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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039843 ID=TCONS_00039843|Name=TCONS_00039843|organism=Clytia hemisphaerica|type=transcript|length=1935bp
CAAAACCTAAGCCACAGAACAAGATTTGTCAAGCCATTGCAGAAATCGAT
AGGCATATGAAGAAAAAGGGATACGCTATATGTGAAGGTATGGTTTACAA
AAAGCCCAAGGAGTGCAAGTTTACTTATGTGATGTGTTCGAAAATCAAGA
AGTATCTGATGAGATGTCTGAAAATTACAAAGATTGCCGAGCTGTTGACT
CCACATATTGAGAGAGTTACGGAATTGCTGTCTGATCCAGATTGCGGACT
GATAACACCAATGACACGACTGTTCAACGTGATTGAAGTTTTGCCACATG
GTACATGTTTTTTGATAACAGAAAAGcgttttgtaaaaataaagaaattt
gcACCAGATCACACACCGAGAACGTTTATTCGATACGAGTATAAGGCTGA
CCGTTGTCCCTATCCAATTCCGTTCATCCAAGGTATATTTAACAGTTTTC
CCAAGCAGAAGACGAGAGTGCACTTTCTTCAAAAATTCTACCAATTGTTG
TTACATAAGATGTTCCCTATCAAAGAACGAAAACTGTTACTACACGGAAA
ATCAAATTCAGGAAAAACCACCTGGTTCTACACATTACAAGGGCTGATTT
CAACTGAACACATTGCAGGTGTCACGCAAGAAGGCCGATTCGCTGGCCAC
ATGATAAAAGATTCAACAGAAGTAGTGTTCATGGATGAGTGGACATCCAA
CTCTCTAAGCTGTGAAGACGCCAAGAGAGTTTTACAAGGCGGACTTGTAA
TGCTATCACAGAAGCACAAGGATGCAAGAAAAGTGAAATATATGTCAGGC
TTTTACATCACAACAAACAAGAGGCCAAAATTTGGTACGAATACGAACAA
CCCGAATTCCGATTCATCATCGTCGTCATCCAGTTCTTCTTCTGAAGATG
AAAACGATGACAACGTTAGACGCAACAAAGATCACGATGCAGTGTATAAT
CGTCTCcgttgttttaaaacaaaaccacTCCCAGTGAAGGATTCCAGTGT
TGCCACCTGGCTGAGAAATAACTGTATGGAAGTATTCCATTACTGTGCAG
AAGTCCTAAAAGAAATGCCTCTTTTCGAATCGTGCACGAACGAAGAGCTA
TTTAGATTAAAGCGAGAGGAACTTCGCACAGGCGCCGTCTTCAACGATTA
CGATGGTTTAGTCGATCAATTACTGGCAGATTCCGACTTCGAAAGTGAGA
GTGCCGGCGAATCAACTTCATCTGAAACGACGTCTGAAGCTGAGTTGACA
TTCACAGAACACGAGATGGATTTGTATTTCTTGGGAGCTGATGAAAACGA
CCCTCAGAGATGGGAAAAGAAACATCCACTTTTCACCACACATCCAGATC
GCATTGACGAAGCACTATACCAACTTCGAAAGCTGTCTGAGGAGGAgtgg
aaaaaaattccaataaattGTCAAGATTTAACACGCTACAATATCAGAAA
AGCCAACAATTGGGATGGAATCGACAGCTTTTACACTGAATGGCTCAGAC
GTCAGAGTGCCGGAGGGTCGTCAAAAACCACATCAACTGACAAACGTAAT
GATAAAGATTGTCCACTCAAGCGTCGTCTTCAAGAAGATGGAATACTAGA
CCAGCACCGTTCTTCTGATAGCAGTGACCTCGAAGAAGCACTCACACAAC
CAAAGAAAAAGAGATTGAAAATCGCCAACGCGATTCAAATCACCGATTCT
GAGAGCGAAACACCAAACGCAATAACCAAACGCTATTTAGCAGAAATATT
GGACCGACCTAGCGTCGAGCTCAGTGACTTTACTGATAGTTCATCACACG
ATTCAATTGATGTAAAGCCTCTTCTACGATTCAAACAAGCAAATATGGAC
AAAGAAGTGGTAACAATATCTACAGATGAAGAAGATGATAAATCCAAAGT
TCCAAAATTGTTCAGTGCTAACGTTAGCGTACCAT Run BLAST on NCBI protein sequence of TCONS_00039843-protein >TCONS_00039843-protein ID=TCONS_00039843-protein|Name=TCONS_00039843-protein|organism=Clytia hemisphaerica|type=polypeptide|length=644bp
KPKPQNKICQAIAEIDRHMKKKGYAICEGMVYKKPKECKFTYVMCSKIKK
YLMRCLKITKIAELLTPHIERVTELLSDPDCGLITPMTRLFNVIEVLPHG
TCFLITEKRFVKIKKFAPDHTPRTFIRYEYKADRCPYPIPFIQGIFNSFP
KQKTRVHFLQKFYQLLLHKMFPIKERKLLLHGKSNSGKTTWFYTLQGLIS
TEHIAGVTQEGRFAGHMIKDSTEVVFMDEWTSNSLSCEDAKRVLQGGLVM
LSQKHKDARKVKYMSGFYITTNKRPKFGTNTNNPNSDSSSSSSSSSSEDE
