TCONS_00039863 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039863
Unique NameTCONS_00039863
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3517

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039863 ID=TCONS_00039863|Name=TCONS_00039863|organism=Clytia hemisphaerica|type=transcript|length=3517bp
TTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAAAGAAAGT
TGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGGACTACTT
ATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTTGAAAAAT
GAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCTCAAAAGA
GGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGATTCAAAAA
GGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATGGGATACC
TTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATGAAATGCT
ACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAATTGTGTAT
GGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATGTGCTGTT
AAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAAATGATGA
TGGGTTTCACgaatttcaagtcaattatGAGCTGAAAAGCAAACATACAA
GCCAATGTCTGTATGCCAAGCCTAGATTATTGACAGTAATTTCAGAAACA
GGACTACATCATCAGTGCTCTATCTATTTTTGTGAATGTGAAAGTGATTT
GGAAACACTACTTCGTCTTGACTTGTGGCCTGTGACTCCAATCAAACCAA
ATACGGTGGTGTCTATAGATCTCCTACACCTTTTCATCTCGTTGCAGTTG
GAGGGGAAGAtatcttttcattctttttgtgaTGGTCTAGCGTGGAAAAA
AGGAATGGGAAACACTGTCTTGagaaGATATCTAAATCGTTTGGAGAAGA
CTGACACTATCGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAACCTC
AGAAGCATTTGTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTGTCC
CAAAGAAGACGGCAGTGTGTTCTATTGTTTAGATGCAAACTTTGGTCTAG
TACTCAAAGCGTCTGCTTCCAAATCAAAGAAACTTGCGATGCGATCTTCC
AATTTATTTGTTCCTGATGAAGATATCGATTCATTCATGGTGAACTATGA
TGATGCTTTAAAAACAAAGgctGGGATATGCTGTGTATTTACTTGACCGT
TTGTTGGAAGAAAATCATGACAAAAGTTTACTCACTCACGTTATATATGA
CATAGCCTGTGTATTAAAATCGCATTTGAAGaaaaagaacacGTTTACGA
AGTACAAAGATTTCCACTTTGGAATACCAGTTTTTCACTCATATGGTCAC
AGAGGGGATTGTCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGG
TTTGATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGT
TTTCAAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTC
AGTGATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGGAA
ATATCTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTG
AGTCGGAGATTAAAGCGATATGCTCTAAACTGACTGAAGTTAAAGTGGAT
GAGAAAGTCATTGAAGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAA
GGACAAAAGGCCACTGCAACCAGATATACAACCGATCTGTATTTTGAGGA
CATCTAGGCAACTATTGACAAAAGCATTGACGatgcTGCCGACTGGAGAC
AAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCA
CTGATGAGTGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAA
ACGCATCGAATCAAGTTTAAATACATTTGAAAAAGAGCATATGATTGCTA
AACGATGGCTTCCAGCTTCTCAAGAATTTAGACTTCAACATATGAAATAT
CTAaagcaaaaatcaaaagaaaccatCTCAACTTTGTATAGCCGATGCTC
TGAGAGAATGATGCTTTTAGTACTGAAGAGACGATATGCAGATGGATCGG
CCATTGCCACAAGACTATCCAAACAGATCAACAGAGTTTGCAAGGAAATA
AAGGATTTGACGGCTTCTTTCAACAACATTAATACTGAAATATCACTGGA
TTTTAAGACCGTTAGCTACATAGAAGTATTAGACGTTAAGTCCCCCATCT
ATAATGATACCActctttttttcaaaGTAAAATGTTCTTCAGTTCCATAC
ACGGTCATCAAATCTCTTGTTCAATATCATATGCGGAAACAACGAGCACA
AGAAGAAATATCGCTTGTTGAGCGTGAGATGGAAGTCACAGTCTCTTATT
GGGAAAAACAACTTTGTTTGCTTACTGCCTGTTTGGGGCGTCAAACTTTA
AAAGGCATCAAATATTTGCTAACCGAAAGAATACGTGCCATTGAACTTTT
