TCONS_00039211 (transcript) - C. hemisphaerica

Overview
NameTCONS_00039211
Unique NameTCONS_00039211
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3862

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00039211 ID=TCONS_00039211|Name=TCONS_00039211|organism=Clytia hemisphaerica|type=transcript|length=3862bp
TTTAGCTTTACTATCGCAGTTGATTATTGATAGGTGTAACGGGGATTTTA
ATAAGAAAGATAAAAATGTCACAGATAAACTCATGTGTAACCTCGCTAAT
GTGTACTCTCTCGCTCATGTTTGTAGGCAATTCCTCTGAAACGTCCGCtt
caaaaaaacgaaaacacTCGCAAGAGGCGTGGAAGGCAAGGTTTAAAAGA
CCTAAAATCGGAGAGACAAACACAAACACTGATAAGAAAACTGACtctca
aaacaattcaaagaagaCAGCCATCGAGGAAAAATCATTTACGTGTAAAG
AGTGCCTTGAAGGGTTTTTTACCAAAAAGAATCCTGCAAAAGTAGGGTCA
ACTAGAATCTGTAGAAATGATTCATCAAGTATACAACGACACAAATCCAC
ATGGCATAAATTAACAGGCAAATGTACGATTGTCCCTACTAACTCAGTGG
ACATAGCTAATCTAAAGAAGAAATATGAACGAAAAAAGGACGATAGTGGT
AGTGACAATGAAGCAACTGAAAGCCCAAACCAAGCCTCCGACCAAGCCTC
TACTACTGCTACTTCAGTTCATGAAAGTTCTATAGCCAAGAAACCTACAC
AAACCACAATGTTGAGTGTTGCATCAAATAATCTTGAAAAAGACTCTTCA
ACACCAAAGGACGAAGATCTCatattaaaaaaactgaatGAGTTGACTTT
AGAACTCAGGGGTATGAAAACTCAACATGAAAGCATATGCAGTATTGCAT
TTAAAGATACAGAGAAAAGTGTCCTACTGGAGGCTTTACGAAAGTGTGAA
AACCTAGTTGACTTTCTGAAAgtttccaaaagttttgaatggTTTTGTGA
CGAAAAAACAGAAGAAGGGATTTTGAGGTGTAAAGCCTGTTTTCACATGT
ATCTTAAAAACAATCCTAGATCATCTAGTTTGAACCCAACACAAGTCCGT
ATGGTTACAAAGGGAAATGAATTCTCCACAGGAATGTCATATGACAAATT
GAAAACACGGCAGTTACTACAAGGAGGTAATGACACCTGGAGACATTTAA
AAAACCTCATGATCAATCATCTTTGCCTAATTGGAGAAGGATCAAACTTT
CACTTCGAGAAGATGAAAATACAAGACGAAATGTTTTTCGTGCAGCAATT
TCGGCCATTAAATTAGGGTCTGCTGCCACCCATTTTGAAACTTTGATATC
GTTGTTGAAGAGTTGGAAACATAGGGCATAGCAGGAAAAACTTTAATGAC
ATCTTGCATTGTATCGAACAGGCTATGAATAAGCAAATTAACGACTGGCT
AAGCACACCCCTACCATCAACTGGTCTACCACCACATTTCTGGGGAACTG
TTGATAAAGCTACACCTTCAAGAGTCACAAACCAAGCCGTCATCATAGTT
GCACGGGATCAAAATGGAAATTGTTGTCCTATCCCAGTAGCGGCGCCCGA
AATCTACAGAGAGCTTGATGCAGCAACCTATGATGAACTTGCAACCCAGA
TGGTTGATGctataaaagaaaactttccaTCCAGCTTGCTTTCAAGGTAT
CCCAGGACAATACAATGATAAATTGTATTTTCCTGGCATATGGTGATTTA
AAAGTAGCTTCTGAAAACTTCTGATATGTTAATCTTCCCCAATATTAAGA
CATTGTAACTGCCTTGTCATCACTTCTGCTAACGCAATCAGTAGTAAGAA
ATCACTATCCGAAAATTTAATTGATCTAAAATTAGAACTGATTGTGGACT
TATAGACAGTCGATCTCCTTCAGTGtattgttttttcttatttgtgTCAG
GATGTGTGGTGCAGCAGCCGACGACCCTTACCAAACTAAAAACTTTCGCT
CATCTTTGGTTGAACATGTTGGGacagattttgatgatattctTAGCTTC
CCTGTAACATGGGACCCTGGACATTTGCTCAATCTAGCAGTTACTGATGT