NDDNVRRNKDHDAVYNRLRCFKTKPLPVKDSSVATWLRNNCMEVFHYCAE
VLKEMPLFESCTNEELFRLKREELRTGAVFNDYDGLVDQLLADSDFESES
AGESTSSETTSEAELTFTEHEMDLYFLGADENDPQRWEKKHPLFTTHPDR
IDEALYQLRKLSEEEWKKIPINCQDLTRYNIRKANNWDGIDSFYTEWLRR
QSAGGSSKTTSTDKRNDKDCPLKRRLQEDGILDQHRSSDSSDLEEALTQP
KKKRLKIANAIQITDSESETPNAITKRYLAEILDRPSVELSDFTDSSSHD
SIDVKPLLRFKQANMDKEVVTISTDEEDDKSKVPKLFSANVSVP Run BLAST on NCBI transcript from alignment at sc0002217:9274..12343- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039843 ID=TCONS_00039843|Name=TCONS_00039843|organism=Clytia hemisphaerica|type=transcript|length=3070bp|location=Sequence derived from alignment at sc0002217:9274..12343- (Clytia hemisphaerica)
CAAAACCTAAGCCACAGAACAAGATTTGTCAAGCCATTGCAGAAATCGAT
AGGCATATGAAGAAAAAGGGATACGCTATATGTGAAGGTATGGTTTACAA
AAAGCCCAAGGAGTGCAAGTTTACTTATGTGATGTGTTCGAAAATCAAGA
AGTATCTGATGAGATGTCTGAAAATTACAAAGATTGCCGAGCTGTTGACT
CCACATATTGAGAGAGTTACGGAATTGCTGTCTGATCCAGATTGCGGACT
GATAACACCAATGACACGACTGTTCAACGTGATTGAAGTTTTGCCACATG
GTACATGTTTTTTGATAACAGAAAAGCGTTTTGTAAAAATAAAGAAATTT
GCACCAGATCACACACCGAGAACGTTTATTCGATACGAGTATAAGGCTGA
CCGTTGTCCCTATCCAATTCCGTTCATCCAAGGTAACCCTTTTTTCAAGC
TAGGTTCAACATTTTTTCTTTGCTAAAGCGATCTCAAGTGAAAATGTCTT
TCATAAGATAAAATTTTTATTAGATGAATTGAATGTCATTTTTCTAACCA
AATCTCTTGACTTTTCAGGTATATTTAACAGTTTTCCCAAGCAGAAGACG
AGAGTGCACTTTCTTCAAAAATTCTACCAATTGTTGTTACATAAGATGTT
CCCTATCAAAGAACGAAAACTGTTACTACACGGAAAATCAAATTCAGGAA
AAACCACCTGGTTCTACACATTACAAGGTAAGAAACACCAAATTTTCCTT
TTAATGCATGAACTAAAGATGTTTTCTCGAATGTCGTAAAATCATTTTTC
ACAATACGTGGTAGAATTTATTACATATGATGTACTCGTTACCTTCTAGG
GCTGATTTCAACTGAACACATTGCAGGTGTCACGCAAGAAGGCCGATTCG
CTGGCCACATGATAAAAGATTCAACAGAAGTAGTGTTCATGGATGAGTGG
ACATCCAACTCTCTAAGCTGTGAAGACGCCAAGAGAGTTTTACAAGGTAT
CAATCAAATCAATATATTTTTCGTTGACTGTATTTATTTATTGAACTATT
GACTTTTCATGGCAAAACGAGGTTGTTTATCAAGGTTTTGCTGTCTGTTG
ACATTGTATTATTTGTCTATTCAGGCGGACTTGTAATGCTATCACAGAAG
CACAAGGATGCAAGAAAAGTGAAATATATGTCAGGCTTTTACATCACAAC
AAACAAGAGGCCAAAATTTGGTACGAATACGAACAACCCGAATTCCGATT
CATCATCGTCGTCATCCAGTTCTTCTTCTGAAGATGAAAACGATGACAAC
GTTAGACGCAACAAAGATCACGATGCAGTGTATAATCGTCTCCGTTGTTT
TAAAACAAAACCACTCCCAGTGAAGGATTCCAGTGTTGCCAGTAAGTAAA
ATTGAACTCAAAAATATTATTCATATGTTTGAGTCATTTTGAATTATGCA
TTCAGAACTTTTTTGGTTTGTAATAGATTATTTCTGAATNACTTGTAATG
CTATCACAGAAGCACAAGGATGCAAGAAAAGTGAAATATATGTCAGGCTT
TTACATCACAACAAACAAGAGGCCAAAATTTGGTACGAATACGAACAACC
CGAATTCCGATTCATCATCGTCGTCATCCAGTTCTTCTTCTGAAGATGAA
AACGATGACAACGTTAGACGCAACAAAGATCACGATGCAGTGTATAATCG
TCTCCGTTGTTTTAAAACAAAACCACTCCCAGTGAAGGATTCCAGTGTTG
CCAGTAAGTAAAATTGAACTCAAAAATATTATTCATATGTTTGAGTCATT
TTGAATTATGCATTCAGAACTTTTTTGGTTTGTAATAGATTATTTCTGAA
TATTGAACGGTTGGATAGGTCTAGTGCAATGGTGACTTCAGCTTTACATA
ATCGTTTGTTTAATTCTAAAATGCATTTTCCTTTATTTTTTCTAGCCTGG
CTGAGAAATAACTGTATGGAAGTATTCCATTACTGTGCAGAAGTCCTAAA
