TCONS_00038990 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00038990
Unique Name	TCONS_00038990
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1482

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0001983:958..16223-
coding sequence from alignment at sc0001983:958..16223-

transcript sequence

>TCONS_00038990 ID=TCONS_00038990|Name=TCONS_00038990|organism=Clytia hemisphaerica|type=transcript|length=1482bp
tttagagataaaaaccaaaattttgaatgaaaaaggaaataaaCACAGGA
TATTGAAGTTTGTCAATTCGAATTTGGGTTCTTTTTGTCCAAATGCTTGT
TAGATGGCTTCAACTTCAACCAAAGAGGTTAAGAAGCACCACAAGAAGTT
AAATGTGTGTTATAAAAGACCAGGTTACAGAGAGTCAAGATGGGAGAAAG
CAGTCAAGGTATACACGATCAATCAAGAATCGAAATATGTGATAGTGGTA
GGTGTTCCAGCTGTGGGTGCAACAAAAGAGCTCTTGCAACAATTTGCTCT
TTATGGAGATATTGAAGAATACCGCCACCTTGACGAATACCCTGTAGAAG
AATTTACCGAAGCTTATTGGATAAAGTACAAACGTATACAATCTTCAAGg
cATGGTAAAAAGAAAATGGATAACCGCTCCTTCTTTGGAGGCTTGCTTCA
TGTCTTTTATGCACCTGAGTACGAAAGTGTGGATGATACACGCTGTAAAC
TGATGGAAAGAAAAAGATCTGCGCTCAGGAAATGCCAAGAATATTTTGGT
GAGGATGATGGCAGCAGCAAAAAATCTAATCAACAGCAAGAACAATCACC
CTCAACTGAAACGCACTCGACACCTAGAACAACCACATCCACCAGCCGTC
TAGCGCCATTATACGAACCACCCTCTGATCACTTGGTATCTCAACGCCCA
TCGCCCTTAAATTATGCTATACCAAAGCCACCTGTACATAACCACAAGGA
GAAAATAAACAACTTTACTACTCCCGACATCGATCAAAGGGGTGGGCATG
AAACACGTTTACCTGAGTTTCCAAGAGTGCCAACAAAACAGTCCAATTGG
GATAACTTCCCTCTAATATCTTCCGTCGAATACGTGGTTCTTCTACGTAA
CAGGGAGGTACGCCGTAATCGTACGCGTTATCGATCAAGAATTGAATATA
TGCTTCTGCTGTTACGCGTTGGCTAGCAACTTCGTCAATCAAAGGTGCCT
TTAAAACCTCTTGACCAATCTTGAACAGCAACTCTTCGGCGTTTTCACGT
CGTTCTTCCAACGTCATTGCGGAAGCTTCGTAACGTCGGTGTTTCGGTAC
CGGTATGATCGTTCGGTTTCCGATTAATGGACCACTTTGTTTTTCTCGTT
CCACTTTCTTGTTCTCGTGTTGTCTCCTGAGATTTCCATCAAACCTCTTA
CTGAgatcaaagatttattatacactggataaacgactcataaaaatgtg
gagagcgatcattgtatttccattgtttcagaaaacaactgtcatggcgg
ctcgaaggtgtctgattttttaaaatatttattagtcttcttttaaaaaa
gttctctagctctttctttttgtacatttgcaaaaaaaaacgtttgaaag
caagctggatacatttgtgaaatctggtgtgagaaaatcatcattagaca
ggaaattcagacaaaatgcttatagtgacacg

Run BLAST on NCBI

protein sequence of TCONS_00038990-protein

>TCONS_00038990-protein ID=TCONS_00038990-protein|Name=TCONS_00038990-protein|organism=Clytia hemisphaerica|type=polypeptide|length=290bp
MASTSTKEVKKHHKKLNVCYKRPGYRESRWEKAVKVYTINQESKYVIVVG
VPAVGATKELLQQFALYGDIEEYRHLDEYPVEEFTEAYWIKYKRIQSSRH
GKKKMDNRSFFGGLLHVFYAPEYESVDDTRCKLMERKRSALRKCQEYFGE
DDGSSKKSNQQQEQSPSTETHSTPRTTTSTSRLAPLYEPPSDHLVSQRPS
PLNYAIPKPPVHNHKEKINNFTTPDIDQRGGHETRLPEFPRVPTKQSNWD
NFPLISSVEYVVLLRNREVRRNRTRYRSRIEYMLLLLRVG

