TCONS_00039614 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039614
Unique NameTCONS_00039614
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1428

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039614 ID=TCONS_00039614|Name=TCONS_00039614|organism=Clytia hemisphaerica|type=transcript|length=1428bp
CAAACAACCATCGAAATAAGGCAGCTTGCTTGTAATGCATCTGATATGTA
TCGAAGAGAGGGGATTCCCATCCTGGCCAAAGCAGTTGAGATAATGACAC
AAAAAGAAGTAGAAGAAGGTTCAACAGCTGTAGTCGATCAAAAGTCAGGG
CTCAAACTTTCCATATTGAATATGATTAAGCTTACTGGAAAGTTTTTGAT
TGGGCACTATCTGATTAATAATCAAGACTGCAGATCAGATTTTGTGGTGA
TGTTCCTTAAGGTCTTGAAGAGTTTTGAAAACGATCTTTTCGGAGATGCG
TATTATGCGGTCAGTTACCAACGAAATACCGTCTTAAGAAAACCCGTCCA
GCTCCCAAAAGAAGAAGATGTACAGCTACTTTTGCAAGAGTGTGACTCAA
CAATGGCCAAAGTGGACCCATTATCACTGAAGATATCTGATGCATCTTAT
TGTAATCTTAGAGCTGCCGTTGTTACATGCTTAATTGTATTTAACGCAAG
AAGGGGTGGCGAACCAGGCAGACTTTCAATAAGCCAGTGGGAAGAAGCGC
TGAAAGGCGAGTGGGTTGACCACGATGACGTCCCAGATTTCGATAATGAT
ACTATGCTGATTACCTACCAGACAGGAAAAGGAAACCATCATTTGGTACC
AGTGATATTCCCTTTTGAAACGCATCGATCTATCAAGCATTTAGCTGATC
CTGAAGTCAGAGCTGCTGCTGGTGTTGCTAAAAACAATTCATTTCTATTT
CCTGCAACCATGAATGGCGAAGGTCATGCAAGTGGTTGGCATTCTATTAA
CGAGATTCTTGAAAAGCTTTCACTCAAGGGTGCTTTTAATCCAACAAAGA
ACAGGCACCGTGTCGCCTCACTTTTGGCAAGATTAGAACTTTCAGACAAA
GAAAAAGAGTTGGTATATAAACACTTCGGACACTCTGAGATGGTCAACGA
AGGCATTTATCAAGCGGCTGGGGGTACTCAACAACTCCAATCCACTGGAG
GTCTCCTGAAGCAGATTTATGAGTCCACAAAGAATCTTGTAAAATCTAAA
AACCCTAATGTCTCGACTGACGCATCGAGAAAAGCCAAAGTCTCAACAGA
CGTATCGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGAAAAGCCAAAG
TCTCAACTGACGTATCGAGAAAAGCCAAAGTCTCAACTGAGGAATCAAAA
TCTGAAgagAGACCGAAGAAGCGAGAAAATCCAAAACGCAACAAAGAAAA
AGCGAATTACATTGAACGTGTGGAAGGAGAGTCGGATTCAGAATCAGAAG
GAGAGGAATTTCAGCCTGAAGgtgaaagtgaagaagaagtATCCGACGAA
GAAGACAATGTGAAAGGTATAATACGGTCTAATTGTGTAAAAAATGTGCA
CGAAGGCGTACAAGCATGAGACTTTACA
Run BLAST on NCBI

protein sequence of TCONS_00039614-protein

>TCONS_00039614-protein ID=TCONS_00039614-protein|Name=TCONS_00039614-protein|organism=Clytia hemisphaerica|type=polypeptide|length=472bp
QTTIEIRQLACNASDMYRREGIPILAKAVEIMTQKEVEEGSTAVVDQKSG
LKLSILNMIKLTGKFLIGHYLINNQDCRSDFVVMFLKVLKSFENDLFGDA
YYAVSYQRNTVLRKPVQLPKEEDVQLLLQECDSTMAKVDPLSLKISDASY
CNLRAAVVTCLIVFNARRGGEPGRLSISQWEEALKGEWVDHDDVPDFDND
TMLITYQTGKGNHHLVPVIFPFETHRSIKHLADPEVRAAAGVAKNNSFLF
