TCONS_00039261 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039261
Unique NameTCONS_00039261
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1832

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039261 ID=TCONS_00039261|Name=TCONS_00039261|organism=Clytia hemisphaerica|type=transcript|length=1832bp
TAGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTAGTT
CTgatgcaaaaaattcaaagaagtACACTGTTTACAAGGTAGCTGTTGAG
GCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATATAATGAGTTCCATAC
ACTGTATGATAAGGTCAAAAAGGTTTATCCTGAACAGCTTCACAACTTTA
AGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGATTTCATT
AAAATGCGAAGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATT
ACCAAATATATTCAACCATGCTGACGTCAGAGAATTCTTCCAATTGGATA
ACCCCCGAAATTCTTCAATAAATATTGATGAAGAAGAAGATGAAGTTGCA
GAAGTTGCATCAGAGTTGGAAAATGTTGACCTTGGGCAATCTGAATCAAA
GAAAGCGAAACCAAGTGATTTTGCATTCTTAAAAGTGATTGGTAAAGGAA
GTTTTGGAAAGGTTTTGCTGGCAAAACacaaaactgaagaaaaattttat
GCAATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGCGCG
ACATATCATGGCTGAAAGAAATgttcttttgaagaatgtgAAGCATCCTT
TCCTTGTTGGGCTGCACTACTCATTCCAAACTTCAGATAAATTGTATTTC
GTTTTGGATTATGTAAATGGTGGAGAGTTGTTCTTCCATCTTCAACGAGA
AAGATACTTCCCAGAACATAGGGCAAGATTTTATGCAGCTGAAATAGGAT
CAGCAATTGGATATCTCCATGGACTTAAGATTATTTACAGGGACCTGAAA
CCAGAAAATATTCTATTGGACTCAAAGGGTCATGTTGTATTGACAGATTT
TGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACCTTTT
GCGGGACACCAGAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTAC
GACAAATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGAT
GTATGGCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACA
ATATCCTTCACAAACCTCTACGACTACGaaccaatatttcacaaagcgCA
AGACACCTTTTAGAACAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGG
AAGCTCAGAAGCTGATTTCGACGAGATCCGATCACATCCATTCTTCCGTA
GTATCAATTTCCATGATCTTTACAACAAGAAAATCGAGCCCACCTATAAC
CCTAATGTCAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATTTGT
AAGGGAGCCAGTACCTGCATCTGTGACAAAGGCCGATGGAAGTCAAGTCA
TTTCTGCAAGTGTGGATGACCCTGATGAAGCATTTGTTGGATTCACTTAC
GTACCCCAATCCGAAGATTTAGTCGAATAAATGCATTCACCTGTGGCTCA
ATGCTGGCCACAGTATGGCGAATCATTTCTAGAAAATATAGTTGTTTACT
TTCTCTTCGCAATATTCATGTCTGGTTGATTTATAACGTCGATGGACATA
CCGTGAAGCATTTATGGAGAACTGAACCAAGGTCCATTTTTTCTGTAATA
TTACAAATTTGTTAATAAAGAATGAGAGAGTGGTAaggcaaaaattttat
tttacttttttttgtactttttgttttgatttagatAACTTATGAACAAT
TCagaattataaaaaacaacCTCTAGCAACTTTTTAATAATAgagaacaa
atttaaaacagGTTGGGAAAATTATTAACTGC
Run BLAST on NCBI

transcript from alignment at sc0002054:10011..22847-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039261 ID=TCONS_00039261|Name=TCONS_00039261|organism=Clytia hemisphaerica|type=transcript|length=12837bp|location=Sequence derived from alignment at sc0002054:10011..22847- (Clytia hemisphaerica)
TAGTAACAAAGATCTAGGGATTAGTGTTCCTGACTCACAGACACTTAGTT
CTGATGCAAAAAATTCAAAGAAGTACACTGTAAGTATAAGTATTCTAAAT
