TCONS_00039858 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039858
Unique NameTCONS_00039858
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039858 ID=TCONS_00039858|Name=TCONS_00039858|organism=Clytia hemisphaerica|type=transcript|length=4288bp
CTTTATTCTTTCTTCCTTTTATCATGATGTATTTTTCTATTGCATCTCCC
CTTTGAATTCTCCTCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACA
TATCCCTTTTTCATAAAGTTCATGTTTTATAAAACAGATATTCATTTTGT
TTCCTGTACAATGATTATGTTTAAGGTTTAAAATAATGACTGGAACACAA
AGAACATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAA
TGGTAGAAAAAGGACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTC
AATCAAAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGAT
GAGGATGAGAGCTCAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAA
AACAAACGATGATTCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGG
AGCTTGGGGCATGGGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCA
GAGAAGTTCGATGAAATGCTACCCACAATATGTGTTATCTGTGAAACAAA
ATTACTTGAAAATTGTGTATGGTGCAAAACATGTGGGCCAAGAACCACAT
ATTGCAGTGGATGTGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGT
CTGTATGAAATAAATGATGATGGGTTTCACgaatttcaagtcaattatGA
GCTGAAAAGCAAACATACAAGCCAATGTCTGTATGCCAAGCCTAGATTAT
TGACAGTAATTTCAGAAACAGGACTACATCATCAGTGCTCTATCTATTTT
TGTGAATGTGAAAGTGATTTGGAAACACTACTTCGTCTTGACTTGTGGCC
TGTGACTCCAATCAAACCAAATACGGTGGTGTCTATAGATCTCCTACACC
TTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatcttttcattctttttgt
gaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACACTGTCTTGagaaGATA
TCTAAATCGTTTGGAGAAGACTGACACTATCGATCAGTTTAGGAACTTTC
GGAGGCAACTTCTTAACCTCAGAAGCATTTGTGAAGACTTCACTGGACTA
GAAGAGTGTGCTGCTTGTCCCAAAGAAGACGGCAGTGTGTTCTATTGTTT
AGATGCAAACTTTGGTCTAGTACTCAAAGCGTCTGCTTCCAAATCAAAGA
AACTTGCGATGCGATCTTCCAATTTATTTGTTCCTGATGAAGATATCGAT
TCATTCATGGTGAACTATGATGATGCTTTAAAAACAAAGGATTGCAGTAA
CTTCCAAGCCGGAAACAATCTTCGatcgaaaagaaaaacaaagaaattaa
gTGTTACCGGAATTTTCGGAATGTCTTGTAGACACGAATTTCCAAAACTC
TTCCTAAATATGAGGCATGGTGAAAGgctGGGATATGCTGTGTATTTACT
TGACCGTTTGTTGGAAGAAAATCATGACAAAAGTTTACTCACTCACGTTA
TATATGACATAGCCTGTGTATTAAAATCGCATTTGAAGaaaaagaacacG
TTTACGAAGTACAAAGATTTCCACTTTGGAATACCAGTTTTTCACTCATA
TGGTCACAGAGGGGATTGTCAGGTAAAGAATTCCATTCGTCGGCTTGAAA
CGTTTGGTTTGATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTACCTG
AGGTCGTTTTCAAAGATAACCAAAGAAATGACTCCGGCGCATCGAACTGA
CTTACTCAGTGATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAAACA
TAGGGAAATATCTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAAT
TCCTGTGAGTCGGAGATTAAAGCGATATGCTCTAAACTGACTGAAGTTAA
AGTGGATGAGAAAGTCATTGAAGCTTGGAAACGAGAGGAAGACAGTGTTG
