TCONS_00039477 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039477
Unique NameTCONS_00039477
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2567

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039477 ID=TCONS_00039477|Name=TCONS_00039477|organism=Clytia hemisphaerica|type=transcript|length=2567bp
TGGATTTActtgagaatttattttggtattTCCTGTGGAGCCATCCATAC
ACAGTGCTTTGGAGCTTATGTTTCAGTAAgtttttcctatatttttgact
tgtaatttttcctattttgtacatttttttggtaCTAGATTCTCTATGAT
TCTTTAGATTTTTCCTTGCATTTTGGTCACCTTTTGACCTGGTCTGTGAC
TTTCGTTTAGTCGATTTTGGAGTCATTTTCCTAGCTATTTTTCTGGTCAC
AGACCGTTAGTCTTTTGGGCATTACATTTCGTCCTTTGGTCGTATTGGCT
TCATGCTCTATTTCTGGCCTCCATTTGCCCTCTGTTTGCTCTAGGACCAT
TTTACTTTTGGAGTTCCGTATAGTTTTCCGTATTCCGGTATTGGCCCTTT
CCATCCGGAACTGACTGATTCCGCAATTCGGAACTtagctatttttattt
tattttaaattctaattaggctttctttgtatttttctagCCTCTGAATC
AATAAAGAGCGTTGTAACACACCACACTGTTTCGGGCTTCCACATTACGG
TTCGACTTTATGGATCGTATTTGCCTGATGATCACAATTTATACAAAAGA
CATAAGAGATCTCTCAGAAAAGTCAGTTTGTATGATTTTTGTACAAGCAT
ACGATGAGGTACGGAATTCCAAAGTGTTAATTTTACCAAGCAGAAGAACA
CTTCGGGACTACAAAAATGCTATTCGGCCTGAAGTAGGTTTTGATCACGG
GGTTGTTGAAGATTTAGCTGAGTTGACTAAGAATCTCAAAGGTCATCAAA
GAAATATAACCTTGTCTTTTGATGAAGTTAAAATTCAGGAAGACCTTGTA
TTTGATAAACATACAGGTGAATTAATTGGTTTTGTTGACCTTGGAGATTC
TGACCTAAactcttctacattcaaggaagtAGATACCATAGCAACACATT
GTCTTGTGTTTTATGTGCGTGGCATTTCCACTGATCTTAAATTCAGCTTT
GCATATTTTGCCACAGTAGGTGCAACAGGAGCCCAGTTGATGCTACTTTT
TTGGAAAGCTGTCTCCATATTAGAGCTGACTTGTAAACTAAAAGTTGTTG
TAACCGTATCTGATGGAGCTTCCTTCAATAGAGCTTTCTTTAAATGTCAC
AAAGAATTGTCTCAATCCAATTCAAGTGTTATCTACAGGAcgattaatat
tttttctccTGAACGCAGGTTTATTTATTTCATATCTGATTCCCCTCATC
TTATGAAGACCATGCGCAATGCGATGTACCATTCTCAGAGGGGTGGGGTA
AGAACTAGAGATTTGTGGAATTGCAATCCCATATTGTGGAATCAGATTGT
TCACATTGTTCAAGATGACATAAACCGCAATCTGAAGCTGCTTCCCAAGC
TTACTCTGGCTCACATCAGTTTGACATCCTATTCTGCAATGACTGTTAGT
CTGGCAACTCAAGTTCTAAGCTCAAAAAAGGCAAATGTTATCTATCACTA
TTACCCTGAGTATAAGACCACAGGGGACTTGTGTCAATATATGGATTGCT
TTTTTGACTGTTTCAATATTAGGTGTCAAGAAGAGGgaaaattgaaaagg
aaaatatttttggagcCATTCCGTGATGAAAATGATTGGAGGTTTGATTG
GctgcaaaatgtttttcttgtcTATTTTAATAACTGGAAAGCCAAAGTTG
AGGCCAGAACTGATAAAACCGACAAAGAAAAGGAGAGGATGTTCATACCA
TATCAGACCTTTGAAGTTTAGATACAATGCCAATGCGCTTCGTGTGCAAC
GACACATTGTACCCACCAGGACAGGAAACACCAGAGGGGTCCATAAAGTg
tacaagaaaacaaaaagaatgccTTCATGGACTAAGGTTGACAATTCCTC