AATTTTCATTCAAGTTTTGCATTTTTAACACCTTTTGTCGATTTGTCAAA
TTATTTGCATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGGT
TTACAAGGTAGCTGTTGAGNCACCTTTTGTCGATTTGTCAAATTATTTGC
ATTTGAAAATTATTTATATTGAATTGTTTTATGTTTTAAGGTTTACAAGG
TAGCTGTTGAGGCAAATGGCCGAAAATGGTTTGTTCTTCGAAGATATAAT
GAGTTCCATACACTGTATGATAAGGTTAGAAATTTATGGCTTGGAAACGT
TTTGTGCTACAATTGATAATTTTTTGTATTTGCACTGTTTCTGTTTACCT
TATTCTGTGCTGCTGTGTAATCAAAAATTTTCTTCTAGAAATTTCTTGAA
AATATTTGTATTAAAAACTCATTCTGAAAAAGAAAAAGATTAAAGTGGCA
TTTTGTCATCTATCATAAGTGTAACTTAATTACAACTAATGTTTCCTTGA
TAGGAAAACCAAAACCTTTTAATTGTGACTCTGTAACTATTCTTGTAGCA
AAAAAATGCTCAAACAATATGTATGCAAATCCTGTGTTAATGCATCTTTT
GCTTTTTTAGCTGACAACTTTTTGACATGTTTATTTACATATGAATCATT
CATTTTTTCAATATAGGTCAAAAAGGTTTATCCTGAACAGCTTCACAACT
TTAAGTTGCCAGGCAAGAAATTGTTTGGGAACAATTTTGACCCAGGTAAA
AATTTTATACGCCCTCTATCAAATTATCCCTCAAAATTTTAAATTCAAAA
ACTGAAATGAAAATTTAAAAGATTAAAGAGGTATTTCATTTCACTGGAGT
TTGTTTACGTGAATAAAAAACAAAGAGATTGATTTTATCAACTTTGTTTA
GATAAGCTTAATTTGATTTGCTCTGTTTTGATGATAAATCTTATAAACAC
CTTTGTGTTATAATCTTTGTAGAACTTTGCAGAAGAATTTACATCATTTT
TTGTTGCATTTTCTCATGTTCTTGTAATAAAGATATTTTTGTTGTTTTCA
ATAAAAGAAACTAAAAGTTGCCATCTGGTGTATCAAAAAGTAATAAATAA
TGAAAGACTTTCATAAAAAGAGAAACAAGTTTGATATATAAAAGTGAAAT
GTACTTGCTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAACTATATTTGAAAAGC
AATATCAGCCTGCCTCTTCATATTTACATCAAAAAAATATCATACAAGTA
AAAGATGTATCCTTATTTCTGTTCCCATACTTTGATTTGAAATTAAATCG
TCTCCTACCTCTATTACTCTGCCATCACCATTGGCGTCCTTGTCTCCTTG
TGTTCTCGTCATACAAGTCAATTCATCTAAGTGAATGAAAATAAGCACAT
ATCTATCCTTCCTTGCTGTGAAGAAAGTGCTTGACAAATAATTCAGTCAT
GGTTCTAATGCTTTTATCACTCCGTTCTTACAGATTTCATTAAAATGCGA
AGAGAGGGTCTTGATGATTTTGTAAGGAAAATATTAGGATTACCAAATAT
ATTCAACCAGTAAGTAATGATGAGAGTTGCTTGATTTTTCATGTTTTTCT
ACAACTCCTTATAAAATAAGATTAATACTATCAAAATTATTTTTTTGTCA
AACTAATTTAAATGTGAGATGGTTTTCTTATGTTAATGCTCTCTTCCCAT
AGCGTCAGCCCCCCCTGGAAACTGGGGAAGGAAATCACTCTAAAATATTC
CCGAAAAACTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCATGAAG
CTGAAAAATTTTGTCTGCGGGGNAAATCACTCTAAAATATTCCCGAAAAA
CTTAATGGTTGGCTTCAATTACTTAATTTAAAGTTCATGAAGCTGAAAAA
TTTTGTCTGCGGGGGAATATTTTAATATGAAATATTCAAAATATGTAAAA
TATACTATCTTCTATCTTTTAATATTTTACTTGGCTCTGCAACATCGATC
ACAGACACAGACAAAACTATCTTCTACTTTTTTTTCCTGGGANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNATATGAAATATACTATCTTCTATC
TTTTAATATTTTACTTGGCTCTGCAACATCGATCACAGACACAGACAAAA
CTATCTTCTACTTTTTTTTCCTGGGACAAATTTTAGAAAGTGTAGATGGT
GGCAAATCTTGAGAGCTATAAACAAATTTTTAAATTATTGGGGGACTTAA
CTTTTTGTCTGGGACCTAAACACTGGCTGAGGATATGGCTCTTCCACGTT
ATAGGTGAAAAATACCAAAAATTAAAGAATTTGTTAGAAAGTTGTTCTCA
ATCAGGTTTCAATCAAAATAAGAGTTCTATCTTTCAAAAGGTTAACCTTC
CAGTGCATTCTTAAAAAAAACAGTTTAATGACCTGCTTCATTTTCATAGT
GCTGACGTCAGAGAATTCTTCCAATTGGATAACCCCCGAAATTCTTCAAT
AAATATTGATGAAGAAGAAGATGAAGTTGCAGAAGTTGTAAGAATCCATT
TTTGTTCGCATTGTATGATGTCGGTTATGCCAAATTATACAAACCACCAA
AGAAATTCTGAAATTCTGAAAAAAGAGCCATTTAAAAAAAGTTGGAAATG