TAAACAAGGACAAAAGGCCACTGCAACCAGATATACAACCGATCTGTATT
TTGAGGACATCTAGGCAACTATTGACAAAAGCATTGACGGTACTCTACTG
ACGGACACGACAAATAATATTCTAGGACAAATCTTCAAACGTTCAGCCAA
TTTGAAAACAATGACAGTACTCCTTTGACATTGacgaataaataaaataa
taacgTAGCGTTAGAATTTTGTAGCATTTTACTTCTTTATAATTAGAGGT
AAGCTTATAATTCAGCTACGTGTTATAGGCATTGGGTTTAAAGTCCCGAA
GGGGCTAGACGTGAAACACCTGGATGGGACATTTCCTAGCTATTTAATCT
TTATCTTTATCCAGAACACCTGCGtatggtttttacacaaatgccgGATT
GAAATTAAATCTATCactagatttcgaaaaatatagtacttgaaaacaaa
gaattaaGTGGTTTCACTTTTCTTGCCTGTAAACAAAagtttctactcta
gcccttcgggctttaaacttaaTGGTAATAGCAATGtgcgtttttctttt
tagatgcTGCCGACTGGAGACAAATTTATTACGAAAAGCTTAAAACCTTC
AACAGGGAATCTTCTTTAGCACTGATGAGTGAAAAAGTATCTGATGTTGC
CTTACATCAACGAAAAGCAAAACGCATCGAATCAAGTTTAAATACATTTG
AAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAGAATTT
AGACTTCAACATATGAAATATCTAaagcaaaaatcaaaagaaaccatCTC
AACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACTGAAGA
GACGATATGCAGATGGATCGGCCATTGCCACAAGACTATCCAAACAGATC
AACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCAACAACAT
TAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACATAGAAGTAT
TAGACGTTAAGTCCCCCATCTATAATGATACCActctttttttcaaaGTA
AAATGTTCTTCAGTTCCATACACGGTCATCAAATCTCTTGTTCAATATCA
TATGCGGAAACAACGAGCACAAGAAGAAATATCGCTTGTTGAGCGTGAGA
TGGAAGTCACAGTCTCTTATTGGGAAAAACAACTTTGTTTGCTTACTGCC
TGTTTGGGGCGTCAAACTTTAAAAGGCATCAAATATTTGCTAACCGAAAG
AATACGTGCCATTGAACTTTTCATTTATGAGTtgaaaaagtctttttcaa
cTGTCGTAGCTAACCCTTCATTTGACATCAAGAATAACCAAGTTTCCCAT
GAAATGCCAGATGAGGATGAATATTTCAGTGACTTTTCTGATTCAAGCTA
TTCAGGAATTGATAGTGAAGAGAATGAGGAAGTTgacctttatttttgaa
attatataagATACAACAATCACGATACGGTTTCGGTTTAAAGAATCTCG
AAGATTTTTACGTGCTTGAAATTTTTAGCTGCACTTGATCCACCTGCTTT
tcctcaaaaaaaaatcataaaattcgatttttgagattttcgtCACGGAT
CCTAACGAATATTTTAATCAGATTCATTTTCGCGAGTTTGAACTTCATTc
ttaataagcagatattcaataggtaaaagttggttattgagatttattaa
cccgaggtgatgaaTATTCAACGAGTTGAATAtcatcaccgagggttaat
aaatccaataaccaacgtaaaacctattgaatatacgTTTTATTCTATAA
CTAAaggcaaaaacaaaagaaaaacttgaaacattttttggagtcccatt
ttttacaaaataaaaagtgCTCACAAAATCGCATGttcgaaatttttctt
tttatcaactttttaattactttaagtgaaattgacaatagaactatttt
aaaagttttttctaGCAAGAGTAAACatgcaaaaatccaaaaaaaaaatt
gaatgaaaaaattgcCATGTGATAATATAGCCATGGAGCCATGTGATATC
GTTAATTATCAAACGGcagtttttgcctacaggtatagaATAGTATTTGT
TATTATTTAttaaaccttcaactactcaaaaatGTATAGATAGATGatat
attttattatatataaCTAAACGTTTTTATGGACTTAGGCAAACTCTTAA
ATTTTATTGCAAACTTGTTTTCCAAAGTTGAGATTTTCCAATTCAAAGCG
TAAATTTCTAGTTTTTCATGGTCCCTTTccttttttactaaaaaatttac
attagAATATCTCAACTAACTTTGAAaggtcaattttc
Run BLAST on NCBI