TAGAGACAATGATACGATTGGAGGCTCGTATATTAGCTTGTTCATCAAAC
GATCAAATCTGTTCAATCAATTGTTAAGGAATGGAAAGGGCTTCGCAACC
AGTATCATATGCCACTCAAAGGTTTACCAGTTCATCCTACAACCAATggg
ttaaaattttcaagtcttATGGTGCTTATATTCAAGCTTTCGAGCACTTA
CACCCCAATAGAAGTGACGATGAAGAATATCAATTCCAGATAAAAGGAGC
AGATTATGTATTTGATATGTTACTCCTATTGGACACTTTGAAACCATTGG
TTGATGTTATGCTACAGCTGCAATCCTTGGATAATCCTGTCTGGAAACTT
AAAAAGTTGTTCCCTGAATTGATTGATCGATTGAAAGAAGCAGGAGCAAG
AGATAAAGACGCTCTACCCAAACTCACCAAACACGAAAAAGATGTTAAAG
TTTGTGGAAAATTCGATGGAGTAACCCTATTGGCAGGATGGTTACCGAAA
AGAAATGCAGACGGGACTTTCACGTGGACATCACGAAACAAGACTGACAT
CCGTAAAGAACATTCAGCATTTGTGAAAGAACTTATCGAAGCCTTAGAGA
AACGAATAAAGCCAGAAATCGAGAAAGACCACATCGAAACACTGGCAGTT
CTTGATGCCGCTGAATTGGTAAAATTGTCATGTGGTAAACGAGAGAGGGG
CAAGATTGCATTTGAACGAGAGGAGGGGGAAATTGAAAGTTATGGTGTCA
AAGAgattgaaaaacaaatgaaaagtaTTTCGAAGGCCGATCACATTTCA
GACTCAAGCTTAAACTTTGATAGTCGAATGAGtcatAGGTACATCGGAAA
TATAAAAAAGGCGGTATGTGAGGCGATTTGGGAAAACAAAGCGAATTGGT
TTCTTGATGCAGACAACAAGATAATTGAAAAACGAGAAAAACTAATATCA
TTCAAAGAGATCAAGTGTCGAgatttttttcacaagtttgagCTAAAATA
CGATAAATCAGTTGAAATCGGAATCCTTGACCAATCGGAAGTATATAAGT
CATTCTACAGCAACAACTTCGTCGTCTCAACGGCTGGAAAAGAAGGATGC
ACCATCATAGACGTAGCTCTTTCAAAAGGGGGGCCAGAGGCTATAGCGGA
AAGTTTTTACAACTGCATGCGTAACCAGCAACAGCATGGGGGACAGTCGA
ATTGGGTTCTAACGACGAGAGCAAAAATTGCCTGGTGCCTTCCATCCATC
GATAGATTCGATCGTTTGATAAAAGACGCTGTTGAGATTTATATCAATGG
GGACGAAAAGATAAAACCCCATCGTGAAAACATGTTTTTCACGTCGTCCA
GACACAATAGCTACAAAGTATCAAAGGTTGTTGATCGCATTAATGCTGAT
TGTGGTCGATGTCCTTTCTTGGTATCCTCATAATGAGATCGGACTAATTG
TTTAGACTTGATATTGTTTCgttatgttattattttatcatagaattttt
cttggaaatttaGTCCTCGTATCTCCCGTGTCTCCATAACCAAAGAAAAG
CTTTCTCGGTTGGTTTAACTGTGTGTGATACGAGTTTCCATTACGATAAt
ctcaacaaatattttaaatcttcCAGTTACCATTTCAATTTCTTCTCGTT
GCTTTTTGTTTATTCTAGTATTAGGTTGAGTCCGTCTCTTTTTTATCAGC
AAGATTAAAGTTAAAATGATTATAAATTTACTTTTCAAGACACACTAACG
TAACATCGTTCTCTTCTTCTTGAGAATatgtttttacttttattttattt
catcttTTACCTGAAAGATACATAAAGATACATAGaattaataaagaaaa
atgaccTTATTTTAGCCAAAATTAGGACTTTATTATCATAAAATGCTCTG
GCTTTCGGGGGC
Run BLAST on NCBI

protein sequence of TCONS_00039211-protein

>TCONS_00039211-protein ID=TCONS_00039211-protein|Name=TCONS_00039211-protein|organism=Clytia hemisphaerica|type=polypeptide|length=450bp
MERASQPVSYATQRFTSSSYNQWVKIFKSYGAYIQAFEHLHPNRSDDEEY
QFQIKGADYVFDMLLLLDTLKPLVDVMLQLQSLDNPVWKLKKLFPELIDR
LKEAGARDKDALPKLTKHEKDVKVCGKFDGVTLLAGWLPKRNADGTFTWT
