TCONS_00039265 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039265
Unique NameTCONS_00039265
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1848

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039265 ID=TCONS_00039265|Name=TCONS_00039265|organism=Clytia hemisphaerica|type=transcript|length=1848bp
TGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGAC
TCACAGACACTTAGTTCTgatgcaaaaaattcaaagaagtACACTGTTTA
CAAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGAT
ATAATGAGTTCCATACACTGTATGATAAGGTCAAAAAGGTTTATCCTGAA
CAGCTTCACAACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTT
TGACCCAGATTTCATTAAAATGCGAAGAGAGGGTCTTGATGATTTTGTAA
GGAAAATATTAGGATTACCAAATATATTCAACCATGCTGACGTCAGAGAA
TTCTTCCAATTGGATAACCCCCGAAATTCTTCAATAAATATTGATGAAGA
AGAAGATGAAGTTGCAGAAGTTGCATCAGAGTTGGAAAATGTTGACCTTG
GGCAATCTGAATCAAAGAAAGCGAAACCAAGTGATTTTGCATTCTTAAAA
GTGATTGGTAAAGGAAGTTTTGGAAAGGTTTTGCTGGCAAAACacaaaac
tgaagaaaaattttatGCAATCAAAGTCCTGCACAAAGCAGCTATTCGTA
AAAGAAATGAGGCGCGACATATCATGGCTGAAAGAAATgttcttttgaag
aatgtgAAGCATCCTTTCCTTGTTGGGCTGCACTACTCATTCCAAACTTC
AGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAGTTGTTCT
TCCATCTTCAACGAGAAAGATACTTCCCAGAACATAGGGCAAGATTTTAT
GCAGCTGAAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGATTAT
TTACAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGGGTCATG
TTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGA
ACAACATCAACCTTTTGCGGGACACCAGAGTATTTGGCCCCAGAAGTGTT
GCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGGAGCTG
TCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAGACACT
GCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACGaaccaa
tatttcacaaagcgCAAGACACCTTTTAGAACAGCTCCTCCAAAAAGAAA
AGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGACGAGATCCGATCA
CATCCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAAT
CGAGCCCACCTATAACCCCAATGTTAGTGGTCAATTAGATTTGAAGCATT
TCGATCCAGAATTTGTAAGGGAGCCAGTACCTGCATCTGTGACAAAGGCC
GATGGAAGTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATT
TGTTGGATTCACTTACGTACCCCAATCCGAAGATTTAGTCGAATAAATGC
ATTCACCTGTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAA
AATATAGTTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTAT
AACGTCGATGGACATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTC
CATTTTTTCTGTAATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGT
Aaggcaaaaattttattttacttttttttgtactttttgttttgatttag
atAACTTATGAACAATTCagaattataaaaaacaacCTCTAGCAACTTTT
TAATAATAgagaacaaatttaaaacagGTTGGGAAAATTATTAACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..22863-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039265 ID=TCONS_00039265|Name=TCONS_00039265|organism=Clytia hemisphaerica|type=transcript|length=12853bp|location=Sequence derived from alignment at sc0002054:10011..22863- (Clytia hemisphaerica)
TGCAAACAACAAATAATAGTAACAAAGATCTAGGGATTAGTGTTCCTGAC
