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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039303 ID=TCONS_00039303|Name=TCONS_00039303|organism=Clytia hemisphaerica|type=transcript|length=249bp
TTTATAGACGTATTGACCCTGACATCAATAGCTCTACTCAAGAGCCAGAA
GCTTGGCAAACGTGGATGCAGCAGGTTTACAACTGGGTGATCAACCAAGT
GCATGAACTCATTAAGGGATTTTGCCCCCAACCATCACACCAAGATGACC
TTCGAGAGGGAGACAACTGGCTGGATTATTTCAGTCAGAAAACTTGCGAC
TTCGCCAAAGATGTTCGtttgGATTGCTTTTGGGTCCCAGAACCGCCAG Run BLAST on NCBI transcript from alignment at sc0002070:13286..14938- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039303 ID=TCONS_00039303|Name=TCONS_00039303|organism=Clytia hemisphaerica|type=transcript|length=1653bp|location=Sequence derived from alignment at sc0002070:13286..14938- (Clytia hemisphaerica)
TTTATAGACGTATTGACCCTGACATCAATAGCTCTACTCAAGAGCCAGAA
GCTTGGCAAACGTGGATGCAGCAGGTTTACAACTGGGTGATCAACCAAGT
GCATGAACTCATTAAGGGATTTTGGTAATATTCTTTATCTGATTTTATCT
ACAAGCTTTTCTTTAAAATAAGCACTTTCATAAATTTTTACTGAAATTTT
CTTATTTTTCAATTGCGCTTTGCTCTTTGAGTTGTTCTCGTGTTTCAGTT
AAAAATTTTAACTGAAAATCATTTTGACTTTCTGGCGCACAACAACATTC
TTGCTGGATTTTCCGCGGGAGGCCTATTTTCCTCAGATGGTTAATTTCCA
TGGGTATTCAGAGGTTTACCGTGCCCATAAGAAAATTGATGGCCAACTGT
TATCATGTTATTTTAAAGTTAAAAAAAAAAGACTTTTCTGATCGGCAAAT
TCAAAAATTCAAACTTCGATAGTGAGTCTAGAAATGGGTCCTAAATAGAA
ACTTTGGCACCGTTGGCGTTGGAAAGAATCAAACGGACAAGAACATTTTG
GCTGAAAACAAACATGGTAAACAAACATAGCTCTGATGAACTATTGCCAG
TAAACAGAGACACCCCTGTCTCACAGCCCAGTTGAAGTTTTGAATTTCCT
ACAGCGAGATCCCAATGGGGATAGATAAAGAAGTCCAGTGGGGATTTTCA
AATTGAATTTTAAAAGGGGATAAAAGAAATTCAATTTCCCAGTGGGGCTA
AAATTGTAGGATAATTTTCCCACCAGGGACGAAATTTTTTGCGAAATTCT
CAAATGGGTAGGGAATCTCACCGTGTCAGTGACGCAGGGGTGTACAGAGC
GCCTGTCAATTACCCTTTTCAGAATGAAGGCGTACGTATATCCCTCCCCT
AAGATTTAAAATTGGACTATTATTTGACATAACGAAGCAGAGCCCTTTTT
CAGGAAAATGCATCCTTACAAAGTCTTCTGACATTACGTTACTCATACAA
AAGCTGATTGTACACGAGTGACGTATTGGGCAGAATAGCCCAGAAAAGTC
ACGTAAATTTGTATTGGCTTTAATTTGGCTGCTGGAAAAACTAAAGTTTT
GACAGGAATTTCATTTAGCGGGATTTTGATGAGTCTGCAAATTCGGCCGA
ATTTTCTTTCCGTCAGAATTGTTTTCCTTTAATGTTTTTAAAGTTTTTTA
TTCGATTTCGTTATAGCCCCCAACCATCACACCAAGATGACCTTCGAGAG
GGAGACAACTGGCTGGATTATTTCAGTCAGAAAACTTGCGACTTCGCCAA
AGATGTTCGGTAAGAATCATTGATATAATAATAAAAACACTCTATCCCTA
ATATAATATTGAATTTTTTTATTAATAAAGACAACTTTTGAGAGCTACAA
ATGCTGAGTTCTAAATTCAAGTGAACCCTCGTTGATTCGAACTTTATATT
ATTCGTCAAGAAGAAAATCTCATAAAATAAAAAATACTTTATATGCATCG
AATCCCTCTGTAGTTTGAAAAAAATAGCAGATTTACCATAAAAGCTCGAA
TTAGTGAGAGGCAATTGTAATCTGAAAATAATCTATCATGTTCAGTATTT
TTTGTACTTTTTAATTTTTAGTTTGGATTGCTTTTGGGTCCCAGAACCGC
CAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039303-exon-sc0002070-1575043694:14815..14938 | TCONS_00039303-exon-sc0002070-1575043694:14815..14938 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1575043694:13630..13722 | TCONS_00039303-exon-sc0002070-1575043694:13630..13722 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1575043694:13286..13317 | TCONS_00039303-exon-sc0002070-1575043694:13286..13317 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1510915933:14815..14938 | TCONS_00039303-exon-sc0002070-1510915933:14815..14938 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1510915933:13630..13722 | TCONS_00039303-exon-sc0002070-1510915933:13630..13722 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1510915933:13286..13317 | TCONS_00039303-exon-sc0002070-1510915933:13286..13317 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1491911889:14815..14938 | TCONS_00039303-exon-sc0002070-1491911889:14815..14938 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1491911889:13630..13722 | TCONS_00039303-exon-sc0002070-1491911889:13630..13722 | Clytia hemisphaerica | exon |
| TCONS_00039303-exon-sc0002070-1491911889:13286..13317 | TCONS_00039303-exon-sc0002070-1491911889:13286..13317 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002070 | supercontig | sc0002070:13286..14938 - |
Blast
The following BLAST results are available for this feature:
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