CATTTATGAGTtgaaaaagtctttttcaacTGTCGTAGCTAACCCTTCAT
TTGACATCAAGAATAACCAAGTTTCCCATGAAATGCCAGATGAGGATGAA
TATTTCAGTGACTTTTCTGATTCAAGCTATTCAGGAATTGATAGTGAAGA
GAATGAGGAAGTTgacctttatttttgaaattatataagATACAACAATC
ACGATACGGTTTCGGTTTAAAGAATCTCGAAGATTTTTACGTGCTTGAAA
TTTTTAGCTGCACTTGATCCACCTGCTTTtcctcaaaaaaaaatcataaa
attcgatttttgagattttcgtCACGGATCCTAACGAATATTTTAATCAG
ATTCATTTTCGCGAGTTTGAACTTCATTcttaataagcagatattcaata
ggtaaaagttggttattgagatttattaacccgaggtgatgaaTATTCAA
CGAGTTGAATAtcatcaccgagggttaataaatccaataaccaacgtaaa
acctattgaatatacgTTTTATTCTATAACTAAaggcaaaaacaaaagaa
aaacttgaaacattttttggagtcccattttttacaaaataaaaagtgCT
CACAAAATCGCATGttcgaaatttttctttttatcaactttttaattact
ttaagtgaaattgacaatagaactattttaaaagttttttctaGCAAGAG
TAAACatgcaaaaatccaaaaaaaaaattgaatgaaaaaattgcCATGTG
ATAATATAGCCATGGAGCCATGTGATATCGTTAATTATCAAACGGcagtt
tttgcctacaggtatagaATAGTATTTGTTATTATTTAttaaaccttcaa
ctactcaaaaatGTATAGATAGATGatatattttattatatataaCTAAA
CGTTTTTATGGACTTAGGCAAACTCTTAAATTTTATTGCAAACTTGTTTT
CCAAAGTTGAGATTTTCCAATTCAAAGCGTAAATTTCTAGTTTTTCATGG
TCCCTTTccttttttactaaaaaatttacattagAATATCTCAACTAACT
TTGAAaggtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10687..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039863 ID=TCONS_00039863|Name=TCONS_00039863|organism=Clytia hemisphaerica|type=transcript|length=8687bp|location=Sequence derived from alignment at sc0002223:10687..19373+ (Clytia hemisphaerica)
TTAAGGTTTAAAATAATGACTGGAACACAAAGAACATTCAGAAAGAAAGT
TGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTAGAAAAAGGACTACTT
ATGTCCAACCTTTCATGAGCAGTTCATCTCAATCAAAGTACTTGAAAAAT
GAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGATGAGAGCTCAAAAGA
GGATAACTTTGTCACTGATTCAGTAAACAAAACAAACGATGATTCAAAAA
GGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTTGGGGCATGGGATACC
TTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAAGTTCGATGAAATGCT
ACCCACAATATGTGTTATCTGTGAAACAAAATTACTTGAAAATTGTGTAT
GGTGCAAAACATGTGGGCCAAGAACCACATATTGCAGTGGATGTGCTGTT
AAGATCCATAAGCACATGCCTTTTCATTGTCTGTATGAAATAAATGTAAG
TATTCTAATCCTAGAGTAACTGGTAATAGGGTATACTCTTGGGTCTCAAA
TGAAATAAACATACAGGtacatttaaaataaattaagaTTATTTTTGAGG
TCTTTATGATAACCCAacttgattctttttttgtgaAGCTGGACCCTTGC
CTGATTACATATTGAGATAATTTTTTGCTCAGGGCTGAAGTGGTCAAAGG
GATTTCATATTTTGATACCAACGGATGGATTTCTGTTTCAGGGCTGGAGC
CTTAGCAGCTTAGGTTGCTTATGAAAGTAATGTATAGAAAAAGCGTTCTC
TTCTAGAAAGCATGGAATGTACAGGAAAGTAGTTGCAGATTTCTTTCCTG
TCATTTGCGCTAGATTCAGGGTTTAGTGGTCTTTTGAAGAAGTGACAATA
ATCAGACTGGccatcaaaaaacttttgatttatATAATTTCTTCCTAATC
TATTTGAAGGATGATGGGTTTCACgaatttcaagtcaattatGAGCTGAA
AAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTATTGACAG
TAATTTCAGAAACAGGTATTAAAAATCCTTTACATGTCATTACTTTAAAG
GATCACATGGTGTCATGCAAGTTTTTTGGGTCCCCCATCCGGTGTTGAAA
ACCCCCATCTGGCTTTCCTTCCCCATTACTGTTTGATTTCTGGTCTCTCG
ATCTGAAAATTACTTATATAAAGTTGTTGGTTCACATCAAAATGAATTAT
AAATGATAAATTCATGCAAAAACATTATacaaaaaaagatattcatgTAA
TCAATAAGTAAGATTGATACCTTTCTTTGATGTTTaccttggaaaaaaaa
ttcatccccTCCCAGACCAACAATGTGATATTAATTTATTCTCTGATAAA
AACAGGCTACCTGATAATCTAATTAAATTGTTCATGCAAATAtccttttg
aaagttttaaaactttGGGTCTATGGTTCTTTTTTTAAACGTTATGATTT
TTCATAGTTACAGAATTTCAGCATTATGTTCTATAAGACATAGATACAAA
TAGGGGGGAAAGATAAAATctatatatttgaataattttttttcaaaatt