TCACAGACACTTAGTTCTGATGCAAAAAATTCAAAGAAGTACACTGTAAG
TATAAGTATTCTAAATAATTTTCATTCAAGTTTTGCATTTTTAACACCTT
TTGTCGATTTGTCAAATTATTTGCATTTGAAAATTATTTATATTGAATTG
TTTTATGTTTTAAGGTTTACAAGGTAGCTGTTGAGNCACCTTTTGTCGAT
TTGTCAAATTATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATGT
TTTAAGGTTTACAAGGTAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGT
TCTTCGAAGATATAATGAGTTCCATACACTGTATGATAAGGTTAGAAATT
TATGGCTTGGAAACGTTTTGTGCTACAATTGATAATTTTTTGTATTTGCA
CTGTTTCTGTTTACCTTATTCTGTGCTGCTGTGTAATCAAAAATTTTCTT
CTAGAAATTTCTTGAAAATATTTGTATTAAAAACTCATTCTGAAAAAGAA
AAAGATTAAAGTGGCATTTTGTCATCTATCATAAGTGTAACTTAATTACA
ACTAATGTTTCCTTGATAGGAAAACCAAAACCTTTTAATTGTGACTCTGT
AACTATTCTTGTAGCAAAAAAATGCTCAAACAATATGTATGCAAATCCTG
TGTTAATGCATCTTTTGCTTTTTTAGCTGACAACTTTTTGACATGTTTAT
TTACATATGAATCATTCATTTTTTCAATATAGGTCAAAAAGGTTTATCCT
GAACAGCTTCACAACTTTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAA
TTTTGACCCAGGTAAAAATTTTATACGCCCTCTATCAAATTATCCCTCAA
AATTTTAAATTCAAAAACTGAAATGAAAATTTAAAAGATTAAAGAGGTAT
TTCATTTCACTGGAGTTTGTTTACGTGAATAAAAAACAAAGAGATTGATT
TTATCAACTTTGTTTAGATAAGCTTAATTTGATTTGCTCTGTTTTGATGA
TAAATCTTATAAACACCTTTGTGTTATAATCTTTGTAGAACTTTGCAGAA
GAATTTACATCATTTTTTGTTGCATTTTCTCATGTTCTTGTAATAAAGAT
ATTTTTGTTGTTTTCAATAAAAGAAACTAAAAGTTGCCATCTGGTGTATC
AAAAAGTAATAAATAATGAAAGACTTTCATAAAAAGAGAAACAAGTTTGA
TATATAAAAGTGAAATGTACTTGCTTTTTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
ACTATATTTGAAAAGCAATATCAGCCTGCCTCTTCATATTTACATCAAAA
AAATATCATACAAGTAAAAGATGTATCCTTATTTCTGTTCCCATACTTTG
ATTTGAAATTAAATCGTCTCCTACCTCTATTACTCTGCCATCACCATTGG
CGTCCTTGTCTCCTTGTGTTCTCGTCATACAAGTCAATTCATCTAAGTGA
ATGAAAATAAGCACATATCTATCCTTCCTTGCTGTGAAGAAAGTGCTTGA
CAAATAATTCAGTCATGGTTCTAATGCTTTTATCACTCCGTTCTTACAGA
TTTCATTAAAATGCGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATAT
TAGGATTACCAAATATATTCAACCAGTAAGTAATGATGAGAGTTGCTTGA
TTTTTCATGTTTTTCTACAACTCCTTATAAAATAAGATTAATACTATCAA
AATTATTTTTTTGTCAAACTAATTTAAATGTGAGATGGTTTTCTTATGTT
AATGCTCTCTTCCCATAGCGTCAGCCCCCCCTGGAAACTGGGGAAGGAAA
TCACTCTAAAATATTCCCGAAAAACTTAATGGTTGGCTTCAATTACTTAA
TTTAAAGTTCATGAAGCTGAAAAATTTTGTCTGCGGGGNAAATCACTCTA
AAATATTCCCGAAAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGT
TCATGAAGCTGAAAAATTTTGTCTGCGGGGGAATATTTTAATATGAAATA
TTCAAAATATGTAAAATATACTATCTTCTATCTTTTAATATTTTACTTGG
CTCTGCAACATCGATCACAGACACAGACAAAACTATCTTCTACTTTTTTT
TCCTGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATATGAAA
TATACTATCTTCTATCTTTTAATATTTTACTTGGCTCTGCAACATCGATC
ACAGACACAGACAAAACTATCTTCTACTTTTTTTTCCTGGGACAAATTTT
AGAAAGTGTAGATGGTGGCAAATCTTGAGAGCTATAAACAAATTTTTAAA
TTATTGGGGGACTTAACTTTTTGTCTGGGACCTAAACACTGGCTGAGGAT
ATGGCTCTTCCACGTTATAGGTGAAAAATACCAAAAATTAAAGAATTTGT
TAGAAAGTTGTTCTCAATCAGGTTTCAATCAAAATAAGAGTTCTATCTTT
CAAAAGGTTAACCTTCCAGTGCATTCTTAAAAAAAACAGTTTAATGACCT
GCTTCATTTTCATAGTGCTGACGTCAGAGAATTCTTCCAATTGGATAACC