Run BLAST on NCBI

transcript from alignment at sc0001983:958..16223-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00038990 ID=TCONS_00038990|Name=TCONS_00038990|organism=Clytia hemisphaerica|type=transcript|length=15266bp|location=Sequence derived from alignment at sc0001983:958..16223- (Clytia hemisphaerica)
TTTAGAGATAAAAACCAAAATTTTGAATGAAAAAGGAAATAAACACAGGA
TATTGAAGTTTGTCAATTCGAATTTGGGTTCTTTTTGTCCAAATGGTGAG
TTATTATGTCTGTTGCGATACTCCTTATATAATCAGTTGTTTGAATTTTA
CTGATTTCTGTAAGTAGAAAACCACTGCACATATTATTTATCTTTTCAAA
AACATTGGCTTTCAGGTAAGTTCCAGGTAATACTTTCGATAAATCACTTA
AACAGATTTTTATTAATTAAGGTTAAAGCTAGGGCTAAAAACCTGCAGAT
TTGTTCTTCTTTCAAGAATTCATTCAATTGTTCAATATTACAGCTTGTTA
GATGGCTTCAACTTCAACCAAAGAGGTTAAGAAGCACCACAAGAAGTTAA
ATGTGTGTTATAAAAGACCAGGTTACAGAGAGTCAAGATGGGAGAAAGCA
GTCAAGGTATGCAAATATCTTTTCTACTTTTCTACTACTTTGTTTACACA
TTGACACATAACAGGTACTTTTTACAACCTTTCCAGAGAGACCCTTCCAC
TGGCTTTGGCTATGCCCAAAATAAGGTAATTATAGACCAAAATATAAGAG
CAAAATAAGGGACTCTGAAAATATTTATCATAAAAGTGTTCTTGCAAAAA
GGAATGGGCCATTCCATTTTATATCCATACATGAGGGTGGACGAGTATTT
CCAGAGGGTAGTCTGAGAAAGATTTCCAGGGGGTATTTTTTCATTTTTCC
AAGGGGGTAAATGGTTATTCTAAAATTTCCAGGAGTTAAAGACTGATTTT
AGTTTGTCCATACTCGCTTTAATGTATGAAAAGAATTTTTCCAAGGGTAT
AATTGCAAATTTCGCCATTTTTCAGTGGTTATCCATACGTTTTCATTATT
TTCTTTTTGACTTGAAAAAGTTCGTGTATGGTTTTTTTACGGAACAGCCC
GATGTATGCGGTACAGACTGTCTTTGGGTAGCAAAGTTGATGAAACTGAA
ATTTGTGAAACTGAAAGGGCAGGGAGAGTAATGGTTTCATTTCTTTCCAT
TATCATTTTTTCCACAGGTATACACGATCAATCAAGAATCGAAATATGTG
ATAGTGGTAGGTGTTCCAGCTGTGGGTGCAACAAAAGAGCTCTTGCAACA
ATTTGCTCTTTATGGAGATATTGAAGAGTAAGTTTTTTAATTAAGGAAAA
CAGCTTTCTTCGATGAGGTACTTGTATAAGACAAGTTATCACTTACAGTA
GCGAGTTTATGTTTCCTGCGGCAGAGACGGTTAGCTTCGGATTTGTCTAG
ATCCCAATCAACAGAGGACCAGGCATTTTTATTGTCCCCGATTCTACGGG
TTAAGACTGCGGGCTATTCCAAATCACTCACTTCAGTCGCTTTAACCGTC
CTCAAAAGTGGAAATACATAAACTGGCTAGTGTGAAGAGGCTTCAATCGA
TTTAGTTAATAATGATATCTTGTTCTTAATGTTATCAATTAATGGTTTCT
TTTTTCATTTTTAAATTTGGGATAATTGTTAGTTTATTCAAAATTGATTA
AATTTTAACCAAGTATGATTTTGATTAATTTGGATGTTTATTTGATGTTA
TCTTTCAATTTTCTGTTCAGATACCGCCACCTTGACGAATACCCTGTAGA
AGAATTTACCGAAGCTTATTGGATAAAGTACAAACGTATACAATCTTCAA
GGTAATTATCTAAATTAAGTTTGTACTGTAGAAGCGTTGTCAAGTCGCAG
TGTCTGTCAGCGCCGTGATTCCTACTCCTTCGTGGGTAGGACCCATCCCG
AATGCATTCGGAGGGCTCGTATCTCTATCTATCTCTACTGTAGAAGTAGT
AGTTAATTAGATGTCACATTTTTCACTTTTTGGAAATGTCGCTGAAAAAA
ATCGCAAGTTTGAGATATACAACATTGAACAGCAATTTTCTTTCTTTCTT
TTGTTAGAAAAAGCTGTGTAAATAAATAGATAACCAGGCTCTGCCCTGCT
CTGCTTTAATTCGAAACTAAAAATTTAGTATGATTTTAGAATTTATCTCC