transcript from alignment at sc0002223:10517..19373+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039858 ID=TCONS_00039858|Name=TCONS_00039858|organism=Clytia hemisphaerica|type=transcript|length=8857bp|location=Sequence derived from alignment at sc0002223:10517..19373+ (Clytia hemisphaerica)
CTTTATTCTTTCTTCCTTTTATCATGATGTATTTTTCTATTGCATCTCCC CTTTGAATTCTCCTCAGGGCTTTAACACCAGCATTCCAGGTATAAAAACA TATCCCTTTTTCATAAAGTTCATGTTTTATAAAACAGATATTCATTTTGT TTCCTGTACAATGATTATGTTTAAGGTTTAAAATAATGACTGGAACACAA AGAACATTCAGAAAGAAAGTTGTCAAAGTTAAAAGCACAAAAATAAGAAA TGGTAGAAAAAGGACTACTTATGTCCAACCTTTCATGAGCAGTTCATCTC AATCAAAGTACTTGAAAAATGAGTCTTTCAGTCCTTGTATATCTGGGGAT GAGGATGAGAGCTCAAAAGAGGATAACTTTGTCACTGATTCAGTAAACAA AACAAACGATGATTCAAAAAGGTCAAAGTACCAGACAATGAAGGAAAAGG AGCTTGGGGCATGGGATACCTTCTCACCTGAAGTGATAAGGAAGTACGCA GAGAAGTTCGATGAAATGCTACCCACAATATGTGTTATCTGTGAAACAAA ATTACTTGAAAATTGTGTATGGTGCAAAACATGTGGGCCAAGAACCACAT ATTGCAGTGGATGTGCTGTTAAGATCCATAAGCACATGCCTTTTCATTGT CTGTATGAAATAAATGTAAGTATTCTAATCCTAGAGTAACTGGTAATAGG GTATACTCTTGGGTCTCAAATGAAATAAACATACAGGtacatttaaaata aattaagaTTATTTTTGAGGTCTTTATGATAACCCAacttgattcttttt ttgtgaAGCTGGACCCTTGCCTGATTACATATTGAGATAATTTTTTGCTC AGGGCTGAAGTGGTCAAAGGGATTTCATATTTTGATACCAACGGATGGAT TTCTGTTTCAGGGCTGGAGCCTTAGCAGCTTAGGTTGCTTATGAAAGTAA TGTATAGAAAAAGCGTTCTCTTCTAGAAAGCATGGAATGTACAGGAAAGT AGTTGCAGATTTCTTTCCTGTCATTTGCGCTAGATTCAGGGTTTAGTGGT CTTTTGAAGAAGTGACAATAATCAGACTGGccatcaaaaaacttttgatt tatATAATTTCTTCCTAATCTATTTGAAGGATGATGGGTTTCACgaattt caagtcaattatGAGCTGAAAAGCAAACATACAAGCCAATGTCTGTATGC CAAGCCTAGATTATTGACAGTAATTTCAGAAACAGGTATTAAAAATCCTT TACATGTCATTACTTTAAAGGATCACATGGTGTCATGCAAGTTTTTTGGG TCCCCCATCCGGTGTTGAAAACCCCCATCTGGCTTTCCTTCCCCATTACT GTTTGATTTCTGGTCTCTCGATCTGAAAATTACTTATATAAAGTTGTTGG TTCACATCAAAATGAATTATAAATGATAAATTCATGCAAAAACATTATac aaaaaaagatattcatgTAATCAATAAGTAAGATTGATACCTTTCTTTGA TGTTTaccttggaaaaaaaattcatccccTCCCAGACCAACAATGTGATA TTAATTTATTCTCTGATAAAAACAGGCTACCTGATAATCTAATTAAATTG TTCATGCAAATAtccttttgaaagttttaaaactttGGGTCTATGGTTCT TTTTTTAAACGTTATGATTTTTCATAGTTACAGAATTTCAGCATTATGTT CTATAAGACATAGATACAAATAGGGGGGAAAGATAAAATctatatatttg aataattttttttcaaaattacgtCATCTTTTCTAGGACTACATCATCAG TGCTCTATCTATTTTTGTGAATGTGAAAGTGATTTGGAAACACTACTTCG TCTTGACTTGTGGCCTGTGACTCCAATCAAACCAAATACGGTGGTGTCTA TAGATCTCCTACACCTTTTCATCTCGTTGCAGTTGGAGGGGAAGAtatct tttcattctttttgtgaTGGTCTAGCGTGGAAAAAAGGAATGGGAAACAC TGTCTTGGTAAATATTTTCATGATAAACTAGTATTAGTtgcccttcgtgg aaacaattttTTAGGTGTCTAAAGGATACTGAATATTCGGAGCATGCCAC TTAAAAtatatgttattattattactttgcttgatttattttttaataaa tagGCTCTTACACTCGTTGAGATATTTTCAATTATTCTTGTTTTCTGGCG CttgagtttttatttttatttttagagaaGATATCTAAATCGTTTGGAGA