CCCGAAATTCTTCAATAAATATTGATGAAGAAGAAGATGAAGTTGCAGAA
GTTGTAAGAATCCATTTTTGTTCGCATTGTATGATGTCGGTTATGCCAAA
TTATACAAACCACCAAAGAAATTCTGAAATTCTGAAAAAAGAGCCATTTA
AAAAAAGTTGGAAATGGCAGCAGTGTACAAGATACAAACTTTCCCTTTTT
TGATAAAATCTAGTTTCACCAGCCATTAATATTTTGTATTACTTTATACC
CTCAAGAAAGCTTTTTTATAAAACTAAAAGCTAAAAGCTTTTTAAATTTG
TTTTGGGAAATAGGCTCTCAAGAACTAAAGCATAATTTGAAAAAATATAT
AAAATCCCAGCATGTTGTACTTTCTTTCTATTGATAAACCTGTGTTGTCT
TGATCTGAAAATCTATTCAAAATAAAACTTTTCTTTTTCAAAATGTTAGA
GACTTTACTAATGAAAACTTTTTCTTCAAATATGGCTTATTTTCAGGTAC
TTATAATAAATTTTTTTAATTTTCTTAAATCTAAAATCAAACACTGTATT
TGTGTGGTCTGAGACTCGTTTTTGATACCTTCTTATCTTTCTAAGGCATC
AGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATCAAAGAAGTAAGTTT
ATTAAAGTCCATTTAAAGGAAATTATTCCAAAAACGAACTTTCATATTTG
CCTCTCTTGAGTTTGCATGGATTTATCTTTCAGAAACTAATTTCGTTTTC
AGTGAGCCTACCTTTGCTTTTATCCAATTTTAAGGTGTTTGTAATTGAGT
TTTTCAATTGATTTGTGAAATATCTGTCATCTTACTCGTTAATTTCACTG
ATAATGATGAAATATTCATCTTACAACTTCAGAGCGAAACCAAGTGATTT
TGCATTCTTAAAAGTGATTGGTAAAGGAAGTTTTGGAAAGGTAATAACTC
TGAACAGTAACATTTTTTCTTTGGAAAATATAAGATATCCTTGGGTTTTG
ATTTACCAAAATGTCTAAATTTATGTCCCCTTTGATTTAGTTTTCAATCA
TTCCCCTCGCTTTGATTTAGTGTTGTTGGAAATGATGAGTGTTTAATTGA
TAAAAGTACAATGATCAATGTTTGGAAGAAATCTAAACCATAAAGTTTCA
GCAAGTTTAACTTTTTTGATTTAGGTTTTGCTGGCAAAACACAAAACTGA
AGAAAAATTTTATGCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAA
GAAATGAGGTATGATACTTACCTCATTGTTTTTTCAGTTTTTTTTTAAAT
TGGAACAAGATCATTGCATTTGCAAAGACATAATGTAAAATAAAGTAATA
TTTTGAATTCGATGGATACTTTTTACAGGCGCGACATATCATGGCTGAAA
GAAATGTTCTTTTGAAGAATGTGAAGCATCCTTTCCTTGTTGTAAGTATT
TCATGCAAAATTAACGATTGAGGATTCATTTTCATCTCCAATTCAATACC
GATGCATAGAATATTTTATTCAAGAAAACCTTCGATAATGCAATGAAATG
TGATTTGATGATGTGATTTTTCCTCATNAACCTTCGATAATGCAATGAAA
TGTGATTTGATGATGTGATTTTTCCTCATCTTCTTTATAGGGGCTGCACT
ACTCATTCCAAACTTCAGATAAATTGTATTTCGTTTTGGATTATGTAAAT
GGTGGAGAGGTAAAATCTTACAACTCTTAACCAATTTTTTGATAAATTGA
CTTCAAAGAAGTTTTGCTACTGAGGAGCCTTAGGGAGTTTTTATCATTTA
CAGGAGGAGATAACGAAGCCTCAAGGTCAGCTGGTCAAATTAAAATCAAA
GTGCATGAAGTATAAGGAAAACTGTCTCAGCTATGTACTTTATACCAGAA
GAAGTCCCAAGAAATACAGGGGCGATAAGGCTATTAGAAATTCAAGGACT
AGTAAGCGACGTGTTGAACGTGTTGCGTTTTCTTTCAATCTGATTTACAT
TCTCATTTTTCTTATCCTTTTTTTCAGTTGTTCTTCCATCTTCAACGAGA
AAGATACTTCCCAGAACATAGGTTTGTAAATTTATTTGTTAAATAAGATA
AAAAGGGTTTGTAGGGTAATCAGTGCTCGTTTTTGAATTGGTTTTATATT
TTTTGTGTTAAGTACTTAGCACCTAGTTTTTGCTTAAAGTACCTTAAAGT
GGGTAAAATTCCTTCCTGGATTACTCATATTTTTAAGCCTACGACTTCCT
GGTTTGAAAAAGGTTGTTTTTATATCACTATTCATTGAATTTATAGGGCA
AGATTTTATGCAGCTGAAATAGGATCAGCAATTGGATATCTCCATGGACT
TAAGATTATTTACAGGTATAATTCATTATATTTTATTACAGAGTAATGAA
TCCTTTGCAAAATGAAACGAAACTGAAAGCACTATTTTTCTCCTATAAAC
ATCTGTTCAGATAATTTTGTATCTTGTAGAAATATAAATCCTTTAAATTT
AATTAACCTTCGTAATTTATTTTAGGGACCTGAAACCAGAAAATATTCTA
TTGGACTCAAAGGTAAATTATTGGCTCATTGATTGCTTTTCAATTTCAAA
TATGGCATGATGTCTTTCCCATGAAATAACAATGGAGATTTTTAAGGTCT
CCTTTGATAAATTTCTGGCTTACAAGCTTTCCTTTATTTTTCATACCAAA
