TCONS_00039860 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039860
Unique NameTCONS_00039860
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4195

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039860 ID=TCONS_00039860|Name=TCONS_00039860|organism=Clytia hemisphaerica|type=transcript|length=4195bp
TTCTTTCTTCCTTTTATCATGATGTATTTTTCTATTGCATCTCCCCTTTG
AATTCTCCTCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACATATCC
CTTTTTCATAAAGTTCATGTTTTATAAAACAGATATTCATTTTGTTTCCT
GTACAATGATTATGTTTAAGGTTTAAAATAATGACTGGAACACAAAGAAC
ATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTA
GAAAAAGGACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCA
AAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGA
TGAGAGCTCAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAAAACAA
ACGATGATTCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTT
GGGGCATGGGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAA
GTTCGATGAAATGCTACCCACAATATGTGTTATCTGTGAAACAAAATTAC
TTGAAAATTGTGTATGGTGCAAAACATGTGGGCCAAGAACCACATATTGC
AGTGGATGTGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTA
TGAAATAAATGATGATGGGTTTCACgaatttcaagtcaattatGAGCTGA
AAAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTATTGACA
GTAATTTCAGAAACAGGACTACATCATCAGTGCTCTATCTATTTTTGTGA
ATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGGCCTGTGA
CTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACACCTTTTC
ATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattctttttgtgaTGG
TCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGagaaGATATCTAA
ATCGTTTGGAGAAGACTGACACTATCGATCAGTTTAGGAACTTTCGGAGG
CAACTTCTTAACCTCAGAAGCATTTGTGAAGACTTCACTGGACTAGAAGA
GTGTGCTGCTTGTCCCAAAGAAGACGGCAGTGTGTTCTATTGTTTAGATG
CAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCCAAATCAAAGAAACTT
GCGATGCGATCTTCCAATTTATTTGTTCCTGATGAAGATATCGATTCATT
CATGGTGAACTATGATGATGCTTTAAAAACAAAGgctGGGATATGCTGTG
TATTTACTTGACCGTTTGTTGGAAGAAAATCATGACAAAAGTTTACTCAC
TCACGTTATATATGACATAGCCTGTGTATTAAAATCGCATTTGAAGaaaa
agaacacGTTTACGAAGTACAAAGATTTCCACTTTGGAATACCAGTTTTT
CACTCATATGGTCACAGAGGGGATTGTCAGGTAAAGAATTCCATTCGTCG
GCTTGAAACGTTTGGTTTGATGGATGGAGAACTGATGGAGCGCCTGTGGT
CTTACCTGAGGTCGTTTTCAAAGATAACCAAAGAAATGACTCCGGCGCAT
CGAACTGACTTACTCAGTGATGCCTTGATGCACTTTGGCTCAAAGAAAAT
GGGAAACATAGGGAAATATCTTGTATTTTTGCGTAACAAGGCGATCGAAA
CCGTGAATTCCTGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTGACT
GGTAATGGTTCCTTTCATTGTCATTCAGATCGTGTCTACAATCCATTATG
AAGTTAAAGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGAGGAAGAC
AGTGTTGTAAACAAGGACAAAAGGCCACTGCAACCAGATATACAACCGAT
CTGTATTTTGAGGACATCTAGGCAACTATTGACAAAAGCATTGACGGTAC
TCTACTGACGGACACGACAAATAATATTCTAGGACAAATCTTCAAACGTT
CAGCCAATTTGAAAACAATGACAGTACTCCTTTGACATTGacgaataaat
aaaataataacgTAGCGTTAGAATTTTGTAGCATTTTACTTCTTTATAAT
TAGAGGTAAGCTTATAATTCAGCTACGTGTTATAGGCATTGGGTTTAAAG
TCCCGAAGGGGCTAGACGTGAAACACCTGGATGGGACATTTCCTAGCTAT
TTAATCTTTATCTTTATCCAGAACACCTGCGtatggtttttacacaaatg
ccgGATTGAAATTAAATCTATCactagatttcgaaaaatatagtacttga
aaacaaagaattaaGTGGTTTCACTTTTCTTGCCTGTAAACAAAagtttc
tactctagcccttcgggctttaaacttaaTGGTAATAGCAATGtgcgttt
ttctttttagatgcTGCCGACTGGAGACAAATTTATTACGAAAAGCTTAA
AACCTTCAACAGGGAATCTTCTTTAGCACTGATGAGTGAAAAAGTATCTG
ATGTTGCCTTACATCAACGAAAAGCAAAACGCATCGAATCAAGTTTAAAT
ACATTTGAAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCTCA
AGAATTTAGACTTCAACATATGAAATATCTAaagcaaaaatcaaaagaaa
ccatCTCAACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTA
CTGAAGAGACGATATGCAGATGGATCGGCCATTGCCACAAGACTATCCAA
ACAGATCAACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCA
ACAACATTAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACATA
GAAGTATTAGACGTTAAGTCCCCCATCTATAATGATACCActcttttttt
caaaGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTC
AATATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAG
CGTGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCT
TACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAA
CCGAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtct
ttttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGT
TTCCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATT
CAAGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttat
ttttgaaattatataagATACAACAATCACGATACGGTTTCGGTTTAAAG
AATCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCAC
CTGCTTTtcctcaaaaaaaaatcataaaattcgatttttgagattttcgt
CACGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAAC
TTCATTcttaataagcagatattcaataggtaaaagttggttattgagat
ttattaacccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgag
ggttaataaatccaataaccaacgtaaaacctattgaatatacgTTTTAT
TCTATAACTAAaggcaaaaacaaaagaaaaacttgaaacattttttggag
tcccattttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaat
ttttctttttatcaactttttaattactttaagtgaaattgacaatagaa
ctattttaaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaa
aaaaattgaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATG
TGATATCGTTAATTATCAAACGGcagtttttgcctacaggtatagaATAG
TATTTGTTATTATTTAttaaaccttcaactactcaaaaatGTATAGATAG
ATGatatattttattatatataaCTAAACGTTTTTATGGACTTAGGCAAA
CTCTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATT
CAAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaa
aatttacattagAATATCTCAACTAACTTTGAAaggtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10522..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039860 ID=TCONS_00039860|Name=TCONS_00039860|organism=Clytia hemisphaerica|type=transcript|length=8852bp|location=Sequence derived from alignment at sc0002223:10522..19373+ (Clytia hemisphaerica)
TTCTTTCTTCCTTTTATCATGATGTATTTTTCTATTGCATCTCCCCTTTG
AATTCTCCTCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACATATCC
CTTTTTCATAAAGTTCATGTTTTATAAAACAGATATTCATTTTGTTTCCT
GTACAATGATTATGTTTAAGGTTTAAAATAATGACTGGAACACAAAGAAC
ATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAATGGTA
GAAAAAGGACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTCAATCA
AAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGATGAGGA
TGAGAGCTCAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAAAACAA
ACGATGATTCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGGAGCTT
GGGGCATGGGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCAGAGAA
GTTCGATGAAATGCTACCCACAATATGTGTTATCTGTGAAACAAAATTAC
TTGAAAATTGTGTATGGTGCAAAACATGTGGGCCAAGAACCACATATTGC
AGTGGATGTGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGTCTGTA
TGAAATAAATGTAAGTATTCTAATCCTAGAGTAACTGGTAATAGGGTATA
CTCTTGGGTCTCAAATGAAATAAACATACAGGtacatttaaaataaatta
agaTTATTTTTGAGGTCTTTATGATAACCCAacttgattctttttttgtg
aAGCTGGACCCTTGCCTGATTACATATTGAGATAATTTTTTGCTCAGGGC
