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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00039076 ID=TCONS_00039076|Name=TCONS_00039076|organism=Clytia hemisphaerica|type=transcript|length=1283bp
GCTtaatactaaaaagtcttaaatTTTACTGAGTAATGTGTTATGTAGGA
TGTAATGTAGAGTATAAAGCAATAGCAATGAAAtataagccgaaggctag
aaatcaatctctttggtaggatttgaNNNNNNNNNNNTAATACTAAAAAG
TCTGAAATTTTACTGAGTAATGTGTTATGTAGGATGTAATGTAGAGTATA
AAGCAATAGCAATGAAAtataagccgaaggctagaagtcaatctctttgg
taggatttgaagccaaaaaatcctaccaaagttgcgcggcctagaACGAC
CCGCCTGGATTTTTAACAaatgccggattgaaagtaaaatttaccgccaa
atttttgaaaaagtatcactcaaaaacaaagaaatcgctagattcaatcc
gacCTAAAAAATTCGGCGcactttttaaggcttcacgttttcttgcctaa
gaaaggttaaagcttctcctctagcccttcgggcttaaacTCAATGAGCA
ATAGGTGTCAAAATGACGTCTGAAATGCTGAAATTTAACTTGATTGGATA
CATTTCGGGAAGCACTCGACATAAATATTCCAAACGCATGCTCTGAAATA
CTGATTGAAGGTGGAAGAGATTCCAATGGTTTTAACTCTCTAGACCACCT
TTTCTTTGTTCGCTTGACCCACAAGGGTAATCTAGTTCATTACAGATTCG
CTTCATCTAGTTCGCTTACGTAGCAGGCAGCTACAAAGAAATCATCGGTG
TCATCAAGGAAAACTAAATAATCgtcacttttatttttacacccctgtag
CATCAATAAACCGCTGAGAATTTCTTAGCAGGTGGGAAGCTTGAAGGGGC
TAAGTGCTAACGGGAATGgcaaatctctttttttatcATCGAGATGGTTT
TTTAGTCCACTTTTCAATTGATATGAGTTCTGGGGTTATACGTTTGTGTG
TTTTTACAATACCTTGCATCTGTGGTACATCACATCACATCCTGTCTGTA
GAACTGGCGCTTAAACCCTTTAGGTAGATCTCCTATTTGACGATGGATTA
GGTTAAAAGGTTTGATCACCAGGTCAAACtaagaggcccccagcggacca
aaaattcacgcattcacgcaagtttttctcaaattcatgcaaacccgatt
ttttgggaaatcggggaaattttcggaaaaaatcaggGAAATTGTCAACG
AAAGGCGAAATTTGCACAAATTTGGGTgagaaggaaaaattcacgcgttc
acgcaaaaaacagggcagattcacgcattcacg Run BLAST on NCBI transcript from alignment at sc0002006:13620..14902 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00039076 ID=TCONS_00039076|Name=TCONS_00039076|organism=Clytia hemisphaerica|type=transcript|length=1283bp|location=Sequence derived from alignment at sc0002006:13620..14902 (Clytia hemisphaerica)
cgtgaatgcgtgaatctgccctgttttttgcgtgaacgcgtgaatttttc
cttctcACCCAAATTTGTGCAAATTTCGCCTTTCGTTGACAATTTCcctg
attttttccgaaaatttccccgatttcccaaaaaatcgggtttgcatgaa
tttgagaaaaacttgcgtgaatgcgtgaatttttggtccgctgggggcct
cttaGTTTGACCTGGTGATCAAACCTTTTAACCTAATCCATCGTCAAATA
GGAGATCTACCTAAAGGGTTTAAGCGCCAGTTCTACAGACAGGATGTGAT
GTGATGTACCACAGATGCAAGGTATTGTAAAAACACACAAACGTATAACC
CCAGAACTCATATCAATTGAAAAGTGGACTAAAAAACCATCTCGATgata
aaaaaagagatttgcCATTCCCGTTAGCACTTAGCCCCTTCAAGCTTCCC
ACCTGCTAAGAAATTCTCAGCGGTTTATTGATGctacaggggtgtaaaaa
taaaagtgacGATTATTTAGTTTTCCTTGATGACACCGATGATTTCTTTG
TAGCTGCCTGCTACGTAAGCGAACTAGATGAAGCGAATCTGTAATGAACT
AGATTACCCTTGTGGGTCAAGCGAACAAAGAAAAGGTGGTCTAGAGAGTT
AAAACCATTGGAATCTCTTCCACCTTCAATCAGTATTTCAGAGCATGCGT
TTGGAATATTTATGTCGAGTGCTTCCCGAAATGTATCCAATCAAGTTAAA
TTTCAGCATTTCAGACGTCATTTTGACACCTATTGCTCATTGAgtttaag
cccgaagggctagaggagaagctttaacctttcttaggcaagaaaacgtg
aagccttaaaaagtgCGCCGAATTTTTTAGgtcggattgaatctagcgat
ttctttgtttttgagtgatactttttcaaaaatttggcggtaaattttac
tttcaatccggcattTGTTAAAAATCCAGGCGGGTCGTtctaggccgcgc
aactttggtaggattttttggcttcaaatcctaccaaagagattgacttc
tagccttcggcttataTTTCATTGCTATTGCTTTATACTCTACATTACAT
CCTACATAACACATTACTCAGTAAAATTTCAGACTTTTTAGTATTANNNN
NNNNNNNtcaaatcctaccaaagagattgatttctagccttcggcttata
TTTCATTGCTATTGCTTTATACTCTACATTACATCCTACATAACACATTA
CTCAGTAAAatttaagactttttagtattaAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00039076-exon-sc0002006-1491911889:13620..14902 | TCONS_00039076-exon-sc0002006-1491911889:13620..14902 | Clytia hemisphaerica | exon |
| TCONS_00039076-exon-sc0002006-1510915933:13620..14902 | TCONS_00039076-exon-sc0002006-1510915933:13620..14902 | Clytia hemisphaerica | exon |
| TCONS_00039076-exon-sc0002006-1575043694:13620..14902 | TCONS_00039076-exon-sc0002006-1575043694:13620..14902 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0002006 | supercontig | sc0002006:13620..14902 . |
Blast
The following BLAST results are available for this feature:
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