TCONS_00039383 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039383
Unique NameTCONS_00039383
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1729

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039383 ID=TCONS_00039383|Name=TCONS_00039383|organism=Clytia hemisphaerica|type=transcript|length=1729bp
TTCAATCAAAAAGGATGTAATATTTTAGTGATAAATATTGGTCAGAATTG
ATAAGTATCAATTGGCTATCGATTATTTGGTTACTTTCTACTCctttttc
aactcttttttgTCTTTGGGCTAAAAGGCCGGTCTATatgctgttttttt
ttcaatatttttatgtatagctatgcaatttatgctAATCATTTGGCTTT
TGTTTCCCTGCCGCTTTTACCTCCTCATGTTTTAGTAGTAATATTGTCAT
ATACTTATTTTAGGGAAGAAAAAATGTATAATAATAGAAATAATAGCACT
GGAAGAATTGTCTCAAGAATTATAGGCAATTCTGCTAACGGCATAATTGC
TGAAAGAAATCGGCTGTTTCGAAGAAACAACAATAATGACACtccaaaat
caaagaaaataaagctcATTGCTAAAGATGTCTATTTGCTAAAAAAGGAC
ACCACAACTATGGCTCGAGGAACAGAAAAATGCAAACTCCATGAAAACGG
CCAAGTTATCACAGCCTTTCAAATAGAAGGTTATCTCTCAGAGGAACAAC
TATATGAAAGGCTGGAAGAGTGTTTTTCCTCAGTTTTAGATTTCTCACAT
CCGGTTCCCAGGTTCGAGTATGTCAAGTACATCAGTGGCCAGCTTGTATC
ACCAACATTGGGGCAAAATGTGTCTTTCGATAGCACAACAGTTCTTTCAA
TTAGCCGTCAGGGTGACATTTATCTCCGAGCAACACATAATcttaaaaac
atcgAAGTGATGGGTGATGATAGTGATGATAATTTGGAAAATGCTGAACA
AAACACGCCAATCAACAATCAACAATCAAGAATATTTCGGAATGGCAGCC
AAATACGACAGCCAGGTTCTTCTACAAGAACACTGCCAGAACAGCCAGGT
TCCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACT
GCCAGAACAGCCACGGTCCTCCTCCCATCCACAACAGCCTTCACAGGAAA
TCAATTCTTCTACAACTACAGGTGCTACAGCTGATAATCGGCAAAATCTA
AGGGACTTATTCCCGAACTTAACTGACTGGCAAATTTGTGAAATACTTGA
ATCTTATTCAGATATGGAAGAAGCAGCAAGTTTTGCTGCAGAGATTTCGG
AAAAAAACGAGAAAGGAGCAACAATGGAATCTTTAGAAGACGTTTTTTcg
tattttgaaaagaaattgcaTCCATCGAGGCAAACACTTAGAGttgaaga
aaaacatattttctcaGATGTTTTGGCATTCTATAAAGGTAGAGATTTTG
ATCCAACAAAGAAACTTCGTGTCATTATAGAAAACGGGCCTGGCATCGAC
GCTGGAGGTTTAACAAGACATATGTTCGACGTTGTATTTCAAATGTTACG
TAAATCCGATGGagagaacagatattttgaaggaGAGAGATTTTCTCTAC
TCCCTATTTGTTCCTCAAGAACCGCcctttcagaaattttcatatACATA
GGTAAAATCATTGGGCATGCCTTGTTGCATGGAATCAGAGTTATTCAAAT
CCCTACAGTGGCATATTTTTACATAGCTACCCAAGATATCACACAGTGTT
TGGAGTATTTAGATGCGGATGATGGTAGATATTGGGTTCATATTTCTTTA
CACACAATGTTATTAATATCTAGTTCCATATTTTTCAATGTTAAATCTGC
TGTTTTTGagggaaaattttgtttttgag
Run BLAST on NCBI

protein sequence of TCONS_00039383-protein

>TCONS_00039383-protein ID=TCONS_00039383-protein|Name=TCONS_00039383-protein|organism=Clytia hemisphaerica|type=polypeptide|length=521bp