GCAGCAGTGTACAAGATACAAACTTTCCCTTTTTTGATAAAATCTAGTTT
CACCAGCCATTAATATTTTGTATTACTTTATACCCTCAAGAAAGCTTTTT
TATAAAACTAAAAGCTAAAAGCTTTTTAAATTTGTTTTGGGAAATAGGCT
CTCAAGAACTAAAGCATAATTTGAAAAAATATATAAAATCCCAGCATGTT
GTACTTTCTTTCTATTGATAAACCTGTGTTGTCTTGATCTGAAAATCTAT
TCAAAATAAAACTTTTCTTTTTCAAAATGTTAGAGACTTTACTAATGAAA
ACTTTTTCTTCAAATATGGCTTATTTTCAGGTACTTATAATAAATTTTTT
TAATTTTCTTAAATCTAAAATCAAACACTGTATTTGTGTGGTCTGAGACT
CGTTTTTGATACCTTCTTATCTTTCTAAGGCATCAGAGTTGGAAAATGTT
GACCTTGGGCAATCTGAATCAAAGAAGTAAGTTTATTAAAGTCCATTTAA
AGGAAATTATTCCAAAAACGAACTTTCATATTTGCCTCTCTTGAGTTTGC
ATGGATTTATCTTTCAGAAACTAATTTCGTTTTCAGTGAGCCTACCTTTG
CTTTTATCCAATTTTAAGGTGTTTGTAATTGAGTTTTTCAATTGATTTGT
GAAATATCTGTCATCTTACTCGTTAATTTCACTGATAATGATGAAATATT
CATCTTACAACTTCAGAGCGAAACCAAGTGATTTTGCATTCTTAAAAGTG
ATTGGTAAAGGAAGTTTTGGAAAGGTAATAACTCTGAACAGTAACATTTT
TTCTTTGGAAAATATAAGATATCCTTGGGTTTTGATTTACCAAAATGTCT
AAATTTATGTCCCCTTTGATTTAGTTTTCAATCATTCCCCTCGCTTTGAT
TTAGTGTTGTTGGAAATGATGAGTGTTTAATTGATAAAAGTACAATGATC
AATGTTTGGAAGAAATCTAAACCATAAAGTTTCAGCAAGTTTAACTTTTT
TGATTTAGGTTTTGCTGGCAAAACACAAAACTGAAGAAAAATTTTATGCA
ATCAAAGTCCTGCACAAAGCAGCTATTCGTAAAAGAAATGAGGTATGATA
CTTACCTCATTGTTTTTTCAGTTTTTTTTTAAATTGGAACAAGATCATTG
CATTTGCAAAGACATAATGTAAAATAAAGTAATATTTTGAATTCGATGGA
TACTTTTTACAGGCGCGACATATCATGGCTGAAAGAAATGTTCTTTTGAA
GAATGTGAAGCATCCTTTCCTTGTTGTAAGTATTTCATGCAAAATTAACG
ATTGAGGATTCATTTTCATCTCCAATTCAATACCGATGCATAGAATATTT
TATTCAAGAAAACCTTCGATAATGCAATGAAATGTGATTTGATGATGTGA
TTTTTCCTCATNAACCTTCGATAATGCAATGAAATGTGATTTGATGATGT
GATTTTTCCTCATCTTCTTTATAGGGGCTGCACTACTCATTCCAAACTTC
AGATAAATTGTATTTCGTTTTGGATTATGTAAATGGTGGAGAGGTAAAAT
CTTACAACTCTTAACCAATTTTTTGATAAATTGACTTCAAAGAAGTTTTG
CTACTGAGGAGCCTTAGGGAGTTTTTATCATTTACAGGAGGAGATAACGA
AGCCTCAAGGTCAGCTGGTCAAATTAAAATCAAAGTGCATGAAGTATAAG
GAAAACTGTCTCAGCTATGTACTTTATACCAGAAGAAGTCCCAAGAAATA
CAGGGGCGATAAGGCTATTAGAAATTCAAGGACTAGTAAGCGACGTGTTG
AACGTGTTGCGTTTTCTTTCAATCTGATTTACATTCTCATTTTTCTTATC
CTTTTTTTCAGTTGTTCTTCCATCTTCAACGAGAAAGATACTTCCCAGAA
CATAGGTTTGTAAATTTATTTGTTAAATAAGATAAAAAGGGTTTGTAGGG
TAATCAGTGCTCGTTTTTGAATTGGTTTTATATTTTTTGTGTTAAGTACT
TAGCACCTAGTTTTTGCTTAAAGTACCTTAAAGTGGGTAAAATTCCTTCC
TGGATTACTCATATTTTTAAGCCTACGACTTCCTGGTTTGAAAAAGGTTG
TTTTTATATCACTATTCATTGAATTTATAGGGCAAGATTTTATGCAGCTG
AAATAGGATCAGCAATTGGATATCTCCATGGACTTAAGATTATTTACAGG
TATAATTCATTATATTTTATTACAGAGTAATGAATCCTTTGCAAAATGAA
ACGAAACTGAAAGCACTATTTTTCTCCTATAAACATCTGTTCAGATAATT
TTGTATCTTGTAGAAATATAAATCCTTTAAATTTAATTAACCTTCGTAAT
TTATTTTAGGGACCTGAAACCAGAAAATATTCTATTGGACTCAAAGGTAA
ATTATTGGCTCATTGATTGCTTTTCAATTTCAAATATGGCATGATGTCTT
TCCCATGAAATAACAATGGAGATTTTTAAGGTCTCCTTTGATAAATTTCT
GGCTTACAAGCTTTCCTTTATTTTTCATACCAAATGGTTCGAATCTGATA
TTTTTTTTTTTTTTCATGTTTTATTTTAGGGTCATGTTGTATTGACAGAT
TTTGGACTTTGCAAAGAAGGCATTGAAAATAAAGGAACAACATCAACCTT
TTGCGGGACACCAGAGGTACTTAAGATCATTTGAGGTTTTCCTTTGAGCT
GAATGGAAAAAAAAACTTAAAACAATTGTTTGAGAACTTTAATTTGAATC