TGGTTCGAATCTGATATTTTTTTTTTTTTTCATGTTTTATTTTAGGGTCA
TGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAAATAAAG
GAACAACATCAACCTTTTGCGGGACACCAGAGGTACTTAAGATCATTTGA
GGTTTTCCTTTGAGCTGAATGGAAAAAAAAACTTAAAACAATTGTTTGAG
AACTTTAATTTGAATCATTAGCTTAAAATTATTTTTCGAGAAATTTAACT
TGAATCATTTTGAGGCTTTATAAAAAATATTAGATTGAAGTTTTAGTTTT
AATCTCACATCTTTTCTCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGA
AGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACA
TATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGA
AATGTACGACAATATCCTTCACAAACCTCTACGACTACGAACCAATATTT
CACAAAGCGCAAGACACCTTTTAGAACAGGTATCATTTTCATAATTTTAT
CTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTCAAAATGATATTTTGGG
AGGAATGTTTTTAATACAATTTTCTAGGAAATATTTTTTTCTTATTTATT
TACATTATCTTTATCTTTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAA
CGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAG
TGTACTTTGTCTCAAATTAATTAGTTAATTTTTTTATTGGATAATCTAGA
ATATTTTCGAATTCGGTTTTAGCAGCTTAATAGAAAACTTTATCTGATAA
AAGCTGTTAAGGTTTACTAATAATTTTTATTTATGTTTGTTATTGTAGGA
CGAGATCCGATCACATCCATTCTTCCGTAGTATCAATTTCCATGATCTTT
ACAACAAGAAAATCGAGCCCACCTATAACCCCAATGTTGTAGGTTCACCA
TTAAATTTCTGTATCATTCATCATTCATTTATATTCATAATATTTCGCTC
GGAAATTCATTCAGTATTTGAAACGTTATGTTAACTTTCTGACTTGGTTC
CTACAACCCTATGGTTTTTCGGTGTGACTGTTTATTTGTTTACTTCAATG
GGATAAATTTACGTGGTGATTTGATTNGTTCAGATAATTTTGTATCTTGT
AGAAATATAAATCCTTTAAATTTAATTAACCTTCGTAATTTATTTTAGGG
ACCTGAAACCAGAAAATATTCTATTGGACTCAAAGGTAAATTATTGGCTC
ATTGATTGCTTTTCAATTTCAAATATGGCATGATGTCTTTCCCATGAAAT
AACAATGGAGATTTAAGGTTTCCTTTGATAAATTTCTGGCTTACAAAGCT
TTCCTTTATTTTTCATACCAAATGGTTCGAATCTGATATTCTTATTTTTT
TTCATGTTTTATTTTAGGGTCATGTTGTATTGACAGATTTTGGACTTTGC
AAAGAAGGCATTGAAAATAAAGGAACAACATCAACCTTTTGCGGGACACC
AGAGGTACTTAAGATCAATCGAGGTTTTCCTTTGAGCTGAATGGAAAAAA
AAAACTTAAAACAATTGTTTGAGAACTTTAATTTGAATCATTAGCTTAAA
ATTATTTTTAGAGAAATTTAACTTGAATCATTTTGAGGCTTTATAAAAAA
TATTAGATTGAAGTTTTAGTTTTAATCTCACATCTTTTCTCTGTTTAGTA
TTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACGACAAATCAGTAGATT
GGTGGTGTTTGGGAGCTGTCACATATGAAATGATGTATGGCTTACCACCT
TTCTACTCAAGAGACACTGCAGAAATGTACGACAATATCCTTCACAAACC
TCTACGACTACGAACCAATATTTCACAAAGCGCAAGACACCTTTTAGAAC
AGGTATCATTTTCATAATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGA
TCTTTTCAAAATGATATTTTGGGAGGAATGTTTTTAATACAATTTTCTAG
GAAATGTTTTTTTCTTATTTATTTACATTATCTTTATCTTTGGTTTTAGC
TCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTC
GTAAGTATTTGCTTTTTTGAAAGTGTACTTTGTCTCAAATTAATTAGTTA
ATTTTTTTGTTGGATAATCTAGAATATTTTCGAATTCGGTTTTAGCAGCT
TAATAGAAAACTTTATCTGATAAAAGCTGTTAAGGTTTACTAATAATTTT
TATTTATGTTTGTTATTGTAGGACGAGATCCGATCACATCCATTCTTCCG
TAGTATCAATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATA
ACCCTAATGTCGTAAGTTCACCATTAAATTTCTGTATCATTCATCATTCA
TTTATATTCATAATATTTCGTTCGGAAATTCATTCAGTATTTGAAACGTT
TGAAACGTTCTGTTAACTTTGTGACTTGGTTCCTACAACCCTATGGTTTT