MYSYAIYANHLAFVSLPLLPPHVLVVILSYTYFREEKMYNNRNNSTGRIV
SRIIGNSANGIIAERNRLFRRNNNNDTPKSKKIKLIAKDVYLLKKDTTTM
ARGTEKCKLHENGQVITAFQIEGYLSEEQLYERLEECFSSVLDFSHPVPR
FEYVKYISGQLVSPTLGQNVSFDSTTVLSISRQGDIYLRATHNLKNIEVM
GDDSDDNLENAEQNTPINNQQSRIFRNGSQIRQPGSSTRTLPEQPGSSTR
PLPEQPGSSTRPLPEQPRSSSHPQQPSQEINSSTTTGATADNRQNLRDLF
PNLTDWQICEILESYSDMEEAASFAAEISEKNEKGATMESLEDVFSYFEK
KLHPSRQTLRVEEKHIFSDVLAFYKGRDFDPTKKLRVIIENGPGIDAGGL
TRHMFDVVFQMLRKSDGENRYFEGERFSLLPICSSRTALSEIFIYIGKII
GHALLHGIRVIQIPTVAYFYIATQDITQCLEYLDADDGRYWVHISLHTML
LISSSIFFNVKSAVFEGKFCF
Run BLAST on NCBI

transcript from alignment at sc0002088:9831..13609-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039383 ID=TCONS_00039383|Name=TCONS_00039383|organism=Clytia hemisphaerica|type=transcript|length=3779bp|location=Sequence derived from alignment at sc0002088:9831..13609- (Clytia hemisphaerica)
TTCAATCAAAAAGGATGTAATATTTTAGTGATAAATATTGGTCAGAATTG
ATAAGTATCAATTGGCTATCGATTATTTGGTTACTTTCTACTCCTTTTTC
AACTCTTTTTTGTCTTTGGGCTAAAAGGCCGGTCTATATGCTGTTTTTTT
TTCAATATTTTTATGTATAGCTATGCAATTTATGCTAATCATTTGGCTTT
TGTTTCCCTGCCGCTTTTACCTCCTCATGTTTTAGTAGTAATATTGTCAT
ATACTTATTTTAGGGAAGAAAAAATGTATAATAATAGAAATAATAGCACT
GGAAGAATTGTCTCAAGAATTATAGGCAATTCTGCTAACGGCATAATTGC
TGAAAGAAATCGGCTGTTTCGAAGAAACAACAATAATGACACTCCAAAAT
CAAAGAAAATAAAGCTCATTGCTAAAGATGTCTATTTGCTAAAAAAGGAC
ACCACAACTATGGCTCGAGGAACAGAAAAATGCAAACTCCATGAAAACGG
CCAAGTTATCACAGCCTTTCAAATAGAAGGTTATCTCTCAGAGGAACAAC
TATATGAAAGGCTGGAAGAGTGTTTTTCCTCAGTTTTAGATTTCTCACAT
CCGGTTCCCAGGTATTATCTTCATCCATACATCATTTTATTATATATTTC
AACAAAATGTAAACAATCGAATTTTGATTTTTAGCACCTGTCTACCACAT
AATATAGGCCTGCAGCCAAGGTAGTGAAATGTGTTGTTTCGTAGGGCACC
CCCCTATCAGGGCAAATTTTTGACCATTTGCTCCTAATAGGGGCCTATTT
GTTTCCCTTGCTATAAATGCTGTAGATGATAGCTGCTAAAAGTGCTATGA
AATCCCATGAAAACTTTGAAAATGATAGCAAATGATTTTAGATGCAATTT
TTACTGTGAAGAAATTGCAAACTTTGCTTTGCTTGCAGAAGGTTGATGTT
TTTACTATTTTTGCTGATGGGGAGTTTGCAAGTTTATTTACAAAAAATGC
TAAAGTTTTGGACAGAAAACAATTATTTGAGTGCACTTGTAGTAAATATA
GCAAAAATAGTGATGAAACAAATAGGCCCTAGTATGTAAAATTGGAAAAT
AAAAATTTGCCTCGCAAACTTTTAAACTCGCAGTTTTCGAGTAAATCGGT
TTTTATTTACTTGAGATATTTGAATTTAAATATCATCGAATCGAGTTTTT
TTTGCGGAGTTTATAGCAGTTTTGATGTACGTTAAAAGTGGAACATCTCT
AAATCTAGACATCGAAACCCAGCAAACCATACCGTTTTTGGATACTACTA
AGTGAGAGCTATTCAACTGTGAGAATGAATTTTCTGGAAAATGATCTCAG
AAAGTTTCTGACATCATGGGAAAAAGCAAAAATCGTCAATTTTTGGCTAT