AATATGGCAGTTGCATATAAAGTTCAGCAAATTGATTTTTTCTACGCTTT
CATTTTTTTTTTAGGCATGGTAAAAAGAAAATGGATAACCGCTCCTTCTT
TGGAGGCTTGCTTCATGTCTTTTATGCACCTGAGTACGAAAGTGTGGATG
ATACACGCTGTAAACTGATGGAAAGAAAAAGATCTGCGCTCAGGAAATGC
CAAGGTAGAAATCATTTTCATTCGGATTTTCTTTATTTATAAGAAAAAAG
TCGAAAGTGCTTTTATCTGCTTTTATGGAGAACGATGACTTCCACAAAAA
ATTAAGATTTTTTTGTTTTCTGTTCTAAACAGTATTTTTATGGGGAGGGG
GGCTGCGTCTGTCCTGCTCTCAGGCTTAGCCTGTAAAAAAGTGGAATGAG
CGATGGCAGAACGGCTAGAGGAAAATCTTCTGCATGGGACTTGAAGTCAC
TTATGTTTATTGTATAAACTAGGCGGCCTGCGTGGATAACGCTGGATTGA
AAGTAACATTTACCGCCAGATTTTGAAAAAGCGTGCCACACGAAAAACAA
AGAAAGAGCTAGATTCAATCCGTCGTCTGAAATACGGCGCCAATTTTCAA
GAATTACTTCCTCTTGCGTGGATATCTCACTAACCTATTCTTTCTCAAGT
TATCTACCCCGCACAAACACAACGTTGTTTCAAAGTTTGTGTAATGTTCA
CAAGGTCCATATAACGTTAGTTGAATGTCAAAGCAAATTTGTGTGTCAGA
TGAACTACTTCATTTATATGCCATTGTTTGATCTGGTTTGACAGTTGTAC
ATTTTCACGACTTTGGTTTCAAATTTGGATTCAGATGAAAGATATGTTGC
GCACTTTCAAACACTCTGTAGCTACCAGTCTGTATGTATGTACATTTGTA
TTGGAACTGAAAATAAATTTGTTAACATTCATCTTGTTATTCCAGCGTAT
GTATGGAAAAGCTAGACCGCATACATGATTTTAATATTAATTGAGAAGTT
GACTCTATTCTCGATACAGTCAATGTCAATATTAATGAATGAATTACACT
AATGTATTGATAATCTAAAGTTGCATAGGGACAAACTTATATTGATATTT
TTATATTGATAATTCTTTTGCTGCGAGTTCTAAACTAAGTTTTGACTCAA
AAGTTTTAATGAAGGTTTTGTTTTCATCCGACATTTTTTTCTTCGATACT
TACAATACAATTTTGATTGCAAATTTCTTGAGAAGGAAAGTATCAACATG
AAGTGATAGCTGTTAATTGATAATTTAAAAACTAATTTCAAAACGCGTCG
ATTTTACCACATAGTTGTAATCAGCTGTTTTTTATATTTTACGGACCTTA
TTCTTGGTGAAAATATTAATATTACCAAAGAAAAGGGGAAACTCTTGGTC
CAAATAATTTATCCTGGTTGGCTCCTATTAAAGGAAAAAGGTTTTGCGAT
GTGGAATGCATTTGTTCACTTTCTTCTCTTGGATCTGATTTTGATGTCAT
CTGTATCCTCTATGAACCAAGGATCTTTCCAATACACGCAAACTTTCCGT
GATAAACGATTCACCTTATACACCTACTTGAGATTGAACAGAATAAGGGA
ATTAGATTGTATATTACAATGCTCGGATGATGCAGAATGTGGCTCCATTA
ACCACCAGAAAGATGAAGAGATTTGCGAATTGAATCAAATATTGGATGAA
GATCACCAAAGTTCACCAATGCTGAAGTCGGATCAAGGATGGAACCACTT
TATCAAAAGCAAGAAGGTACGATGTTCAATAGACAGTTCGTAGAGAGTAC
TCAGACATAGTTCAAAACATTGGCTAGGCTCCCATAAAAGGAAAGGCAAA
TGACAATGTTTTTAAGGGACAGCTAGTGAATCCCTGTCTGAACCTTGATG
CTGTCAGGGCTGCACGCATTTCTCTTAGCTTGAATAAGGTTTTTCTTACA
GGGTTCTTCCCTTTTTTGACTTTGACTTTGATTCTGATTTATACAATTTG
TTGTAGATTCAAAAGGGAGTTCCAAACGACCAAGAATTATACATAGCAGA
AGGTAAGGAGACTTTGTTGACACTGAATAGCTTGATCCATATTCAGTAAA
GTAGGATCTTTTTTATCTTCATGCAAGAATCATCAAAGGGAATCATATGA
TTAGGCTGGAATTTTTCCTCTGACAAAGAATCAATAATTTAGAATTTAAA
AACTGAATTTGGGAAATCTGAGGTTTTTATTCGTAATCTATAATTTATCA
AAAGTTATATCAATGGCCATTTTATGTTTGCGGTGGCTTATTTTAACAAC
CCAAATTAGAAAGAAAGCCGAAATTTATGAAAGTCACGAATAAGACTCCT
TCCTTCTTGGGGGGAAATGTCAGGGGAAAGCGACGAAAATTATGAAAGGT
