|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039282 ID=TCONS_00039282|Name=TCONS_00039282|organism=Clytia hemisphaerica|type=transcript|length=960bp
CGACCTTATCAACAATGTCCAAACTTAAACACCAACAATCATCAAACGAC
CAACAGAAAGAACCATAGGGGATAGGATATCCCAAAAGGAACTGGCTGAG
AAAATCGAACTACAAAACCAGACACTTTCCAACAACGACGCCTTTCATAC
CTCACCTCAATACGAATCCCTTTGCACAAAACCAACAACacaaattaatt
ttcatttgaacaCTCCAAACAAGTTAGATTTTGGTGGAAAATTAGATCTT
GGTGCAAAGTCCATCGACCCGATTGGCACCATTTCCGACGACTCCGACAA
AATGAGCACCGCATCCAACGATACAATACAATCAACAGTATCAACCATGT
CGAAAAAACGAACACACAAAAGATCCACAGACGACGAGAAAGACAAGAAA
GACNTTCCGACGACTCCGACAAAATGAGCACCGCATCCAACGATACAATA
CAATCAACAGTATCAACCATGTCGAAAAAACGAACACACAAAAGGTCCAC
AGACGTCGAGAAAGACAAGAAAGACACCGAGAGAGAGATGGAAAAacgca
aaaagaagaaaaagaagaagaagcatGACCAACAAACAGAGAAGAATTAA
TTTTAACTTTTACATTATTCATAGTTTATTTTTGAGCTCTCTTTAGGCTA
GACTTTTTAAATGTCAGAGGAATAAAATCCTCTGAGTCTAAGAGAAAGGC
ATTGAGCTACAGCTTTGTCAATTGTGACCTCGTCTGCCTCCTTGACACTC
ATCTTGACGATGAGTGTGAAGGTATTTTATATAAGCTCTGGAAAGGAGAA
TGAAAGTTCTCCCACATCATCAACTCACCTCAAAATGGGGGAATCGCCTT
TTTGTCAAAACCAGGGCACTCCATCACTGAGGTCAGAAAAGACGAGACTG
GACGATTCCTTTTTCTTAGACTCAACTCTGACAACCAAAACTTTCTCATA
GCCTGCATTT Run BLAST on NCBI transcript from alignment at sc0002056:9869..10828 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039282 ID=TCONS_00039282|Name=TCONS_00039282|organism=Clytia hemisphaerica|type=transcript|length=960bp|location=Sequence derived from alignment at sc0002056:9869..10828 (Clytia hemisphaerica)
AAATGCAGGCTATGAGAAAGTTTTGGTTGTCAGAGTTGAGTCTAAGAAAA
AGGAATCGTCCAGTCTCGTCTTTTCTGACCTCAGTGATGGAGTGCCCTGG
TTTTGACAAAAAGGCGATTCCCCCATTTTGAGGTGAGTTGATGATGTGGG
AGAACTTTCATTCTCCTTTCCAGAGCTTATATAAAATACCTTCACACTCA
TCGTCAAGATGAGTGTCAAGGAGGCAGACGAGGTCACAATTGACAAAGCT
GTAGCTCAATGCCTTTCTCTTAGACTCAGAGGATTTTATTCCTCTGACAT
TTAAAAAGTCTAGCCTAAAGAGAGCTCAAAAATAAACTATGAATAATGTA
AAAGTTAAAATTAATTCTTCTCTGTTTGTTGGTCatgcttcttcttcttt
ttcttctttttgcgtTTTTCCATCTCTCTCTCGGTGTCTTTCTTGTCTTT
CTCGACGTCTGTGGACCTTTTGTGTGTTCGTTTTTTCGACATGGTTGATA
CTGTTGATTGTATTGTATCGTTGGATGCGGTGCTCATTTTGTCGGAGTCG
TCGGAANGTCTTTCTTGTCTTTCTCGTCGTCTGTGGATCTTTTGTGTGTT
CGTTTTTTCGACATGGTTGATACTGTTGATTGTATTGTATCGTTGGATGC
GGTGCTCATTTTGTCGGAGTCGTCGGAAATGGTGCCAATCGGGTCGATGG
ACTTTGCACCAAGATCTAATTTTCCACCAAAATCTAACTTGTTTGGAGtg
ttcaaatgaaaattaatttgtGTTGTTGGTTTTGTGCAAAGGGATTCGTA
TTGAGGTGAGGTATGAAAGGCGTCGTTGTTGGAAAGTGTCTGGTTTTGTA
GTTCGATTTTCTCAGCCAGTTCCTTTTGGGATATCCTATCCCCTATGGTT
CTTTCTGTTGGTCGTTTGATGATTGTTGGTGTTTAAGTTTGGACATTGTT
GATAAGGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039282-exon-sc0002056-1491911889:9869..10828 | TCONS_00039282-exon-sc0002056-1491911889:9869..10828 | Clytia hemisphaerica | exon |
| TCONS_00039282-exon-sc0002056-1510915933:9869..10828 | TCONS_00039282-exon-sc0002056-1510915933:9869..10828 | Clytia hemisphaerica | exon |
| TCONS_00039282-exon-sc0002056-1575043694:9869..10828 | TCONS_00039282-exon-sc0002056-1575043694:9869..10828 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002056 | supercontig | sc0002056:9869..10828 . |
Blast
The following BLAST results are available for this feature:
|