TCGGTGTGACTGTTTATTTGTTTACTTCAATGGGATAAATTTACGTGGTG
GTTTGATTTCGCGAATCGGGGTAGAAATAGAAATTATAGAATATAAAATC
TTCCCATGAAAATGAACGAAACTTTCTTTTAAATCGAATTATTATAGTAC
AGCACCTGACCCCGAGAATGTAGGTGAAATTTGAATCAGACCTGAAAGAT
GTAGATTTGCATTTTAAAAGATATTAAATATTTTCAACGAAATTTTGAAC
TCCCAAAATCCTTATTATTGTTCTCTAAGCTAAATTCATACTTTAGAAAT
ATACGCTGACAAAAAATTAACAAATATATTAATTTCATCGTACTACAAAT
GAGGAAAAGTAAAAGAAGGACGAAAAGAAGGGACAAGAAAGTTGTTTTTA
TTTTGTAGGTTGAAAATTTTGTGTTGAAATATGTGAATAATGTAACAACA
CCCCTGCCTCACAGCCCCGGTGGAACTTTTTCCCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAGGCCCCCAAATTGTA
GGTCAACTAACCCCAAAAGTTAGGTCAAACATTTTCGTCAAAATATCTAA
CTCAGAACAGTAAATATTGAAATGGACTATTTTCACCATTTCCTTAGTTC
ATTAGGACTAAGAAAATACCCTATCATCATAACTTAATTCCAATGATTTC
GATTTAGAGAGGATTTATTTAAAAAATGTCTCAGTTCGGGTAATATCCAA
TCAACTTCCATTCAGATTTTCGTTGGAAAAAATTAATTCAAGTTAAAATT
TTCTGTCCAGAAATAATCAATAAGATGTAACAGTATGCTCTGAAACAAAT
TTTTATGAAGTTGAACTATCGTTAGGGCTACAATGCTAAAAAATGAGAAA
CCTACATTCTCGGGGTTTACTACATTCTCGGGGTCAGGTGCTGTAACCTT
TTTTGGAATATAGCGAGTGTGGCGTGTCCTCGCGGAGAAAACGATGAAGG
TCATCATCATCATCATTGCTCGACCGCAGTCGAGACTAGACGCTGAAGAT
AGAAATTTCGAGAAATCCCTGGAATTTAATCCTGGTGAAAATTTATCCCA
TTAAAGTATTTTTCAGCTATTTTAAGCTTCTTTTTCCAAATTCTCATCAT
GAAACCTTTCAATGTATTTTCAGAGTGGTCAATTAGATTTGAAGCATTTC
GATCCAGAATTTGTAAGGGAGCCAGTACCTGGTAAGTTGGCGATCAAAAA
ACGTTCTAAAATACTATTTGCTTTGGCGATCTCTTTTTATTCGGAAGCCA
GTTTTGAATTCGTCATAAAAAAATTAAATTAGAATCGTCTGGTATGTCAA
AGAGAGAACGATTATTGGTATTCATTGCAGTAATTAAATGGAAACCGCAT
TTTTTATTTGTTTGTTTACGTTGCGAGTGATGAGGTAACATCCGCTACGC
GCAATGCGGCTTTCTCCTCTCTCATTCGGTCAGAAAATAATGAGAAGTTA
CGTTTTCAAAATTTTCTATGCGCTTCTATTAGAAAGTATATAAACAGCCC
GTTTTTTTAACACGATAACATGCTTTATTATCTTTCTTCTCTAAAAAATA
CTTCGACCTAACGATACCCTAACAAATTTGATACTTCGATCATTGAAACC
GCAAATCAGAACTTTAAAGAGTCGAGGTTCTCCTGTTTTTTTTTGTATTA
TCCAAATTACAAAAATTCTTCAATTTTCCCTCTCGTAGCATCTGTGACAA
AGGCCGATGGAAGTCAAGTCATTTCTGCAAGTGTGGATGACCCTGATGAA
GCATTTGTTGGATTCACTTACGTACCCCAATCCGAAGATTTAGTCGAATA
AATGCATTCACCTGTGGCTCAATGCTGGCCACAGTATGGCGAATCATTTC
TAGAAAATATAGTTGTTTACTTTCTCTTCGCAATATTCATGTCTGGTTGA
TTTATAACGTCGATGGACATACCGTGAAGCATTTATGGAGAACTGAACCA
AGGTCCATTTTTTCTGTAATATTACAAATTTGTTAATAAAGAATGAGAGA
GTGGTAAGGCAAAAATTTTATTTTACTTTTTTTTGTACTTTTTGTTTTGA
TTTAGATAACTTATGAACAATTCAGAATTATAAAAAACAACCTCTAGCAA
CTTTTTAATAATAGAGAACAAATTTAAAACAGGTTGGGAAAATTATTAAC
TGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039265-exon-sc0002054-1575043694:22769..22863TCONS_00039265-exon-sc0002054-1575043694:22769..22863Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:22474..22557TCONS_00039265-exon-sc0002054-1575043694:22474..22557Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:22003..22081TCONS_00039265-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:19289..19364TCONS_00039265-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:18311..18398TCONS_00039265-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