AATCAAGAAAAGACGcttgtcaaaaaaattgaatgaggaATAGAAGATGA
ATTGATGTTAATGCTTGTGTTTGaaattatttgtttattttgtatgttAC
TATTTTAGAACAGGGTTTGGGTCTTTGTGTTACACTCAGATGCACCAAAA
GTGTAGTTTAGTGGGAGCCATCCCTAAAATTACTTTTTTgtgctgttttt
gtatttttgctgTTTATTTGATGATAGTTGGAAATGAGTTTTTATAATTG
GTTATAcgttttttacattttgttttcAACATGTTTTCAGTTTGAAGATC
ACAATGTGTAGTTCGGTGGGAGTCATCCCTAAAATTACTATTTTgtgctg
tttttgtatttttgctgTCCAACTGATGATAGTTGGAAATGAGTTTTTAT
AATTGGTTATAcgtttttacattttgttttgaacatgTTTTCAGTTTGAA
AATCACAATGTGTAGTTCGGTGGGAGTCATCCCTAGAAGTANTGCCAATG
CGCTTCGTGTGCAACGACACATTGTACCCACCAGGACAGGAAACACCAGA
GGGGTCCATAAAGTgtacaagaaaacaaaaagaatgccTTCATAGACTAA
GGTTGACAATTCCTCAATCAAGAAAAGACGcttgtcaaaaaaattgaatg
aggaATAGAAGATGAAN
Run BLAST on NCBI

protein sequence of TCONS_00039477-protein

>TCONS_00039477-protein ID=TCONS_00039477-protein|Name=TCONS_00039477-protein|organism=Clytia hemisphaerica|type=polypeptide|length=403bp
MDRICLMITIYTKDIRDLSEKSVCMIFVQAYDEVRNSKVLILPSRRTLRD
YKNAIRPEVGFDHGVVEDLAELTKNLKGHQRNITLSFDEVKIQEDLVFDK
HTGELIGFVDLGDSDLNSSTFKEVDTIATHCLVFYVRGISTDLKFSFAYF
ATVGATGAQLMLLFWKAVSILELTCKLKVVVTVSDGASFNRAFFKCHKEL
SQSNSSVIYRTINIFSPERRFIYFISDSPHLMKTMRNAMYHSQRGGVRTR
DLWNCNPILWNQIVHIVQDDINRNLKLLPKLTLAHISLTSYSAMTVSLAT
QVLSSKKANVIYHYYPEYKTTGDLCQYMDCFFDCFNIRCQEEGKLKRKIF
LEPFRDENDWRFDWLQNVFLVYFNNWKAKVEARTDKTDKEKERMFIPYQT
FEV
Run BLAST on NCBI

transcript from alignment at sc0002119:24818..28240-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039477 ID=TCONS_00039477|Name=TCONS_00039477|organism=Clytia hemisphaerica|type=transcript|length=3423bp|location=Sequence derived from alignment at sc0002119:24818..28240- (Clytia hemisphaerica)
TGGATTTACTTGAGAATTTATTTTGGTATTTCCTGTGGAGCCATCCATAC ACAGTGCTTTGGAGCTTATGTTTCAGTAAGTTTTTCCTATATTTTTGACT TGTAATTTTTCCTATTTTGTACATTTTTTTGGTACTAGATTCTCTATGAT TCTTTAGATTTTTCCTTGCATTTTGGTCACCTTTTGACCTGGTCTGTGAC TTTCGTTTAGTCGATTTTGGAGTCATTTTCCTAGCTATTTTTCTGGTCAC AGACCGTTAGTCTTTTGGGCATTACATTTCGTCCTTTGGTCGTATTGGCT TCATGCTCTATTTCTGGCCTCCATTTGCCCTCTGTTTGCTCTAGGACCAT TTTACTTTTGGAGTTCCGTATAGTTTTCCGTATTCCGGTATTGGCCCTTT CCATCCGGAACTGACTGATTCCGCAATTCGGAACTTAGCTATTTTTATTT TATTTTAAATTCTAATTAGGCTTTCTTTGTATTTTTCTAGCCTCTGAATC AATAAAGAGCGTTGTAACACACCACACTGTTTCGGGCTTCCACATTACGG TTCGACTTTATGGATCGTATTTGCCTGATGATCACAATTTATACAAAAGA CATAAGAGATCTCTCAGAAAAGTCAGTTTGTATGATTTTTGTACAAGTAT