TTGTCGGCACCATGAAACCTAACAAATGAATAACGAAAAAATTTTTATAA
TAATGTTATATATAATAAAAATCGATTTACTCGAAAACTGCCGGAAATTT
GTAAGGTAAATTTTTATTTTCAATTCTACATACTATTAGGAGCAAAATAA
GGGGTGCCCTACAAAAACCTATTTTAAGGCTTTTTCGAATTTCAGACGCT
GGTCTAATAGTTGTTTAAAATCGAATTTGATATTTCAATTTAGTGCACTT
CTTTATTTCAGTGGAATTTGTACACAAAAGCAATATAATGAATTATAGAA
TAATAATATAACTCTGTTGCTTGCTTAAATAAACTTTGTTGTTGTTTTTG
CATTCAATTTCATACATTTCTTGTGAAATCCACAATTTAGGTTCGAGTAT
GTCAAGTACATCAGTGGCCAGCTTGTATCACCAACATTGGGGCAAAATGT
GTCTTTCGATAGCACAACAGTTCTTTCAATTAGCCGTCAGGGTGACATTT
ATCTCCGAGCAACACATAATCTTGTAAGTTTTTTTTAATAGTATAACGAA
AGTGGTTGTAAACCCTAACATTTTAACATTCCAATTGGAATGACATAGGA
AAACATGATATGTATGATTTCTGAGAAAGATTCAATTCAATTTTCAGACT
ACGGGCTACGGCTGTTAAAGATTTTTAAGATTCTAGCCTACAAGTTTTGT
ATTTTCAAGGAAAATAACACATGGTTTTTATACTAAGTTACCAAAAATTA
TGCCAAAGATACCTAAATTTAGCTTGTACAGTAAATGCCAACTTCAGGCT
TTTTATGCATCCATCCATCAGGTTGATTAAGTAGTGTTATGTATTTTTTT
GGCAATTTTCAGGGCTGAACCCTTTAGCAACTTGGTTGCTTATAAAAACT
GATTCACATTTTAAGTCAGACCATGACTGACATTTCTTTTTTTTTTTAGA
AAAACATCGAAGTGATGGGTGATGATAGTGATGATAATTTGGAAGTAAAT
TTTGCCTTATTTTTTTAACTTTTAATGAATCTCGGTCGTCTTTTTAAAAA
AAAGAGTAAAACACAGAAAAAAGAAAATTTTGTTCACTGTTTTTTTTAGT
TAGCTGAAGTGAAATTCCTTTAACTATTAACTACTTTTTGAAATTTATCT
ATCGCTCGCAATACACTTGTACCTTTAGGGAACTAATTTTCGCGGGAACT
AATTTTGTCTAAAAATTTCAAATATCTCTCTAGGAAAATGAAAGAATTTG
AGCAAAAAGTGGGTGTCAAGCACAAATATTAGTTCCAAGAAATACAAATA
TTTCAGACCAACCCTCTAAGCGTGAAAATTAGTTCACACAAAAATTAGTT
CCCTTAACTCCTAACAATGTGACATATAAAAAATGAAAAATATTTGTTTT
ATGCAGAATGCTGAACAAAACACGCCAATCAACAATCAACAATCAAGAAT
ATTTCGGAATGGCAGCCAAATACGACAGCCAGGTTCTTCTACAAGAACAC
TGCCAGAACATTCAGGTTCCCCCACAAGACCACTACCAGAACAGCCAGGT
TCCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACT
GCCAGAACAGCCACGGTCCTCCTCCCATCCACAACAGCCTTCACAGGAAA
TCAATTCTTCTACAACTACAGGTGCTACAGCTGATAATCGGCAAAATCTA
AGGGACTTATTCCCGAACTTAACTGACTGGCAAATTTGTGAAATACTTGA
ATCTTATTCAGATATGGAAGAAGCAGCAAGTTTTGCTGCAGAGATTTCGG
AAAAAAACGAGAAAGGAGCAACAATGGAATCTTTAGAAGACGTTTTTTCG
TATTTTGAAAAGAAATTGCATCCATCGAGGCAAACACTTAGAGTTGAAGA
AAAACATATTTTCTCAGATGTTTTGGCATTCTATAAAGGTAGAGATTTTG
ATCCAACAAAGAAACTTCGTGTCATTATAGAAAACGGGCCTGGCATCGAC
GCTGGAGGTTTAACAAGACATATGTTCGACGTTGTATTTCAAATGTTACG
TAAATCCGATGGAGAGAACAGATATTTTGAAGGAGAGAGATTTTCTCTAC
TCCCTATTTGTTCCTCAAGAACCGCCCTTTCAGAAATTTTCATATACATA
GGTAAAATCATTGGGCATGCCTTGTTGCATGGAATCAGAGTTATTCAAAT