TGAAGTGGTCAAAGGGATTTCATATTTTGATACCAACGGATGGATTTCTG
TTTCAGGGCTGGAGCCTTAGCAGCTTAGGTTGCTTATGAAAGTAATGTAT
AGAAAAAGCGTTCTCTTCTAGAAAGCATGGAATGTACAGGAAAGTAGTTG
CAGATTTCTTTCCTGTCATTTGCGCTAGATTCAGGGTTTAGTGGTCTTTT
GAAGAAGTGACAATAATCAGACTGGccatcaaaaaacttttgatttatAT
AATTTCTTCCTAATCTATTTGAAGGATGATGGGTTTCACgaatttcaagt
caattatGAGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAAGC
CTAGATTATTGACAGTAATTTCAGAAACAGGTATTAAAAATCCTTTACAT
GTCATTACTTTAAAGGATCACATGGTGTCATGCAAGTTTTTTGGGTCCCC
CATCCGGTGTTGAAAACCCCCATCTGGCTTTCCTTCCCCATTACTGTTTG
ATTTCTGGTCTCTCGATCTGAAAATTACTTATATAAAGTTGTTGGTTCAC
ATCAAAATGAATTATAAATGATAAATTCATGCAAAAACATTATacaaaaa
aagatattcatgTAATCAATAAGTAAGATTGATACCTTTCTTTGATGTTT
accttggaaaaaaaattcatccccTCCCAGACCAACAATGTGATATTAAT
TTATTCTCTGATAAAAACAGGCTACCTGATAATCTAATTAAATTGTTCAT
GCAAATAtccttttgaaagttttaaaactttGGGTCTATGGTTCTTTTTT
TAAACGTTATGATTTTTCATAGTTACAGAATTTCAGCATTATGTTCTATA
AGACATAGATACAAATAGGGGGGAAAGATAAAATctatatatttgaataa
ttttttttcaaaattacgtCATCTTTTCTAGGACTACATCATCAGTGCTC
TATCTATTTTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTTG
ACTTGTGGCCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGAT
CTCCTACACCTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttca
ttctttttgtgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCT
TGGTAAATATTTTCATGATAAACTAGTATTAGTtgcccttcgtggaaaca
attttTTAGGTGTCTAAAGGATACTGAATATTCGGAGCATGCCACTTAAA
AtatatgttattattattactttgcttgatttattttttaataaatagGC
TCTTACACTCGTTGAGATATTTTCAATTATTCTTGTTTTCTGGCGCttga
gtttttatttttatttttagagaaGATATCTAAATCGTTTGGAGAAGACT
GACACTATCGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAACCTCAG
AAGCATTTGTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTGTCCCA
AAGTAAGAATTACTTTTACACATGCTTTGATCAGAGTGGAACCACTAAGG
TGCATAACATTGTTGACACTAAGGAACACATTTTAATAAGCAAACCTATT
ATTTTCTGGCTCATTGCTAAGGTCGCTAAGATTTTTGTCAAACTCAAGGT
TGCAGTTGTTGCTCAATAGGCCACTAAGGTTTTCTCTTGTTCATGTTGTG
AACATCTGTTGTTGAAGAAGAAGTTGCTTTGCTTATCAAAGGCTCAGAGT
ACAGCAAATTTATGAGCAAGGCCAACCTTAGCAACTAGCTTGCTTTAAGT
AAAATAATGTGTATTAAAGAAGGAATATCAACTTTCGTTTAGGAAGACGG
CAGTGTGTTCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAAAGCGT
CTGCTTCCAAATCAAAGAAACTTGCGATGCGATCTTCCAATTTATTTGTT
CCTGATGAAGATATCGATTCATTCATGGTGAACTATGATGATGCTTTAAA
AACAAAGGTGAgatttttattctattttaaaaAGCAGCGATGCCTAAACA
TATTTTAATTTATTAAATTCTCTAGGAGTgacctttaaaatttttcaaaa
tcaaatcaaagcaATCTTAATCTAAGAAGCTGTgaaattaatattttgac
cTATAAAAATTGAGATGCTATGAGTCCTCATGAGTCCTTATATGTTCTGA
TATACTGTGTTACAAAATATTATAATTGAAAGTCATTGTAGTTCTTTAGG
AACTTCTTACTAGGATTGCAGTAACTTCCAAGCCGGAAACAATCTTCGat
cgaaaagaaaaacaaagaaattaagTGTTACCGGAATTTTCGGAATGTCT
TGTAGACACGAATTTCCAAAACTCTTCCTAAATATGAGGCATGGTGAAAG
GTATTAAAATGAGTTGAATTTTATCCCCAACAATTAAATTGAATCTCAAG
GAGAATAGAATCAAATACAATTTTaatgaagtttgaaaaaagaatttctt
tccAAGATCTTCAGATCCATTTTAAGCGCTTGAATCTTGGCAACTTGGTT
acttataaaaataacgtgTAGTATAATTCCTTAGAAATGAATATTTGTGG
GAAGATATTTTCCCGAAAGCAATCTTTGTGGAACTGCTCTGAAATCATAA
ATCGATCCTAAATCTGGTCTTTCTTGGACAAAGTTCATctgcaaaatttt
ggcaaaaataaatTAACGAAATTTAAGCCAGGGTGAGCTCATTTTCCATA
TGCTACTCTTTGGTGCTTAATTTTAGGGGACAATAGAATAAGCGGGACGG
GTGGGTACTCGagaataaaatcaacaaaatcggGGAGGGGTCATAATGTG
TCTGATTGGGGCCTGATTGTGCTGAAGATTCCTTGGAATCTTGGAAAATG
AAGCTTTTAACCCTTTTTTGGTACTTCGTAGgataaaagtcataaaatgg