ATTAGCTTAAAATTATTTTTCGAGAAATTTAACTTGAATCATTTTGAGGC
TTTATAAAAAATATTAGATTGAAGTTTTAGTTTTAATCTCACATCTTTTC
TCTGTTTAGTATTTGGCCCCAGAAGTGTTGCGGAAGCAATCCTACGACAA
ATCAGTAGATTGGTGGTGTTTGGGAGCTGTCACATATGAAATGATGTATG
GCTTACCACCTTTCTACTCAAGAGACACTGCAGAAATGTACGACAATATC
CTTCACAAACCTCTACGACTACGAACCAATATTTCACAAAGCGCAAGACA
CCTTTTAGAACAGGTATCATTTTCATAATTTTATCTTTCTTTGTTTTGAC
TTTGTGTTTGATCTTTTCAAAATGATATTTTGGGAGGAATGTTTTTAATA
CAATTTTCTAGGAAATATTTTTTTCTTATTTATTTACATTATCTTTATCT
TTGGTTTTAGCTCCTCCAAAAAGAAAAGAGTAAACGTTTAGGAAGCTCAG
AAGCTGATTTCGTAAGTATTTGCTTTTTTGAAAGTGTACTTTGTCTCAAA
TTAATTAGTTAATTTTTTTATTGGATAATCTAGAATATTTTCGAATTCGG
TTTTAGCAGCTTAATAGAAAACTTTATCTGATAAAAGCTGTTAAGGTTTA
CTAATAATTTTTATTTATGTTTGTTATTGTAGGACGAGATCCGATCACAT
CCATTCTTCCGTAGTATCAATTTCCATGATCTTTACAACAAGAAAATCGA
GCCCACCTATAACCCCAATGTTGTAGGTTCACCATTAAATTTCTGTATCA
TTCATCATTCATTTATATTCATAATATTTCGCTCGGAAATTCATTCAGTA
TTTGAAACGTTATGTTAACTTTCTGACTTGGTTCCTACAACCCTATGGTT
TTTCGGTGTGACTGTTTATTTGTTTACTTCAATGGGATAAATTTACGTGG
TGATTTGATTNGTTCAGATAATTTTGTATCTTGTAGAAATATAAATCCTT
TAAATTTAATTAACCTTCGTAATTTATTTTAGGGACCTGAAACCAGAAAA
TATTCTATTGGACTCAAAGGTAAATTATTGGCTCATTGATTGCTTTTCAA
TTTCAAATATGGCATGATGTCTTTCCCATGAAATAACAATGGAGATTTAA
GGTTTCCTTTGATAAATTTCTGGCTTACAAAGCTTTCCTTTATTTTTCAT
ACCAAATGGTTCGAATCTGATATTCTTATTTTTTTTCATGTTTTATTTTA
GGGTCATGTTGTATTGACAGATTTTGGACTTTGCAAAGAAGGCATTGAAA
ATAAAGGAACAACATCAACCTTTTGCGGGACACCAGAGGTACTTAAGATC
AATCGAGGTTTTCCTTTGAGCTGAATGGAAAAAAAAAACTTAAAACAATT
GTTTGAGAACTTTAATTTGAATCATTAGCTTAAAATTATTTTTAGAGAAA
TTTAACTTGAATCATTTTGAGGCTTTATAAAAAATATTAGATTGAAGTTT
TAGTTTTAATCTCACATCTTTTCTCTGTTTAGTATTTGGCCCCAGAAGTG
TTGCGGAAGCAATCCTACGACAAATCAGTAGATTGGTGGTGTTTGGGAGC
TGTCACATATGAAATGATGTATGGCTTACCACCTTTCTACTCAAGAGACA
CTGCAGAAATGTACGACAATATCCTTCACAAACCTCTACGACTACGAACC
AATATTTCACAAAGCGCAAGACACCTTTTAGAACAGGTATCATTTTCATA
ATTTTATCTTTCTTTGTTTTGACTTTGTGTTTGATCTTTTCAAAATGATA
TTTTGGGAGGAATGTTTTTAATACAATTTTCTAGGAAATGTTTTTTTCTT
ATTTATTTACATTATCTTTATCTTTGGTTTTAGCTCCTCCAAAAAGAAAA
GAGTAAACGTTTAGGAAGCTCAGAAGCTGATTTCGTAAGTATTTGCTTTT
TTGAAAGTGTACTTTGTCTCAAATTAATTAGTTAATTTTTTTGTTGGATA
ATCTAGAATATTTTCGAATTCGGTTTTAGCAGCTTAATAGAAAACTTTAT
CTGATAAAAGCTGTTAAGGTTTACTAATAATTTTTATTTATGTTTGTTAT
TGTAGGACGAGATCCGATCACATCCATTCTTCCGTAGTATCAATTTCCAT
GATCTTTACAACAAGAAAATCGAGCCCACCTATAACCCTAATGTCGTAAG
TTCACCATTAAATTTCTGTATCATTCATCATTCATTTATATTCATAATAT
TTCGTTCGGAAATTCATTCAGTATTTGAAACGTTTGAAACGTTCTGTTAA
CTTTGTGACTTGGTTCCTACAACCCTATGGTTTTTCGGTGTGACTGTTTA
TTTGTTTACTTCAATGGGATAAATTTACGTGGTGGTTTGATTTCGCGAAT
CGGGGTAGAAATAGAAATTATAGAATATAAAATCTTCCCATGAAAATGAA
CGAAACTTTCTTTTAAATCGAATTATTATAGTACAGCACCTGACCCCGAG
AATGTAGGTGAAATTTGAATCAGACCTGAAAGATGTAGATTTGCATTTTA
AAAGATATTAAATATTTTCAACGAAATTTTGAACTCCCAAAATCCTTATT
ATTGTTCTCTAAGCTAAATTCATACTTTAGAAATATACGCTGACAAAAAA
TTAACAAATATATTAATTTCATCGTACTACAAATGAGGAAAAGTAAAAGA
AGGACGAAAAGAAGGGACAAGAAAGTTGTTTTTATTTTGTAGGTTGAAAA