TACGAAACTTTTCCCCTGAGAAATGTTTTCCCCGATTTTTTTCTCCGACC
AAAACTTTTATCCGAAATTTTATACCCTAGCCAAAAATTCAATTTTATAT
TTGTAACCTTAACCGAAATTTTTGCTTTACTTACTTCGAATTATGAGATA
TATATTTTGCGGCCCGTGAAGGAAATTATTTCTTTTGGACGATTCTATAG
TCAACTAATACATTTGATCGGGGAAAAGAGATGAGTTTGAAATTTTGATC
TGATAGTATTCAGGGGGGTCTTTGATAATGTGAAGTATCTGTCATAATTT
GCTTTAAGGCTCTAATAAAAAGTTACGTTATGACAACATGGTAAAGTATG
GGCCATCTTTACACTTGAAAGTAACAAAAAACTGTTTTGAAAAATAAACA
TTTTCACTCGTGTTATTTAGAAATGGTTCCATCGAGAAATCGGCTTATCA
ACACAATACCGGTCATGAATGATATATGGGAGCTTTCTTTTGACTTTACA
CTGAAACAAGATCTACCATATACCACTAATATCCTCAGGCTGTTCATTGC
TGGGTTGGAAAACCAAGAATATGTTATAGGTGGAAGAATTGCAGCTGTTT
TCGTTGACAATATGAAACTTTTGGTGAGATTTGCCACTAATACAAACCCT
AACTATTCCGTTACCATTCCTATCGAACTGAACAGAAATTATCATTTGAA
GATTCGCCAACTTATAACACTTTATGGTGCTTTAGTGAAACAAATCATTT
TCGATGGAAATCCAATCGCTACAATTTCACACGGCAGTTTTCCAACGCAA
TTCAAAAATGTAGAATTCTTTTTCTCTGACAAGCTCAGAAAGCCAGCTGC
AGTACACGTCACTAACCTTCGTTATACGTCAAACCTGTTGTACCAAGGTA
TGTCAATTCTGATGGCTTTACAAGGGGATTCTTCTTTATTTCGTCACAAT
CTACCCATCGAATTTTTATTCTGAGAAAGTAAGCGATTTGAATTAAAGGT
AAAGAAGAACTGACGCGACAAGAAAAACTGCATCTGGTATATACTGATTT
GAATCTGATGCTTCCTGCTAACTTTTGCTACAAATTTAGGAAACAATTGT
CTTTGGAAATACTTCTCCAGATAGATCTCGTATCCCCCCTACAGGGTAGC
CTTTTATAGACTTAAACGTAATCACTAACTCAATTATCTTCACTTTTTTA
CAGGGAATTTCTTCCCAACCACAGAACATTTTATCATAATCAGAGAGTTC
CCAAGATGGCCACCGTCAACTACAAATTGGTTTTTGCAATTCAAACTTGA
TCTATCTGCCAACAATGCAAATATTCCATACAAAAAGTATTCCAAACTAC
TTTTCATAACTGCAAGAAATGCAAATGATCAAGTCCTTTGGCTACCTAGC
TTTGAATTCACTGGAACTGATTGGCGCCTCGGTTGCTACACGCAAGTAGT
TTCGAACTTAAAGCGGTATACTACAATTGATATGAATGGAGAATTTGGTA
AAGAATCAATCTTACGGTTTGAACATAGAGTGCACGATCTATTGGAACGT
AAATATAAATTCCAAACTTACCTGAACGGCGTATTGAAAGGTACCAAATA
CGAGGTCTACGATCCAGNNNNNNNNNNNNNNNNNTGATGCTAGAATCTGA
CGTTTCTCTTCTTCATTCCTTAACACAACTTTTAAGGGTCGCCAACGTTT
CGTCCTGAACATCTCGTCCTTTCGAGCTCCTATTCTTTCTACGCTGACGA
TGTTTACCTTTAGTCCCGTTTGGTTGCGCACAAATTCTTCGACGTAATCT
TTATCACTTGTTCGCTGTTCTTCAAGGGTTTCATGTTTGAGTTCATCAAT
GTTGTGAACAATGATATTGCACTTTGTCAGGTTCNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCTCTTCTTTGATG
AAGTTCTTGATCGTTACCTCTTGTTTCTTTAACTCTGTAATGCTAGCATA
TGTCTGTTGTTTCATAGTTACCTCTTGCTTCTTTAGTTCTTCTTTGGTAG
TTTCTGCGTATGTCCTTTGTTTTTTATCTTTAGCGACATCTTCCTTATCT
AAAAGTTTCTCGATTTTCTTCTCCAGCCTGTCCANNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCGCACTCTTTCTGTACTTGTTTTGATCTTTTCCAGAAGA
ATTGGCGTGACTGTAACACATTTGGCACATTCGAAGCGCCGGCTTTTGTA
TTGGAGACACAGCTGTATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATGAAGCA
GTTGTCAGGGGTGCAGAATCCATTATTTTGTTGAATTTCGATTTTTTTTG
GTATTTCTTTAGTTTTCGCCATTTTGATGCATTTCGACGAGCACGAAGGG
TGTACTTTTGATAAAGTGCACTACAAGATGTTATTCTAGCTGGATACACA
CAAAGGGTGTGTTTTGGGACTGCTTAATTGCAAGTCTGACAGAAAAAATC
TGATGTATCTTTATAGTTTTCACTCGCATCCAATTTGATTTATTTTGCAC
ATTGTGTCGATATCTCAGGCTTATTTTCAGGCGGCTTCAACAAAATAAGA
TATGAAATCTAACTACACTGTAAGGTTCAGAAACGTTCGGTAAAATGTAC
ATTTTCACTGCTCAAGGGCTGCACCGTAAGGGTCCATCTTTTTGGTGGCA
CACGCCGTCGTTTAGAAATCGAGTGCCCCCCCTCGGATTACTATACTAAA
TTAAGCTAAATGTATTTCAGCATTTATTTGATTTTGCTTTGTTTTTCTTT
CGAAGACAACGTTCACAGAAAAAATGAAAAATAAACACAAATTCAATTAT
TTTAGTTTTGAGGCGCCAGTGCAATGAAGCCTTATCGAGGTTGTATATCG
GCCTAACAATCAAACTAGACCCAGCGAGTGAGGTTGAATGAGCGGGCAAC
CATTATCATCGCGGTCGGCTTTCTAGGAGACTGGTAATAAATTTACAGAG
AAGATTCTTTTCGACGACGGTAACGAAAACACAATAAAAGTGTAAGAGCT
CTCTTTTGAAAAGATGCAACAAACTCTTGCATTGTGAATTTAGGTTAAGC
TTTTCAATTGCTCAAAATAGTTTGCAACCCACTGTAGAGACTCGGGATAC
TTTAATGGGATTAAATTTCGCGGATCTCGCAGTTTTGGATGTCCTCCACG
AAATTAAGTCCCAATGGAAATTTGGAAAGGTGTTATCCGCGAAATATTTT
TAAATAAAACTCAAAAAAATTTTTTAAAGGTTTACTGACATTTGGCAAAA
AAGAAGTGCTGGTCGCCCGTATTTCAACAACCAACATGTATGATTTGTCT
CCTAATAGTGCCATCCGCGAAATTAAATCTCCGCGAAGTCTTAAAATTTC
GCAGGTGAGCTCAACCGAAACGAAATTAAATCGCTACAAAAATTTATCCC
ATTAAAAAAAGAGTTTTATCGGGAGTTTGCTTGTTTGGTTTTGGCGGCAG
CCTAACAATGCGGAAAAAAACACCCCTACTTAGATCCTGGAGCTGGCCAG
CCGCTGATCGCTGCCTAAACACCACTACAGCTCAGGAGGGCTGGACAGAA
ATTGTTAGTTGCTCCCCATTGAAGCGTGGAAGGTGGCACAAGTTAGGTGG
TATGAAAGTGTAGACGAATGAAGTTTAAGTGGACAGTCATCAATATTGTT
ATTTTAAGATGGAGAACTTTCTAAGAACCCTCTATAAGAACAAAACAGGA
AAGTCCAACCTCGTTCCCATCGCATTATCAGCTTTTTGATGCTTACTGGT
GGCGCTTGATAATAAATACCGTGGCATTGTCTGCTTTTCGAATACAAAAG
ATTCTCTCTGGCGTCCATCAATAACCTAGATAAAGCTTGGGATAAGCGGG
GATGAGGTTGAGAGAAGTCAAAATAGAGATTGAAAGCGAAAGTTAGGTTG
TTTCGTTAAATTCTCAAAAATTCTTTCCAGCTCTCAAAAGATACACTCTC
TTTTATTACGACAGAATATTTTGGTGAGGATGATGGCAGCAGCAAAAAAT
CTAATCAACAGCAAGAACAATCACCCTCAACTGAAACGCACTCGACACCT
AGAACAACCACATCCACCAGCCGTCTAGCGCCATTATACGAACCACCCTC
TGATCACTTGGTATCTCAACGCCCATCGCCCTTAAATTATGCTATACCAA
AGCCACCTGTACATAACCACAAGGAGAAAATAAACAACTTTACTACTCCC
GACATCGATCAAAGGGGTGGGCATGAAACACGTTTACCTGAGTTTCCAAG
AGTGCCAACAAAACAGGTATGTCTATAACTAAGCTGGTTTTCTCGATTTG
TATAAAGCGAGACCAATTTGATTAGATGTTTTACGGACCCGACCGACCCT
GAAATTCCAAAAATCAAAATAAACATTAAATAGGAGATTTTACAGGCGAA
ATTCTACTTTTATTTTTACTTTTTCGCCGACCGACCGACCCTCTTTTTTG
GGTAGCTTGGCCCGTAAAACACTAAATTAAATTGGCATCGTTGTTGGGAC
AAGCCTTTTTAAACTTTAAAGGACATTAATCAACATATCTCCTACCATTA
GCTTATACAGCATTAAAAAAAGAAGGAATATCTTTGTCTCCTTCGTGCGC
CGCGGCAAATCTGCAGGTCTTCGGCCGTTAACGCAGGTCTTCGGCCGCTG