CTTAAAATTCAGTGTTTGTAATGGAATTTCTTCCTCTTTTATTGCACCAA AATCTTTTATTCATGCCATTCCTCTAAAATATGACGAAGAAAATCAGGCT CCTACTAAAATCCTTTACAGATCTTTGGCATGCGGGGCTTTGATTGAAAG TGAAGAGATTTGCTCAGCTTGTGCTAGGGTTAGGGTTAGGGTTAGGGTGT TAAGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGTTAAGGT TAGGGTTAGGGTNTTTACAGATCTTTGGCATGTGGGGCTTTGATTGAAAG TGAAGAGATTTGCTCAGCTTGTAAGTGTTGTGTCAAAAAAAATGTTTTGA AACCTAAAAAAGAAATCACTCCTGCGTCTAAATTTGCACCGCTATCAAGA ACTAACCGTGCCAAAGTGATCTTAACCCTAGTAAAGGAAAGAGCCAGAGT CAAAGAACTATCAGGGAAGGTTGAAAAATTACAAAACGAAATGGAAACGA AAGGGATTTCTGTATCATCAGGGATGGCAAAGGACATCAATAGAATCATG AAAAATAATGAAGAAAATTCATCACCCTTCATGAAGCTATTTTGAAAAGA ACAGAAGTAAATGTCAGCCCGAGGAAACTTTGTTCACCATCCCATGTTAA TTCGTTTTTGTTTGTCTTTAGCCTCAAAATCAGCCAAGGCATACGATGAG GTACGGAATTCCAAAGTGTTAATTTTACCAAGCAGAAGAACACTTCGGGA CTACAAAAATGCTATTCGGCCTGAAGTAGGTTTTGATCACGGGGTTGTTG AAGATTTAGCTGAGTTGACTAAGAATCTCAAAGGTCATCAAAGAAATATA ACCTTGTCTTTTGATGAAGTTAAAATTCAGGAAGACCTTGTATTTGATAA ACATACAGGTGAATTAATTGGTTTTGTTGACCTTGGAGATTCTGACCTAA ACTCTTCTACATTCAAGGAAGTAGATACCATAGCAACACATTGTCTTGTG TTTTATGTGCGTGGCATTTCCACTGATCTTAAATTCAGCTTTGCATATTT TGCCACAGTAGGTGCAACAGGAGCCCAGTTGATGCTACTTTTTTGGAAAG CTGTCTCCATATTAGAGCTGACTTGTAAACTAAAAGTTGTTGTAACCGTA TCTGATGGAGCTTCCTTCAATAGAGCTTTCTTTAAATGTCACAAAGAATT GTCTCAATCCAATTCAAGTGTTATCTACAGGACGATTAATATTTTTTCTC CTGAACGCAGGTTTATTTATTTCATATCTGATTCCCCTCATCTTATGAAG ACCATGCGCAATGCGATGTACCATTCTCAGAGGGGTGGGGTAAGAACTAG AGATTTGTGGAATTGCAATCCCATATTGTGGAATCAGATTGTTCACATTG TTCAAGATGACATAAACCGCAATCTGAAGCTGCTTCCCAAGCTTACTCTG GCTCACATCAGTTTGACATCCTATTCTGCAATGACTGTTAGTCTGGCAAC TCAAGTTCTAAGCTCAAAAAAGGCAAATGTTATCTATCACTATTACCCTG AGTATAAGACCACAGGGGACTTGTGTCAATATATGGATTGCTTTTTTGAC TGTTTCAATATTAGGTGTCAAGAAGAGGGAAAATTGAAAAGGAAAATATT TTTGGAGCCATTCCGTGATGAAAATGATTGGAGGTTTGATTGGCTGCAAA ATGTTTTTCTTGTCTATTTTAATAACTGGAAAGCCAAAGTTGAGGCCAGA ACTGATAAAACCGACAAAGAAAAGGAGAGGATGTTCATACCATATCAGAC CTTTGAAGGTTTGTGTATAAATGTGAAATCCCTCGTAGAATCAGTGAAAT ATCTTTTGAAAAGTGGTGCAGAATTTGTTCTGACTGAAAGGTTTTGTCAA GATGTTTTAGAGGAGTATTTCGGCAGACAGAGAAGCATTGGAGGGTTTAA CACCACACCAAACCTTTATCAGTTTAGATACAATGCCAATGCGCTTCGTG TGCAACGACACATTGTACCCACCAGGACAGGAAACACCAGAGGGGTCCAT AAAGTGTACAAGAAAACAAAAAGAATGCCTTCATGGACTAAGGTTGACAA TTCCTCAATCAAGAAAAGACGCTTGTCAAAAAAATTGAATGAGGAATAGA AGATGAATTGATGTTAATGCTTGTGTTTGAAATTATTTGTTTATTTTGTA