SRNKTDIRKEHSAFVKELIEALEKRIKPEIEKDHIETLAVLDAAELVKLS
CGKRERGKIAFEREEGEIESYGVKEIEKQMKSISKADHISDSSLNFDSRM
SHRYIGNIKKAVCEAIWENKANWFLDADNKIIEKREKLISFKEIKCRDFF
HKFELKYDKSVEIGILDQSEVYKSFYSNNFVVSTAGKEGCTIIDVALSKG
GPEAIAESFYNCMRNQQQHGGQSNWVLTTRAKIAWCLPSIDRFDRLIKDA
VEIYINGDEKIKPHRENMFFTSSRHNSYKVSKVVDRINADCGRCPFLVSS
Run BLAST on NCBI

transcript from alignment at sc0002043:25367..30109+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00039211 ID=TCONS_00039211|Name=TCONS_00039211|organism=Clytia hemisphaerica|type=transcript|length=4743bp|location=Sequence derived from alignment at sc0002043:25367..30109+ (Clytia hemisphaerica)
TTTAGCTTTACTATCGCAGTTGATTATTGATAGGTGTAACGGGGATTTTA
ATAAGAAAGATAAAAATGTCACAGATAAACTCATGTGTAACCTCGCTAAT
GTGTACTCTCTCGCTCATGTTTGTAGGCAATTCCTCTGAAACGTCCGCtt
caaaaaaacgaaaacacTCGCAAGAGGCGTGGAAGGCAAGGTTTAAAAGA
CCTAAAATCGGAGAGACAAACACAAACACTGATAAGAAAACTGACtctca
aaacaattcaaagaagaCAGCCATCGAGGAAAAATCATTTACGTGTAAAG
AGTGCCTTGAAGGGTTTTTTACCAAAAAGAATCCTGCAAAAGTAGGGTCA
ACTAGAATCTGTAGAAATGATTCATCAAGTATACAACGACACAAATCCAC
ATGGCATAAATTAACAGGCAAATGTACGATTGTCCCTACTAACTCAGTGG
ACATAGCTAATCTAAAGAAGAAATATGAACGAAAAAAGGACGATAGTGGT
AGTGACAATGAAGCAACTGAAAGCCCAAACCAAGCCTCCGACCAAGCCTC
TACTACTGCTACTTCAGTTCATGAAAGTTCTATAGCCAAGAAACCTACAC
AAACCACAATGTTGAGTGTTGCATCAAATAATCTTGAAAAAGACTCTTCA
ACACCAAAGGACGAAGATCTCatattaaaaaaactgaatGAGTTGACTTT
AGAACTCAGGGGTATGAAAACTCAACATGAAAGCATATGCAGTATTGCAT
TTAAAGATACAGAGAAAAGTGTCCTACTGGAGGCTTTACGAAAGTGTGAA
AACCTAGTTGACTTTCTGAAAgtttccaaaagttttgaatggTTTTGTGA
CGAAAAAACAGAAGAAGGGATTTTGAGGTGTAAAGCCTGTTTTCACATGT
ATCTTAAAAACAATCCTAGATCATCTAGTTTGAACCCAACACAAGTCCGT
ATGGTTACAAAGGGAAATGAATTCTCCACAGGAATGTCATATGACAAATT
GAAAACACGGCAGTTACTACAAGGAGGTAATGACACCTGGAGACATTTAA
AAAACCTCATGATCAATCATCTTTGCCTAATTGGAGAAGGATCAAACTTT
CACTTCGAGAAGATGAAAATACAAGACGAAATGTTTTTCGTGCAGCAATT
TCGGCCATTAAATTAGGGTCTGCTGCCACCCATTTTGAAACTTTGATATC
GTTGTTGAAGAGTTGGAAACATAGGGCATAGCAGGAAAAACTTTAATGAC
ATCTTGCATTGTATCGAACAGGCTATGAATAAGCAAATTAACGACTGGCT
AAGCACACCCCTACCATCAACTGGTCTACCACCACATTTCTGGGGAACTG
TTGATAAAGCTACACCTTCAAGAGTCACAAACCAAGCCGTCATCATAGTT
GCACGGGATCAAAATGGAAATTGTTGTCCTATCCCAGTAGCGGCGCCCGA
AATCTACAGAGAGCTTGATGCAGCAACCTATGATGAACTTGCAACCCAGA
TGGTTGATGctataaaagaaaactttccaTCCAGCTTGCTTTCAAGGTAT
CCCAGGACAATACAATGATAAATTGTATTTTCCTGGCATATGGTGATTTA
AAAGTAGCTTCTGAAAACTTCTGATATGTTAATCTTCCCCAATATTAAGA
CATTGTAACTGCCTTGTCATCACTTCTGCTAACGCAATCAGTAGTAAGAA