AGACTGACACTATCGATCAGTTTAGGAACTTTCGGAGGCAACTTCTTAAC CTCAGAAGCATTTGTGAAGACTTCACTGGACTAGAAGAGTGTGCTGCTTG TCCCAAAGTAAGAATTACTTTTACACATGCTTTGATCAGAGTGGAACCAC TAAGGTGCATAACATTGTTGACACTAAGGAACACATTTTAATAAGCAAAC CTATTATTTTCTGGCTCATTGCTAAGGTCGCTAAGATTTTTGTCAAACTC AAGGTTGCAGTTGTTGCTCAATAGGCCACTAAGGTTTTCTCTTGTTCATG TTGTGAACATCTGTTGTTGAAGAAGAAGTTGCTTTGCTTATCAAAGGCTC AGAGTACAGCAAATTTATGAGCAAGGCCAACCTTAGCAACTAGCTTGCTT TAAGTAAAATAATGTGTATTAAAGAAGGAATATCAACTTTCGTTTAGGAA GACGGCAGTGTGTTCTATTGTTTAGATGCAAACTTTGGTCTAGTACTCAA AGCGTCTGCTTCCAAATCAAAGAAACTTGCGATGCGATCTTCCAATTTAT TTGTTCCTGATGAAGATATCGATTCATTCATGGTGAACTATGATGATGCT TTAAAAACAAAGGTGAgatttttattctattttaaaaAGCAGCGATGCCT AAACATATTTTAATTTATTAAATTCTCTAGGAGTgacctttaaaattttt caaaatcaaatcaaagcaATCTTAATCTAAGAAGCTGTgaaattaatatt ttgaccTATAAAAATTGAGATGCTATGAGTCCTCATGAGTCCTTATATGT TCTGATATACTGTGTTACAAAATATTATAATTGAAAGTCATTGTAGTTCT TTAGGAACTTCTTACTAGGATTGCAGTAACTTCCAAGCCGGAAACAATCT TCGatcgaaaagaaaaacaaagaaattaagTGTTACCGGAATTTTCGGAA TGTCTTGTAGACACGAATTTCCAAAACTCTTCCTAAATATGAGGCATGGT GAAAGGTATTAAAATGAGTTGAATTTTATCCCCAACAATTAAATTGAATC TCAAGGAGAATAGAATCAAATACAATTTTaatgaagtttgaaaaaagaat ttctttccAAGATCTTCAGATCCATTTTAAGCGCTTGAATCTTGGCAACT TGGTTacttataaaaataacgtgTAGTATAATTCCTTAGAAATGAATATT TGTGGGAAGATATTTTCCCGAAAGCAATCTTTGTGGAACTGCTCTGAAAT CATAAATCGATCCTAAATCTGGTCTTTCTTGGACAAAGTTCATctgcaaa attttggcaaaaataaatTAACGAAATTTAAGCCAGGGTGAGCTCATTTT CCATATGCTACTCTTTGGTGCTTAATTTTAGGGGACAATAGAATAAGCGG GACGGGTGGGTACTCGagaataaaatcaacaaaatcggGGAGGGGTCATA ATGTGTCTGATTGGGGCCTGATTGTGCTGAAGATTCCTTGGAATCTTGGA AAATGAAGCTTTTAACCCTTTTTTGGTACTTCGTAGgataaaagtcataa aatgggAGGTCATTATTAATGATATCGGGGTTGAAAAATTATTGTAcatc atataaaaattttcaggctGGGATATGCTGTGTATTTACTTGACCGTTTG TTGGAAGAAAATCATGACAAAAGTTTACTCACTCACGTTATATATGACAT AGCCTGTGTATTAAAATCGCATTTGAAGGTATGTACACTTACTGTATTCT TATTTCCAATGTCATTCTCAAAGATTATAGCGACGCCGGGTACCTGCTAG TATTAGCGATGTTTTGCTCTTCATCTATGACTAATGTTCACAAGCAAACC ACATTAGACGTTCTttgcttttttaaagaaaaagaacacGTTTACGAAGT ACAAAGATTTCCACTTTGGAATACCAGTTTTTCACTCATATGGTCACAGA GGGGATTGTCAGgtaataatttttcttctccgCCATTATGATGAATGTAT CTTCGTCATCCTGGAGTGGCAATAAACAAAATTGAAGCACGCTTTGATGA TGCCCTTATTATCACCCTCCGTTACACTAGAAAATATCAGTAATACACTC TTCttgagatgcataaatttattgttgtcctcgttttcaaacagatttca ttgttataaaattacatattcacaatgataattgtgttgtttacacctca tgagacattttgaatttcaagtacTTTTGTTTTAGAGttaatgtttgcct tttgggaatttaaattggtttaaatgtataatttcgtagcaatgaaatct gtttgaaaacgaggacaacaataaatttatgcatctcgagaagagtgtat tcccTGAACTTTATTGTTTATCCAGGTAAAGAATTCCATTCGTCGGCTTG AAACGTTTGGTTTGATGGATGGAGAACTGATGGAGCGCCTGTGGTCTTAC CTGAGGTCGTTTTCAAAGATAACCAAAGAAATGACTCCGGCGCATCGAAC