GGAAACCGCGATTTAAAAGTTTTGAATGTTTCGGCTGCTGGCTTAGGTCT
TCGGCCGTTGACGGGAAAAAAATTTGCTGCGCCGCGCGAGCAAAAATTTT
GAGAAATTCCTTTGTTAATTCTTCTTCGTCTGCATAGAAGTGCGCCTCCT
TCTATATCAGAAATAATAATCTTTAACACTCGTGGTTGAATTGTTACCAC
ATTATATACCGGGTGACCCACGAAAAAGTTCGGACGGTTTTCGTTGGCTA
GGGTCTGAAATAAAAGTAATATAAACTCAATCTTTTTTTTAAAAGATAGA
GGATGCTCTAACTTAAACTTTGAGCTATTACTTTTTAAATTTGGTTCAGC
GGTTCTTCATTTGTGGGCTTTTAAAGTCAAAATTCAATTATCGGAAAGTG
CAAAAACACGTCAAAAATGAGGTATAGAATTGTTATTGTTTTCTTATCTT
TAACATTGTGTTTTTCGAGTGTGCTGATGTTTTACGACCTCGTTAATTAG
TGTTGTAGGTAATTAAAGTTTGTAAAATAATAAACTAACAACGTAGTAGA
TTTATATAATATTATTGTACAATGTATACAATGTATAGCAATGTGCCCTC
CCGGTTTTATTGTAAATATTTTTATCAAAACTATTTAGCAAATAGGCAAA
ATTTGCCTTCTTTATGAACATGTCGTGTCTAATGAAAGAACAGAGAATGT
GGGTTTGCCTGGAATATGCTAGAAAGTGTATGGTGGTGGTTCTTTTCTGA
ACGAATAACTTGTTAATACATTTTGTGAAAGTAAAGAATCTAAAAAAAGT
TTTCAAATTGAATAGAAATATCTAACATGCTCTTTTCTAACGATTTAACG
ACCTTGCTTGATTGACTGATAATAAAACAATTTGATACCTCTTTTTTGAC
GTAATTTCGCTCTTTCCGAAAAGTGAATTTTGACTTTAAAAGCTCATAAG
TAGGGAACTTGTGGGTCAAATTTAAAAAGTAATAGCTCAAACTTTAAGTT
AGAATATCTACTTTCTACATATTAAAATTTCAAGCACTTTGAGACATTTG
TTCGGCCTCGAGACGCCGAAAACTGTCCGAACTTTTTCGTGGGTCACCCG
GTACAAGATAAGATTTACATTTATTTTAAATCTTTGAATCTATCTATCTA
AACGTCAGTTACTGTAGCAAGGTCTGATATAGAGCTCACAACACTGTATG
AGCTAGTTTTTTAAAGCCGGCCTGGGGACTGGGTAGCCTATACCAGACGT
CAGCCGCGTTTTTTCTACGCAATGAACGGAATGAAAAATCCCGGTTTTTG
GTGAGGTGTTTGCTAGAGACTGGGGTTAATGAAATCATGAAACCAATGTT
TTGTTTACGGAAGTATATATTTACAATGGCAAATAATAATTAAAAAATCC
AAGGTGAGAAAAAAAATATTACAAAATGTTAAAAAAAAATGGGAAAACAT
CTGCGAAGAAAAAAAATTATTATTGAATTATTAAATTAAATTAAATTATA
TTATTTACAAAATGAAAAATTATTTATATTTTATTTACAAAATGCTAGGT
AAAAAATCACAGAATGTAAAATACGTGAAAATTAAAAAAAAAGAAGAAAT
TATTGATATATGCAACGGTTCAGAGAAATTGATGACCGAAATATTTGGTT
CGATATTCTTCTGCTTGTCCCCTGAAAACGAAAGGAAAGTGAAATTATGT
TATGACTAGAAACTGTATGTATGAGAAATATTTTCCTTTTTGGACCTACC
TCCGGGTACTCCGGTGGAGGTCCTATAAATAATTCGATGTCCGTCCGTTC
GTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTTCTG
ATTTTTGACAGAATGATGCAAAATGGCAATGCCCAAAATGTGACGGAGCC
CGATTTTCGAAAAAAAAATTTTTCCGGAAAAACTGTTTTTTTTGGCATTT
TCTCGAGATTTTATTATTAGTTTTTTCTGATTTTTTGCTCAAAGATGGGT
ATTAACAATACCCAAAACATAGCCGAGTCCGATTTTTGAGAGCCGGAAAT
CGCCGTTTTTCTGGATTTTCATTGGACTTTTTCCTTATAATTGGTTGTTT
TTTCATTCAAAAACATTATTAATAGCAATGCCCACCATCAANNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTATTGATTTTTGAAGCCGGAACTATTTAAAAATCG
CCGGAACAACCTATTTTCGCCGGAAAGACAGTATTTCTTGAATTTCTCGA
GCTGTACTTTATATTTTTTTATCAAATTTTGCACACTGATGCAAAATGAC
AATACCTATGTGACTGATTTTCGAGAAAAAAAAATTATGCCGGAAAAACC
