TCONS_00039888-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00039888-protein
Unique NameTCONS_00039888-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length394

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00039888-protein ID=TCONS_00039888-protein|Name=TCONS_00039888-protein|organism=Clytia hemisphaerica|type=polypeptide|length=394bp
MEACDNALELEPEGEVALSGFSVQEDLFAYADEEIADINQRLPVNDIEEE
TIDCQCDIVEYLKKQQTTEHGDVNATLVAHRRPKSFWNVFFKQNVDLKRP
FRVIWAGETSSDDGGPFREFLLRCMEQFQLLNSYFFGEKYKLLFTALTDA
VIKKHYFVLGQLSALSILHIGRGPQCLHPGIVDRILRSPNPVLLDDIQNG
EYEANVTSIKNGETDSLLDAGIMPSKDRSKDLQDYCEYFCVISKAAAIEQ
FREGFRSIDGELLKKNCCLRKFFISEEIVVGLDSVRQVLQYHCGLEGSNI
YEAKQDSIVEFELFLVKLASGGCKGLSLKDFLVFAMALDRIPVFGLPKMF
EVYFEEGKKMPITSTCGLFITIFMDNMSYNLEYAIRECVGYGLV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_024141XLOC_024141Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00039888TCONS_00039888Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000569HECT domainSMARTSM00119hect_3coord: 91..394
e-value: 0.0025
score: -134.6
IPR000569HECT domainPFAMPF00632HECTcoord: 232..393
e-value: 3.2E-5
score: 23.4
IPR000569HECT domainSUPERFAMILY56204Hect, E3 ligase catalytic domaincoord: 86..388
NoneNo IPR availableGENE3D3.30.2410.10coord: 228..394
e-value: 5.1E-4
score: 19.7
NoneNo IPR availableGENE3D3.90.1750.10coord: 76..215
e-value: 1.3E-8
score: 34.0

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039888-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top