CCCTACAGTGGCATATTTTTACATAGCTACCCAAGATATCACACAGTGTT
TGGAGTATTTAGATGCGGATGATGGTAGATATTGGGTTCATATTTCTTTA
CACACAATGTTATTAATATCTAGTTCCATATTTTTCAATGTTAAATCTGC
TGTTTTTGAGGGAAAATTTTGTTTTTGAG

Coding sequence (CDS) from alignment at sc0002088:9831..13609-

>TCONS_00039383 ID=TCONS_00039383|Name=TCONS_00039383|organism=Clytia hemisphaerica|type=CDS|length=7830bp|location=Sequence derived from alignment at sc0002088:9831..13609- (Clytia hemisphaerica)
AGCCAGGTTCCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACA
AGACCACTGCCAGAACAGCCACGGTCCTCCTCCCATCCACAACAGCCTTC
ACAGGAAATCAATTCTTCTACAACTACAGGTGCTACAGCTGATAATCGGC
AAAATCTAAGGGACTTATTCCCGAACTTAACTGACTGGCAAATTTGTGAA
ATACTTGAATCTTATTCAGATATGGAAGAAGCAGCAAGTTTTGCTGCAGA
GATTTCGGAAAAAAACGAGAAAGGAGCAACAATGGAATCTTTAGAAGACG
TTTTTTCGTATTTTGAAAAGAAATTGCATCCATCGAGGCAAACACTTAGA
GTTGAAGAAAAACATATTTTCTCAGATGTTTTGGCATTCTATAAAGGTAG
AGATTTTGATCCAACAAAGAAACTTCGTGTCATTATAGAAAACGGGCCTG
GCATCGACGCTGGAGGTTTAACAAGACATATGTTCGACGTTGTATTTCAA
ATGTTACGTAAATCCGATGGAGAGAACAGATATTTTGAAGGAGAGAGATT
TTCTCTACTCCCTATTTGTTCCTCAAGAACCGCCCTTTCAGAAATTTTCA
TATACATAGGTAAAATCATTGGGCATGCCTTGTTGCATGGAATCAGAGTT
ATTCAAATCCCTACAGTGGCATATTTTTACATAGCTACCCAAGATATCAC
ACAGTGTTTGGAGTATTTAGATGCGGATGATGGTAGATATTGGGTTCATA
TTTCTTTACACACAATGTTATTAATATCTAGTTCCATATTTTTCAATGTT
AAATCTGCTGTTTTTGAGGGAAAATTTTGTTTTTGAAATGCTGAACAAAA
CACGCCAATCAACAATCAACAATCAAGAATATTTCGGAATGGCAGCCAAA
TACGACAGCCAGGTTCTTCTACAAGAACACTGCCAGAACAAAAACATCGA
AGTGATGGGTGATGATAGTGATGATAATTTGGAAGTTCGAGTATGTCAAG
TACATCAGTGGCCAGCTTGTATCACCAACATTGGGGCAAAATGTGTCTTT
CGATAGCACAACAGTTCTTTCAATTAGCCGTCAGGGTGACATTTATCTCC
GAGCAACACATAATCTTATGTATAGCTATGCAATTTATGCTAATCATTTG
GCTTTTGTTTCCCTGCCGCTTTTACCTCCTCATGTTTTAGTAGTAATATT
GTCATATACTTATTTTAGGGAAGAAAAAATGTATAATAATAGAAATAATA
GCACTGGAAGAATTGTCTCAAGAATTATAGGCAATTCTGCTAACGGCATA
ATTGCTGAAAGAAATCGGCTGTTTCGAAGAAACAACAATAATGACACTCC
AAAATCAAAGAAAATAAAGCTCATTGCTAAAGATGTCTATTTGCTAAAAA
AGGACACCACAACTATGGCTCGAGGAACAGAAAAATGCAAACTCCATGAA
AACGGCCAAGTTATCACAGCCTTTCAAATAGAAGGTTATCTCTCAGAGGA
ACAACTATATGAAAGGCTGGAAGAGTGTTTTTCCTCAGTTTTAGATTTCT
CACATCCGGTTCCCAGAGCCAGGTTCCTCCACAAGACCACTGCCAGAACA
GCCAGGTTCCTCTACAAGACCACTGCCAGAACAGCCACGGTCCTCCTCCC
ATCCACAACAGCCTTCACAGGAAATCAATTCTTCTACAACTACAGGTGCT
ACAGCTGATAATCGGCAAAATCTAAGGGACTTATTCCCGAACTTAACTGA
CTGGCAAATTTGTGAAATACTTGAATCTTATTCAGATATGGAAGAAGCAG
