TCONS_00039528 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039528
Unique NameTCONS_00039528
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length105

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039528 ID=TCONS_00039528|Name=TCONS_00039528|organism=Clytia hemisphaerica|type=transcript|length=105bp
TTGCGTTCGAGACGTTATGTACGATGTTGGGTCGTCTCTTCGAACCGTAC
GTTGTGCACCTTCTACCACATCTCTTGGTGTGTTTCGGTGATGGTAACCA
GTACG
Run BLAST on NCBI

transcript from alignment at sc0002135:5768..5872

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039528 ID=TCONS_00039528|Name=TCONS_00039528|organism=Clytia hemisphaerica|type=transcript|length=105bp|location=Sequence derived from alignment at sc0002135:5768..5872 (Clytia hemisphaerica)
CGTACTGGTTACCATCACCGAAACACACCAAGAGATGTGGTAGAAGGTGC
ACAACGTACGGTTCGAAGAGACGACCCAACATCGTACATAACGTCTCGAA
CGCAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023876XLOC_023876Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039528-exon-sc0002135-1491911889:5768..5872TCONS_00039528-exon-sc0002135-1491911889:5768..5872Clytia hemisphaericaexon
TCONS_00039528-exon-sc0002135-1510915933:5768..5872TCONS_00039528-exon-sc0002135-1510915933:5768..5872Clytia hemisphaericaexon
TCONS_00039528-exon-sc0002135-1575043694:5768..5872TCONS_00039528-exon-sc0002135-1575043694:5768..5872Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002135supercontigsc0002135:5768..5872 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039528 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top