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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039155 ID=TCONS_00039155|Name=TCONS_00039155|organism=Clytia hemisphaerica|type=transcript|length=950bp
tagAAACTAAACTATAAATAAAAAGTAACTGAGCTTGGAATTGTTTGGAT
ACAAATTCATATCTTGCTATGTAATTTGGCAAAGTGGTATCAATGGTTTG
CATTATTGTAAGACAATTTTATTCATGAATTTCTACAATTACCATATCGG
AAGAAAACTTGATGGATTTCCCCCAAAATTTCTATTGgcctttctctttt
tttcttgcttaaaCCATCTCTGAAAATGTTGTTTAGCATAAATTATatgt
aaaaatgtttttgggatCTGTCTTATAGTTATGAGAGgcatctctgaaaa
tttgaacaaaaagcGGTCGCCAGAACTGGAATTACAGTTATTTACATATT
TCTCGCATAAATTATCTCTGAAAATGTCGTTTTGCATAAATTAGGGATGG
ATTTATTAtgtaaaaatgtatttttaagcTGTCTTTTAGTTATGAGAAgc
atctctgaaaatttgaacaaaaagcGGTTGCCAGAACTGGAATTACAGTC
ATTTACATATTTCTCGCATAAATTATCTCTGAAAATGTCGTTTTGCATAA
ATTAGGGATGGATTTATATGTAAAAATATATTTGTAAGCTGTCTTTTAGT
TATGAGAAgcatctctgaaaatttgaacaaaaagcGGTTGCCAGAACTGG
AATTACAGTCATTTACATATTTCTTGCATAAATTATCTCTGAAAATGTCG
TTTTGCATAAATTAGGGATGGATTTATATGTTAAAATGTATTTGTAAGCT
GTCTTTTAGTTATGAGAGgcatctctgaaaatttgaacataAAGCGGTTG
CCAGAACTGAAATTAtggtcatttacatatttctCGCATAAATTATCTCT
CAGCATGttgttttgcataaattatggaTGAATTTTCACCTGAAAATGTA
TTAGTGAGTTGCATTTTAGTTACatgaaatttgaacaaaaatcggtcgcc Run BLAST on NCBI transcript from alignment at sc0002027:1936..2885 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039155 ID=TCONS_00039155|Name=TCONS_00039155|organism=Clytia hemisphaerica|type=transcript|length=950bp|location=Sequence derived from alignment at sc0002027:1936..2885 (Clytia hemisphaerica)
ggcgaccgatttttgttcaaatttcatGTAACTAAAATGCAACTCACTAA
TACATTTTCAGGTGAAAATTCAtccataatttatgcaaaacaaCATGCTG
AGAGATAATTTATGCGagaaatatgtaaatgaccaTAATTTCAGTTCTGG
CAACCGCTTtatgttcaaattttcagagatgcCTCTCATAACTAAAAGAC
AGCTTACAAATACATTTTAACATATAAATCCATCCCTAATTTATGCAAAA
CGACATTTTCAGAGATAATTTATGCAAGAAATATGTAAATGACTGTAATT
CCAGTTCTGGCAACCgctttttgttcaaattttcagagatgcTTCTCATA
ACTAAAAGACAGCTTACAAATATATTTTTACATATAAATCCATCCCTAAT
TTATGCAAAACGACATTTTCAGAGATAATTTATGCGAGAAATATGTAAAT
GACTGTAATTCCAGTTCTGGCAACCgctttttgttcaaattttcagagat
gcTTCTCATAACTAAAAGACAgcttaaaaatacatttttacaTAATAAAT
CCATCCCTAATTTATGCAAAACGACATTTTCAGAGATAATTTATGCGAGA
AATATGTAAATAACTGTAATTCCAGTTCTGGCGACCgctttttgttcaaa
ttttcagagatgcCTCTCATAACTATAAGACAGatcccaaaaacattttt
acatATAATTTATGCTAAACAACATTTTCAGAGATGGtttaagcaagaaa
aaaagagaaaggcCAATAGAAATTTTGGGGGAAATCCATCAAGTTTTCTT
CCGATATGGTAATTGTAGAAATTCATGAATAAAATTGTCTTACAATAATG
CAAACCATTGATACCACTTTGCCAAATTACATAGCAAGATATGAATTTGT
ATCCAAACAATTCCAAGCTCAGTTACTTTTTATTTATAGTTTAGTTTcta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039155-exon-sc0002027-1491911889:1936..2885 | TCONS_00039155-exon-sc0002027-1491911889:1936..2885 | Clytia hemisphaerica | exon |
| TCONS_00039155-exon-sc0002027-1510915933:1936..2885 | TCONS_00039155-exon-sc0002027-1510915933:1936..2885 | Clytia hemisphaerica | exon |
| TCONS_00039155-exon-sc0002027-1575043694:1936..2885 | TCONS_00039155-exon-sc0002027-1575043694:1936..2885 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002027 | supercontig | sc0002027:1936..2885 . |
Blast
The following BLAST results are available for this feature:
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