TGACTTACTCAGTGATGCCTTGATGCACTTTGGCTCAAAGAAAATGGGAA ACATAGGCAAGTACTTTAAGAAACATTCGAGATCCATCTTATAAATTCTT TGACTTGTGACGTTTTATTTAGACTAAAACACAAGCAtactatttttcaa tttttttatttttcgtatAAGCTTGCACAATTTTTGCTTTAGGGAAATAT CTTGTATTTTTGCGTAACAAGGCGATCGAAACCGTGAATTCCTGTGAGTC GGAGATTAAAGCGATATGCTCTAAACTGACTGGTAATGGTTCCTTTCATT GTCATTCAGATCGTGTCTACAATCCATTATGGTATAAATAAGTATTTTGA TTCCCTACTGTTTATTTACTAGTTGTAGGAAAACTATAATTATTATACCT TTATCTGCGGGAGAAAACTCGTTCGTCAGTTCTTGAAATTCAATCACATG AAAGTCTCTCCCCTCTAGGTAAATCGTAATGATCCCTATCATAAAAAGGA AATAAAGAGTATTGTATTCagtgaaataaaaaagctactACTTAGCAATT CATCAATCTCATTCCGTTGTAGAAGTTAAAGTGGATGAGAAAGTCATTGA AGCTTGGAAACGAGAGGAAGACAGTGTTGTAAACAAGGACAAAAGGCCAC TGCAACCAGGTCATTACTGCTTCTACCACAGCACTTTTCTTGGACTACTT AATCTATTTACTTACTTTAATTTATCTTAATTTGCTTGAGCGCTTTACGT TGTAACAGAACTTAAAGAATAATGATTTTAGGCTTTTAGAACcatttttt gtattatttttcaGATATACAACCGATCTGTATTTTGAGGACATCTAGGC AACTATTGACAAAAGCATTGACGGTACTCTACTGACGGACACGACAAATA ATATTCTAGGACAAATCTTCAAACGTTCAGCCAATTTGAAAACAATGACA GTACTCCTTTGACATTGacgaataaataaaataataacgTAGCGTTAGAA TTTTGTAGCATTTTACTTCTTTATAATTAGAGGTAAGCTTATAATTCAGC TACGTGTTATAGGCATTGGGTTTAAAGTCCCGAAGGGGCTAGACGTGAAA CACCTGGATGGGACATTTCCTAGCTATTTAATCTTTATCTTTATCCAGAA CACCTGCGtatggtttttacacaaatgccgGATTGAAATTAAATCTATCa ctagatttcgaaaaatatagtacttgaaaacaaagaattaaGTGGTTTCA CTTTTCTTGCCTGTAAACAAAagtttctactctagcccttcgggctttaa acttaaTGGTAATAGCAATGtgcgtttttctttttagatgcTGCCGACTG GAGACAAATTTATTACGAAAAGCTTAAAACCTTCAACAGGGAATCTTCTT TAGCACTGATGAGTGAAAAAGTATCTGATGTTGCCTTACATCAACGAAAA GCAAAACGGTAATTTAGGTTTTAAGAGTTACCATTATCCATGCTttttaa aattacttttttattttgttacacATTTTAAATCAAGAACAAACGTTTAG TAACTATGACGGACCGATTACCCTTAAAAGTATATTCAAATCTAAGGTAT CGAGCCCTTTATTCATGTGAATAGCGTACCGCGgtaaatctaaaaataga cttTATTTTTGCCATGATCATTACTTTCCATATGTTTGTATGAgtagttc caatcccatcaacgtTTGCGTTAATTTCTTTTgtacgttaattgcatcct atGACAAAAGATATNCTTTCCATATGTTTGTATGAgtagttccaatccca tcaacgtTTGCGTTAATTTCTTTTgtacgttaattgcatcctatGACAAA AGATATGTAGCAACGTGCACGTTTTTTAAATTGAGACGAATTGGATTGTG GAATTGCAATTTGTACAAAAATAATGGAAACTGAAAAGTTTAAAACACGC ATAACATCTTTCTCCCTTTCCCTATGAAactgtttggtaaatttttgttt ggCTGAAAATTATATATTTCTTTCATTAGCATCGAATCAAGTTTAAATAC ATTTGAAAAAGAGCATATGATTGCTAAACGATGGCTTCCAGCTTCTCAAG AATTTAGACTTCAACATATGAAATATCTAaagcaaaaatcaaaagaaacc atCTCAACTTTGTATAGCCGATGCTCTGAGAGAATGATGCTTTTAGTACT GAAGAGACGATATGCAGGTGCATACatacattcttttatttttacaggCA GTGTTGAATTCAATTTGTACTTGTACTTGgtaattttggtcggggaagaT TGATCAAAATGTCACTGACTAAAATTTCCCTCCGACTTATTTTCCCCCGA AGGTATACGATAACGATATCAAccagtttgtttactttttattttaaaat cgtACATAATTTTTCATAGATGGATCGGCCATTGCCACAAGACTATCCAA ACAGATCAACAGAGTTTGCAAGGAAATAAAGGATTTGACGGCTTCTTTCA