PATMNGEGHASGWHSINEILEKLSLKGAFNPTKNRHRVASLLARLELSDK
EKELVYKHFGHSEMVNEGIYQAAGGTQQLQSTGGLLKQIYESTKNLVKSK
NPNVSTDASRKAKVSTDVSRKAKVSTDVSRKAKVSTDVSRKAKVSTEESK
SEERPKKRENPKRNKEKANYIERVEGESDSESEGEEFQPEGESEEEVSDE
EDNVKGIIRSNCVKNVHEGVQA
Run BLAST on NCBI

transcript from alignment at sc0002149:26018..28936-

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039614 ID=TCONS_00039614|Name=TCONS_00039614|organism=Clytia hemisphaerica|type=transcript|length=2919bp|location=Sequence derived from alignment at sc0002149:26018..28936- (Clytia hemisphaerica)
CAAACAACCATCGAAATAAGGCAGCTTGCTTGTAATGCATCTGATATGTA
TCGAAGAGAGGGGATTCCCATCCTGGCCAAAGCAGTTGAGATAATGACAC
AAAAAGAAGTAGAAGAAGGTTCAACAGCTGTAGTCGATCAAAAGTCAGGG
CTCAAACTTTCCATATTGAATATGATTAAGCTTACTGGAAAGTTTTTGAT
TGGGCACTATCTGATTAATAATCAAGACTGCAGATCAGATTTTGTGGTGA
TGTTCCTTAAGGTATGTAATATGATGTATTTTTCATTTTCAGAACCAAAA
CCAAATAACTAAAGTCATCAAAATATCTGAATCAAGTCTAGTGTAGTTAA
ATCAATTCAATTTGGAATTTAATCAAATTATGTCTAGTGAACATATTTTT
CAATTTTTTGAGCTGGAATTTATTGTAGGATTTAATTGGGATTTCTGCGA
AATTTTTGGCCTACAGAAACTTCTATCTACTCAATTGTTTTTCTCTTTCG
TCATAACGATATAACTCGTAATAAGGATAAGGCTTGTTGACAAAAAAAGC
TGTACTTAAAACAACAATGTATCAATAGACCACTGGAAAACTATTCTTAC
TGTTCTTATTTGTAGGTCTTGAAGAGTTTTGAAAACGATCTTTTCGGAGA
TGCGTATTATGCGGTCAGTTACCAACGAAATACCGTCTTAAGAAAACCCG
TCCAGCTCCCAAAAGAAGAAGATGTACAGCTACTTTTGCAAGAGTGTGAC
TCAACAATGGCCAAAGTGGACCCATTATCACTGAAGATATCTGATGCATC
TTATTGTAATCTTAGAGCTGCCGTTGTTACATGCTTAATTGTATTTAACG
CAAGAAGGGGTGGCGAACCAGGCAGACTTTCAATAAGCCAGTGGGAAGAA
GCGCTGAAAGGCGAGTGGGTTGACCACGATGACGTCCCAGATTTCGATAA
TGATACTATGCTGATTACCTACCAGACAGGAAAAGGAAACCATCATTTGG
TACCAGTGATATTCCCTTTTGAAACGCATCGATCTATCAAGCATTTAGCT
GATCCTGAAGTCAGAGCTGCTGCTGGTGTTGCTAAAAACAATTCATTTCT
ATTTCCTGCAACCATGAATGGCGAAGGTCATGCAAGTGGTTGGCATTCTA
TTAACGAGATTCTTGAAAAGCTTTCACTCAAGGGTGCTTTTAATCCAACA
AAGAACAGGCACCGTGTCGCCTCACTTTTGGCAAGATTAGAACTTTCAGA
CAAAGAAAAAGAGTTGGTATATAAACACTTCGGACACTCTGAGATGGTCA
ACGAAGGCATTTATCAAGCGGCTGGGGGTACTCAACAACTCCAATCCACT
GGAGGTCTCCTGAAGCAGATTTATGAGTCCACAAAGGTAACTAGAATTTA
TATTTTTGCCTTATTTCAATCTCGTCCCCGTGTATCCCAGCCTTTATCTA
CGTTACTGACGGACGCCAGAAAATACCCTGGTGTAGGGTTCTCAAAAGAA
TGCCGGGGTATTCATGATATGCAACACTGGAAAGTTTTCTGAGAATTTTC
AAAAATTTTAAACCCAATACGTCTATTGTTTAAGTGGTACGTATTGTGTA
GAATATTTTAAAAGCTCTTAGAAGGCTCACCAGTGTTGCATATCATGAAT
TATTTAGCGCCATATGTAAGCAACAAAAAGAGCTGATTTTGCGATGGGAA
