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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00039843-protein ID=TCONS_00039843-protein|Name=TCONS_00039843-protein|organism=Clytia hemisphaerica|type=polypeptide|length=644bp
KPKPQNKICQAIAEIDRHMKKKGYAICEGMVYKKPKECKFTYVMCSKIKK
YLMRCLKITKIAELLTPHIERVTELLSDPDCGLITPMTRLFNVIEVLPHG
TCFLITEKRFVKIKKFAPDHTPRTFIRYEYKADRCPYPIPFIQGIFNSFP
KQKTRVHFLQKFYQLLLHKMFPIKERKLLLHGKSNSGKTTWFYTLQGLIS
TEHIAGVTQEGRFAGHMIKDSTEVVFMDEWTSNSLSCEDAKRVLQGGLVM
LSQKHKDARKVKYMSGFYITTNKRPKFGTNTNNPNSDSSSSSSSSSSEDE
NDDNVRRNKDHDAVYNRLRCFKTKPLPVKDSSVATWLRNNCMEVFHYCAE
VLKEMPLFESCTNEELFRLKREELRTGAVFNDYDGLVDQLLADSDFESES
AGESTSSETTSEAELTFTEHEMDLYFLGADENDPQRWEKKHPLFTTHPDR
IDEALYQLRKLSEEEWKKIPINCQDLTRYNIRKANNWDGIDSFYTEWLRR
QSAGGSSKTTSTDKRNDKDCPLKRRLQEDGILDQHRSSDSSDLEEALTQP
KKKRLKIANAIQITDSESETPNAITKRYLAEILDRPSVELSDFTDSSSHD
SIDVKPLLRFKQANMDKEVVTISTDEEDDKSKVPKLFSANVSVP Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR001177 | DNA_helicase_E1_C_Papillomavir |
| IPR027417 | P-loop_NTPase |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004003 | ATP-dependent DNA helicase activity |
| GO:0005524 | ATP binding |
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006260 | DNA replication |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006260 |
DNA replication |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004003 |
ATP-dependent DNA helicase activity |
| molecular_function |
GO:0003677 |
DNA binding |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001177 | DNA helicase E1 protein, C-terminal, Papillomavirus | PFAM | PF00519 | PPV_E1_C | coord: 155..273
e-value: 2.8E-4
score: 19.8 |
| None | No IPR available | GENE3D | 3.40.50.300 | | coord: 120..338
e-value: 2.9E-6
score: 26.3 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 622..644 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 503..549 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 274..309 |
| IPR027417 | P-loop containing nucleoside triphosphate hydrolase | SUPERFAMILY | 52540 | P-loop containing nucleoside triphosphate hydrolases | coord: 158..278 |
Blast
The following BLAST results are available for this feature:
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