ACAACATTAATACTGAAATATCACTGGATTTTAAGACCGTTAGCTACATA GAAGTATTAGACGTTAAGTCCCCCATCTATAATGATACCActcttttttt caaagtaagTGTCTactttgattttacttttgattttgttttagaaTTGA ATTGGAATTTGTTTCGTGGAGTACTATTTCACAAATGAAGAAATCTTTTG TTCAATATTAGACCAAATTTGCCCTGAAATGGCCAAATTTAAGTACATAT TGACCATAATTTTGACGTAAATAAAAGTTTCATTTGATGTGTTTAAAAAT CTTATATCTTACTTAGGTAAAATGTTCTTCAGTTCCATACACGGTCATCA AATCTCTTGTTCAATATCATATGCGGAAACAACGAGCACAAGAAGAAATA TCGCTTGTTGAGCGTGAGATGGAAGTCACAGTCTCTTATTGGGAAAAACA ACTTTGTTTGCTTACTGCCTGTTTGGGGCGTCAAACTTTAAAAGGCATCA AATATTTGCTAACCGAAAGAATACGTGCCATTGAACTTTTCATTTATGAG TtgaaaaagtctttttcaacTGTCGTAGCTAACCCTTCATTTGACATCAA GAATAACCAAGTTTCCCATGAAATGCCAGATGAGGATGAATATTTCAGTG ACTTTTCTGATTCAAGCTATTCAGGAATTGATAGTGAAGAGAATGAGGAA GTTgacctttatttttgaaattatataagATACAACAATCACGATACGGT TTCGGTTTAAAGAATCTCGAAGATTTTTACGTGCTTGAAATTTTTAGCTG CACTTGATCCACCTGCTTTtcctcaaaaaaaaatcataaaattcgatttt tgagattttcgtCACGGATCCTAACGAATATTTTAATCAGATTCATTTTC GCGAGTTTGAACTTCATTcttaataagcagatattcaataggtaaaagtt ggttattgagatttattaacccgaggtgatgaaTATTCAACGAGTTGAAT Atcatcaccgagggttaataaatccaataaccaacgtaaaacctattgaa tatacgTTTTATTCTATAACTAAaggcaaaaacaaaagaaaaacttgaaa cattttttggagtcccattttttacaaaataaaaagtgCTCACAAAATCG CATGttcgaaatttttctttttatcaactttttaattactttaagtgaaa ttgacaatagaactattttaaaagttttttctaGCAAGAGTAAACatgca aaaatccaaaaaaaaaattgaatgaaaaaattgcCATGTGATAATATAGC CATGGAGCCATGTGATATCGTTAATTATCAAACGGcagtttttgcctaca ggtatagaATAGTATTTGTTATTATTTAttaaaccttcaactactcaaaa atGTATAGATAGATGatatattttattatatataaCTAAACGTTTTTATG GACTTAGGCAAACTCTTAAATTTTATTGCAAACTTGTTTTCCAAAGTTGA GATTTTCCAATTCAAAGCGTAAATTTCTAGTTTTTCATGGTCCCTTTcct tttttactaaaaaatttacattagAATATCTCAACTAACTTTGAAaggtc aattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_024125XLOC_024125Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039858-exon-sc0002223-1491911889:10517..11181TCONS_00039858-exon-sc0002223-1491911889:10517..11181Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:10517..11181TCONS_00039858-exon-sc0002223-1510915933:10517..11181Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:10517..11181TCONS_00039858-exon-sc0002223-1575043694:10517..11181Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:11646..11751TCONS_00039858-exon-sc0002223-1491911889:11646..11751Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:11646..11751TCONS_00039858-exon-sc0002223-1510915933:11646..11751Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:11646..11751TCONS_00039858-exon-sc0002223-1575043694:11646..11751Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:12303..