CGAGCTTGGCCTTACTTTAGAGACCCACTTTTTTTGCATGAAACTAATTG
TTTCTAAGAGAAATATTTGAAAGTGTTATGTTGCTTTTCTAGCATTTCAT
TTTTTTCCCTTAAATTTAACCATTTTATCCAAAATGAGGTGGTAAATAAT
AAATCTTCTAAGGTTATTTATCATCAGTTCCCTCTCTTTTAGAATCTTGT
AAAATCTAAAAACCCTAATGTCTCGACTGACGCATCGAGAAAAGCCAAAG
TCTCAACAGACGTATCGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGA
AAAGCCAAAGTCTCAACTGACGTATCGAGAAAAGCCAAAGTCTCAACTGA
GGAATCAAAATCTGAAGGTATTTTAATTTTCATTCTGCTGATTATCTCAG
AAACTGTGAAAAGTCTCACAACCTTAAGCTTCACATACCAGATGTCATAT
TGAAATGATGATCCCAGCGAAAATTTCAACATAATTTCACTAGCAGTTCT
GAAGGCATATCCGCTCCAAAACTTAAGTGAGTCTGTTTTTTTTCTTCTTT
TTTCAGAGAGACCGAAGAAGCGAGAAAATCCAAAACGCAACAAAGAAAAA
GGTACTGTTTCATTTACAACAAACGTCTAGATCTAACACTTATTTTTCGA
TTTTTTTGTAACTTCAGAACTTTCTTTCCTCGCTTTCAAAATTTTGAATT
TTTTTCCGACCATTACTTTACAAACGACAGTTTTCGTCAACTTTCTTGGT
TATATTTTACTGTATTGTTTTTTCTTACTCAGCGAATTACATTGAACGTG
TGGAAGGAGAGTCGGATTCAGGTATGTTTTAAAATATTTCTTTTGGTTAT
TCCTTTTTCTCTTCGTGATTGTTGATTCTATAGCGGGACACTTTTACAAT
AAAGTTAACAATTTATGCAACCATGAACATGATGCAACTAAATGTTGTAC
TACCCTATATTCATATAGGGGCTTGAGTTGATTCAACTCGCTTAGCAAGG
TTATTACTTTCAATTGGGAAAGCTTTTATCAAATTCTTTTCTGTCACAAT
TAATTCCTTTTACTCGTTTCTTTGATTTCAAGAATCAGAAGGAGAGGAAT
TTCAGCCTGAAGGTGAAAGTGAAGAAGAAGTATCCGACGAAGAAGACAAT
GTGAAAGGTATAATACGGTCTAATTGTGTAAAAAATGTGCACGAAGGCGT
ACAAGCATGAGACTTTACA

Coding sequence (CDS) from alignment at sc0002149:26018..28936-

>TCONS_00039614 ID=TCONS_00039614|Name=TCONS_00039614|organism=Clytia hemisphaerica|type=CDS|length=8514bp|location=Sequence derived from alignment at sc0002149:26018..28936- (Clytia hemisphaerica)
AATCAGAAGGAGAGGAATTTCAGCCTGAAGGTGAAAGTGAAGAAGAAGTA
TCCGACGAAGAAGACAATGTGAAAGGTATAATACGGTCTAATTGTGTAAA
AAATGTGCACGAAGGCGTACAAGCATGACGAATTACATTGAACGTGTGGA
AGGAGAGTCGGATTCAGAGAGACCGAAGAAGCGAGAAAATCCAAAACGCA
ACAAAGAAAAAGAATCTTGTAAAATCTAAAAACCCTAATGTCTCGACTGA
CGCATCGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGAAAAGCCAAAG
TCTCAACAGACGTATCGAGAAAAGCCAAAGTCTCAACTGACGTATCGAGA
AAAGCCAAAGTCTCAACTGAGGAATCAAAATCTGAAGGTCTTGAAGAGTT
TTGAAAACGATCTTTTCGGAGATGCGTATTATGCGGTCAGTTACCAACGA
AATACCGTCTTAAGAAAACCCGTCCAGCTCCCAAAAGAAGAAGATGTACA
GCTACTTTTGCAAGAGTGTGACTCAACAATGGCCAAAGTGGACCCATTAT
CACTGAAGATATCTGATGCATCTTATTGTAATCTTAGAGCTGCCGTTGTT
ACATGCTTAATTGTATTTAACGCAAGAAGGGGTGGCGAACCAGGCAGACT
TTCAATAAGCCAGTGGGAAGAAGCGCTGAAAGGCGAGTGGGTTGACCACG