ATCACTATCCGAAAATTTAATTGATCTAAAATTAGAACTGATTGTGGACT
TATAGACAGTCGATCTCCTTCAGTGtattgttttttcttatttgtgTCAG
GATGTGTGGTGCAGCAGCCGACGACCCTTACCAAACTAAAAACTTTCGCT
CATCTTTGGTTGAACATGTTGGGacagattttgatgatattctTAGCTTC
CCTGTAACATGGGACCCTGGACATTTGCTCAATCTAGCAGTTACTGATGT
TAGAGACAATGATACGATTGGAGGCTCGTATATTAGGTTAACTTACTTTT
CGATTATTTTTTGATTACTTAACAAATTCcaaacaaaatgcttttctCAA
AAGTAGAAATGGACAAGTTATTTCACAACTCTATTTATCTCTAAAGAACA
AATTCATTTTTATGTTTGTAACAATTGTTTCAGgactttaattttcattt
tgttaatGTCAtgattttatgatatatttATCTTGTAGCTTGTTCATCAA
ACGATCAAATCTGTTCAATCAATTGTTAAGGAATGGAAAGGGCTTCGCAA
CCAGTATCATATGCCACTCAAAGGTTTACCAGTTCATCCTACAACCAATg
ggttaaaattttcaagtcttATGGTGCTTATATTCAAGCTTTCGAGCACT
TACACCCCAATAGAAGTGACGATGAAGAATATCAATTCCAGATAAAAGGA
GCAGATTATGTATTTGATATGTTACTCCTATTGGACACTTTGAAACCATT
GGTTGATGTTATGCTACAGCTGCAATCCTTGGATAATCCTGTCTGGAAAC
TTAAAAAGTTGTTCCCTGAATTGATTGATCGATTGAAAGAAGCAGGTATG
GTTTCATTTCTATTAAAATTATCTGTCTTATCATTCATGAATTGTATCTG
TCGTCAATTCCGTATAATCGTCTGCAATTTCGAAGTTGTAAACATATTAA
AATAATGGATTTCTCTTTTCAAAAGGAGCAAGAGATAAAGACGCTCTACC
CAAACTCACCAAACACGAAAAAGATGTTAAAGTTTGTGGAAAATTCGATG
GAGTAACCCTATTGGCAGGATGGTTACCGAAAAGAAATGCAGACGGGACT
TTCACGTGGACATCACGAAACAAGACTGACATCCGTAAAGAACATTCAGC
GTATGTATTTTACTTGTTCTATTATTGATTTACGTTTAATGATTGGTGTA
AGTGTTTCCAAGTCTTCAGTGGTTATAACCTATTTTTACATAAAACATGC
CATTTGCCAACCTTTATTCTATGCTGCAAGAAAATTCCAAAAAGGTTCAA
ATTCTCTGCCTAATGCCAGTATGTAAATAAATGTTTTACGAATTTTGAAG
CATATGCATTTCTCTATTCTATTCTTTAGATTTGTGAAAGAACTTATCGA
AGCCTTAGAGAAACGAATAAAGCCAGAAATCGAGAAAGACCACATCGAAA
CACTGGCAGTTCTTGATGCCGCTGAATTGGTAAAATTGTCATGTGGTAAA
CGAGAGAGGGGCAAGATTGCATTTGAACGAGAGGAGGGGGAAATTGAAAG
TTATGGTGTCAAAGAgattgaaaaacaaatgaaaagtaTTTCGAAGGCCG
ATCACATTTCAGACTCAAGCTTAAACTTTGATAGTCGAATGAGGTAAAAG
GATTCACTTAAATTTCATCCTTTTCTAAAATCTGTTACAATCTGTTTCAT
TATTTTGGGTTGTAGAAAAATCGATATTAGTCATCTCATAGCAAATTacg
aaaaaataggaaaaaatattttattttagatAATCTCCCTTTGGGGAAGT
GGTTGATTAATTTTGGCTTTTAGTTGTCTAGGGGggctttcaaaaacatt
ttttggctttcctaaaaacaaaacattttttagatttaattaAAAGGTAA
TTATTAAAATCTGAAAGAGAGTGGCTCATGTAAAGGCTGATGATAggttg
taatttttttcagtcatAGGTACATCGGAAATATAAAAAAGGCGGTATGT
GAGGCGATTTGGGAAAACAAAGCGAATTGGTTTCTTGATGCAGACAACAA
GATAATTGAAAAACGAGAAAAACTAATATCATTCAAAGAGATCAAGTGTC
GAgatttttttcacaagtttgagCTAAAATACGATAAATCAGTTGAAATC
GGAATCCTTGACCAATCGGAAGTATATAAGTCATTCTACAGCAACAACTT
CGTCGTCTCAACGGCTGGAAAAGAAGGATGCACCATCATAGACGTAGCTC