TTTTGTGTTGAAATATGTGAATAATGTAACAACACCCCTGCCTCACAGCC
CCGGTGGAACTTTTTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAAGGCCCCCAAATTGTAGGTCAACTAACCCCAA
AAGTTAGGTCAAACATTTTCGTCAAAATATCTAACTCAGAACAGTAAATA
TTGAAATGGACTATTTTCACCATTTCCTTAGTTCATTAGGACTAAGAAAA
TACCCTATCATCATAACTTAATTCCAATGATTTCGATTTAGAGAGGATTT
ATTTAAAAAATGTCTCAGTTCGGGTAATATCCAATCAACTTCCATTCAGA
TTTTCGTTGGAAAAAATTAATTCAAGTTAAAATTTTCTGTCCAGAAATAA
TCAATAAGATGTAACAGTATGCTCTGAAACAAATTTTTATGAAGTTGAAC
TATCGTTAGGGCTACAATGCTAAAAAATGAGAAACCTACATTCTCGGGGT
TTACTACATTCTCGGGGTCAGGTGCTGTAACCTTTTTTGGAATATAGCGA
GTGTGGCGTGTCCTCGCGGAGAAAACGATGAAGGTCATCATCATCATCAT
TGCTCGACCGCAGTCGAGACTAGACGCTGAAGATAGAAATTTCGAGAAAT
CCCTGGAATTTAATCCTGGTGAAAATTTATCCCATTAAAGTATTTTTCAG
CTATTTTAAGCTTCTTTTTCCAAATTCTCATCATGAAACCTTTCAATGTA
TTTTCAGAGTGGTCAATTAGATTTGAAGCATTTCGATCCAGAATTTGTAA
GGGAGCCAGTACCTGGTAAGTTGGCGATCAAAAAACGTTCTAAAATACTA
TTTGCTTTGGCGATCTCTTTTTATTCGGAAGCCAGTTTTGAATTCGTCAT
AAAAAAATTAAATTAGAATCGTCTGGTATGTCAAAGAGAGAACGATTATT
GGTATTCATTGCAGTAATTAAATGGAAACCGCATTTTTTATTTGTTTGTT
TACGTTGCGAGTGATGAGGTAACATCCGCTACGCGCAATGCGGCTTTCTC
CTCTCTCATTCGGTCAGAAAATAATGAGAAGTTACGTTTTCAAAATTTTC
TATGCGCTTCTATTAGAAAGTATATAAACAGCCCGTTTTTTTAACACGAT
AACATGCTTTATTATCTTTCTTCTCTAAAAAATACTTCGACCTAACGATA
CCCTAACAAATTTGATACTTCGATCATTGAAACCGCAAATCAGAACTTTA
AAGAGTCGAGGTTCTCCTGTTTTTTTTTGTATTATCCAAATTACAAAAAT
TCTTCAATTTTCCCTCTCGTAGCATCTGTGACAAAGGCCGATGGAAGTCA
AGTCATTTCTGCAAGTGTGGATGACCCTGATGAAGCATTTGTTGGATTCA
CTTACGTACCCCAATCCGAAGATTTAGTCGAATAAATGCATTCACCTGTG
GCTCAATGCTGGCCACAGTATGGCGAATCATTTCTAGAAAATATAGTTGT
TTACTTTCTCTTCGCAATATTCATGTCTGGTTGATTTATAACGTCGATGG
ACATACCGTGAAGCATTTATGGAGAACTGAACCAAGGTCCATTTTTTCTG
TAATATTACAAATTTGTTAATAAAGAATGAGAGAGTGGTAAGGCAAAAAT
TTTATTTTACTTTTTTTTGTACTTTTTGTTTTGATTTAGATAACTTATGA
ACAATTCAGAATTATAAAAAACAACCTCTAGCAACTTTTTAATAATAGAG
AACAAATTTAAAACAGGTTGGGAAAATTATTAACTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023657XLOC_023657Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039261-exon-sc0002054-1575043694:22769..22847TCONS_00039261-exon-sc0002054-1575043694:22769..22847Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:22474..22557TCONS_00039261-exon-sc0002054-1575043694:22474..22557Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:22003..22081TCONS_00039261-exon-sc0002054-1575043694:22003..22081Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:19289..19364TCONS_00039261-exon-sc0002054-1575043694:19289..19364Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:18311..18398TCONS_00039261-exon-sc0002054-1575043694:18311..18398Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:17722..17768TCONS_00039261-exon-sc0002054-1575043694:17722..17768Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:17424..17481TCONS_00039261-exon-sc0002054-1575043694:17424..17481Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