ATGACGTCCCAGATTTCGATAATGATACTATGCTGATTACCTACCAGACA
GGAAAAGGAAACCATCATTTGGTACCAGTGATATTCCCTTTTGAAACGCA
TCGATCTATCAAGCATTTAGCTGATCCTGAAGTCAGAGCTGCTGCTGGTG
TTGCTAAAAACAATTCATTTCTATTTCCTGCAACCATGAATGGCGAAGGT
CATGCAAGTGGTTGGCATTCTATTAACGAGATTCTTGAAAAGCTTTCACT
CAAGGGTGCTTTTAATCCAACAAAGAACAGGCACCGTGTCGCCTCACTTT
TGGCAAGATTAGAACTTTCAGACAAAGAAAAAGAGTTGGTATATAAACAC
TTCGGACACTCTGAGATGGTCAACGAAGGCATTTATCAAGCGGCTGGGGG
TACTCAACAACTCCAATCCACTGGAGGTCTCCTGAAGCAGATTTATGAGT
CCACAAAGCAAACAACCATCGAAATAAGGCAGCTTGCTTGTAATGCATCT
GATATGTATCGAAGAGAGGGGATTCCCATCCTGGCCAAAGCAGTTGAGAT
AATGACACAAAAAGAAGTAGAAGAAGGTTCAACAGCTGTAGTCGATCAAA
AGTCAGGGCTCAAACTTTCCATATTGAATATGATTAAGCTTACTGGAAAG
TTTTTGATTGGGCACTATCTGATTAATAATCAAGACTGCAGATCAGATTT
TGTGGTGATGTTCCTTAAGAATCAGAAGGAGAGGAATTTCAGCCTGAAGG
TGAAAGTGAAGAAGAAGTATCCGACGAAGAAGACAATGTGAAAGGTATAA
TACGGTCTAATTGTGTAAAAAATGTGCACGAAGGCGTACAAGCATGACGA
ATTACATTGAACGTGTGGAAGGAGAGTCGGATTCAGAGAGACCGAAGAAG
CGAGAAAATCCAAAACGCAACAAAGAAAAAGAATCTTGTAAAATCTAAAA
ACCCTAATGTCTCGACTGACGCATCGAGAAAAGCCAAAGTCTCAACAGAC
GTATCGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGAAAAGCCAAAGT
CTCAACTGACGTATCGAGAAAAGCCAAAGTCTCAACTGAGGAATCAAAAT
CTGAAGGTCTTGAAGAGTTTTGAAAACGATCTTTTCGGAGATGCGTATTA
TGCGGTCAGTTACCAACGAAATACCGTCTTAAGAAAACCCGTCCAGCTCC
CAAAAGAAGAAGATGTACAGCTACTTTTGCAAGAGTGTGACTCAACAATG
GCCAAAGTGGACCCATTATCACTGAAGATATCTGATGCATCTTATTGTAA
TCTTAGAGCTGCCGTTGTTACATGCTTAATTGTATTTAACGCAAGAAGGG
GTGGCGAACCAGGCAGACTTTCAATAAGCCAGTGGGAAGAAGCGCTGAAA
GGCGAGTGGGTTGACCACGATGACGTCCCAGATTTCGATAATGATACTAT
GCTGATTACCTACCAGACAGGAAAAGGAAACCATCATTTGGTACCAGTGA
TATTCCCTTTTGAAACGCATCGATCTATCAAGCATTTAGCTGATCCTGAA
GTCAGAGCTGCTGCTGGTGTTGCTAAAAACAATTCATTTCTATTTCCTGC
AACCATGAATGGCGAAGGTCATGCAAGTGGTTGGCATTCTATTAACGAGA
TTCTTGAAAAGCTTTCACTCAAGGGTGCTTTTAATCCAACAAAGAACAGG
CACCGTGTCGCCTCACTTTTGGCAAGATTAGAACTTTCAGACAAAGAAAA
AGAGTTGGTATATAAACACTTCGGACACTCTGAGATGGTCAACGAAGGCA
TTTATCAAGCGGCTGGGGGTACTCAACAACTCCAATCCACTGGAGGTCTC
CTGAAGCAGATTTATGAGTCCACAAAGCAAACAACCATCGAAATAAGGCA
GCTTGCTTGTAATGCATCTGATATGTATCGAAGAGAGGGGATTCCCATCC
TGGCCAAAGCAGTTGAGATAATGACACAAAAAGAAGTAGAAGAAGGTTCA
ACAGCTGTAGTCGATCAAAAGTCAGGGCTCAAACTTTCCATATTGAATAT
GATTAAGCTTACTGGAAAGTTTTTGATTGGGCACTATCTGATTAATAATC
AAGACTGCAGATCAGATTTTGTGGTGATGTTCCTTAAGAATCAGAAGGAG
AGGAATTTCAGCCTGAAGGTGAAAGTGAAGAAGAAGTATCCGACGAAGAA