CAAGTTTTGCTGCAGAGATTTCGGAAAAAAACGAGAAAGGAGCAACAATG
GAATCTTTAGAAGACGTTTTTTCGTATTTTGAAAAGAAATTGCATCCATC
GAGGCAAACACTTAGAGTTGAAGAAAAACATATTTTCTCAGATGTTTTGG
CATTCTATAAAGGTAGAGATTTTGATCCAACAAAGAAACTTCGTGTCATT
ATAGAAAACGGGCCTGGCATCGACGCTGGAGGTTTAACAAGACATATGTT
CGACGTTGTATTTCAAATGTTACGTAAATCCGATGGAGAGAACAGATATT
TTGAAGGAGAGAGATTTTCTCTACTCCCTATTTGTTCCTCAAGAACCGCC
CTTTCAGAAATTTTCATATACATAGGTAAAATCATTGGGCATGCCTTGTT
GCATGGAATCAGAGTTATTCAAATCCCTACAGTGGCATATTTTTACATAG
CTACCCAAGATATCACACAGTGTTTGGAGTATTTAGATGCGGATGATGGT
AGATATTGGGTTCATATTTCTTTACACACAATGTTATTAATATCTAGTTC
CATATTTTTCAATGTTAAATCTGCTGTTTTTGAGGGAAAATTTTGTTTTT
GAAATGCTGAACAAAACACGCCAATCAACAATCAACAATCAAGAATATTT
CGGAATGGCAGCCAAATACGACAGCCAGGTTCTTCTACAAGAACACTGCC
AGAACAAAAACATCGAAGTGATGGGTGATGATAGTGATGATAATTTGGAA
GTTCGAGTATGTCAAGTACATCAGTGGCCAGCTTGTATCACCAACATTGG
GGCAAAATGTGTCTTTCGATAGCACAACAGTTCTTTCAATTAGCCGTCAG
GGTGACATTTATCTCCGAGCAACACATAATCTTATGTATAGCTATGCAAT
TTATGCTAATCATTTGGCTTTTGTTTCCCTGCCGCTTTTACCTCCTCATG
TTTTAGTAGTAATATTGTCATATACTTATTTTAGGGAAGAAAAAATGTAT
AATAATAGAAATAATAGCACTGGAAGAATTGTCTCAAGAATTATAGGCAA
TTCTGCTAACGGCATAATTGCTGAAAGAAATCGGCTGTTTCGAAGAAACA
ACAATAATGACACTCCAAAATCAAAGAAAATAAAGCTCATTGCTAAAGAT
GTCTATTTGCTAAAAAAGGACACCACAACTATGGCTCGAGGAACAGAAAA
ATGCAAACTCCATGAAAACGGCCAAGTTATCACAGCCTTTCAAATAGAAG
GTTATCTCTCAGAGGAACAACTATATGAAAGGCTGGAAGAGTGTTTTTCC
TCAGTTTTAGATTTCTCACATCCGGTTCCCAGAGCCAGGTTCCTCCACAA
GACCACTGCCAGAACAGCCAGGTTCCTCTACAAGACCACTGCCAGAACAG
CCACGGTCCTCCTCCCATCCACAACAGCCTTCACAGGAAATCAATTCTTC
TACAACTACAGGTGCTACAGCTGATAATCGGCAAAATCTAAGGGACTTAT
TCCCGAACTTAACTGACTGGCAAATTTGTGAAATACTTGAATCTTATTCA
GATATGGAAGAAGCAGCAAGTTTTGCTGCAGAGATTTCGGAAAAAAACGA
GAAAGGAGCAACAATGGAATCTTTAGAAGACGTTTTTTCGTATTTTGAAA
AGAAATTGCATCCATCGAGGCAAACACTTAGAGTTGAAGAAAAACATATT
TTCTCAGATGTTTTGGCATTCTATAAAGGTAGAGATTTTGATCCAACAAA
GAAACTTCGTGTCATTATAGAAAACGGGCCTGGCATCGACGCTGGAGGTT
TAACAAGACATATGTTCGACGTTGTATTTCAAATGTTACGTAAATCCGAT
GGAGAGAACAGATATTTTGAAGGAGAGAGATTTTCTCTACTCCCTATTTG
TTCCTCAAGAACCGCCCTTTCAGAAATTTTCATATACATAGGTAAAATCA
TTGGGCATGCCTTGTTGCATGGAATCAGAGTTATTCAAATCCCTACAGTG
GCATATTTTTACATAGCTACCCAAGATATCACACAGTGTTTGGAGTATTT
AGATGCGGATGATGGTAGATATTGGGTTCATATTTCTTTACACACAATGT
TATTAATATCTAGTTCCATATTTTTCAATGTTAAATCTGCTGTTTTTGAG
GGAAAATTTTGTTTTTGAAATGCTGAACAAAACACGCCAATCAACAATCA