:17106..17189TCONS_00039261-exon-sc0002054-1575043694:17106..17189Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:16923..16985TCONS_00039261-exon-sc0002054-1575043694:16923..16985Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:16655..16723TCONS_00039261-exon-sc0002054-1575043694:16655..16723Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:16293..16336TCONS_00039261-exon-sc0002054-1575043694:16293..16336Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:15999..16067TCONS_00039261-exon-sc0002054-1575043694:15999..16067Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:15802..15838TCONS_00039261-exon-sc0002054-1575043694:15802..15838Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:14110..14196TCONS_00039261-exon-sc0002054-1575043694:14110..14196Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:13712..13915TCONS_00039261-exon-sc0002054-1575043694:13712..13915Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:13514..13564TCONS_00039261-exon-sc0002054-1575043694:13514..13564Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:13253..13342TCONS_00039261-exon-sc0002054-1575043694:13253..13342Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:10983..11040TCONS_00039261-exon-sc0002054-1575043694:10983..11040Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1575043694:10011..10475TCONS_00039261-exon-sc0002054-1575043694:10011..10475Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:22769..22847TCONS_00039261-exon-sc0002054-1510915933:22769..22847Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:22474..22557TCONS_00039261-exon-sc0002054-1510915933:22474..22557Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:22003..22081TCONS_00039261-exon-sc0002054-1510915933:22003..22081Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:19289..19364TCONS_00039261-exon-sc0002054-1510915933:19289..19364Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:18311..18398TCONS_00039261-exon-sc0002054-1510915933:18311..18398Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:17722..17768TCONS_00039261-exon-sc0002054-1510915933:17722..17768Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:17424..17481TCONS_00039261-exon-sc0002054-1510915933:17424..17481Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:17106..17189TCONS_00039261-exon-sc0002054-1510915933:17106..17189Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:16923..16985TCONS_00039261-exon-sc0002054-1510915933:16923..16985Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:16655..16723TCONS_00039261-exon-sc0002054-1510915933:16655..16723Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:16293..16336TCONS_00039261-exon-sc0002054-1510915933:16293..16336Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:15999..16067TCONS_00039261-exon-sc0002054-1