GACAATGTGAAAGGTATAATACGGTCTAATTGTGTAAAAAATGTGCACGA
AGGCGTACAAGCATGACGAATTACATTGAACGTGTGGAAGGAGAGTCGGA
TTCAGAGAGACCGAAGAAGCGAGAAAATCCAAAACGCAACAAAGAAAAAG
AATCTTGTAAAATCTAAAAACCCTAATGTCTCGACTGACGCATCGAGAAA
AGCCAAAGTCTCAACAGACGTATCGAGAAAAGCCAAAGTCTCAACAGACG
TATCGAGAAAAGCCAAAGTCTCAACTGACGTATCGAGAAAAGCCAAAGTC
TCAACTGAGGAATCAAAATCTGAAGGTCTTGAAGAGTTTTGAAAACGATC
TTTTCGGAGATGCGTATTATGCGGTCAGTTACCAACGAAATACCGTCTTA
AGAAAACCCGTCCAGCTCCCAAAAGAAGAAGATGTACAGCTACTTTTGCA
AGAGTGTGACTCAACAATGGCCAAAGTGGACCCATTATCACTGAAGATAT
CTGATGCATCTTATTGTAATCTTAGAGCTGCCGTTGTTACATGCTTAATT
GTATTTAACGCAAGAAGGGGTGGCGAACCAGGCAGACTTTCAATAAGCCA
GTGGGAAGAAGCGCTGAAAGGCGAGTGGGTTGACCACGATGACGTCCCAG
ATTTCGATAATGATACTATGCTGATTACCTACCAGACAGGAAAAGGAAAC
CATCATTTGGTACCAGTGATATTCCCTTTTGAAACGCATCGATCTATCAA
GCATTTAGCTGATCCTGAAGTCAGAGCTGCTGCTGGTGTTGCTAAAAACA
ATTCATTTCTATTTCCTGCAACCATGAATGGCGAAGGTCATGCAAGTGGT
TGGCATTCTATTAACGAGATTCTTGAAAAGCTTTCACTCAAGGGTGCTTT
TAATCCAACAAAGAACAGGCACCGTGTCGCCTCACTTTTGGCAAGATTAG
AACTTTCAGACAAAGAAAAAGAGTTGGTATATAAACACTTCGGACACTCT
GAGATGGTCAACGAAGGCATTTATCAAGCGGCTGGGGGTACTCAACAACT
CCAATCCACTGGAGGTCTCCTGAAGCAGATTTATGAGTCCACAAAGCAAA
CAACCATCGAAATAAGGCAGCTTGCTTGTAATGCATCTGATATGTATCGA
AGAGAGGGGATTCCCATCCTGGCCAAAGCAGTTGAGATAATGACACAAAA
AGAAGTAGAAGAAGGTTCAACAGCTGTAGTCGATCAAAAGTCAGGGCTCA
AACTTTCCATATTGAATATGATTAAGCTTACTGGAAAGTTTTTGATTGGG
CACTATCTGATTAATAATCAAGACTGCAGATCAGATTTTGTGGTGATGTT
CCTTAAGAATCAGAAGGAGAGGAATTTCAGCCTGAAGGTGAAAGTGAAGA
AGAAGTATCCGACGAAGAAGACAATGTGAAAGGTATAATACGGTCTAATT
GTGTAAAAAATGTGCACGAAGGCGTACAAGCATGACGAATTACATTGAAC
GTGTGGAAGGAGAGTCGGATTCAGAGAGACCGAAGAAGCGAGAAAATCCA
AAACGCAACAAAGAAAAAGAATCTTGTAAAATCTAAAAACCCTAATGTCT
CGACTGACGCATCGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGAAAA
GCCAAAGTCTCAACAGACGTATCGAGAAAAGCCAAAGTCTCAACTGACGT
ATCGAGAAAAGCCAAAGTCTCAACTGAGGAATCAAAATCTGAAGGTCTTG
AAGAGTTTTGAAAACGATCTTTTCGGAGATGCGTATTATGCGGTCAGTTA
CCAACGAAATACCGTCTTAAGAAAACCCGTCCAGCTCCCAAAAGAAGAAG
ATGTACAGCTACTTTTGCAAGAGTGTGACTCAACAATGGCCAAAGTGGAC
CCATTATCACTGAAGATATCTGATGCATCTTATTGTAATCTTAGAGCTGC
CGTTGTTACATGCTTAATTGTATTTAACGCAAGAAGGGGTGGCGAACCAG
GCAGACTTTCAATAAGCCAGTGGGAAGAAGCGCTGAAAGGCGAGTGGGTT
GACCACGATGACGTCCCAGATTTCGATAATGATACTATGCTGATTACCTA
CCAGACAGGAAAAGGAAACCATCATTTGGTACCAGTGATATTCCCTTTTG
AAACGCATCGATCTATCAAGCATTTAGCTGATCCTGAAGTCAGAGCTGCT