ACAATCAAGAATATTTCGGAATGGCAGCCAAATACGACAGCCAGGTTCTT
CTACAAGAACACTGCCAGAACAAAAACATCGAAGTGATGGGTGATGATAG
TGATGATAATTTGGAAGTTCGAGTATGTCAAGTACATCAGTGGCCAGCTT
GTATCACCAACATTGGGGCAAAATGTGTCTTTCGATAGCACAACAGTTCT
TTCAATTAGCCGTCAGGGTGACATTTATCTCCGAGCAACACATAATCTTA
TGTATAGCTATGCAATTTATGCTAATCATTTGGCTTTTGTTTCCCTGCCG
CTTTTACCTCCTCATGTTTTAGTAGTAATATTGTCATATACTTATTTTAG
GGAAGAAAAAATGTATAATAATAGAAATAATAGCACTGGAAGAATTGTCT
CAAGAATTATAGGCAATTCTGCTAACGGCATAATTGCTGAAAGAAATCGG
CTGTTTCGAAGAAACAACAATAATGACACTCCAAAATCAAAGAAAATAAA
GCTCATTGCTAAAGATGTCTATTTGCTAAAAAAGGACACCACAACTATGG
CTCGAGGAACAGAAAAATGCAAACTCCATGAAAACGGCCAAGTTATCACA
GCCTTTCAAATAGAAGGTTATCTCTCAGAGGAACAACTATATGAAAGGCT
GGAAGAGTGTTTTTCCTCAGTTTTAGATTTCTCACATCCGGTTCCCAGAG
CCAGGTTCCTCCACAAGACCACTGCCAGAACAGCCAGGTTCCTCTACAAG
ACCACTGCCAGAACAGCCACGGTCCTCCTCCCATCCACAACAGCCTTCAC
AGGAAATCAATTCTTCTACAACTACAGGTGCTACAGCTGATAATCGGCAA
AATCTAAGGGACTTATTCCCGAACTTAACTGACTGGCAAATTTGTGAAAT
ACTTGAATCTTATTCAGATATGGAAGAAGCAGCAAGTTTTGCTGCAGAGA
TTTCGGAAAAAAACGAGAAAGGAGCAACAATGGAATCTTTAGAAGACGTT
TTTTCGTATTTTGAAAAGAAATTGCATCCATCGAGGCAAACACTTAGAGT
TGAAGAAAAACATATTTTCTCAGATGTTTTGGCATTCTATAAAGGTAGAG
ATTTTGATCCAACAAAGAAACTTCGTGTCATTATAGAAAACGGGCCTGGC
ATCGACGCTGGAGGTTTAACAAGACATATGTTCGACGTTGTATTTCAAAT
GTTACGTAAATCCGATGGAGAGAACAGATATTTTGAAGGAGAGAGATTTT
CTCTACTCCCTATTTGTTCCTCAAGAACCGCCCTTTCAGAAATTTTCATA
TACATAGGTAAAATCATTGGGCATGCCTTGTTGCATGGAATCAGAGTTAT
TCAAATCCCTACAGTGGCATATTTTTACATAGCTACCCAAGATATCACAC
AGTGTTTGGAGTATTTAGATGCGGATGATGGTAGATATTGGGTTCATATT
TCTTTACACACAATGTTATTAATATCTAGTTCCATATTTTTCAATGTTAA
ATCTGCTGTTTTTGAGGGAAAATTTTGTTTTTGAAATGCTGAACAAAACA
CGCCAATCAACAATCAACAATCAAGAATATTTCGGAATGGCAGCCAAATA
CGACAGCCAGGTTCTTCTACAAGAACACTGCCAGAACAAAAACATCGAAG
TGATGGGTGATGATAGTGATGATAATTTGGAAGTTCGAGTATGTCAAGTA
CATCAGTGGCCAGCTTGTATCACCAACATTGGGGCAAAATGTGTCTTTCG
ATAGCACAACAGTTCTTTCAATTAGCCGTCAGGGTGACATTTATCTCCGA
GCAACACATAATCTTATGTATAGCTATGCAATTTATGCTAATCATTTGGC
TTTTGTTTCCCTGCCGCTTTTACCTCCTCATGTTTTAGTAGTAATATTGT
CATATACTTATTTTAGGGAAGAAAAAATGTATAATAATAGAAATAATAGC
ACTGGAAGAATTGTCTCAAGAATTATAGGCAATTCTGCTAACGGCATAAT
TGCTGAAAGAAATCGGCTGTTTCGAAGAAACAACAATAATGACACTCCAA
AATCAAAGAAAATAAAGCTCATTGCTAAAGATGTCTATTTGCTAAAAAAG
GACACCACAACTATGGCTCGAGGAACAGAAAAATGCAAACTCCATGAAAA
CGGCCAAGTTATCACAGCCTTTCAAATAGAAGGTTATCTCTCAGAGGAAC
AACTATATGAAAGGCTGGAAGAGTGTTTTTCCTCAGTTTTAGATTTCTCA