510915933:15999..16067Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:15802..15838TCONS_00039261-exon-sc0002054-1510915933:15802..15838Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:14110..14196TCONS_00039261-exon-sc0002054-1510915933:14110..14196Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:13712..13915TCONS_00039261-exon-sc0002054-1510915933:13712..13915Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:13514..13564TCONS_00039261-exon-sc0002054-1510915933:13514..13564Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:13253..13342TCONS_00039261-exon-sc0002054-1510915933:13253..13342Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:10983..11040TCONS_00039261-exon-sc0002054-1510915933:10983..11040Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1510915933:10011..10475TCONS_00039261-exon-sc0002054-1510915933:10011..10475Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:22769..22847TCONS_00039261-exon-sc0002054-1491911889:22769..22847Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:22474..22557TCONS_00039261-exon-sc0002054-1491911889:22474..22557Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:22003..22081TCONS_00039261-exon-sc0002054-1491911889:22003..22081Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:19289..19364TCONS_00039261-exon-sc0002054-1491911889:19289..19364Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:18311..18398TCONS_00039261-exon-sc0002054-1491911889:18311..18398Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:17722..17768TCONS_00039261-exon-sc0002054-1491911889:17722..17768Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:17424..17481TCONS_00039261-exon-sc0002054-1491911889:17424..17481Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:17106..17189TCONS_00039261-exon-sc0002054-1491911889:17106..17189Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:16923..16985TCONS_00039261-exon-sc0002054-1491911889:16923..16985Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:16655..16723TCONS_00039261-exon-sc0002054-1491911889:16655..16723Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:16293..16336TCONS_00039261-exon-sc0002054-1491911889:16293..16336Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:15999..16067TCONS_00039261-exon-sc0002054-1491911889:15999..16067Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:15802..15838TCONS_00039261-exon-sc0002054-1491911889:15802..15838Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:14110..14196TCONS_00039261-exon-sc0002054-1491911889:14110..14196Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:13712..13915TCONS_00039261-exon-sc0002054-1491911889:13712..13915Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:13514..13564TCONS_00039261-exon-sc0002054-1491911889:13514..13564Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:13253..13342TCONS_00039261-exon-sc0002054-1491911889:13253..13342Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:10983..11040TCONS_00039261-exon-sc0002054-1491911889:10983..11040Clytia hemisphaericaexon