acgtCATCTTTTCTAGGACTACATCATCAGTGCTCTATCTATTTTTGTGA
ATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGGCCTGTGA
CTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACACCTTTTC
ATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattctttttgtgaTGG
TCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGGTAAATATTTTCA
TGATAAACTAGTATTAGTtgcccttcgtggaaacaattttTTAGGTGTCT
AAAGGATACTGAATATTCGGAGCATGCCACTTAAAAtatatgttattatt
attactttgcttgatttattttttaataaatagGCTCTTACACTCGTTGA
GATATTTTCAATTATTCTTGTTTTCTGGCGCttgagtttttatttttatt
tttagagaaGATATCTAAATCGTTTGGAGAAGACTGACACTATCGATCAG
TTTAGGAACTTTCGGAGGCAACTTCTTAACCTCAGAAGCATTTGTGAAGA
CTTCACTGGACTAGAAGAGTGTGCTGCTTGTCCCAAAGTAAGAATTACTT
TTACACATGCTTTGATCAGAGTGGAACCACTAAGGTGCATAACATTGTTG
ACACTAAGGAACACATTTTAATAAGCAAACCTATTATTTTCTGGCTCATT
GCTAAGGTCGCTAAGATTTTTGTCAAACTCAAGGTTGCAGTTGTTGCTCA
ATAGGCCACTAAGGTTTTCTCTTGTTCATGTTGTGAACATCTGTTGTTGA
AGAAGAAGTTGCTTTGCTTATCAAAGGCTCAGAGTACAGCAAATTTATGA
GCAAGGCCAACCTTAGCAACTAGCTTGCTTTAAGTAAAATAATGTGTATT
AAAGAAGGAATATCAACTTTCGTTTAGGAAGACGGCAGTGTGTTCTATTG
TTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCCAAATCAA
AGAAACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATGAAGATATC
GATTCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAGGTGAgatt
tttattctattttaaaaAGCAGCGATGCCTAAACATATTTTAATTTATTA
AATTCTCTAGGAGTgacctttaaaatttttcaaaatcaaatcaaagcaAT
CTTAATCTAAGAAGCTGTgaaattaatattttgaccTATAAAAATTGAGA
TGCTATGAGTCCTCATGAGTCCTTATATGTTCTGATATACTGTGTTACAA
AATATTATAATTGAAAGTCATTGTAGTTCTTTAGGAACTTCTTACTAGGA
TTGCAGTAACTTCCAAGCCGGAAACAATCTTCGatcgaaaagaaaaacaa
agaaattaagTGTTACCGGAATTTTCGGAATGTCTTGTAGACACGAATTT
CCAAAACTCTTCCTAAATATGAGGCATGGTGAAAGGTATTAAAATGAGTT
GAATTTTATCCCCAACAATTAAATTGAATCTCAAGGAGAATAGAATCAAA
TACAATTTTaatgaagtttgaaaaaagaatttctttccAAGATCTTCAGA
TCCATTTTAAGCGCTTGAATCTTGGCAACTTGGTTacttataaaaataac
gtgTAGTATAATTCCTTAGAAATGAATATTTGTGGGAAGATATTTTCCCG
AAAGCAATCTTTGTGGAACTGCTCTGAAATCATAAATCGATCCTAAATCT
GGTCTTTCTTGGACAAAGTTCATctgcaaaattttggcaaaaataaatTA
ACGAAATTTAAGCCAGGGTGAGCTCATTTTCCATATGCTACTCTTTGGTG
CTTAATTTTAGGGGACAATAGAATAAGCGGGACGGGTGGGTACTCGagaa
taaaatcaacaaaatcggGGAGGGGTCATAATGTGTCTGATTGGGGCCTG
ATTGTGCTGAAGATTCCTTGGAATCTTGGAAAATGAAGCTTTTAACCCTT
TTTTGGTACTTCGTAGgataaaagtcataaaatgggAGGTCATTATTAAT
GATATCGGGGTTGAAAAATTATTGTAcatcatataaaaattttcaggctG
GGATATGCTGTGTATTTACTTGACCGTTTGTTGGAAGAAAATCATGACAA
AAGTTTACTCACTCACGTTATATATGACATAGCCTGTGTATTAAAATCGC
ATTTGAAGGTATGTACACTTACTGTATTCTTATTTCCAATGTCATTCTCA
AAGATTATAGCGACGCCGGGTACCTGCTAGTATTAGCGATGTTTTGCTCT
TCATCTATGACTAATGTTCACAAGCAAACCACATTAGACGTTCTttgctt
ttttaaagaaaaagaacacGTTTACGAAGTACAAAGATTTCCACTTTGGA
ATACCAGTTTTTCACTCATATGGTCACAGAGGGGATTGTCAGgtaataat
ttttcttctccgCCATTATGATGAATGTATCTTCGTCATCCTGGAGTGGC
AATAAACAAAATTGAAGCACGCTTTGATGATGCCCTTATTATCACCCTCC
GTTACACTAGAAAATATCAGTAATACACTCTTCttgagatgcataaattt
attgttgtcctcgttttcaaacagatttcattgttataaaattacatatt
cacaatgataattgtgttgtttacacctcatgagacattttgaatttcaa
gtacTTTTGTTTTAGAGttaatgtttgccttttgggaatttaaattggtt
taaatgtataatttcgtagcaatgaaatctgtttgaaaacgaggacaaca
ataaatttatgcatctcgagaagagtgtattcccTGAACTTTATTGTTTA
TCCAGGTAAAGAATTCCATTCGTCGGCTTGAAACGTTTGGTTTGATGGAT
GGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAGGTCGTTTTCAAAGAT
AACCAAAGAAATGACTCCGGCGCATCGAACTGACTTACTCAGTGATGCCT
TGATGCACTTTGGCTCAAAGAAAATGGGAAACATAGGCAAGTACTTTAAG
AAACATTCGAGATCCATCTTATAAATTCTTTGACTTGTGACGTTTTATTT
AGACTAAAACACAAGCAtactatttttcaatttttttatttttcgtatAA
GCTTGCACAATTTTTGCTTTAGGGAAATATCTTGTATTTTTGCGTAACAA
GGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGATTAAAGCGATATGCT
CTAAACTGACTGGTAATGGTTCCTTTCATTGTCATTCAGATCGTGTCTAC
AATCCATTATGGTATAAATAAGTATTTTGATTCCCTACTGTTTATTTACT
AGTTGTAGGAAAACTATAATTATTATACCTTTATCTGCGGGAGAAAACTC
GTTCGTCAGTTCTTGAAATTCAATCACATGAAAGTCTCTCCCCTCTAGGT
AAATCGTAATGATCCCTATCATAAAAAGGAAATAAAGAGTATTGTATTCa
gtgaaataaaaaagctactACTTAGCAATTCATCAATCTCATTCCGTTGT
AGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGAGGAAG
ACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGGTCATTACTGC
TTCTACCACAGCACTTTTCTTGGACTACTTAATCTATTTACTTACTTTAA
TTTATCTTAATTTGCTTGAGCGCTTTACGTTGTAACAGAACTTAAAGAAT
AATGATTTTAGGCTTTTAGAACcattttttgtattatttttcaGATATAC
AACCGATCTGTATTTTGAGGACATCTAGGCAACTATTGACAAAAGCATTG
ACGGTACTCTACTGACGGACACGACAAATAATATTCTAGGACAAATCTTC
AAACGTTCAGCCAATTTGAAAACAATGACAGTACTCCTTTGACATTGacg
aataaataaaataataacgTAGCGTTAGAATTTTGTAGCATTTTACTTCT
TTATAATTAGAGGTAAGCTTATAATTCAGCTACGTGTTATAGGCATTGGG
TTTAAAGTCCCGAAGGGGCTAGACGTGAAACACCTGGATGGGACATTTCC
TAGCTATTTAATCTTTATCTTTATCCAGAACACCTGCGtatggtttttac
acaaatgccgGATTGAAATTAAATCTATCactagatttcgaaaaatatag
tacttgaaaacaaagaattaaGTGGTTTCACTTTTCTTGCCTGTAAACAA
AagtttctactctagcccttcgggctttaaacttaaTGGTAATAGCAATG
tgcgtttttctttttagatgcTGCCGACTGGAGACAAATTTATTACGAAA
AGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCACTGATGAGTGAAAAA
GTATCTGATGTTGCCTTACATCAACGAAAAGCAAAACGGTAATTTAGGTT
TTAAGAGTTACCATTATCCATGCTttttaaaattacttttttattttgtt
acacATTTTAAATCAAGAACAAACGTTTAGTAACTATGACGGACCGATTA
CCCTTAAAAGTATATTCAAATCTAAGGTATCGAGCCCTTTATTCATGTGA
ATAGCGTACCGCGgtaaatctaaaaatagacttTATTTTTGCCATGATCA
TTACTTTCCATATGTTTGTATGAgtagttccaatcccatcaacgtTTGCG
TTAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATATNCTTTC
CATATGTTTGTATGAgtagttccaatcccatcaacgtTTGCGTTAATTTC
TTTTgtacgttaattgcatcctatGACAAAAGATATGTAGCAACGTGCAC
GTTTTTTAAATTGAGACGAATTGGATTGTGGAATTGCAATTTGTACAAAA
ATAATGGAAACTGAAAAGTTTAAAACACGCATAACATCTTTCTCCCTTTC
CCTATGAAactgtttggtaaatttttgtttggCTGAAAATTATATATTTC
TTTCATTAGCATCGAATCAAGTTTAAATACATTTGAAAAAGAGCATATGA
TTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTTAGACTTCAACATATG
AAATATCTAaagcaaaaatcaaaagaaaccatCTCAACTTTGTATAGCCG
ATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGAGACGATATGCAGGTG
CATACatacattcttttatttttacaggCAGTGTTGAATTCAATTTGTAC
TTGTACTTGgtaattttggtcggggaagaTTGATCAAAATGTCACTGACT
AAAATTTCCCTCCGACTTATTTTCCCCCGAAGGTATACGATAACGATATC
AAccagtttgtttactttttattttaaaatcgtACATAATTTTTCATAGA
TGGATCGGCCATTGCCACAAGACTATCCAAACAGATCAACAGAGTTTGCA
AGGAAATAAAGGATTTGACGGCTTCTTTCAACAACATTAATACTGAAATA
TCACTGGATTTTAAGACCGTTAGCTACATAGAAGTATTAGACGTTAAGTC
CCCCATCTATAATGATACCActctttttttcaaagtaagTGTCTactttg
attttacttttgattttgttttagaaTTGAATTGGAATTTGTTTCGTGGA
GTACTATTTCACAAATGAAGAAATCTTTTGTTCAATATTAGACCAAATTT
GCCCTGAAATGGCCAAATTTAAGTACATATTGACCATAATTTTGACGTAA
ATAAAAGTTTCATTTGATGTGTTTAAAAATCTTATATCTTACTTAGGTAA
AATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCAATATCAT
ATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGCGTGAGAT
GGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTTACTGCCT
GTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAACCGAAAGA
ATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtctttttcaac
TGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTTTCCCATG
AAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTCAAGCTAT
TCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttatttttgaaa
ttatataagATACAACAATCACGATACGGTTTCGGTTTAAAGAATCTCGA
AGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACCTGCTTTt
cctcaaaaaaaaatcataaaattcgatttttgagattttcgtCACGGATC
CTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACTTCATTct
taataagcagatattcaataggtaaaagttggttattgagatttattaac
ccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgagggttaata
aatccaataaccaacgtaaaacctattgaatatacgTTTTATTCTATAAC
TAAaggcaaaaacaaaagaaaaacttgaaacattttttggagtcccattt
tttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaatttttcttt
ttatcaactttttaattactttaagtgaaattgacaatagaactatttta
aaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaaaaaattg
aatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGTGATATCG
TTAATTATCAAACGGcagtttttgcctacaggtatagaATAGTATTTGTT
ATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGATGatata
ttttattatatataaCTAAACGTTTTTATGGACTTAGGCAAACTCTTAAA
TTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTCAAAGCGT
AAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaaatttaca
ttagAATATCTCAACTAACTTTGAAaggtcaattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039863-exon-sc0002223-1491911889:10687..11181TCONS_00039863-exon-sc0002223-1491911889:10687..11181Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:10687..11181TCONS_00039863-exon-sc0002223-1510915933:10687..11181Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:10687..11181TCONS_00039863-exon-sc0002223-1575043694:10687..11181Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:11646..11751TCONS_00039863-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:11646..11751TCONS_00039863-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:11646..11751TCONS_00039863-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:12303..12523TCONS_00039863-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:12303..12523TCONS_00039863-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:12303..12523TCONS_00039863-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:12742..12873TCONS_00039863-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:12742..12873TCONS_00039863-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:12742..12873TCONS_00039863-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:13214..13378TCONS_00039863-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:13214..13378TCONS_00039863-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:13214..13378TCONS_00039863-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:14383..14494TCONS_00039863-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:14383..14494TCONS_00039863-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