AGAAATGCCTCTTTTCGAATCGTGCACGAACGAAGAGCTATTTAGATTAA
AGCGAGAGGAACTTCGCACAGGCGCCGTCTTCAACGATTACGATGGTTTA
GTCGATCAATTACTGGCAGATTCCGACTTCGAAAGTGAGAGTGCCGGCGA
ATCAACTTCATCTGAAACGACGTCTGAAGCTGAGTTGACATTCACAGAAC
ACGAGATGGATTTGTATTTCTTGGGAGCTGATGAAAACGACCCTCAGAGA
TGGGAAAAGAAACATCCACTTTTCACCACACATCCAGATCGCATTGACGA
AGCACTATACCAACTTCGAAAGCTGTCTGAGGAGGAGTGGAAAAAAATTC
CAATAAATTGTCAAGATTTAACACGGTAAGATGGCTTCAATTAATCTCAG
GAATTTTTTCACAATACAAAATCGAGTCACCGTGTTTGACAAAATAGCTA
ATTACATTTAATAGATAAAAACGGACAGCCCGTATTCCGGGATTCTGCTA
TGGCCCTGGTAAATACCTAGAATATCAAAAGAATAAACATTCTAAAAGAC
TTTACCATTTTCACTTTTAGCTACAATATCAGAAAAGCCAACAATTGGGA
TGGAATCGACAGCTTTTACACTGAATGGCTCAGACGTCAGAGTGCCGGAG
GGTCGTCAAAAACCACATCAACTGACAAACGTAATGATAAAGATTGTCCA
CTCAAGCGTCGTCTTCAAGAAGATGGAATACTAGACCAGCACCGTTCTTC
TGATAGCAGTGACCTCGAAGAAGCACTCACACAACCAAAGAAAAAGAGAT
TGAAAATCGCCAACGCGATTCAAATCACCGATTCTGAGAGCGAAACACCA
AACGCAATAACCAAACGCTATTTAGCAGAAATATTGGACCGACCTAGCGT
CGAGCTCAGTGACTTTACTGATAGTTCATCACACGATTCAATTGATGTAA
AGCCTCTTCTACGATTCAAACAAGCAAATATGGACAAAGAAGTGGTAACA
ATATCTACAGATGAAGAAGATGATAAATCCAAAGTTCCAAAATTGTTCAG
TGCTAACGTTAGCGTACCAT Coding sequence (CDS) from alignment at sc0002217:9274..12343- >TCONS_00039843 ID=TCONS_00039843|Name=TCONS_00039843|organism=Clytia hemisphaerica|type=CDS|length=11592bp|location=Sequence derived from alignment at sc0002217:9274..12343- (Clytia hemisphaerica)
CTACAATATCAGAAAAGCCAACAATTGGGATGGAATCGACAGCTTTTACA
CTGAATGGCTCAGACGTCAGAGTGCCGGAGGGTCGTCAAAAACCACATCA
ACTGACAAACGTAATGATAAAGATTGTCCACTCAAGCGTCGTCTTCAAGA
AGATGGAATACTAGACCAGCACCGTTCTTCTGATAGCAGTGACCTCGAAG
AAGCACTCACACAACCAAAGAAAAAGAGATTGAAAATCGCCAACGCGATT
CAAATCACCGATTCTGAGAGCGAAACACCAAACGCAATAACCAAACGCTA
TTTAGCAGAAATATTGGACCGACCTAGCGTCGAGCTCAGTGACTTTACTG
ATAGTTCATCACACGATTCAATTGATGTAAAGCCTCTTCTACGATTCAAA
CAAGCAAATATGGACAAAGAAGTGGTAACAATATCTACAGATGAAGAAGA
TGATAAATCCAAAGTTCCAAAATTGTTCAGTGCTAACGTTAGCGTACCAC
CTGGCTGAGAAATAACTGTATGGAAGTATTCCATTACTGTGCAGAAGTCC
TAAAAGAAATGCCTCTTTTCGAATCGTGCACGAACGAAGAGCTATTTAGA
TTAAAGCGAGAGGAACTTCGCACAGGCGCCGTCTTCAACGATTACGATGG
TTTAGTCGATCAATTACTGGCAGATTCCGACTTCGAAAGTGAGAGTGCCG
GCGAATCAACTTCATCTGAAACGACGTCTGAAGCTGAGTTGACATTCACA
GAACACGAGATGGATTTGTATTTCTTGGGAGCTGATGAAAACGACCCTCA
GAGATGGGAAAAGAAACATCCACTTTTCACCACACATCCAGATCGCATTG
ACGAAGCACTATACCAACTTCGAAAGCTGTCTGAGGAGGAGTGGAAAAAA
ATTCCAATAAATTGTCAAGATTTAACACGGCGGACTTGTAATGCTATCAC
AGAAGCACAAGGATGCAAGAAAAGTGAAATATATGTCAGGCTTTTACATC
ACAACAAACAAGAGGCCAAAATTTGGTACGAATACGAACAACCCGAATTC
CGATTCATCATCGTCGTCATCCAGTTCTTCTTCTGAAGATGAAAACGATG
ACAACGTTAGACGCAACAAAGATCACGATGCAGTGTATAATCGTCTCCGT
TGTTTTAAAACAAAACCACTCCCAGTGAAGGATTCCAGTGTTGCCAGGCT
GATTTCAACTGAACACATTGCAGGTGTCACGCAAGAAGGCCGATTCGCTG
GCCACATGATAAAAGATTCAACAGAAGTAGTGTTCATGGATGAGTGGACA
TCCAACTCTCTAAGCTGTGAAGACGCCAAGAGAGTTTTACAAGGTATATT