12523TCONS_00039858-exon-sc0002223-1491911889:12303..12523Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:12303..12523TCONS_00039858-exon-sc0002223-1510915933:12303..12523Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:12303..12523TCONS_00039858-exon-sc0002223-1575043694:12303..12523Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:12742..12873TCONS_00039858-exon-sc0002223-1491911889:12742..12873Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:12742..12873TCONS_00039858-exon-sc0002223-1510915933:12742..12873Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:12742..12873TCONS_00039858-exon-sc0002223-1575043694:12742..12873Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:13214..13378TCONS_00039858-exon-sc0002223-1491911889:13214..13378Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:13214..13378TCONS_00039858-exon-sc0002223-1510915933:13214..13378Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:13214..13378TCONS_00039858-exon-sc0002223-1575043694:13214..13378Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:13635..13771TCONS_00039858-exon-sc0002223-1491911889:13635..13771Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:13635..13771TCONS_00039858-exon-sc0002223-1510915933:13635..13771Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:13635..13771TCONS_00039858-exon-sc0002223-1575043694:13635..13771Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:14383..14494TCONS_00039858-exon-sc0002223-1491911889:14383..14494Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:14383..14494TCONS_00039858-exon-sc0002223-1510915933:14383..14494Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:14383..14494TCONS_00039858-exon-sc0002223-1575043694:14383..14494Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:14645..14728TCONS_00039858-exon-sc0002223-1491911889:14645..14728Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:14645..14728TCONS_00039858-exon-sc0002223-1510915933:14645..14728Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:14645..14728TCONS_00039858-exon-sc0002223-1575043694:14645..14728Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:15142..15322TCONS_00039858-exon-sc0002223-1491911889:15142..15322Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:15142..15322TCONS_00039858-exon-sc0002223-1510915933:15142..15322Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:15142..15322TCONS_00039858-exon-sc0002223-1575043694:15142..15322Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:15459..15548TCONS_00039858-exon-sc0002