTATATTTCGAAGAGGGGAAAAAAATGCCAATTACTTCAACTTGTGGAC
TGTTTATTACAATCTTTATGGACAATATGTCATATAACTTGGAATACGCC
ATTCGTGAATGCGTCGGTTATGGACTAGTGTGATATACACAAATAGAATT
TACTTTAAAAGAAGAAACTCCCTGAGGCCACCCTAAAAAAAAACGTGTTT
TTCCGGTCCGCGGCCGGGTGAAATTTTTTTACGAGTCACCCGGCCGGTTT
TTTATTATTATGATGATATTATGTATCATTTGATTTTCGTAATTCCTGAA
TGATATAAATGTTCAAAAATAAGCTTTAAAACTTATAACCAATTCTGTTG
GTTTTAAAGTCAATAATAAGGGGATTTGAGGCCTCAACATTGTCGAAAGA
AAAACTTAAATGACTTGAATTTTGCAAAAAAAATGTGGTGAAGAAAATTT
TGTCCACCTGCGGACCGGAAACAAACATTTTTTTAAGGATGGCCTTAGGA
ATCCTCGTGAATGCTTTCACCGCCAATTATTTTGTTATGGACTTGAGTAC
TATGTTTTGGTGTCATCATTCAGTCCTAAAAACTTTTTTTGTTTTGTTAT
ACTATCTGAATTATCTTAATTTTCGCGCGTCCCTTAAAAACGTGCTTTTG
CGCACCCTTGAATTTTTATCAAAAACTTATTAATTTCTGGGGTTCTTTTC
GGGTAAGTGACAATATTAACAATATCGTCTAAGTCCAAGAAAGTTTAGAA
TTTGAGCTATACTACCTACGGTCGAGTCTGTTTTTAAAAGTTTAAATTCA
TTTAAGATTTTGCATTCCAGAAACATATTTTCCATGAATTAAAACCCTAG
AACAATATAAGTAAAGGCTTATTTTTACCCCTTAAAGAATTGAGCGAAAA
TTGAAAGAAATTGAGGAATTTGGTTAAATTTGAAATCTTTTGTTTCCAAA
TCTTGAGAATCCTTTTTTTTAGTTAAGACTCTGGTTAACTATCGCGTGCC
TTTGTTGGATACACGGGGTATGTTTATGTTTATTTACCGTTGATATTCTT
AGCTTTTATTTATTTATTTAGATTTTTTTCTTCTTTTGTTTCCAAATCTT
GAGAATCCTTTTTCTCTTTTAGTTAAGACTCTGGTTAACTATCGCGTGCC
TTTGTTGGATACACGGGGTATGTTTATGTTTAATTACCGTTGATATTCTT
AGCTTTTATTTATTTATTTAGATTTTTTTCTTCTTTTGTTTCGACAAAAT
ATGTAATTTAATTCCGCACAAAAAAATCATAATTCGAAAAATGACTATCA
AGATTTATCTTACATAAATGATGGTACATACCTTACCGCAGAAAATAATG
TCGGACGTCGTACAGAATTTTCGTCACCTCCAAAATATTTTGTCACTTTT
TTTCCGGCATTTTTTGTCCGATAAGGTAGTGCATATATATGCTTTGTGAA
TTTCGATAAATCTTTTTTGTCTTCAATTGTATTGACATGCGTTCCGTGTA
AATATTGGGTGTTTATAATCCAGAAAAACGACAATTTATTTCATATTTTT
AA Coding sequence (CDS) from alignment at sc0002231:19749..30200- >TCONS_00039888 ID=TCONS_00039888|Name=TCONS_00039888|organism=Clytia hemisphaerica|type=CDS|length=2370bp|location=Sequence derived from alignment at sc0002231:19749..30200- (Clytia hemisphaerica)
GCTTTCGATCAATCGACGGGGAGCTTCTAAAGAAGAATTGTTGCCTGAGG
AAATTTTTCATTTCAGAAGAAATCGTTGTTGGTTTAGATAGTGTACGTCA
AGTGTTGCAATACCACTGTGGGTTGGAAGGATCCAATATATATGAAGCCA
AACAAGATTCCATTGTCGAATTTGAATTATTTCTCGTAAAGCTTGCATCT
GGTGGCTGCAAAGGTCTCTCACTGAAAGACTTTTTAGTGTTTGCAATGGC
GCTTGATAGAATACCAGTCTTTGGATTGCCAAAAATGTTTGAAGTATATT
TCGAAGAGGGGAAAAAAATGCCAATTACTTCAACTTGTGGACTGTTTATT
ACAATCTTTATGGACAATATGTCATATAACTTGGAATACGCCATTCGTGA
ATGCGTCGGTTATGGACTAGTGTGAATGGAAGCATGTGATAACGCTTTAG
AACTTGAACCAGAAGGAGAAGTTGCTTTATCTGGATTTAGTGTCCAAGAA
GATCTGTTTGCGTATGCTGACGAAGAGATTGCAGACATAAATCAAAGACT
ACCGGTAAATGATATCGAAGAAGAAACAATAGATTGCCAGTGTGATATAG
TTGAATACCTGAAAAAACAGCAAACTACCGAGCATGGCGATGTCAATGCA
ACACTTGTGGCACACAGAAGACCAAAATCCTTTTGGAATGTCTTTTTCAA
ACAGAACGTTGATCTTAAACGGCCTTTTCGAGTCATTTGGGCCGGAGAAA
CATCTAGTGATGACGGAGGCCCGTTCCGAGAGTTTTTATTACGATGTATG
GAACAATTTCAACTTTTAAATTCATACTTTTTCGGTGAAAAATATAAGCT
TTTGTTTACTGCTTTGACTGACGCTGTCATAAAAAAACATTACTTTGTTC
TGGGTCAATTGAGTGCATTATCAATACTGCATATCGGAAGAGGACCCCAA
TGCTTACACCCTGGTATTGTTGATCGGATTCTACGTTCGCCAAACCCTGT
ACTGTTAGATGATATCCAGAACGGGGAATATGAAGCAAATGTCACATCGA
TCAAAAATGGCGAAACAGATTCCCTCTTAGATGCTGGCATCATGCCCTCA
AAAGATCGATCGAAAGATTTACAGGACTATTGTGAATATTTTTGTGTCAT
CTCCAAAGCTGCAGCAATTGAACAATTCCGTGAAGGCTTTCGATCAATCG
ACGGGGAGCTTCTAAAGAAGAATTGTTGCCTGAGGAAATTTTTCATTTCA
GAAGAAATCGTTGTTGGTTTAGATAGTGTACGTCAAGTGTTGCAATACCA
CTGTGGGTTGGAAGGATCCAATATATATGAAGCCAAACAAGATTCCATTG
TCGAATTTGAATTATTTCTCGTAAAGCTTGCATCTGGTGGCTGCAAAGGT
CTCTCACTGAAAGACTTTTTAGTGTTTGCAATGGCGCTTGATAGAATACC
AGTCTTTGGATTGCCAAAAATGTTTGAAGTATATTTCGAAGAGGGGAAAA