TAACAGTTTTCCCAAGCAGAAGACGAGAGTGCACTTTCTTCAAAAATTCT
ACCAATTGTTGTTACATAAGATGTTCCCTATCAAAGAACGAAAACTGTTA
CTACACGGAAAATCAAATTCAGGAAAAACCACCTGGTTCTACACATTACA
AGAAACCTAAGCCACAGAACAAGATTTGTCAAGCCATTGCAGAAATCGAT
AGGCATATGAAGAAAAAGGGATACGCTATATGTGAAGGTATGGTTTACAA
AAAGCCCAAGGAGTGCAAGTTTACTTATGTGATGTGTTCGAAAATCAAGA
AGTATCTGATGAGATGTCTGAAAATTACAAAGATTGCCGAGCTGTTGACT
CCACATATTGAGAGAGTTACGGAATTGCTGTCTGATCCAGATTGCGGACT
GATAACACCAATGACACGACTGTTCAACGTGATTGAAGTTTTGCCACATG
GTACATGTTTTTTGATAACAGAAAAGCGTTTTGTAAAAATAAAGAAATTT
GCACCAGATCACACACCGAGAACGTTTATTCGATACGAGTATAAGGCTGA
CCGTTGTCCCTATCCAATTCCGTTCATCCAAGCTACAATATCAGAAAAGC
CAACAATTGGGATGGAATCGACAGCTTTTACACTGAATGGCTCAGACGTC
AGAGTGCCGGAGGGTCGTCAAAAACCACATCAACTGACAAACGTAATGAT
AAAGATTGTCCACTCAAGCGTCGTCTTCAAGAAGATGGAATACTAGACCA
GCACCGTTCTTCTGATAGCAGTGACCTCGAAGAAGCACTCACACAACCAA
AGAAAAAGAGATTGAAAATCGCCAACGCGATTCAAATCACCGATTCTGAG
AGCGAAACACCAAACGCAATAACCAAACGCTATTTAGCAGAAATATTGGA
CCGACCTAGCGTCGAGCTCAGTGACTTTACTGATAGTTCATCACACGATT
CAATTGATGTAAAGCCTCTTCTACGATTCAAACAAGCAAATATGGACAAA
GAAGTGGTAACAATATCTACAGATGAAGAAGATGATAAATCCAAAGTTCC
AAAATTGTTCAGTGCTAACGTTAGCGTACCACCTGGCTGAGAAATAACTG
TATGGAAGTATTCCATTACTGTGCAGAAGTCCTAAAAGAAATGCCTCTTT
TCGAATCGTGCACGAACGAAGAGCTATTTAGATTAAAGCGAGAGGAACTT
CGCACAGGCGCCGTCTTCAACGATTACGATGGTTTAGTCGATCAATTACT
GGCAGATTCCGACTTCGAAAGTGAGAGTGCCGGCGAATCAACTTCATCTG
AAACGACGTCTGAAGCTGAGTTGACATTCACAGAACACGAGATGGATTTG
TATTTCTTGGGAGCTGATGAAAACGACCCTCAGAGATGGGAAAAGAAACA
TCCACTTTTCACCACACATCCAGATCGCATTGACGAAGCACTATACCAAC
TTCGAAAGCTGTCTGAGGAGGAGTGGAAAAAAATTCCAATAAATTGTCAA
GATTTAACACGGCGGACTTGTAATGCTATCACAGAAGCACAAGGATGCAA
GAAAAGTGAAATATATGTCAGGCTTTTACATCACAACAAACAAGAGGCCA
AAATTTGGTACGAATACGAACAACCCGAATTCCGATTCATCATCGTCGTC
ATCCAGTTCTTCTTCTGAAGATGAAAACGATGACAACGTTAGACGCAACA
AAGATCACGATGCAGTGTATAATCGTCTCCGTTGTTTTAAAACAAAACCA
CTCCCAGTGAAGGATTCCAGTGTTGCCAGGCTGATTTCAACTGAACACAT
TGCAGGTGTCACGCAAGAAGGCCGATTCGCTGGCCACATGATAAAAGATT
CAACAGAAGTAGTGTTCATGGATGAGTGGACATCCAACTCTCTAAGCTGT
GAAGACGCCAAGAGAGTTTTACAAGGTATATTTAACAGTTTTCCCAAGCA
GAAGACGAGAGTGCACTTTCTTCAAAAATTCTACCAATTGTTGTTACATA
AGATGTTCCCTATCAAAGAACGAAAACTGTTACTACACGGAAAATCAAAT
TCAGGAAAAACCACCTGGTTCTACACATTACAAGAAACCTAAGCCACAGA
ACAAGATTTGTCAAGCCATTGCAGAAATCGATAGGCATATGAAGAAAAAG
GGATACGCTATATGTGAAGGTATGGTTTACAAAAAGCCCAAGGAGTGCAA
GTTTACTTATGTGATGTGTTCGAAAATCAAGAAGTATCTGATGAGATGTC
TGAAAATTACAAAGATTGCCGAGCTGTTGACTCCACATATTGAGAGAGTT
ACGGAATTGCTGTCTGATCCAGATTGCGGACTGATAACACCAATGACACG
ACTGTTCAACGTGATTGAAGTTTTGCCACATGGTACATGTTTTTTGATAA
CAGAAAAGCGTTTTGTAAAAATAAAGAAATTTGCACCAGATCACACACCG
AGAACGTTTATTCGATACGAGTATAAGGCTGACCGTTGTCCCTATCCAAT
TCCGTTCATCCAAGCTACAATATCAGAAAAGCCAACAATTGGGATGGAAT
CGACAGCTTTTACACTGAATGGCTCAGACGTCAGAGTGCCGGAGGGTCGT
CAAAAACCACATCAACTGACAAACGTAATGATAAAGATTGTCCACTCAAG