TTTCAAAAGGGGGGCCAGAGGCTATAGCGGAAAGTTTTTACAACTGCATG
CGTAACCAGCAACAGCATGGGGGACAGTCGAATTGGGTTCTAACGACGAG
AGCAAAAATTGCCTGGTGCCTTCCATCCATCGATAGATTCGATCGTTTGA
TAAAAGACGCTGTTGAGATTTATATCAATGGGGACGAAAAGATAAAACCC
CATCGTGAAAACATGTTTTTCACGTCGTCCAGACACAATAGCTACAAAGT
ATCAAAGGTTGTTGATCGCATTAATGCTGATTGTGGTCGATGTCCTTTCT
TGGTATCCTCATAATGAGATCGGACTAATTGTTTAGACTTGATATTGTTT
CgttatgttattattttatcatagaatttttcttggaaatttaGTCCTCG
TATCTCCCGTGTCTCCATAACCAAAGAAAAGCTTTCTCGGTTGGTTTAAC
TGTGTGTGATACGAGTTTCCATTACGATAAtctcaacaaatattttaaat
cttcCAGTTACCATTTCAATTTCTTCTCGTTGCTTTTTGTTTATTCTAGT
ATTAGGTTGAGTCCGTCTCTTTTTTATCAGCAAGATTAAAGTTAAAATGA
TTATAAATTTACTTTTCAAGACACACTAACGTAACATCGTTCTCTTCTTC
TTGAGAATatgtttttacttttattttatttcatcttTTACCTGAAAGAT
ACATAAAGATACATAGaattaataaagaaaaatgaccTTATTTTAGCCAA
AATTAGGACTTTATTATCATAAAATGCTCTGGCTTTCGGGGGC

Coding sequence (CDS) from alignment at sc0002043:25367..30109+

>TCONS_00039211 ID=TCONS_00039211|Name=TCONS_00039211|organism=Clytia hemisphaerica|type=CDS|length=5412bp|location=Sequence derived from alignment at sc0002043:25367..30109+ (Clytia hemisphaerica)
ATGGAAAGGGCTTCGCAACCAGTATCATATGCCACTCAAAGGTTTACCAG
TTCATCCTACAACCAATgggttaaaattttcaagtcttATGGTGCTTATA
TTCAAGCTTTCGAGCACTTACACCCCAATAGAAGTGACGATGAAGAATAT
CAATTCCAGATAAAAGGAGCAGATTATGTATTTGATATGTTACTCCTATT
GGACACTTTGAAACCATTGGTTGATGTTATGCTACAGCTGCAATCCTTGG
ATAATCCTGTCTGGAAACTTAAAAAGTTGTTCCCTGAATTGATTGATCGA
TTGAAAGAAGCAGGAGCAAGAGATAAAGACGCTCTACCCAAACTCACCAA
ACACGAAAAAGATGTTAAAGTTTGTGGAAAATTCGATGGAGTAACCCTAT
TGGCAGGATGGTTACCGAAAAGAAATGCAGACGGGACTTTCACGTGGACA
TCACGAAACAAGACTGACATCCGTAAAGAACATTCAGCATTTGTGAAAGA
ACTTATCGAAGCCTTAGAGAAACGAATAAAGCCAGAAATCGAGAAAGACC
ACATCGAAACACTGGCAGTTCTTGATGCCGCTGAATTGGTAAAATTGTCA
TGTGGTAAACGAGAGAGGGGCAAGATTGCATTTGAACGAGAGGAGGGGGA
AATTGAAAGTTATGGTGTCAAAGAgattgaaaaacaaatgaaaagtaTTT
CGAAGGCCGATCACATTTCAGACTCAAGCTTAAACTTTGATAGTCGAATG
AGtcatAGGTACATCGGAAATATAAAAAAGGCGGTATGTGAGGCGATTTG
GGAAAACAAAGCGAATTGGTTTCTTGATGCAGACAACAAGATAATTGAAA
AACGAGAAAAACTAATATCATTCAAAGAGATCAAGTGTCGAgattttttt
cacaagtttgagCTAAAATACGATAAATCAGTTGAAATCGGAATCCTTGA
CCAATCGGAAGTATATAAGTCATTCTACAGCAACAACTTCGTCGTCTCAA
CGGCTGGAAAAGAAGGATGCACCATCATAGACGTAGCTCTTTCAAAAGGG
GGGCCAGAGGCTATAGCGGAAAGTTTTTACAACTGCATGCGTAACCAGCA
ACAGCATGGGGGACAGTCGAATTGGGTTCTAACGACGAGAGCAAAAATTG
CCTGGTGCCTTCCATCCATCGATAGATTCGATCGTTTGATAAAAGACGCT