gAGGTCATTATTAATGATATCGGGGTTGAAAAATTATTGTAcatcatata
aaaattttcaggctGGGATATGCTGTGTATTTACTTGACCGTTTGTTGGA
AGAAAATCATGACAAAAGTTTACTCACTCACGTTATATATGACATAGCCT
GTGTATTAAAATCGCATTTGAAGGTATGTACACTTACTGTATTCTTATTT
CCAATGTCATTCTCAAAGATTATAGCGACGCCGGGTACCTGCTAGTATTA
GCGATGTTTTGCTCTTCATCTATGACTAATGTTCACAAGCAAACCACATT
AGACGTTCTttgcttttttaaagaaaaagaacacGTTTACGAAGTACAAA
GATTTCCACTTTGGAATACCAGTTTTTCACTCATATGGTCACAGAGGGGA
TTGTCAGgtaataatttttcttctccgCCATTATGATGAATGTATCTTCG
TCATCCTGGAGTGGCAATAAACAAAATTGAAGCACGCTTTGATGATGCCC
TTATTATCACCCTCCGTTACACTAGAAAATATCAGTAATACACTCTTCtt
gagatgcataaatttattgttgtcctcgttttcaaacagatttcattgtt
ataaaattacatattcacaatgataattgtgttgtttacacctcatgaga
cattttgaatttcaagtacTTTTGTTTTAGAGttaatgtttgccttttgg
gaatttaaattggtttaaatgtataatttcgtagcaatgaaatctgtttg
aaaacgaggacaacaataaatttatgcatctcgagaagagtgtattcccT
GAACTTTATTGTTTATCCAGGTAAAGAATTCCATTCGTCGGCTTGAAACG
TTTGGTTTGATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTGAG
GTCGTTTTCAAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGACT
TACTCAGTGATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACATA
GGCAAGTACTTTAAGAAACATTCGAGATCCATCTTATAAATTCTTTGACT
TGTGACGTTTTATTTAGACTAAAACACAAGCAtactatttttcaattttt
ttatttttcgtatAAGCTTGCACAATTTTTGCTTTAGGGAAATATCTTGT
ATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTCGGAGA
TTAAAGCGATATGCTCTAAACTGACTGGTAATGGTTCCTTTCATTGTCAT
TCAGATCGTGTCTACAATCCATTATGGTATAAATAAGTATTTTGATTCCC
TACTGTTTATTTACTAGTTGTAGGAAAACTATAATTATTATACCTTTATC
TGCGGGAGAAAACTCGTTCGTCAGTTCTTGAAATTCAATCACATGAAAGT
CTCTCCCCTCTAGGTAAATCGTAATGATCCCTATCATAAAAAGGAAATAA
AGAGTATTGTATTCagtgaaataaaaaagctactACTTAGCAATTCATCA
ATCTCATTCCGTTGTAGAAGTTAAAGTGGATGAGAAAGTCATTGAAGCTT
GGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCACTGCAA
CCAGGTCATTACTGCTTCTACCACAGCACTTTTCTTGGACTACTTAATCT
ATTTACTTACTTTAATTTATCTTAATTTGCTTGAGCGCTTTACGTTGTAA
CAGAACTTAAAGAATAATGATTTTAGGCTTTTAGAACcattttttgtatt
atttttcaGATATACAACCGATCTGTATTTTGAGGACATCTAGGCAACTA
TTGACAAAAGCATTGACGGTACTCTACTGACGGACACGACAAATAATATT
CTAGGACAAATCTTCAAACGTTCAGCCAATTTGAAAACAATGACAGTACT
CCTTTGACATTGacgaataaataaaataataacgTAGCGTTAGAATTTTG
TAGCATTTTACTTCTTTATAATTAGAGGTAAGCTTATAATTCAGCTACGT
GTTATAGGCATTGGGTTTAAAGTCCCGAAGGGGCTAGACGTGAAACACCT
GGATGGGACATTTCCTAGCTATTTAATCTTTATCTTTATCCAGAACACCT
GCGtatggtttttacacaaatgccgGATTGAAATTAAATCTATCactaga
tttcgaaaaatatagtacttgaaaacaaagaattaaGTGGTTTCACTTTT
CTTGCCTGTAAACAAAagtttctactctagcccttcgggctttaaactta
aTGGTAATAGCAATGtgcgtttttctttttagatgcTGCCGACTGGAGAC
AAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTTTAGCA
CTGATGAGTGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAAGCAAA
ACGGTAATTTAGGTTTTAAGAGTTACCATTATCCATGCTttttaaaatta
cttttttattttgttacacATTTTAAATCAAGAACAAACGTTTAGTAACT
ATGACGGACCGATTACCCTTAAAAGTATATTCAAATCTAAGGTATCGAGC
CCTTTATTCATGTGAATAGCGTACCGCGgtaaatctaaaaatagacttTA
TTTTTGCCATGATCATTACTTTCCATATGTTTGTATGAgtagttccaatc
ccatcaacgtTTGCGTTAATTTCTTTTgtacgttaattgcatcctatGAC
AAAAGATATNCTTTCCATATGTTTGTATGAgtagttccaatcccatcaac
gtTTGCGTTAATTTCTTTTgtacgttaattgcatcctatGACAAAAGATA
TGTAGCAACGTGCACGTTTTTTAAATTGAGACGAATTGGATTGTGGAATT
GCAATTTGTACAAAAATAATGGAAACTGAAAAGTTTAAAACACGCATAAC
ATCTTTCTCCCTTTCCCTATGAAactgtttggtaaatttttgtttggCTG
AAAATTATATATTTCTTTCATTAGCATCGAATCAAGTTTAAATACATTTG
AAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTT
AGACTTCAACATATGAAATATCTAaagcaaaaatcaaaagaaaccatCTC
AACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGA
GACGATATGCAGGTGCATACatacattcttttatttttacaggCAGTGTT
GAATTCAATTTGTACTTGTACTTGgtaattttggtcggggaagaTTGATC
AAAATGTCACTGACTAAAATTTCCCTCCGACTTATTTTCCCCCGAAGGTA
TACGATAACGATATCAAccagtttgtttactttttattttaaaatcgtAC
ATAATTTTTCATAGATGGATCGGCCATTGCCACAAGACTATCCAAACAGA
TCAACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAAC
ATTAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACATAGAAGT
ATTAGACGTTAAGTCCCCCATCTATAATGATACCActctttttttcaaag
taagTGTCTactttgattttacttttgattttgttttagaaTTGAATTGG
AATTTGTTTCGTGGAGTACTATTTCACAAATGAAGAAATCTTTTGTTCAA
TATTAGACCAAATTTGCCCTGAAATGGCCAAATTTAAGTACATATTGACC
ATAATTTTGACGTAAATAAAAGTTTCATTTGATGTGTTTAAAAATCTTAT
ATCTTACTTAGGTAAAATGTTCTTCAGTTCCATACACGGTCATCAAATCT
CTTGTTCAATATCATATGCGGAAACAACGAGCACAAGAAGAAATATCGCT
TGTTGAGCGTGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTT
GTTTGCTTACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATAT
TTGCTAACCGAAAGAATACGTGCCATTGAACTTTTCATTTATGAGTtgaa
aaagtctttttcaacTGTCGTAGCTAACCCTTCATTTGACATCAAGAATA
ACCAAGTTTCCCATGAAATGCCAGATGAGGATGAATATTTCAGTGACTTT
TCTGATTCAAGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTga
cctttatttttgaaattatataagATACAACAATCACGATACGGTTTCGG
TTTAAAGAATCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTT
GATCCACCTGCTTTtcctcaaaaaaaaatcataaaattcgatttttgaga
ttttcgtCACGGATCCTAACGAATATTTTAATCAGATTCATTTTCGCGAG
TTTGAACTTCATTcttaataagcagatattcaataggtaaaagttggtta
ttgagatttattaacccgaggtgatgaaTATTCAACGAGTTGAATAtcat
caccgagggttaataaatccaataaccaacgtaaaacctattgaatatac
gTTTTATTCTATAACTAAaggcaaaaacaaaagaaaaacttgaaacattt
tttggagtcccattttttacaaaataaaaagtgCTCACAAAATCGCATGt
tcgaaatttttctttttatcaactttttaattactttaagtgaaattgac
aatagaactattttaaaagttttttctaGCAAGAGTAAACatgcaaaaat
ccaaaaaaaaaattgaatgaaaaaattgcCATGTGATAATATAGCCATGG
AGCCATGTGATATCGTTAATTATCAAACGGcagtttttgcctacaggtat
agaATAGTATTTGTTATTATTTAttaaaccttcaactactcaaaaatGTA
TAGATAGATGatatattttattatatataaCTAAACGTTTTTATGGACTT
AGGCAAACTCTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTT
TCCAATTCAAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTcctttttt
actaaaaaatttacattagAATATCTCAACTAACTTTGAAaggtcaattt
tc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039860-exon-sc0002223-1491911889:10522..11181TCONS_00039860-exon-sc0002223-1491911889:10522..11181Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:10522..11181TCONS_00039860-exon-sc0002223-1510915933:10522..11181Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:10522..11181TCONS_00039860-exon-sc0002223-1575043694:10522..11181Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:11646..11751TCONS_00039860-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:11646..11751TCONS_00039860-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:11646..11751TCONS_00039860-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:12303..12523TCONS_00039860-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:12303..12523TCONS_00039860-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:12303..12523TCONS_00039860-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:12742..12873TCONS_00039860-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