:17722..17768TCONS_00039265-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:17424..17481TCONS_00039265-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:17106..17189TCONS_00039265-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:16923..16985TCONS_00039265-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:16655..16723TCONS_00039265-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:16293..16336TCONS_00039265-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:15999..16067TCONS_00039265-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:15802..15838TCONS_00039265-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:15532..15618TCONS_00039265-exon-sc0002054-1575043694:15532..15618Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:15135..15338TCONS_00039265-exon-sc0002054-1575043694:15135..15338Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:14937..14987TCONS_00039265-exon-sc0002054-1575043694:14937..14987Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:14676..14765TCONS_00039265-exon-sc0002054-1575043694:14676..14765Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:10983..11040TCONS_00039265-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1575043694:10011..10475TCONS_00039265-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:22769..22863TCONS_00039265-exon-sc0002054-1510915933:22769..22863Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:22474..22557TCONS_00039265-exon-sc0002054-1510915933:22474..22557Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:22003..22081TCONS_00039265-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:19289..19364TCONS_00039265-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:18311..18398TCONS_00039265-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:17722..17768TCONS_00039265-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:17424..17481TCONS_00039265-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:17106..17189TCONS_00039265-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:16923..16985TCONS_00039265-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:16655..16723TCONS_00039265-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:16293..16336TCONS_00039265-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:15999..16067TCONS_00039265-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:15802..15838TCONS_00039265-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:15532..15618TCONS_00039265-exon-sc0002054-1510915933:15532..15618Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:15135..15338TCONS_00039265-exon-sc0002054-1510915933:15135..15338Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:14937..14987TCONS_00039265-exon-sc0002054-1510915933:14937..14987Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:14