XLOC_023829 (gene) - C. hemisphaerica

Overview
NameXLOC_023829
Unique NameXLOC_023829
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0002119:24818..28240-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023829 ID=XLOC_023829|Name=XLOC_023829|organism=Clytia hemisphaerica|type=gene|length=3423bp|location=Sequence derived from alignment at sc0002119:24818..28240- (Clytia hemisphaerica)
TGGATTTACTTGAGAATTTATTTTGGTATTTCCTGTGGAGCCATCCATAC
ACAGTGCTTTGGAGCTTATGTTTCAGTAAGTTTTTCCTATATTTTTGACT
TGTAATTTTTCCTATTTTGTACATTTTTTTGGTACTAGATTCTCTATGAT
TCTTTAGATTTTTCCTTGCATTTTGGTCACCTTTTGACCTGGTCTGTGAC
TTTCGTTTAGTCGATTTTGGAGTCATTTTCCTAGCTATTTTTCTGGTCAC
AGACCGTTAGTCTTTTGGGCATTACATTTCGTCCTTTGGTCGTATTGGCT
TCATGCTCTATTTCTGGCCTCCATTTGCCCTCTGTTTGCTCTAGGACCAT
TTTACTTTTGGAGTTCCGTATAGTTTTCCGTATTCCGGTATTGGCCCTTT
CCATCCGGAACTGACTGATTCCGCAATTCGGAACTTAGCTATTTTTATTT
TATTTTAAATTCTAATTAGGCTTTCTTTGTATTTTTCTAGCCTCTGAATC
AATAAAGAGCGTTGTAACACACCACACTGTTTCGGGCTTCCACATTACGG
TTCGACTTTATGGATCGTATTTGCCTGATGATCACAATTTATACAAAAGA
CATAAGAGATCTCTCAGAAAAGTCAGTTTGTATGATTTTTGTACAAGTAT
CTTAAAATTCAGTGTTTGTAATGGAATTTCTTCCTCTTTTATTGCACCAA
AATCTTTTATTCATGCCATTCCTCTAAAATATGACGAAGAAAATCAGGCT
CCTACTAAAATCCTTTACAGATCTTTGGCATGCGGGGCTTTGATTGAAAG
TGAAGAGATTTGCTCAGCTTGTGCTAGGGTTAGGGTTAGGGTTAGGGTGT
TAAGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTTAGGGTGTTAAGGT
TAGGGTTAGGGTNTTTACAGATCTTTGGCATGTGGGGCTTTGATTGAAAG
TGAAGAGATTTGCTCAGCTTGTAAGTGTTGTGTCAAAAAAAATGTTTTGA
AACCTAAAAAAGAAATCACTCCTGCGTCTAAATTTGCACCGCTATCAAGA
ACTAACCGTGCCAAAGTGATCTTAACCCTAGTAAAGGAAAGAGCCAGAGT
CAAAGAACTATCAGGGAAGGTTGAAAAATTACAAAACGAAATGGAAACGA
AAGGGATTTCTGTATCATCAGGGATGGCAAAGGACATCAATAGAATCATG
AAAAATAATGAAGAAAATTCATCACCCTTCATGAAGCTATTTTGAAAAGA
ACAGAAGTAAATGTCAGCCCGAGGAAACTTTGTTCACCATCCCATGTTAA
TTCGTTTTTGTTTGTCTTTAGCCTCAAAATCAGCCAAGGCATACGATGAG
GTACGGAATTCCAAAGTGTTAATTTTACCAAGCAGAAGAACACTTCGGGA
CTACAAAAATGCTATTCGGCCTGAAGTAGGTTTTGATCACGGGGTTGTTG
AAGATTTAGCTGAGTTGACTAAGAATCTCAAAGGTCATCAAAGAAATATA
ACCTTGTCTTTTGATGAAGTTAAAATTCAGGAAGACCTTGTATTTGATAA
ACATACAGGTGAATTAATTGGTTTTGTTGACCTTGGAGATTCTGACCTAA
ACTCTTCTACATTCAAGGAAGTAGATACCATAGCAACACATTGTCTTGTG
TTTTATGTGCGTGGCATTTCCACTGATCTTAAATTCAGCTTTGCATATTT
TGCCACAGTAGGTGCAACAGGAGCCCAGTTGATGCTACTTTTTTGGAAAG