:14383..14494TCONS_00039863-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:14645..14728TCONS_00039863-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:14645..14728TCONS_00039863-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:14645..14728TCONS_00039863-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:15142..15322TCONS_00039863-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:15142..15322TCONS_00039863-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:15142..15322TCONS_00039863-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:15459..15548TCONS_00039863-exon-sc0002223-1491911889:15459..15548Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:15459..15548TCONS_00039863-exon-sc0002223-1510915933:15459..15548Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:15459..15548TCONS_00039863-exon-sc0002223-1575043694:15459..15548Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:15839..15925TCONS_00039863-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:15839..15925TCONS_00039863-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:15839..15925TCONS_00039863-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:16081..16139TCONS_00039863-exon-sc0002223-1491911889:16081..16139Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:16081..16139TCONS_00039863-exon-sc0002223-1510915933:16081..16139Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:16081..16139TCONS_00039863-exon-sc0002223-1575043694:16081..16139Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:16604..16724TCONS_00039863-exon-sc0002223-1491911889:16604..16724Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:16604..16724TCONS_00039863-exon-sc0002223-1510915933:16604..16724Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:16604..16724TCONS_00039863-exon-sc0002223-1575043694:16604..16724Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:17296..17483TCONS_00039863-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:17296..17483TCONS_00039863-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:17296..17483TCONS_00039863-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:17686..17870TCONS_00039863-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:17686..17870TCONS_00039863-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:17686..17870TCONS_00039863-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1491911889:18083..19373TCONS_00039863-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1510915933:18083..19373TCONS_00039863-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039863-exon-sc0002223-1575043694:18083..19373TCONS_00039863-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10687..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.139508	0	0.259009	0.127832	2.0386	1.44852	1.05455	1.77208	3.22085	3.36551	1.23042	2.71857	2.50432	3.18029	4.47694e-10	0	0.0313218	0	0.160063	0	0.0933596	0.00140126	0	1.36926e-10	0.121749	0	0	0.128305	0.113447	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039863 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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