CATCCGGTTCCCAGAGCCAGGTTCCTCCACAAGACCACTGCCAGAACAGC
CAGGTTCCTCTACAAGACCACTGCCAGAACAGCCACGGTCCTCCTCCCAT
CCACAACAGCCTTCACAGGAAATCAATTCTTCTACAACTACAGGTGCTAC
AGCTGATAATCGGCAAAATCTAAGGGACTTATTCCCGAACTTAACTGACT
GGCAAATTTGTGAAATACTTGAATCTTATTCAGATATGGAAGAAGCAGCA
AGTTTTGCTGCAGAGATTTCGGAAAAAAACGAGAAAGGAGCAACAATGGA
ATCTTTAGAAGACGTTTTTTCGTATTTTGAAAAGAAATTGCATCCATCGA
GGCAAACACTTAGAGTTGAAGAAAAACATATTTTCTCAGATGTTTTGGCA
TTCTATAAAGGTAGAGATTTTGATCCAACAAAGAAACTTCGTGTCATTAT
AGAAAACGGGCCTGGCATCGACGCTGGAGGTTTAACAAGACATATGTTCG
ACGTTGTATTTCAAATGTTACGTAAATCCGATGGAGAGAACAGATATTTT
GAAGGAGAGAGATTTTCTCTACTCCCTATTTGTTCCTCAAGAACCGCCCT
TTCAGAAATTTTCATATACATAGGTAAAATCATTGGGCATGCCTTGTTGC
ATGGAATCAGAGTTATTCAAATCCCTACAGTGGCATATTTTTACATAGCT
ACCCAAGATATCACACAGTGTTTGGAGTATTTAGATGCGGATGATGGTAG
ATATTGGGTTCATATTTCTTTACACACAATGTTATTAATATCTAGTTCCA
TATTTTTCAATGTTAAATCTGCTGTTTTTGAGGGAAAATTTTGTTTTTGA
AATGCTGAACAAAACACGCCAATCAACAATCAACAATCAAGAATATTTCG
GAATGGCAGCCAAATACGACAGCCAGGTTCTTCTACAAGAACACTGCCAG
AACAAAAACATCGAAGTGATGGGTGATGATAGTGATGATAATTTGGAAGT
TCGAGTATGTCAAGTACATCAGTGGCCAGCTTGTATCACCAACATTGGGG
CAAAATGTGTCTTTCGATAGCACAACAGTTCTTTCAATTAGCCGTCAGGG
TGACATTTATCTCCGAGCAACACATAATCTTATGTATAGCTATGCAATTT
ATGCTAATCATTTGGCTTTTGTTTCCCTGCCGCTTTTACCTCCTCATGTT
TTAGTAGTAATATTGTCATATACTTATTTTAGGGAAGAAAAAATGTATAA
TAATAGAAATAATAGCACTGGAAGAATTGTCTCAAGAATTATAGGCAATT
CTGCTAACGGCATAATTGCTGAAAGAAATCGGCTGTTTCGAAGAAACAAC
AATAATGACACTCCAAAATCAAAGAAAATAAAGCTCATTGCTAAAGATGT
CTATTTGCTAAAAAAGGACACCACAACTATGGCTCGAGGAACAGAAAAAT
GCAAACTCCATGAAAACGGCCAAGTTATCACAGCCTTTCAAATAGAAGGT
TATCTCTCAGAGGAACAACTATATGAAAGGCTGGAAGAGTGTTTTTCCTC
AGTTTTAGATTTCTCACATCCGGTTCCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023750XLOC_023750Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039383-exon-sc0002088-1575043694:12999..13609TCONS_00039383-exon-sc0002088-1575043694:12999..13609Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1575043694:11687..11819TCONS_00039383-exon-sc0002088-1575043694:11687..11819Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1575043694:11216..11260TCONS_00039383-exon-sc0002088-1575043694:11216..11260Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1575043694:10701..10803TCONS_00039383-exon-sc0002088-1575043694:10701..10803Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