CTGTCTCCATATTAGAGCTGACTTGTAAACTAAAAGTTGTTGTAACCGTA
TCTGATGGAGCTTCCTTCAATAGAGCTTTCTTTAAATGTCACAAAGAATT
GTCTCAATCCAATTCAAGTGTTATCTACAGGACGATTAATATTTTTTCTC
CTGAACGCAGGTTTATTTATTTCATATCTGATTCCCCTCATCTTATGAAG
ACCATGCGCAATGCGATGTACCATTCTCAGAGGGGTGGGGTAAGAACTAG
AGATTTGTGGAATTGCAATCCCATATTGTGGAATCAGATTGTTCACATTG
TTCAAGATGACATAAACCGCAATCTGAAGCTGCTTCCCAAGCTTACTCTG
GCTCACATCAGTTTGACATCCTATTCTGCAATGACTGTTAGTCTGGCAAC
TCAAGTTCTAAGCTCAAAAAAGGCAAATGTTATCTATCACTATTACCCTG
AGTATAAGACCACAGGGGACTTGTGTCAATATATGGATTGCTTTTTTGAC
TGTTTCAATATTAGGTGTCAAGAAGAGGGAAAATTGAAAAGGAAAATATT
TTTGGAGCCATTCCGTGATGAAAATGATTGGAGGTTTGATTGGCTGCAAA
ATGTTTTTCTTGTCTATTTTAATAACTGGAAAGCCAAAGTTGAGGCCAGA
ACTGATAAAACCGACAAAGAAAAGGAGAGGATGTTCATACCATATCAGAC
CTTTGAAGGTTTGTGTATAAATGTGAAATCCCTCGTAGAATCAGTGAAAT
ATCTTTTGAAAAGTGGTGCAGAATTTGTTCTGACTGAAAGGTTTTGTCAA
GATGTTTTAGAGGAGTATTTCGGCAGACAGAGAAGCATTGGAGGGTTTAA
CACCACACCAAACCTTTATCAGTTTAGATACAATGCCAATGCGCTTCGTG
TGCAACGACACATTGTACCCACCAGGACAGGAAACACCAGAGGGGTCCAT
AAAGTGTACAAGAAAACAAAAAGAATGCCTTCATGGACTAAGGTTGACAA
TTCCTCAATCAAGAAAAGACGCTTGTCAAAAAAATTGAATGAGGAATAGA
AGATGAATTGATGTTAATGCTTGTGTTTGAAATTATTTGTTTATTTTGTA
TGTTACTATTTTAGAACAGGGTTTGGGTCTTTGTGTTACACTCAGATGCA
CCAAAAGTGTAGTTTAGTGGGAGCCATCCCTAAAATTACTTTTTTGTGCT
GTTTTTGTATTTTTGCTGTTTATTTGATGATAGTTGGAAATGAGTTTTTA
TAATTGGTTATACGTTTTTTACATTTTGTTTTCAACATGTTTTCAGTTTG
AAGATCACAATGTGTAGTTCGGTGGGAGTCATCCCTAAAATTACTATTTT
GTGCTGTTTTTGTATTTTTGCTGTCCAACTGATGATAGTTGGAAATGAGT
TTTTATAATTGGTTATACGTTTTTACATTTTGTTTTGAACATGTTTTCAG
TTTGAAAATCACAATGTGTAGTTCGGTGGGAGTCATCCCTAGAAGTANTG
CCAATGCGCTTCGTGTGCAACGACACATTGTACCCACCAGGACAGGAAAC
ACCAGAGGGGTCCATAAAGTGTACAAGAAAACAAAAAGAATGCCTTCATA
GACTAAGGTTGACAATTCCTCAATCAAGAAAAGACGCTTGTCAAAAAAAT
TGAATGAGGAATAGAAGATGAAN
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00039477TCONS_00039477Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00039477-proteinTCONS_00039477-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002119supercontigsc0002119:24818..28240 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.42	0.48	0.51	0.25	1.04	0.65	1.06	1.12	1.17	1.33	1.46	1.05	1.11	1.28	0.43	0.37	0.35	0.34	0	0.55	0.59	0.39	0.49	0.42	1.74	2.16	0.3	0.62	0.29	0.33