676..14765TCONS_00039265-exon-sc0002054-1510915933:14676..14765Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:10983..11040TCONS_00039265-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1510915933:10011..10475TCONS_00039265-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:22769..22863TCONS_00039265-exon-sc0002054-1491911889:22769..22863Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:22474..22557TCONS_00039265-exon-sc0002054-1491911889:22474..22557Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:22003..22081TCONS_00039265-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:19289..19364TCONS_00039265-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:18311..18398TCONS_00039265-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:17722..17768TCONS_00039265-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:17424..17481TCONS_00039265-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:17106..17189TCONS_00039265-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:16923..16985TCONS_00039265-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:16655..16723TCONS_00039265-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:16293..16336TCONS_00039265-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:15999..16067TCONS_00039265-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:15802..15838TCONS_00039265-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:15532..15618TCONS_00039265-exon-sc0002054-1491911889:15532..15618Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:15135..15338TCONS_00039265-exon-sc0002054-1491911889:15135..15338Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:14937..14987TCONS_00039265-exon-sc0002054-1491911889:14937..14987Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:14676..14765TCONS_00039265-exon-sc0002054-1491911889:14676..14765Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:10983..11040TCONS_00039265-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039265-exon-sc0002054-1491911889:10011..10475TCONS_00039265-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..22863 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.84523e-05	3.69559e-05	0.000447155	0.0012685	4.78049	11.7257	32.3356	27.559	0.000590348	0.000524657	0.000253499	3.9162e-06	0	9.8945e-10	2.3374e-10	1.84414e-10	1.16301e-07	7.90612e-10	0.000338327	0	1.36354e-06	1.44322e-05	8.86595e-06	7.27484e-08	1.41286	1.83535	0.00038686	6.58844e-07	0.000141011	0.000173154
Blast
[Close]
BLAST of TCONS_00039265 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 3 
Query:   39 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1487
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039265 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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