GCTGGTGTTGCTAAAAACAATTCATTTCTATTTCCTGCAACCATGAATGG
CGAAGGTCATGCAAGTGGTTGGCATTCTATTAACGAGATTCTTGAAAAGC
TTTCACTCAAGGGTGCTTTTAATCCAACAAAGAACAGGCACCGTGTCGCC
TCACTTTTGGCAAGATTAGAACTTTCAGACAAAGAAAAAGAGTTGGTATA
TAAACACTTCGGACACTCTGAGATGGTCAACGAAGGCATTTATCAAGCGG
CTGGGGGTACTCAACAACTCCAATCCACTGGAGGTCTCCTGAAGCAGATT
TATGAGTCCACAAAGCAAACAACCATCGAAATAAGGCAGCTTGCTTGTAA
TGCATCTGATATGTATCGAAGAGAGGGGATTCCCATCCTGGCCAAAGCAG
TTGAGATAATGACACAAAAAGAAGTAGAAGAAGGTTCAACAGCTGTAGTC
GATCAAAAGTCAGGGCTCAAACTTTCCATATTGAATATGATTAAGCTTAC
TGGAAAGTTTTTGATTGGGCACTATCTGATTAATAATCAAGACTGCAGAT
CAGATTTTGTGGTGATGTTCCTTAAGAATCAGAAGGAGAGGAATTTCAGC
CTGAAGGTGAAAGTGAAGAAGAAGTATCCGACGAAGAAGACAATGTGAAA
GGTATAATACGGTCTAATTGTGTAAAAAATGTGCACGAAGGCGTACAAGC
ATGACGAATTACATTGAACGTGTGGAAGGAGAGTCGGATTCAGAGAGACC
GAAGAAGCGAGAAAATCCAAAACGCAACAAAGAAAAAGAATCTTGTAAAA
TCTAAAAACCCTAATGTCTCGACTGACGCATCGAGAAAAGCCAAAGTCTC
AACAGACGTATCGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGAAAAG
CCAAAGTCTCAACTGACGTATCGAGAAAAGCCAAAGTCTCAACTGAGGAA
TCAAAATCTGAAGGTCTTGAAGAGTTTTGAAAACGATCTTTTCGGAGATG
CGTATTATGCGGTCAGTTACCAACGAAATACCGTCTTAAGAAAACCCGTC
CAGCTCCCAAAAGAAGAAGATGTACAGCTACTTTTGCAAGAGTGTGACTC
AACAATGGCCAAAGTGGACCCATTATCACTGAAGATATCTGATGCATCTT
ATTGTAATCTTAGAGCTGCCGTTGTTACATGCTTAATTGTATTTAACGCA
AGAAGGGGTGGCGAACCAGGCAGACTTTCAATAAGCCAGTGGGAAGAAGC
GCTGAAAGGCGAGTGGGTTGACCACGATGACGTCCCAGATTTCGATAATG
ATACTATGCTGATTACCTACCAGACAGGAAAAGGAAACCATCATTTGGTA
CCAGTGATATTCCCTTTTGAAACGCATCGATCTATCAAGCATTTAGCTGA
TCCTGAAGTCAGAGCTGCTGCTGGTGTTGCTAAAAACAATTCATTTCTAT
TTCCTGCAACCATGAATGGCGAAGGTCATGCAAGTGGTTGGCATTCTATT
AACGAGATTCTTGAAAAGCTTTCACTCAAGGGTGCTTTTAATCCAACAAA
GAACAGGCACCGTGTCGCCTCACTTTTGGCAAGATTAGAACTTTCAGACA
AAGAAAAAGAGTTGGTATATAAACACTTCGGACACTCTGAGATGGTCAAC
GAAGGCATTTATCAAGCGGCTGGGGGTACTCAACAACTCCAATCCACTGG
AGGTCTCCTGAAGCAGATTTATGAGTCCACAAAGCAAACAACCATCGAAA
TAAGGCAGCTTGCTTGTAATGCATCTGATATGTATCGAAGAGAGGGGATT
CCCATCCTGGCCAAAGCAGTTGAGATAATGACACAAAAAGAAGTAGAAGA
AGGTTCAACAGCTGTAGTCGATCAAAAGTCAGGGCTCAAACTTTCCATAT
TGAATATGATTAAGCTTACTGGAAAGTTTTTGATTGGGCACTATCTGATT
AATAATCAAGACTGCAGATCAGATTTTGTGGTGATGTTCCTTAAGAATCA
GAAGGAGAGGAATTTCAGCCTGAAGGTGAAAGTGAAGAAGAAGTATCCGA
CGAAGAAGACAATGTGAAAGGTATAATACGGTCTAATTGTGTAAAAAATG
TGCACGAAGGCGTACAAGCATGACGAATTACATTGAACGTGTGGAAGGAG
AGTCGGATTCAGAGAGACCGAAGAAGCGAGAAAATCCAAAACGCAACAAA
GAAAAAGAATCTTGTAAAATCTAAAAACCCTAATGTCTCGACTGACGCAT