TGTTACTATTTTAGAACAGGGTTTGGGTCTTTGTGTTACACTCAGATGCA CCAAAAGTGTAGTTTAGTGGGAGCCATCCCTAAAATTACTTTTTTGTGCT GTTTTTGTATTTTTGCTGTTTATTTGATGATAGTTGGAAATGAGTTTTTA TAATTGGTTATACGTTTTTTACATTTTGTTTTCAACATGTTTTCAGTTTG AAGATCACAATGTGTAGTTCGGTGGGAGTCATCCCTAAAATTACTATTTT GTGCTGTTTTTGTATTTTTGCTGTCCAACTGATGATAGTTGGAAATGAGT TTTTATAATTGGTTATACGTTTTTACATTTTGTTTTGAACATGTTTTCAG TTTGAAAATCACAATGTGTAGTTCGGTGGGAGTCATCCCTAGAAGTANTG CCAATGCGCTTCGTGTGCAACGACACATTGTACCCACCAGGACAGGAAAC ACCAGAGGGGTCCATAAAGTGTACAAGAAAACAAAAAGAATGCCTTCATA GACTAAGGTTGACAATTCCTCAATCAAGAAAAGACGCTTGTCAAAAAAAT TGAATGAGGAATAGAAGATGAAN

Coding sequence (CDS) from alignment at sc0002119:24818..28240-

>TCONS_00039477 ID=TCONS_00039477|Name=TCONS_00039477|organism=Clytia hemisphaerica|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0002119:24818..28240- (Clytia hemisphaerica)
TTTAGGCATACGATGAGGTACGGAATTCCAAAGTGTTAATTTTACCAAGC
AGAAGAACACTTCGGGACTACAAAAATGCTATTCGGCCTGAAGTAGGTTT
TGATCACGGGGTTGTTGAAGATTTAGCTGAGTTGACTAAGAATCTCAAAG
GTCATCAAAGAAATATAACCTTGTCTTTTGATGAAGTTAAAATTCAGGAA
GACCTTGTATTTGATAAACATACAGGTGAATTAATTGGTTTTGTTGACCT
TGGAGATTCTGACCTAAACTCTTCTACATTCAAGGAAGTAGATACCATAG
CAACACATTGTCTTGTGTTTTATGTGCGTGGCATTTCCACTGATCTTAAA
TTCAGCTTTGCATATTTTGCCACAGTAGGTGCAACAGGAGCCCAGTTGAT
GCTACTTTTTTGGAAAGCTGTCTCCATATTAGAGCTGACTTGTAAACTAA
AAGTTGTTGTAACCGTATCTGATGGAGCTTCCTTCAATAGAGCTTTCTTT
AAATGTCACAAAGAATTGTCTCAATCCAATTCAAGTGTTATCTACAGGAC
GATTAATATTTTTTCTCCTGAACGCAGGTTTATTTATTTCATATCTGATT
CCCCTCATCTTATGAAGACCATGCGCAATGCGATGTACCATTCTCAGAGG
GGTGGGGTAAGAACTAGAGATTTGTGGAATTGCAATCCCATATTGTGGAA
TCAGATTGTTCACATTGTTCAAGATGACATAAACCGCAATCTGAAGCTGC
TTCCCAAGCTTACTCTGGCTCACATCAGTTTGACATCCTATTCTGCAATG
ACTGTTAGTCTGGCAACTCAAGTTCTAAGCTCAAAAAAGGCAAATGTTAT
CTATCACTATTACCCTGAGTATAAGACCACAGGGGACTTGTGTCAATATA
TGGATTGCTTTTTTGACTGTTTCAATATTAGGTGTCAAGAAGAGGGAAAA
TTGAAAAGGAAAATATTTTTGGAGCCATTCCGTGATGAAAATGATTGGAG
GTTTGATTGGCTGCAAAATGTTTTTCTTGTCTATTTTAATAACTGGAAAG
CCAAAGTTGAGGCCAGAACTGATAAAACCGACAAAGAAAAGGAGAGGATG
TTCATACCATATCAGACCTTTGAAGATGGATCGTATTTGCCTGATGATCA
CAATTTATACAAAAGACATAAGAGATCTCTCAGAAAAGTCAGTTTGTATG
ATTTTTGTACAATTTAGGCATACGATGAGGTACGGAATTCCAAAGTGTTA
ATTTTACCAAGCAGAAGAACACTTCGGGACTACAAAAATGCTATTCGGCC
TGAAGTAGGTTTTGATCACGGGGTTGTTGAAGATTTAGCTGAGTTGACTA
AGAATCTCAAAGGTCATCAAAGAAATATAACCTTGTCTTTTGATGAAGTT