CGTCGTCTTCAAGAAGATGGAATACTAGACCAGCACCGTTCTTCTGATAG
CAGTGACCTCGAAGAAGCACTCACACAACCAAAGAAAAAGAGATTGAAAA
TCGCCAACGCGATTCAAATCACCGATTCTGAGAGCGAAACACCAAACGCA
ATAACCAAACGCTATTTAGCAGAAATATTGGACCGACCTAGCGTCGAGCT
CAGTGACTTTACTGATAGTTCATCACACGATTCAATTGATGTAAAGCCTC
TTCTACGATTCAAACAAGCAAATATGGACAAAGAAGTGGTAACAATATCT
ACAGATGAAGAAGATGATAAATCCAAAGTTCCAAAATTGTTCAGTGCTAA
CGTTAGCGTACCACCTGGCTGAGAAATAACTGTATGGAAGTATTCCATTA
CTGTGCAGAAGTCCTAAAAGAAATGCCTCTTTTCGAATCGTGCACGAACG
AAGAGCTATTTAGATTAAAGCGAGAGGAACTTCGCACAGGCGCCGTCTTC
AACGATTACGATGGTTTAGTCGATCAATTACTGGCAGATTCCGACTTCGA
AAGTGAGAGTGCCGGCGAATCAACTTCATCTGAAACGACGTCTGAAGCTG
AGTTGACATTCACAGAACACGAGATGGATTTGTATTTCTTGGGAGCTGAT
GAAAACGACCCTCAGAGATGGGAAAAGAAACATCCACTTTTCACCACACA
TCCAGATCGCATTGACGAAGCACTATACCAACTTCGAAAGCTGTCTGAGG
AGGAGTGGAAAAAAATTCCAATAAATTGTCAAGATTTAACACGGCGGACT
TGTAATGCTATCACAGAAGCACAAGGATGCAAGAAAAGTGAAATATATGT
CAGGCTTTTACATCACAACAAACAAGAGGCCAAAATTTGGTACGAATACG
AACAACCCGAATTCCGATTCATCATCGTCGTCATCCAGTTCTTCTTCTGA
AGATGAAAACGATGACAACGTTAGACGCAACAAAGATCACGATGCAGTGT
ATAATCGTCTCCGTTGTTTTAAAACAAAACCACTCCCAGTGAAGGATTCC
AGTGTTGCCAGGCTGATTTCAACTGAACACATTGCAGGTGTCACGCAAGA
AGGCCGATTCGCTGGCCACATGATAAAAGATTCAACAGAAGTAGTGTTCA
TGGATGAGTGGACATCCAACTCTCTAAGCTGTGAAGACGCCAAGAGAGTT
TTACAAGGTATATTTAACAGTTTTCCCAAGCAGAAGACGAGAGTGCACTT
TCTTCAAAAATTCTACCAATTGTTGTTACATAAGATGTTCCCTATCAAAG
AACGAAAACTGTTACTACACGGAAAATCAAATTCAGGAAAAACCACCTGG
TTCTACACATTACAAGAAACCTAAGCCACAGAACAAGATTTGTCAAGCCA
TTGCAGAAATCGATAGGCATATGAAGAAAAAGGGATACGCTATATGTGAA
GGTATGGTTTACAAAAAGCCCAAGGAGTGCAAGTTTACTTATGTGATGTG
TTCGAAAATCAAGAAGTATCTGATGAGATGTCTGAAAATTACAAAGATTG
CCGAGCTGTTGACTCCACATATTGAGAGAGTTACGGAATTGCTGTCTGAT
CCAGATTGCGGACTGATAACACCAATGACACGACTGTTCAACGTGATTGA
AGTTTTGCCACATGGTACATGTTTTTTGATAACAGAAAAGCGTTTTGTAA
AAATAAAGAAATTTGCACCAGATCACACACCGAGAACGTTTATTCGATAC
GAGTATAAGGCTGACCGTTGTCCCTATCCAATTCCGTTCATCCAAGCTAC
AATATCAGAAAAGCCAACAATTGGGATGGAATCGACAGCTTTTACACTGA
ATGGCTCAGACGTCAGAGTGCCGGAGGGTCGTCAAAAACCACATCAACTG
ACAAACGTAATGATAAAGATTGTCCACTCAAGCGTCGTCTTCAAGAAGAT
GGAATACTAGACCAGCACCGTTCTTCTGATAGCAGTGACCTCGAAGAAGC
ACTCACACAACCAAAGAAAAAGAGATTGAAAATCGCCAACGCGATTCAAA
TCACCGATTCTGAGAGCGAAACACCAAACGCAATAACCAAACGCTATTTA
GCAGAAATATTGGACCGACCTAGCGTCGAGCTCAGTGACTTTACTGATAG
TTCATCACACGATTCAATTGATGTAAAGCCTCTTCTACGATTCAAACAAG
CAAATATGGACAAAGAAGTGGTAACAATATCTACAGATGAAGAAGATGAT
AAATCCAAAGTTCCAAAATTGTTCAGTGCTAACGTTAGCGTACCACCTGG
CTGAGAAATAACTGTATGGAAGTATTCCATTACTGTGCAGAAGTCCTAAA
AGAAATGCCTCTTTTCGAATCGTGCACGAACGAAGAGCTATTTAGATTAA
AGCGAGAGGAACTTCGCACAGGCGCCGTCTTCAACGATTACGATGGTTTA
GTCGATCAATTACTGGCAGATTCCGACTTCGAAAGTGAGAGTGCCGGCGA
ATCAACTTCATCTGAAACGACGTCTGAAGCTGAGTTGACATTCACAGAAC
ACGAGATGGATTTGTATTTCTTGGGAGCTGATGAAAACGACCCTCAGAGA
TGGGAAAAGAAACATCCACTTTTCACCACACATCCAGATCGCATTGACGA