CGAGAAAAGCCAAAGTCTCAACAGACGTATCGAGAAAAGCCAAAGTCTCA
ACAGACGTATCGAGAAAAGCCAAAGTCTCAACTGACGTATCGAGAAAAGC
CAAAGTCTCAACTGAGGAATCAAAATCTGAAGGTCTTGAAGAGTTTTGAA
AACGATCTTTTCGGAGATGCGTATTATGCGGTCAGTTACCAACGAAATAC
CGTCTTAAGAAAACCCGTCCAGCTCCCAAAAGAAGAAGATGTACAGCTAC
TTTTGCAAGAGTGTGACTCAACAATGGCCAAAGTGGACCCATTATCACTG
AAGATATCTGATGCATCTTATTGTAATCTTAGAGCTGCCGTTGTTACATG
CTTAATTGTATTTAACGCAAGAAGGGGTGGCGAACCAGGCAGACTTTCAA
TAAGCCAGTGGGAAGAAGCGCTGAAAGGCGAGTGGGTTGACCACGATGAC
GTCCCAGATTTCGATAATGATACTATGCTGATTACCTACCAGACAGGAAA
AGGAAACCATCATTTGGTACCAGTGATATTCCCTTTTGAAACGCATCGAT
CTATCAAGCATTTAGCTGATCCTGAAGTCAGAGCTGCTGCTGGTGTTGCT
AAAAACAATTCATTTCTATTTCCTGCAACCATGAATGGCGAAGGTCATGC
AAGTGGTTGGCATTCTATTAACGAGATTCTTGAAAAGCTTTCACTCAAGG
GTGCTTTTAATCCAACAAAGAACAGGCACCGTGTCGCCTCACTTTTGGCA
AGATTAGAACTTTCAGACAAAGAAAAAGAGTTGGTATATAAACACTTCGG
ACACTCTGAGATGGTCAACGAAGGCATTTATCAAGCGGCTGGGGGTACTC
AACAACTCCAATCCACTGGAGGTCTCCTGAAGCAGATTTATGAGTCCACA
AAGCAAACAACCATCGAAATAAGGCAGCTTGCTTGTAATGCATCTGATAT
GTATCGAAGAGAGGGGATTCCCATCCTGGCCAAAGCAGTTGAGATAATGA
CACAAAAAGAAGTAGAAGAAGGTTCAACAGCTGTAGTCGATCAAAAGTCA
GGGCTCAAACTTTCCATATTGAATATGATTAAGCTTACTGGAAAGTTTTT
GATTGGGCACTATCTGATTAATAATCAAGACTGCAGATCAGATTTTGTGG
TGATGTTCCTTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023930XLOC_023930Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039614-proteinTCONS_00039614-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039614-exon-sc0002149-1575043694:28676..28936TCONS_00039614-exon-sc0002149-1575043694:28676..28936Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1575043694:27551..28321TCONS_00039614-exon-sc0002149-1575043694:27551..28321Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1575043694:26870..27044TCONS_00039614-exon-sc0002149-1575043694:26870..27044Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1575043694:26636..26680TCONS_00039614-exon-sc0002149-1575043694:26636..26680Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1575043694:26416..26454TCONS_00039614-exon-sc0002149-1575043694:26416..26454Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1575043694:26018..26154TCONS_00039614-exon-sc0002149-1575043694:26018..26154Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1510915933:28676..28936TCONS_00039614-exon-sc0002149-1510915933:28