AAAATTCAGGAAGACCTTGTATTTGATAAACATACAGGTGAATTAATTGG
TTTTGTTGACCTTGGAGATTCTGACCTAAACTCTTCTACATTCAAGGAAG
TAGATACCATAGCAACACATTGTCTTGTGTTTTATGTGCGTGGCATTTCC
ACTGATCTTAAATTCAGCTTTGCATATTTTGCCACAGTAGGTGCAACAGG
AGCCCAGTTGATGCTACTTTTTTGGAAAGCTGTCTCCATATTAGAGCTGA
CTTGTAAACTAAAAGTTGTTGTAACCGTATCTGATGGAGCTTCCTTCAAT
AGAGCTTTCTTTAAATGTCACAAAGAATTGTCTCAATCCAATTCAAGTGT
TATCTACAGGACGATTAATATTTTTTCTCCTGAACGCAGGTTTATTTATT
TCATATCTGATTCCCCTCATCTTATGAAGACCATGCGCAATGCGATGTAC
CATTCTCAGAGGGGTGGGGTAAGAACTAGAGATTTGTGGAATTGCAATCC
CATATTGTGGAATCAGATTGTTCACATTGTTCAAGATGACATAAACCGCA
ATCTGAAGCTGCTTCCCAAGCTTACTCTGGCTCACATCAGTTTGACATCC
TATTCTGCAATGACTGTTAGTCTGGCAACTCAAGTTCTAAGCTCAAAAAA
GGCAAATGTTATCTATCACTATTACCCTGAGTATAAGACCACAGGGGACT
TGTGTCAATATATGGATTGCTTTTTTGACTGTTTCAATATTAGGTGTCAA
GAAGAGGGAAAATTGAAAAGGAAAATATTTTTGGAGCCATTCCGTGATGA
AAATGATTGGAGGTTTGATTGGCTGCAAAATGTTTTTCTTGTCTATTTTA
ATAACTGGAAAGCCAAAGTTGAGGCCAGAACTGATAAAACCGACAAAGAA
AAGGAGAGGATGTTCATACCATATCAGACCTTTGAAGATGGATCGTATTT
GCCTGATGATCACAATTTATACAAAAGACATAAGAGATCTCTCAGAAAAG
TCAGTTTGTATGATTTTTGTACAATTTAGGCATACGATGAGGTACGGAAT
TCCAAAGTGTTAATTTTACCAAGCAGAAGAACACTTCGGGACTACAAAAA
TGCTATTCGGCCTGAAGTAGGTTTTGATCACGGGGTTGTTGAAGATTTAG
CTGAGTTGACTAAGAATCTCAAAGGTCATCAAAGAAATATAACCTTGTCT
TTTGATGAAGTTAAAATTCAGGAAGACCTTGTATTTGATAAACATACAGG
TGAATTAATTGGTTTTGTTGACCTTGGAGATTCTGACCTAAACTCTTCTA
CATTCAAGGAAGTAGATACCATAGCAACACATTGTCTTGTGTTTTATGTG
CGTGGCATTTCCACTGATCTTAAATTCAGCTTTGCATATTTTGCCACAGT
AGGTGCAACAGGAGCCCAGTTGATGCTACTTTTTTGGAAAGCTGTCTCCA
TATTAGAGCTGACTTGTAAACTAAAAGTTGTTGTAACCGTATCTGATGGA
GCTTCCTTCAATAGAGCTTTCTTTAAATGTCACAAAGAATTGTCTCAATC
CAATTCAAGTGTTATCTACAGGACGATTAATATTTTTTCTCCTGAACGCA
GGTTTATTTATTTCATATCTGATTCCCCTCATCTTATGAAGACCATGCGC
AATGCGATGTACCATTCTCAGAGGGGTGGGGTAAGAACTAGAGATTTGTG
GAATTGCAATCCCATATTGTGGAATCAGATTGTTCACATTGTTCAAGATG
ACATAAACCGCAATCTGAAGCTGCTTCCCAAGCTTACTCTGGCTCACATC
AGTTTGACATCCTATTCTGCAATGACTGTTAGTCTGGCAACTCAAGTTCT
AAGCTCAAAAAAGGCAAATGTTATCTATCACTATTACCCTGAGTATAAGA
CCACAGGGGACTTGTGTCAATATATGGATTGCTTTTTTGACTGTTTCAAT
ATTAGGTGTCAAGAAGAGGGAAAATTGAAAAGGAAAATATTTTTGGAGCC
ATTCCGTGATGAAAATGATTGGAGGTTTGATTGGCTGCAAAATGTTTTTC
TTGTCTATTTTAATAACTGGAAAGCCAAAGTTGAGGCCAGAACTGATAAA
ACCGACAAAGAAAAGGAGAGGATGTTCATACCATATCAGACCTTTGAAGA
TGGATCGTATTTGCCTGATGATCACAATTTATACAAAAGACATAAGAGAT