GTTGAGATTTATATCAATGGGGACGAAAAGATAAAACCCCATCGTGAAAA
CATGTTTTTCACGTCGTCCAGACACAATAGCTACAAAGTATCAAAGGTTG
TTGATCGCATTAATGCTGATTGTGGTCGATGTCCTTTCTTGGTATCCTCA
TAAATGGAAAGGGCTTCGCAACCAGTATCATATGCCACTCAAAGGTTTAC
CAGTTCATCCTACAACCAATgggttaaaattttcaagtcttATGGTGCTT
ATATTCAAGCTTTCGAGCACTTACACCCCAATAGAAGTGACGATGAAGAA
TATCAATTCCAGATAAAAGGAGCAGATTATGTATTTGATATGTTACTCCT
ATTGGACACTTTGAAACCATTGGTTGATGTTATGCTACAGCTGCAATCCT
TGGATAATCCTGTCTGGAAACTTAAAAAGTTGTTCCCTGAATTGATTGAT
CGATTGAAAGAAGCAGGAGCAAGAGATAAAGACGCTCTACCCAAACTCAC
CAAACACGAAAAAGATGTTAAAGTTTGTGGAAAATTCGATGGAGTAACCC
TATTGGCAGGATGGTTACCGAAAAGAAATGCAGACGGGACTTTCACGTGG
ACATCACGAAACAAGACTGACATCCGTAAAGAACATTCAGCATTTGTGAA
AGAACTTATCGAAGCCTTAGAGAAACGAATAAAGCCAGAAATCGAGAAAG
ACCACATCGAAACACTGGCAGTTCTTGATGCCGCTGAATTGGTAAAATTG
TCATGTGGTAAACGAGAGAGGGGCAAGATTGCATTTGAACGAGAGGAGGG
GGAAATTGAAAGTTATGGTGTCAAAGAgattgaaaaacaaatgaaaagta
TTTCGAAGGCCGATCACATTTCAGACTCAAGCTTAAACTTTGATAGTCGA
ATGAGtcatAGGTACATCGGAAATATAAAAAAGGCGGTATGTGAGGCGAT
TTGGGAAAACAAAGCGAATTGGTTTCTTGATGCAGACAACAAGATAATTG
AAAAACGAGAAAAACTAATATCATTCAAAGAGATCAAGTGTCGAgatttt
tttcacaagtttgagCTAAAATACGATAAATCAGTTGAAATCGGAATCCT
TGACCAATCGGAAGTATATAAGTCATTCTACAGCAACAACTTCGTCGTCT
CAACGGCTGGAAAAGAAGGATGCACCATCATAGACGTAGCTCTTTCAAAA
GGGGGGCCAGAGGCTATAGCGGAAAGTTTTTACAACTGCATGCGTAACCA
GCAACAGCATGGGGGACAGTCGAATTGGGTTCTAACGACGAGAGCAAAAA
TTGCCTGGTGCCTTCCATCCATCGATAGATTCGATCGTTTGATAAAAGAC
GCTGTTGAGATTTATATCAATGGGGACGAAAAGATAAAACCCCATCGTGA
AAACATGTTTTTCACGTCGTCCAGACACAATAGCTACAAAGTATCAAAGG
TTGTTGATCGCATTAATGCTGATTGTGGTCGATGTCCTTTCTTGGTATCC
TCATAAATGGAAAGGGCTTCGCAACCAGTATCATATGCCACTCAAAGGTT
TACCAGTTCATCCTACAACCAATgggttaaaattttcaagtcttATGGTG
CTTATATTCAAGCTTTCGAGCACTTACACCCCAATAGAAGTGACGATGAA
GAATATCAATTCCAGATAAAAGGAGCAGATTATGTATTTGATATGTTACT
CCTATTGGACACTTTGAAACCATTGGTTGATGTTATGCTACAGCTGCAAT
CCTTGGATAATCCTGTCTGGAAACTTAAAAAGTTGTTCCCTGAATTGATT
GATCGATTGAAAGAAGCAGGAGCAAGAGATAAAGACGCTCTACCCAAACT
CACCAAACACGAAAAAGATGTTAAAGTTTGTGGAAAATTCGATGGAGTAA
CCCTATTGGCAGGATGGTTACCGAAAAGAAATGCAGACGGGACTTTCACG
TGGACATCACGAAACAAGACTGACATCCGTAAAGAACATTCAGCATTTGT
GAAAGAACTTATCGAAGCCTTAGAGAAACGAATAAAGCCAGAAATCGAGA
AAGACCACATCGAAACACTGGCAGTTCTTGATGCCGCTGAATTGGTAAAA
TTGTCATGTGGTAAACGAGAGAGGGGCAAGATTGCATTTGAACGAGAGGA
GGGGGAAATTGAAAGTTATGGTGTCAAAGAgattgaaaaacaaatgaaaa
gtaTTTCGAAGGCCGATCACATTTCAGACTCAAGCTTAAACTTTGATAGT
CGAATGAGtcatAGGTACATCGGAAATATAAAAAAGGCGGTATGTGAGGC