GCTTTTTTCTCGAATTTTCATCCTCAGTTTTTTCTGATTTTTTGCAGAGA
GATGTGTATTCGCAATGCTCAAAACGTGACCGAGTTCGATTTTTGAGAAA
AAAAATTTTCCGGTTGAAAATGCCGGAAATCGCCGTTTTTGCAGATTTTC
GTTGGATTTTTTCCTTATATTTCTATGTTTATCACACAAAAACATTATTG
ATAACAATGCTCACCATCAAGCATGATTCAATTGTCAATAAAACTGATTT
TTGCGAACAGAACTTTCTATTTATTTTTTCCCTACAACCCTTCCCTCACC
CCCCATCAACAATCAATGATGAATTTATTGTGTTGTGCATTTTTTCTAAA
CGCTATATTTTCTGACTGATTTTTTTCATTTTTCTCCTCGCATTGCTATC
TAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTCATTTTT
TCTCTCAAAATTTTGTTAGTTTAGACAACCACCTAGCCTGTTTTTTATAT
TTTGAAAAAAGCTTGCCATTATCTTTTCAGTCAGCGAAGCAGAGTCTGGT
ACAGGCTAATAATCACTACAATCACCGCACTCCTTCTGTTATACAAAGGA
CAATCTTTTTCGTTAAAAAACTGAAAATGTTTTAAGCACCAAGTTCCGTA
AAGTTGATTAGAATGAATAGACGCCAAGAATTTTAAATACTTACATATTT
TGTTTATCTTTTCCATCACGGAGATTTGAGGCTTCGGTAATATCTCCTGG
ACCGTACTCGAAGTAATTTCGTAAAAGGTGGTAAATCCTGAAAAAGAAGT
TTATGAACATCATTAATACACTTGCAAGCTCGGGGCATAACTTTTTGACA
TCAGTCATACTGGAAAAAGAATGACGAAGTATTATTTAAAATCAGGATTT
AAGACTTTATTGTTTTGTCACAGGCCTTTTATGAAGTACAATTGGGTCAT
ATGATAAAATAAGTATACGTTTGACTCTCTTCGATTCTAACTTGAATGGA
AAAGCTAACAGTATTTTGTTTGAAGGGCTTCGAAACTTATTTTCAAAAAT
AAAAGAATTGCTCTTCCGTCAAAGTATCGAAGAATCTTTACTTACTTTGT
GTCTTGTTGAGCATAATTGATTGGAGTTTTACGGAAAAGATCTTCGTAAC
GAGGGTTCATTTGGTGAGCCATCAATAATTGAAAAATATCTTCTCGTTCG
TCCATGACTGCGATATGAGCTGAAGTACTATAAGTTGAAAATGAACAGTT
TAAGACATTGAAATTTCGGATACTTAATTTTCCAATTTTTCAATTTTCCG
TTATTTTACCATCCAAAAACTAAAATCACTTTCTTTTTATGAGTATATCA
ATCTGATGAAAGATCAAACCTCCGCCTGCCTCTCATAAATGAAAAGTGTG
TCATACACAGAAAATTAGATTCAAACAGTACAAGGCAAACAGAAAGAGAA
ACAATCATGTTGCATTCACTTACATTGACATCAACTCCTTGGCATAACAT
GTAATCGATGCATTTTAATGTCACTATCTTTTTATCGTTCATCATGACCA
TGTGTAAAAGGCTCATCTCGCCCAATCGGTTTTCGTTTTCGGTTTCGTTT
TGATTGAATAAAGTTATTTAGAATCAGTTTCTCGTGAAATACTTTCGCCG
AAAAAACTTTCGCGAGGCAAAAAAATTTCATAATTAGAGACCAAGAGGTT
TTGATTTGGCAGTCTTTTTTGAAACCATTCTATTAAGACATTCACAGCCA
TACACTCTACTTACATTAGTTCTAGGAGAGACATCCACGGCCTAGAATGA
AAGAAAAAATATTATTAGGAATGTAAGCTAAAATTCCTTCAAAATTTTGC
CCGAATGGCTACTTTCCCGAAACGAGTTGCTCACAAATATCATTCTAGGA
TGACAATGCAAAATCTTCCTTTAAATTTGATTCCCTTTTCCATAAAACAA
ATTGTTTCCTCAATTCAAATGTCGAAAATGATATTAAGGTCACCCGGTTT
TAATACCAACAGAAAAATACAAATGGAACGTCCGTTCACATACTTTGTAT
AATGGAGTTTTGCCATGAAAGTCTTGCTTGTTGACATCAATACCAGGACA
CATCAATAAGATATTCAAAGTTCTAATGCATCCCCATGAAGCGGCATAGT
GAAGGGCGGTTCTGTATAAAGAAAGAGGAAACCATTTTAAATGGTCTGTG
GATGAAAGACTTATTGGTTAGAATTGCCGCTTTGACTAATGAATTTCTAA
ACGAAGGCTGATAGTTCTATGTTCCTGTTAACTTTTTTGTCAGTGTTGAT
CTCAAAATCATCCTTGCTTTCTTAATAACGCCTTGCCTTTCTTTGTTATC
