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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039212 ID=TCONS_00039212|Name=TCONS_00039212|organism=Clytia hemisphaerica|type=transcript|length=1354bp
ATCTGTTTCATTATTTTGGGTTGTAGAAAAATCGATATTAGTCATCTCAT
AGCAAATTacgaaaaaataggaaaaaatattttattttagatAATCTCCC
TTTGGGGAAGTGGTTGATTAATTTTGGCTTTTAGTTGTCTAGGGGggctt
tcaaaaacattttttggctttcctaaaaacaaaacattttttagatttaa
ttaAAAGGTAATTATTAAAATCTGAAAGAGAGTGGCTCATGTAAAGGCTG
ATGATAggttgtaatttttttcagtcatAGGTACATCGGAAATATAAAAA
AGGCGGTATGTGAGGCGATTTGGGAAAACAAAGCGAATTGGTTTCTTGAT
GCAGACAACAAGATAATTGAAAAACGAGAAAAACTAATATCATTCAAAGA
GATCAAGTGTCGAgatttttttcacaagtttgagCTAAAATACGATAAAT
CAGTTGAAATCGGAATCCTTGACCAATCGGAAGTATATAAGTCATTCTAC
AGCAACAACTTCGTCGTCTCAACGGCTGGAAAAGAAGGATGCACCATCAT
AGACGTAGCTCTTTCAAAAGGGGGGCCAGAGGCTATAGCGGAAAGTTTTT
ACAACTGCATGCGTAACCAGCAACAGCATGGGGGACAGTCGAATTGGGTT
CTAACGACGAGAGCAAAAATTGCCTGGTGCCTTCCATCCATCGATAGATT
CGATCGTTTGATAAAAGACGCTGTTGAGATTTATATCAATGGGGACGAAA
AGATAAAACCCCATCGTGAAAACATGTTTTTCACGTCGTCCAGACACAAT
AGCTACAAAGTATCAAAGGTTGTTGATCGCATTAATGCTGATTGTGGTCG
ATGTCCTTTCTTGGTATCCTCATAATGAGATCGGACTAATTGTTTAGACT
TGATATTGTTTCgttatgttattattttatcatagaatttttcttggaaa
tttaGTCCTCGTATCTCCCGTGTCTCCATAACCAAAGAAAAGCTTTCTCG
GTTGGTTTAACTGTGTGTGATACGAGTTTCCATTACGATAAtctcaacaa
atattttaaatcttcCAGTTACCATTTCAATTTCTTCTCGTTGCTTTTTG
TTTATTCTAGTATTAGGTTGAGTCCGTCTCTTTTTTATCAGCAAGATTAA
AGTTAAAATGATTATAAATTTACTTTTCAAGACACACTAACGTAACATCG
TTCTCTTCTTCTTGAGAATatgtttttacttttattttatttcatcttTT
ACCTGAAAGATACATAAAGATACATAGaattaataaagaaaaatgaccTT
ATTTTAGCCAAAATTAGGACTTTATTATCATAAAATGCTCTGGCTTTCGG
GGGC Run BLAST on NCBI transcript from alignment at sc0002043:28756..30109+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039212 ID=TCONS_00039212|Name=TCONS_00039212|organism=Clytia hemisphaerica|type=transcript|length=1354bp|location=Sequence derived from alignment at sc0002043:28756..30109+ (Clytia hemisphaerica)
ATCTGTTTCATTATTTTGGGTTGTAGAAAAATCGATATTAGTCATCTCAT
AGCAAATTacgaaaaaataggaaaaaatattttattttagatAATCTCCC
TTTGGGGAAGTGGTTGATTAATTTTGGCTTTTAGTTGTCTAGGGGggctt
tcaaaaacattttttggctttcctaaaaacaaaacattttttagatttaa
ttaAAAGGTAATTATTAAAATCTGAAAGAGAGTGGCTCATGTAAAGGCTG
ATGATAggttgtaatttttttcagtcatAGGTACATCGGAAATATAAAAA
AGGCGGTATGTGAGGCGATTTGGGAAAACAAAGCGAATTGGTTTCTTGAT
GCAGACAACAAGATAATTGAAAAACGAGAAAAACTAATATCATTCAAAGA
GATCAAGTGTCGAgatttttttcacaagtttgagCTAAAATACGATAAAT
CAGTTGAAATCGGAATCCTTGACCAATCGGAAGTATATAAGTCATTCTAC
AGCAACAACTTCGTCGTCTCAACGGCTGGAAAAGAAGGATGCACCATCAT
AGACGTAGCTCTTTCAAAAGGGGGGCCAGAGGCTATAGCGGAAAGTTTTT
ACAACTGCATGCGTAACCAGCAACAGCATGGGGGACAGTCGAATTGGGTT
CTAACGACGAGAGCAAAAATTGCCTGGTGCCTTCCATCCATCGATAGATT
CGATCGTTTGATAAAAGACGCTGTTGAGATTTATATCAATGGGGACGAAA
AGATAAAACCCCATCGTGAAAACATGTTTTTCACGTCGTCCAGACACAAT
AGCTACAAAGTATCAAAGGTTGTTGATCGCATTAATGCTGATTGTGGTCG
ATGTCCTTTCTTGGTATCCTCATAATGAGATCGGACTAATTGTTTAGACT
TGATATTGTTTCgttatgttattattttatcatagaatttttcttggaaa
tttaGTCCTCGTATCTCCCGTGTCTCCATAACCAAAGAAAAGCTTTCTCG
GTTGGTTTAACTGTGTGTGATACGAGTTTCCATTACGATAAtctcaacaa
atattttaaatcttcCAGTTACCATTTCAATTTCTTCTCGTTGCTTTTTG
TTTATTCTAGTATTAGGTTGAGTCCGTCTCTTTTTTATCAGCAAGATTAA
AGTTAAAATGATTATAAATTTACTTTTCAAGACACACTAACGTAACATCG
TTCTCTTCTTCTTGAGAATatgtttttacttttattttatttcatcttTT
ACCTGAAAGATACATAAAGATACATAGaattaataaagaaaaatgaccTT
ATTTTAGCCAAAATTAGGACTTTATTATCATAAAATGCTCTGGCTTTCGG
GGGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039212-exon-sc0002043-1491911889:28756..30109 | TCONS_00039212-exon-sc0002043-1491911889:28756..30109 | Clytia hemisphaerica | exon |
| TCONS_00039212-exon-sc0002043-1510915933:28756..30109 | TCONS_00039212-exon-sc0002043-1510915933:28756..30109 | Clytia hemisphaerica | exon |
| TCONS_00039212-exon-sc0002043-1575043694:28756..30109 | TCONS_00039212-exon-sc0002043-1575043694:28756..30109 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002043 | supercontig | sc0002043:28756..30109 + |
Blast
The following BLAST results are available for this feature:
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