GATTTGGGAAAACAAAGCGAATTGGTTTCTTGATGCAGACAACAAGATAA
TTGAAAAACGAGAAAAACTAATATCATTCAAAGAGATCAAGTGTCGAgat
ttttttcacaagtttgagCTAAAATACGATAAATCAGTTGAAATCGGAAT
CCTTGACCAATCGGAAGTATATAAGTCATTCTACAGCAACAACTTCGTCG
TCTCAACGGCTGGAAAAGAAGGATGCACCATCATAGACGTAGCTCTTTCA
AAAGGGGGGCCAGAGGCTATAGCGGAAAGTTTTTACAACTGCATGCGTAA
CCAGCAACAGCATGGGGGACAGTCGAATTGGGTTCTAACGACGAGAGCAA
AAATTGCCTGGTGCCTTCCATCCATCGATAGATTCGATCGTTTGATAAAA
GACGCTGTTGAGATTTATATCAATGGGGACGAAAAGATAAAACCCCATCG
TGAAAACATGTTTTTCACGTCGTCCAGACACAATAGCTACAAAGTATCAA
AGGTTGTTGATCGCATTAATGCTGATTGTGGTCGATGTCCTTTCTTGGTA
TCCTCATAAATGGAAAGGGCTTCGCAACCAGTATCATATGCCACTCAAAG
GTTTACCAGTTCATCCTACAACCAATgggttaaaattttcaagtcttATG
GTGCTTATATTCAAGCTTTCGAGCACTTACACCCCAATAGAAGTGACGAT
GAAGAATATCAATTCCAGATAAAAGGAGCAGATTATGTATTTGATATGTT
ACTCCTATTGGACACTTTGAAACCATTGGTTGATGTTATGCTACAGCTGC
AATCCTTGGATAATCCTGTCTGGAAACTTAAAAAGTTGTTCCCTGAATTG
ATTGATCGATTGAAAGAAGCAGGAGCAAGAGATAAAGACGCTCTACCCAA
ACTCACCAAACACGAAAAAGATGTTAAAGTTTGTGGAAAATTCGATGGAG
TAACCCTATTGGCAGGATGGTTACCGAAAAGAAATGCAGACGGGACTTTC
ACGTGGACATCACGAAACAAGACTGACATCCGTAAAGAACATTCAGCATT
TGTGAAAGAACTTATCGAAGCCTTAGAGAAACGAATAAAGCCAGAAATCG
AGAAAGACCACATCGAAACACTGGCAGTTCTTGATGCCGCTGAATTGGTA
AAATTGTCATGTGGTAAACGAGAGAGGGGCAAGATTGCATTTGAACGAGA
GGAGGGGGAAATTGAAAGTTATGGTGTCAAAGAgattgaaaaacaaatga
aaagtaTTTCGAAGGCCGATCACATTTCAGACTCAAGCTTAAACTTTGAT
AGTCGAATGAGtcatAGGTACATCGGAAATATAAAAAAGGCGGTATGTGA
GGCGATTTGGGAAAACAAAGCGAATTGGTTTCTTGATGCAGACAACAAGA
TAATTGAAAAACGAGAAAAACTAATATCATTCAAAGAGATCAAGTGTCGA
gatttttttcacaagtttgagCTAAAATACGATAAATCAGTTGAAATCGG
AATCCTTGACCAATCGGAAGTATATAAGTCATTCTACAGCAACAACTTCG
TCGTCTCAACGGCTGGAAAAGAAGGATGCACCATCATAGACGTAGCTCTT
TCAAAAGGGGGGCCAGAGGCTATAGCGGAAAGTTTTTACAACTGCATGCG
TAACCAGCAACAGCATGGGGGACAGTCGAATTGGGTTCTAACGACGAGAG
CAAAAATTGCCTGGTGCCTTCCATCCATCGATAGATTCGATCGTTTGATA
AAAGACGCTGTTGAGATTTATATCAATGGGGACGAAAAGATAAAACCCCA
TCGTGAAAACATGTTTTTCACGTCGTCCAGACACAATAGCTACAAAGTAT
CAAAGGTTGTTGATCGCATTAATGCTGATTGTGGTCGATGTCCTTTCTTG
GTATCCTCATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023623XLOC_023623Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039211-exon-sc0002043-1491911889:25367..27352TCONS_00039211-exon-sc0002043-1491911889:25367..27352Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1510915933:25367..27352TCONS_00039211-exon-sc0002043-1510915933:25367..27352Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1575043694:25367..27352TCONS_00039211-exon-sc0002043-1575043694:25367..27352Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1491911889:27555..27911TCONS_00039211-exon-sc0002043-1491911889:27555..27911Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1510915933:27555..27911TCONS_00039211-exon-sc0002043-1510915933:27555..27911Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1575043694:27555..27911TCONS_00039211-exon-sc0002043-1575043694:27555..27911Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1491911889:28042..28216TCONS_00039211-exon-sc0002043-1491911889:28042..28216Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1510915933:28042..28216TCONS_00039211-exon-sc0002043-1510915933:28042..28216Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1575043694:28042..28216TCONS_00039211-exon-sc0002043-1575043694:28042..28216Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1491911889:28446..28709TCONS_00039211-exon-sc0002043-1491911889:28446..28709Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1510915933:28446..28709TCONS_00039211-exon-sc0002043-1510915933:28446..28709Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1575043694:28446..28709TCONS_00039211-exon-sc0002043-1575043694:28446..28709Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1491911889:29030..30109TCONS_00039211-exon-sc0002043-1491911889:29030..30109Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1510915933:29030..30109TCONS_00039211-exon-sc0002043-1510915933:29030..30109Clytia hemisphaericaexon
TCONS_00039211-exon-sc0002043-1575043694:29030..30109TCONS_00039211-exon-sc0002043-1575043694:29030..30109Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00039211-proteinTCONS_00039211-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0002043supercontigsc0002043:25367..30109 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0457159	0.050521	0.0366304	0.0620169	0.0301489	0.0421305	0.121325	0.140655	0.176026	0.197495	0.12678	0.0804971	0.12277	0.949191	1.01435	0.328681	0.173935	0.330821	0.161705	0.107286	0.155429	0.043352	0.0848566	0.177865	0.0490778	0.0539194	0.0324549	0	0.0601155
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00039211 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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