:12742..12873TCONS_00039860-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:12742..12873TCONS_00039860-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:13214..13378TCONS_00039860-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:13214..13378TCONS_00039860-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:13214..13378TCONS_00039860-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:14383..14494TCONS_00039860-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:14383..14494TCONS_00039860-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:14383..14494TCONS_00039860-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:14645..14728TCONS_00039860-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:14645..14728TCONS_00039860-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:14645..14728TCONS_00039860-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:15142..15322TCONS_00039860-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:15142..15322TCONS_00039860-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:15142..15322TCONS_00039860-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:15459..15597TCONS_00039860-exon-sc0002223-1491911889:15459..15597Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:15459..15597TCONS_00039860-exon-sc0002223-1510915933:15459..15597Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:15459..15597TCONS_00039860-exon-sc0002223-1575043694:15459..15597Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:15839..15925TCONS_00039860-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:15839..15925TCONS_00039860-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:15839..15925TCONS_00039860-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:16081..16724TCONS_00039860-exon-sc0002223-1491911889:16081..16724Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:16081..16724TCONS_00039860-exon-sc0002223-1510915933:16081..16724Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:16081..16724TCONS_00039860-exon-sc0002223-1575043694:16081..16724Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:17296..17483TCONS_00039860-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:17296..17483TCONS_00039860-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:17296..17483TCONS_00039860-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:17686..17870TCONS_00039860-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:17686..17870TCONS_00039860-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:17686..17870TCONS_00039860-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1491911889:18083..19373TCONS_00039860-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1510915933:18083..19373TCONS_00039860-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039860-exon-sc0002223-1575043694:18083..19373TCONS_00039860-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10522..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	4.13733e-06	0	1.13093e-09	0.00599142	0.0620899	1.26832e-08	1.48098	0.744931	0.0002708	2.31753e-08	0	0	0	0	0	0	0	1.93343e-05	0	0	0	1.97041e-10	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039860 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top