676..28936Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1510915933:27551..28321TCONS_00039614-exon-sc0002149-1510915933:27551..28321Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1510915933:26870..27044TCONS_00039614-exon-sc0002149-1510915933:26870..27044Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1510915933:26636..26680TCONS_00039614-exon-sc0002149-1510915933:26636..26680Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1510915933:26416..26454TCONS_00039614-exon-sc0002149-1510915933:26416..26454Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1510915933:26018..26154TCONS_00039614-exon-sc0002149-1510915933:26018..26154Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1491911889:28676..28936TCONS_00039614-exon-sc0002149-1491911889:28676..28936Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1491911889:27551..28321TCONS_00039614-exon-sc0002149-1491911889:27551..28321Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1491911889:26870..27044TCONS_00039614-exon-sc0002149-1491911889:26870..27044Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1491911889:26636..26680TCONS_00039614-exon-sc0002149-1491911889:26636..26680Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1491911889:26416..26454TCONS_00039614-exon-sc0002149-1491911889:26416..26454Clytia hemisphaericaexon
TCONS_00039614-exon-sc0002149-1491911889:26018..26154TCONS_00039614-exon-sc0002149-1491911889:26018..26154Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002149supercontigsc0002149:26018..28936 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14552	0.141905	0	0	0.510228	0.465218	0.449013	0.560481	0	0.273408	0	0.290746	0.543408	0.603046	0	0.168706	0.0655447	0	0	0	0.0562787	0.123529	0.10011	0.0303382	0.312476	0.50198	0.0399073	0	0.0646063	0.0987354
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013762Integrase-like_cat
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006310DNA recombination
GO:0015074DNA integration
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
biological_process GO:0006310 DNA recombination
molecular_function GO:0003677 DNA binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039614 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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