AAATGCCAATTACTTCAACTTGTGGACTGTTTATTACAATCTTTATGGAC
AATATGTCATATAACTTGGAATACGCCATTCGTGAATGCGTCGGTTATGG
ACTAGTGTGAATGGAAGCATGTGATAACGCTTTAGAACTTGAACCAGAAG
GAGAAGTTGCTTTATCTGGATTTAGTGTCCAAGAAGATCTGTTTGCGTAT
GCTGACGAAGAGATTGCAGACATAAATCAAAGACTACCGGTAAATGATAT
CGAAGAAGAAACAATAGATTGCCAGTGTGATATAGTTGAATACCTGAAAA
AACAGCAAACTACCGAGCATGGCGATGTCAATGCAACACTTGTGGCACAC
AGAAGACCAAAATCCTTTTGGAATGTCTTTTTCAAACAGAACGTTGATCT
TAAACGGCCTTTTCGAGTCATTTGGGCCGGAGAAACATCTAGTGATGACG
GAGGCCCGTTCCGAGAGTTTTTATTACGATGTATGGAACAATTTCAACTT
TTAAATTCATACTTTTTCGGTGAAAAATATAAGCTTTTGTTTACTGCTTT
GACTGACGCTGTCATAAAAAAACATTACTTTGTTCTGGGTCAATTGAGTG
CATTATCAATACTGCATATCGGAAGAGGACCCCAATGCTTACACCCTGGT
ATTGTTGATCGGATTCTACGTTCGCCAAACCCTGTACTGTTAGATGATAT
CCAGAACGGGGAATATGAAGCAAATGTCACATCGATCAAAAATGGCGAAA
CAGATTCCCTCTTAGATGCTGGCATCATGCCCTCAAAAGATCGATCGAAA
GATTTACAGGACTATTGTGAATATTTTTGTGTCATCTCCAAAGCTGCAGC
AATTGAACAATTCCGTGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039888-exon-sc0002231-1575043694:28133..30200 | TCONS_00039888-exon-sc0002231-1575043694:28133..30200 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1575043694:27270..27335 | TCONS_00039888-exon-sc0002231-1575043694:27270..27335 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1575043694:25280..25942 | TCONS_00039888-exon-sc0002231-1575043694:25280..25942 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1575043694:22409..23722 | TCONS_00039888-exon-sc0002231-1575043694:22409..23722 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1575043694:19749..21592 | TCONS_00039888-exon-sc0002231-1575043694:19749..21592 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1510915933:28133..30200 | TCONS_00039888-exon-sc0002231-1510915933:28133..30200 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1510915933:27270..27335 | TCONS_00039888-exon-sc0002231-1510915933:27270..27335 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1510915933:25280..25942 | TCONS_00039888-exon-sc0002231-1510915933:25280..25942 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1510915933:22409..23722 | TCONS_00039888-exon-sc0002231-1510915933:22409..23722 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1510915933:19749..21592 | TCONS_00039888-exon-sc0002231-1510915933:19749..21592 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1491911889:28133..30200 | TCONS_00039888-exon-sc0002231-1491911889:28133..30200 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1491911889:27270..27335 | TCONS_00039888-exon-sc0002231-1491911889:27270..27335 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1491911889:25280..25942 | TCONS_00039888-exon-sc0002231-1491911889:25280..25942 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1491911889:22409..23722 | TCONS_00039888-exon-sc0002231-1491911889:22409..23722 | Clytia hemisphaerica | exon |
| TCONS_00039888-exon-sc0002231-1491911889:19749..21592 | TCONS_00039888-exon-sc0002231-1491911889:19749..21592 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002231 | supercontig | sc0002231:19749..30200 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR000569 | HECT_dom |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004842 | ubiquitin-protein transferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0004842 |
ubiquitin-protein transferase activity |
Blast
The following BLAST results are available for this feature:
|