AGCACTATACCAACTTCGAAAGCTGTCTGAGGAGGAGTGGAAAAAAATTC
CAATAAATTGTCAAGATTTAACACGGCGGACTTGTAATGCTATCACAGAA
GCACAAGGATGCAAGAAAAGTGAAATATATGTCAGGCTTTTACATCACAA
CAAACAAGAGGCCAAAATTTGGTACGAATACGAACAACCCGAATTCCGAT
TCATCATCGTCGTCATCCAGTTCTTCTTCTGAAGATGAAAACGATGACAA
CGTTAGACGCAACAAAGATCACGATGCAGTGTATAATCGTCTCCGTTGTT
TTAAAACAAAACCACTCCCAGTGAAGGATTCCAGTGTTGCCAGGCTGATT
TCAACTGAACACATTGCAGGTGTCACGCAAGAAGGCCGATTCGCTGGCCA
CATGATAAAAGATTCAACAGAAGTAGTGTTCATGGATGAGTGGACATCCA
ACTCTCTAAGCTGTGAAGACGCCAAGAGAGTTTTACAAGGTATATTTAAC
AGTTTTCCCAAGCAGAAGACGAGAGTGCACTTTCTTCAAAAATTCTACCA
ATTGTTGTTACATAAGATGTTCCCTATCAAAGAACGAAAACTGTTACTAC
ACGGAAAATCAAATTCAGGAAAAACCACCTGGTTCTACACATTACAAGAA
ACCTAAGCCACAGAACAAGATTTGTCAAGCCATTGCAGAAATCGATAGGC
ATATGAAGAAAAAGGGATACGCTATATGTGAAGGTATGGTTTACAAAAAG
CCCAAGGAGTGCAAGTTTACTTATGTGATGTGTTCGAAAATCAAGAAGTA
TCTGATGAGATGTCTGAAAATTACAAAGATTGCCGAGCTGTTGACTCCAC
ATATTGAGAGAGTTACGGAATTGCTGTCTGATCCAGATTGCGGACTGATA
ACACCAATGACACGACTGTTCAACGTGATTGAAGTTTTGCCACATGGTAC
ATGTTTTTTGATAACAGAAAAGCGTTTTGTAAAAATAAAGAAATTTGCAC
CAGATCACACACCGAGAACGTTTATTCGATACGAGTATAAGGCTGACCGT
TGTCCCTATCCAATTCCGTTCATCCAAGCTACAATATCAGAAAAGCCAAC
AATTGGGATGGAATCGACAGCTTTTACACTGAATGGCTCAGACGTCAGAG
TGCCGGAGGGTCGTCAAAAACCACATCAACTGACAAACGTAATGATAAAG
ATTGTCCACTCAAGCGTCGTCTTCAAGAAGATGGAATACTAGACCAGCAC
CGTTCTTCTGATAGCAGTGACCTCGAAGAAGCACTCACACAACCAAAGAA
AAAGAGATTGAAAATCGCCAACGCGATTCAAATCACCGATTCTGAGAGCG
AAACACCAAACGCAATAACCAAACGCTATTTAGCAGAAATATTGGACCGA
CCTAGCGTCGAGCTCAGTGACTTTACTGATAGTTCATCACACGATTCAAT
TGATGTAAAGCCTCTTCTACGATTCAAACAAGCAAATATGGACAAAGAAG
TGGTAACAATATCTACAGATGAAGAAGATGATAAATCCAAAGTTCCAAAA
TTGTTCAGTGCTAACGTTAGCGTACCACCTGGCTGAGAAATAACTGTATG
GAAGTATTCCATTACTGTGCAGAAGTCCTAAAAGAAATGCCTCTTTTCGA
ATCGTGCACGAACGAAGAGCTATTTAGATTAAAGCGAGAGGAACTTCGCA
CAGGCGCCGTCTTCAACGATTACGATGGTTTAGTCGATCAATTACTGGCA
GATTCCGACTTCGAAAGTGAGAGTGCCGGCGAATCAACTTCATCTGAAAC
GACGTCTGAAGCTGAGTTGACATTCACAGAACACGAGATGGATTTGTATT
TCTTGGGAGCTGATGAAAACGACCCTCAGAGATGGGAAAAGAAACATCCA
CTTTTCACCACACATCCAGATCGCATTGACGAAGCACTATACCAACTTCG
AAAGCTGTCTGAGGAGGAGTGGAAAAAAATTCCAATAAATTGTCAAGATT
TAACACGGCGGACTTGTAATGCTATCACAGAAGCACAAGGATGCAAGAAA
AGTGAAATATATGTCAGGCTTTTACATCACAACAAACAAGAGGCCAAAAT
TTGGTACGAATACGAACAACCCGAATTCCGATTCATCATCGTCGTCATCC
AGTTCTTCTTCTGAAGATGAAAACGATGACAACGTTAGACGCAACAAAGA
TCACGATGCAGTGTATAATCGTCTCCGTTGTTTTAAAACAAAACCACTCC
CAGTGAAGGATTCCAGTGTTGCCAGGCTGATTTCAACTGAACACATTGCA
GGTGTCACGCAAGAAGGCCGATTCGCTGGCCACATGATAAAAGATTCAAC
AGAAGTAGTGTTCATGGATGAGTGGACATCCAACTCTCTAAGCTGTGAAG
ACGCCAAGAGAGTTTTACAAGGTATATTTAACAGTTTTCCCAAGCAGAAG
ACGAGAGTGCACTTTCTTCAAAAATTCTACCAATTGTTGTTACATAAGAT
GTTCCCTATCAAAGAACGAAAACTGTTACTACACGGAAAATCAAATTCAG
GAAAAACCACCTGGTTCTACACATTACAAGAAACCTAAGCCACAGAACAA
GATTTGTCAAGCCATTGCAGAAATCGATAGGCATATGAAGAAAAAGGGAT