1575043694:9831..10667TCONS_00039383-exon-sc0002088-1575043694:9831..10667Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1510915933:12999..13609TCONS_00039383-exon-sc0002088-1510915933:12999..13609Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1510915933:11687..11819TCONS_00039383-exon-sc0002088-1510915933:11687..11819Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1510915933:11216..11260TCONS_00039383-exon-sc0002088-1510915933:11216..11260Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1510915933:10701..10803TCONS_00039383-exon-sc0002088-1510915933:10701..10803Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1510915933:9831..10667TCONS_00039383-exon-sc0002088-1510915933:9831..10667Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1491911889:12999..13609TCONS_00039383-exon-sc0002088-1491911889:12999..13609Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1491911889:11687..11819TCONS_00039383-exon-sc0002088-1491911889:11687..11819Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1491911889:11216..11260TCONS_00039383-exon-sc0002088-1491911889:11216..11260Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1491911889:10701..10803TCONS_00039383-exon-sc0002088-1491911889:10701..10803Clytia hemisphaericaexon
TCONS_00039383-exon-sc0002088-1491911889:9831..10667TCONS_00039383-exon-sc0002088-1491911889:9831..10667Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039383-proteinTCONS_00039383-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002088supercontigsc0002088:9831..13609 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.606856	0.364173	0.237847	0.103421	2.99023	2.53703	1.92052	1.6575	0.354036	0.487257	0.472944	0.373073	0.512263	1.06398	0.821722	0.810718	1.24404	1.04163	0.272928	0.207708	1.30889	0.957645	0.535238	0.5596	0.601435	0.335479	0.384055	0.375718	0.0777188	0.184761
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000569HECT_dom
Vocabulary: Molecular Function
TermDefinition
GO:0004842ubiquitin-protein transferase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004842 ubiquitin-protein transferase activity
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039383 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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