223-1491911889:15459..15548Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:15459..15548TCONS_00039858-exon-sc0002223-1510915933:15459..15548Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:15459..15548TCONS_00039858-exon-sc0002223-1575043694:15459..15548Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:15839..15925TCONS_00039858-exon-sc0002223-1491911889:15839..15925Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:15839..15925TCONS_00039858-exon-sc0002223-1510915933:15839..15925Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:15839..15925TCONS_00039858-exon-sc0002223-1575043694:15839..15925Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:16081..16724TCONS_00039858-exon-sc0002223-1491911889:16081..16724Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:16081..16724TCONS_00039858-exon-sc0002223-1510915933:16081..16724Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:16081..16724TCONS_00039858-exon-sc0002223-1575043694:16081..16724Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:17296..17483TCONS_00039858-exon-sc0002223-1491911889:17296..17483Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:17296..17483TCONS_00039858-exon-sc0002223-1510915933:17296..17483Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:17296..17483TCONS_00039858-exon-sc0002223-1575043694:17296..17483Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:17686..17870TCONS_00039858-exon-sc0002223-1491911889:17686..17870Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:17686..17870TCONS_00039858-exon-sc0002223-1510915933:17686..17870Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:17686..17870TCONS_00039858-exon-sc0002223-1575043694:17686..17870Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1491911889:18083..19373TCONS_00039858-exon-sc0002223-1491911889:18083..19373Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1510915933:18083..19373TCONS_00039858-exon-sc0002223-1510915933:18083..19373Clytia hemisphaericaexon
TCONS_00039858-exon-sc0002223-1575043694:18083..19373TCONS_00039858-exon-sc0002223-1575043694:18083..19373Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002223supercontigsc0002223:10517..19373 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.34086 2.63527 2.65292 3.88388 0.00364243 0 0.127495 4.94975e-06 6.02415e-06 0.567795 0 0 2.07001e-06 0 0 0 0 0 0 0 0 0.651936 0 0 0 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039858 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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