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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038994 ID=TCONS_00038994|Name=TCONS_00038994|organism=Clytia hemisphaerica|type=transcript|length=1180bp
TTTTGACATAAAGTGatagaaaattgtaaaaatcgCATTAGTTTTAAATG
AGGTTGAGGGTAATTCATTTGACTTCAAAACCCAGAGAGAAATGTTCAGT
TATTTTACCATTTAAACTCTTTGCAGATCTATTCAAAATGCGGGCTGCTT
TCTAGCACATTAAACCCACATAGCTCAATATTATCCCTCAGCCAGTGTCA
AATTACCCCAATATTTGAACTTCTCATTTCAGCTTCTagaattaatttat
ttttctcctCTGATGTTTTCtgctgatttttttctttttcagatacAGTA
TCAAAACTCCACTGTGTGGTCACTGGGTTTATTTGAAATGAATCTTTTGT
GGTATTTTGCTGTCATCTTTTCCAACATCTTTTGTCAAACAGTTCATATC
AAAAGCTTATTTATTTGGAAAGGTAAGATTTCTTGGTGTTCGTCAATAGC
CAATAGaacataaataaataaataataataatgatgatgCTTTATATTCC
TTAAACATAGTATCATAGTTAAGActttttcatttagatattcTTCGTCG
TAGATTTTGGTTGACTCCTCTGAATCTTCAGTGGATTCGTCAACACCATG
AATAATTAGATTGCATGCCGTGGATTGAATCTGTCGTTCTCCTGTTTTCC
CTTCGAAGTACGTTTTCTATGTTCTTCTCGATTTACCTCGACGCGACTGC
TGCGTAGTTTTGTGAtttattttctcctttcttctcaATTATGTCTTCCA
TCTTCTTTTCGATTGTTGCCATTCTGGTCTCAAAGCTATCCTTTATTTCG
CTGGTCATTGTGTTAACGTCTTTGGACTTAAGTTGAGTGATTTCTACGTC
CTGGGATTTCATTATGTTTTCGCAAGTTTTTATCTCCTTTTGGAATCCTG
AAACTGTTGATGTTTCACATGAATTGACCCGTTCCAATAGATCAGGAGTG
ATCACGACACAGTTTTGACAAATGAAAGCTCTCGATTTGTATGTTAGACA
TAATTGGATTTGATAGACGGGGAGCTTTGAACAAATGTAGTGTACGATTC
GATTTCACTTCTTAAATTCAAGTGTGTCTTTGGATCTTCCTTCTTCACTT
GTAACACATTCAGATGGGCTGCAAAGGTCGTGAATTGATGCTGAATTCGG
TTGTTTTCgtagattttcctgaattttctc Run BLAST on NCBI transcript from alignment at sc0001983:31543..32722- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038994 ID=TCONS_00038994|Name=TCONS_00038994|organism=Clytia hemisphaerica|type=transcript|length=1180bp|location=Sequence derived from alignment at sc0001983:31543..32722- (Clytia hemisphaerica)
TTTTGACATAAAGTGATAGAAAATTGTAAAAATCGCATTAGTTTTAAATG
AGGTTGAGGGTAATTCATTTGACTTCAAAACCCAGAGAGAAATGTTCAGT
TATTTTACCATTTAAACTCTTTGCAGATCTATTCAAAATGCGGGCTGCTT
TCTAGCACATTAAACCCACATAGCTCAATATTATCCCTCAGCCAGTGTCA
AATTACCCCAATATTTGAACTTCTCATTTCAGCTTCTAGAATTAATTTAT
TTTTCTCCTCTGATGTTTTCTGCTGATTTTTTTCTTTTTCAGATACAGTA
TCAAAACTCCACTGTGTGGTCACTGGGTTTATTTGAAATGAATCTTTTGT
GGTATTTTGCTGTCATCTTTTCCAACATCTTTTGTCAAACAGTTCATATC
AAAAGCTTATTTATTTGGAAAGGTAAGATTTCTTGGTGTTCGTCAATAGC
CAATAGAACATAAATAAATAAATAATAATAATGATGATGCTTTATATTCC
TTAAACATAGTATCATAGTTAAGACTTTTTCATTTAGATATTCTTCGTCG
TAGATTTTGGTTGACTCCTCTGAATCTTCAGTGGATTCGTCAACACCATG
AATAATTAGATTGCATGCCGTGGATTGAATCTGTCGTTCTCCTGTTTTCC
CTTCGAAGTACGTTTTCTATGTTCTTCTCGATTTACCTCGACGCGACTGC
TGCGTAGTTTTGTGATTTATTTTCTCCTTTCTTCTCAATTATGTCTTCCA
TCTTCTTTTCGATTGTTGCCATTCTGGTCTCAAAGCTATCCTTTATTTCG
CTGGTCATTGTGTTAACGTCTTTGGACTTAAGTTGAGTGATTTCTACGTC
CTGGGATTTCATTATGTTTTCGCAAGTTTTTATCTCCTTTTGGAATCCTG
AAACTGTTGATGTTTCACATGAATTGACCCGTTCCAATAGATCAGGAGTG
ATCACGACACAGTTTTGACAAATGAAAGCTCTCGATTTGTATGTTAGACA
TAATTGGATTTGATAGACGGGGAGCTTTGAACAAATGTAGTGTACGATTC
GATTTCACTTCTTAAATTCAAGTGTGTCTTTGGATCTTCCTTCTTCACTT
GTAACACATTCAGATGGGCTGCAAAGGTCGTGAATTGATGCTGAATTCGG
TTGTTTTCGTAGATTTTCCTGAATTTTCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038994-exon-sc0001983-1575043694:31543..32722 | TCONS_00038994-exon-sc0001983-1575043694:31543..32722 | Clytia hemisphaerica | exon |
| TCONS_00038994-exon-sc0001983-1510915933:31543..32722 | TCONS_00038994-exon-sc0001983-1510915933:31543..32722 | Clytia hemisphaerica | exon |
| TCONS_00038994-exon-sc0001983-1491911889:31543..32722 | TCONS_00038994-exon-sc0001983-1491911889:31543..32722 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001983 | supercontig | sc0001983:31543..32722 - |
Blast
The following BLAST results are available for this feature:
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