CTCTCAGAAAAGTCAGTTTGTATGATTTTTGTACAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023829XLOC_023829Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039477-proteinTCONS_00039477-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039477-exon-sc0002119-1575043694:27595..28240TCONS_00039477-exon-sc0002119-1575043694:27595..28240Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1575043694:25783..26902TCONS_00039477-exon-sc0002119-1575043694:25783..26902Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1575043694:24818..25618TCONS_00039477-exon-sc0002119-1575043694:24818..25618Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1510915933:27595..28240TCONS_00039477-exon-sc0002119-1510915933:27595..28240Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1510915933:25783..26902TCONS_00039477-exon-sc0002119-1510915933:25783..26902Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1510915933:24818..25618TCONS_00039477-exon-sc0002119-1510915933:24818..25618Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1491911889:27595..28240TCONS_00039477-exon-sc0002119-1491911889:27595..28240Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1491911889:25783..26902TCONS_00039477-exon-sc0002119-1491911889:25783..26902Clytia hemisphaericaexon
TCONS_00039477-exon-sc0002119-1491911889:24818..25618TCONS_00039477-exon-sc0002119-1491911889:24818..25618Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002119supercontigsc0002119:24818..28240 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.417553 0.476901 0.508372 0.251366 1.03769 0.64769 1.05979 1.11835 1.16514 1.33189 1.46131 1.0548 1.11212 1.28297 0.425907 0.369745 0.354518 0.344626 0 0.551935 0.591867 0.390782 0.488475 0.420105 1.7433 2.15504 0.29626 0.621625 0.28914 0.328291
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR021896Transposase_37
Vocabulary: Molecular Function
TermDefinition
GO:0004803transposase activity
Vocabulary: Biological Process
TermDefinition
GO:0006313transposition, DNA-mediated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006313 transposition, DNA-mediated
molecular_function GO:0004803 transposase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039477 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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