ACGCTATATGTGAAGGTATGGTTTACAAAAAGCCCAAGGAGTGCAAGTTT
ACTTATGTGATGTGTTCGAAAATCAAGAAGTATCTGATGAGATGTCTGAA
AATTACAAAGATTGCCGAGCTGTTGACTCCACATATTGAGAGAGTTACGG
AATTGCTGTCTGATCCAGATTGCGGACTGATAACACCAATGACACGACTG
TTCAACGTGATTGAAGTTTTGCCACATGGTACATGTTTTTTGATAACAGA
AAAGCGTTTTGTAAAAATAAAGAAATTTGCACCAGATCACACACCGAGAA
CGTTTATTCGATACGAGTATAAGGCTGACCGTTGTCCCTATCCAATTCCG
TTCATCCAAGCTACAATATCAGAAAAGCCAACAATTGGGATGGAATCGAC
AGCTTTTACACTGAATGGCTCAGACGTCAGAGTGCCGGAGGGTCGTCAAA
AACCACATCAACTGACAAACGTAATGATAAAGATTGTCCACTCAAGCGTC
GTCTTCAAGAAGATGGAATACTAGACCAGCACCGTTCTTCTGATAGCAGT
GACCTCGAAGAAGCACTCACACAACCAAAGAAAAAGAGATTGAAAATCGC
CAACGCGATTCAAATCACCGATTCTGAGAGCGAAACACCAAACGCAATAA
CCAAACGCTATTTAGCAGAAATATTGGACCGACCTAGCGTCGAGCTCAGT
GACTTTACTGATAGTTCATCACACGATTCAATTGATGTAAAGCCTCTTCT
ACGATTCAAACAAGCAAATATGGACAAAGAAGTGGTAACAATATCTACAG
ATGAAGAAGATGATAAATCCAAAGTTCCAAAATTGTTCAGTGCTAACGTT
AGCGTACCACCTGGCTGAGAAATAACTGTATGGAAGTATTCCATTACTGT
GCAGAAGTCCTAAAAGAAATGCCTCTTTTCGAATCGTGCACGAACGAAGA
GCTATTTAGATTAAAGCGAGAGGAACTTCGCACAGGCGCCGTCTTCAACG
ATTACGATGGTTTAGTCGATCAATTACTGGCAGATTCCGACTTCGAAAGT
GAGAGTGCCGGCGAATCAACTTCATCTGAAACGACGTCTGAAGCTGAGTT
GACATTCACAGAACACGAGATGGATTTGTATTTCTTGGGAGCTGATGAAA
ACGACCCTCAGAGATGGGAAAAGAAACATCCACTTTTCACCACACATCCA
GATCGCATTGACGAAGCACTATACCAACTTCGAAAGCTGTCTGAGGAGGA
GTGGAAAAAAATTCCAATAAATTGTCAAGATTTAACACGGCGGACTTGTA
ATGCTATCACAGAAGCACAAGGATGCAAGAAAAGTGAAATATATGTCAGG
CTTTTACATCACAACAAACAAGAGGCCAAAATTTGGTACGAATACGAACA
ACCCGAATTCCGATTCATCATCGTCGTCATCCAGTTCTTCTTCTGAAGAT
GAAAACGATGACAACGTTAGACGCAACAAAGATCACGATGCAGTGTATAA
TCGTCTCCGTTGTTTTAAAACAAAACCACTCCCAGTGAAGGATTCCAGTG
TTGCCAGGCTGATTTCAACTGAACACATTGCAGGTGTCACGCAAGAAGGC
CGATTCGCTGGCCACATGATAAAAGATTCAACAGAAGTAGTGTTCATGGA
TGAGTGGACATCCAACTCTCTAAGCTGTGAAGACGCCAAGAGAGTTTTAC
AAGGTATATTTAACAGTTTTCCCAAGCAGAAGACGAGAGTGCACTTTCTT
CAAAAATTCTACCAATTGTTGTTACATAAGATGTTCCCTATCAAAGAACG
AAAACTGTTACTACACGGAAAATCAAATTCAGGAAAAACCACCTGGTTCT
ACACATTACAAGAAACCTAAGCCACAGAACAAGATTTGTCAAGCCATTGC
AGAAATCGATAGGCATATGAAGAAAAAGGGATACGCTATATGTGAAGGTA
TGGTTTACAAAAAGCCCAAGGAGTGCAAGTTTACTTATGTGATGTGTTCG
AAAATCAAGAAGTATCTGATGAGATGTCTGAAAATTACAAAGATTGCCGA
GCTGTTGACTCCACATATTGAGAGAGTTACGGAATTGCTGTCTGATCCAG
ATTGCGGACTGATAACACCAATGACACGACTGTTCAACGTGATTGAAGTT
TTGCCACATGGTACATGTTTTTTGATAACAGAAAAGCGTTTTGTAAAAAT
AAAGAAATTTGCACCAGATCACACACCGAGAACGTTTATTCGATACGAGT
ATAAGGCTGACCGTTGTCCCTATCCAATTCCGTTCATCCAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039843-exon-sc0002217-1575043694:11912..12343 | TCONS_00039843-exon-sc0002217-1575043694:11912..12343 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1575043694:11617..11775 | TCONS_00039843-exon-sc0002217-1575043694:11617..11775 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1575043694:11348..11494 | TCONS_00039843-exon-sc0002217-1575043694:11348..11494 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1575043694:10953..11219 | TCONS_00039843-exon-sc0002217-1575043694:10953..11219 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1575043694:9969..10398 | TCONS_00039843-exon-sc0002217-1575043694:9969..10398 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1575043694:9274..9773 | TCONS_00039843-exon-sc0002217-1575043694:9274..9773 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1510915933:11912..12343 | TCONS_00039843-exon-sc0002217-1510915933:11912..12343 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1510915933:11617..11775 | TCONS_00039843-exon-sc0002217-1510915933:11617..11775 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1510915933:11348..11494 | TCONS_00039843-exon-sc0002217-1510915933:11348..11494 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1510915933:10953..11219 | TCONS_00039843-exon-sc0002217-1510915933:10953..11219 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1510915933:9969..10398 | TCONS_00039843-exon-sc0002217-1510915933:9969..10398 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1510915933:9274..9773 | TCONS_00039843-exon-sc0002217-1510915933:9274..9773 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1491911889:11912..12343 | TCONS_00039843-exon-sc0002217-1491911889:11912..12343 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1491911889:11617..11775 | TCONS_00039843-exon-sc0002217-1491911889:11617..11775 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1491911889:11348..11494 | TCONS_00039843-exon-sc0002217-1491911889:11348..11494 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1491911889:10953..11219 | TCONS_00039843-exon-sc0002217-1491911889:10953..11219 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1491911889:9969..10398 | TCONS_00039843-exon-sc0002217-1491911889:9969..10398 | Clytia hemisphaerica | exon |
| TCONS_00039843-exon-sc0002217-1491911889:9274..9773 | TCONS_00039843-exon-sc0002217-1491911889:9274..9773 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002217 | supercontig | sc0002217:9274..12343 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001177 | DNA_helicase_E1_C_Papillomavir |
| IPR027417 | P-loop_NTPase |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004003 | ATP-dependent DNA helicase activity |
| GO:0005524 | ATP binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006260 |
DNA replication |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004003 |
ATP-dependent DNA helicase activity |
| molecular_function |
GO:0003677 |
DNA binding |
Blast
The following BLAST results are available for this feature:
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