TCONS_00039261-exon-sc0002054-1491911889:10011..10475TCONS_00039261-exon-sc0002054-1491911889:10011..10475Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002054supercontigsc0002054:10011..22847 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0383432	0.00342755	0.125823	0.0837047	0	0	4.35724e-06	2.18942e-08	0.0857298	0.058361	0.112616	0.000153514	1.0523e-09	7.36887e-08	2.66281e-09	8.88211e-09	3.18336e-06	9.30907e-08	1.37243	2.72214e-10	9.57426e-05	0.0020651	0.013463	4.89412e-05	0	0	0.379407	0.000467018	0.211645	0.148992
Blast
[Close]
BLAST of TCONS_00039261 vs. Swiss-Prot (Human)
Match: SGK3 (Serine/threonine-protein kinase Sgk3 OS=Homo sapiens GN=SGK3 PE=1 SV=1)

HSP 1 Score: 597.43 bits (1539), Expect = 0.000e+0
Identity = 303/486 (62.35%), Postives = 372/486 (76.54%), Query Frame = 2 
Query:   23 SVPDSQTLSSDAKNSKK--YTVYKVAVEANGRKWFVLRRYNEFHTLYDKVKKVYPEQLHNFKLPGKKLFGNNFDPDFIKMRREGLDDFVRKILGLPNIFNHADVREFFQLDNPRNSS-INIXXXXXXXXXXXXXXXNVDLGQSESKKAKPSDFAFLKVIGKGSFGKVLLAKHKTEEKFYAIKVLHKAAIRKRNEARHIMAERNVLLKNVKHPFLVGLHYSFQTSDKLYFVLDYVNGGELFFHLQRERYFPEHRARFYAAEIGSAIGYLHGLKIIYRDLKPENILLDSKGHVVLTDFGLCKEGIENKGTTSTFCGTPEYLAPEVLRKQSYDKSVDWWCLGAVTYEMMYGLPPFYSRDTAEMYDNILHKPLRLRTNISQSARHXXXXXXXXXXSKRLGSSEADFDEIRSHPFFRSINFHDLYNKKIEPTYNPNVSGQLDLKHFDPEFVREPVPASVTKADGSQVISASVDDPDEAFVGFTYVPQSEDL 1471
            S P     SSD    KK  +TVYKV V     +WFV RRY EF  LY+ +KK +P      K+P K++FG+NFDPDFIK RR GL++F++ ++  P ++NH DVR F Q+D+P++ S  + DE+E    ++ S  +N++LG S +  AKP+DF FLKVIGKGSFGKVLLAK K + KFYA+KVL K  +  R E +HIMAERNVLLKNVKHPFLVGLHYSFQT++KLYFVLD+VNGGELFFHLQRER FPEHRARFYAAEI SA+GYLH +KI+YRDLKPENILLDS GHVVLTDFGLCKEGI    TT+TFCGTPEYLAPEV+RKQ YD +VDWWCLGAV YEM+YGLPPFY RD AEMYDNILHKPL LR  +S +A  +LE+LL+K++  RLG+ E DF EI++HPFF S+++ DL  KKI P +NPNV+G  D+++FD  F  E VP SV  +    +++ASV + D+AFVGF+Y P SEDL
Sbjct:   12 SCPSVSIPSSDEHREKKKRFTVYKVLVSVGRSEWFVFRRYAEFDKLYNTLKKQFPAM--ALKIPAKRIFGDNFDPDFIKQRRAGLNEFIQNLVRYPELYNHPDVRAFLQMDSPKHQSDPSEDEDERSSQKLHSTSQNINLGPSGNPHAKPTDFDFLKVIGKGSFGKVLLAKRKLDGKFYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRERSFPEHRARFYAAEIASALGYLHSIKIVYRDLKPENILLDSVGHVVLTDFGLCKEGIAISDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLSLRPGVSLTAWSILEELLEKDRQNRLGAKE-DFLEIQNHPFFESLSWADLVQKKIPPPFNPNVAGPDDIRNFDTAFTEETVPYSVCVSSDYSIVNASVLEADDAFVGFSYAPPSEDL 494
The following BLAST results are available for this feature:
BLAST of TCONS_00039261 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SGK30.000e+062.35Serine/threonine-protein kinase Sgk3 OS=Homo sapie... [more]
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