AACTCTGTTGATCTTTTTCTGAAACTTATCTTCCTTGAGAACCTTTCGTA
GCTTCTTCAGTTTGCCTTTCCAGGCGAATCTAAGGATTAAGAATAAAATG
ATTGGAAATGATCCCGAATGTCTCGTGATATTTTTTGATCATGTACGATT
CCAAAAACACAGGGACAATGATATGAAAATGAAAGCTTGTACTAATTTTT
TAAGGTTTTTCAAATGTCAAAAGACATGCCAGGAGATTCCTCTTGATAAG
CAGTAGGAAAAGTAGAATGTATTTTTTGTCATAGAACTCACCTCATAACT
GCGGATAATTCTTCTTCTTTTACAGTCCAATTGGGATAACTTCCCTCTAA
TATCTTCCGTCGAATACGTGGTTCTTCTACGTAACAGGGAGGTACGCCGT
AATCGTACGCGTTATCGATCAAGAATTGAATATATGCTTCTGCTGTTACG
CGTTGGCTAGCAACTTCGTCAATCAAAGGTGCCTTTAAAACCTCTTGACC
AATCTTGAACAGCAACTCTTCGGCGTTTTCACGTCGTTCTTCCAACGTCA
TTGCGGAAGCTTCGTAACGTCGGTGTTTCGGTACCGGTATGATCGTTCGG
TTTCCGATTAATGGACCACTTTGTTTTTCTCGTTCCACTTTCTTGTTCTC
GTGTTGTCTCCTGAGATTTCCATCAAACCTCTTACTGAGATCAAAGATTT
ATTATACACTGGATAAACGACTCATAAAAATGTGGAGAGCGATCATTGTA
TTTCCATTGTTTCAGAAAACAACTGTCATGGCGGCTCGAAGGTGTCTGAT
TTTTTAAAATATTTATTAGTCTTCTTTTAAAAAAGTTCTCTAGCTCTTTC
TTTTTGTACATTTGCAAAAAAAAACGTTTGAAAGCAAGCTGGATACATTT
GTGAAATCTGGTGTGAGAAAATCATCATTAGACAGGAAATTCAGACAAAA
TGCTTATAGTGACACG

Coding sequence (CDS) from alignment at sc0001983:958..16223-

>TCONS_00038990 ID=TCONS_00038990|Name=TCONS_00038990|organism=Clytia hemisphaerica|type=CDS|length=5238bp|location=Sequence derived from alignment at sc0001983:958..16223- (Clytia hemisphaerica)
TCCAATTGGGATAACTTCCCTCTAATATCTTCCGTCGAATACGTGGTTCT
TCTACGTAACAGGGAGGTACGCCGTAATCGTACGCGTTATCGATCAAGAA
TTGAATATATGCTTCTGCTGTTACGCGTTGGCTAGAATATTTTGGTGAGG
ATGATGGCAGCAGCAAAAAATCTAATCAACAGCAAGAACAATCACCCTCA
ACTGAAACGCACTCGACACCTAGAACAACCACATCCACCAGCCGTCTAGC
GCCATTATACGAACCACCCTCTGATCACTTGGTATCTCAACGCCCATCGC
CCTTAAATTATGCTATACCAAAGCCACCTGTACATAACCACAAGGAGAAA
ATAAACAACTTTACTACTCCCGACATCGATCAAAGGGGTGGGCATGAAAC
ACGTTTACCTGAGTTTCCAAGAGTGCCAACAAAACAGGCATGGTAAAAAG
AAAATGGATAACCGCTCCTTCTTTGGAGGCTTGCTTCATGTCTTTTATGC
ACCTGAGTACGAAAGTGTGGATGATACACGCTGTAAACTGATGGAAAGAA
AAAGATCTGCGCTCAGGAAATGCCAAGATACCGCCACCTTGACGAATACC
CTGTAGAAGAATTTACCGAAGCTTATTGGATAAAGTACAAACGTATACAA
TCTTCAAGGTATACACGATCAATCAAGAATCGAAATATGTGATAGTGGTA
GGTGTTCCAGCTGTGGGTGCAACAAAAGAGCTCTTGCAACAATTTGCTCT
TTATGGAGATATTGAAGAATGGCTTCAACTTCAACCAAAGAGGTTAAGAA
GCACCACAAGAAGTTAAATGTGTGTTATAAAAGACCAGGTTACAGAGAGT
CAAGATGGGAGAAAGCAGTCAAGTCCAATTGGGATAACTTCCCTCTAATA
TCTTCCGTCGAATACGTGGTTCTTCTACGTAACAGGGAGGTACGCCGTAA
TCGTACGCGTTATCGATCAAGAATTGAATATATGCTTCTGCTGTTACGCG
TTGGCTAGAATATTTTGGTGAGGATGATGGCAGCAGCAAAAAATCTAATC
AACAGCAAGAACAATCACCCTCAACTGAAACGCACTCGACACCTAGAACA
ACCACATCCACCAGCCGTCTAGCGCCATTATACGAACCACCCTCTGATCA
CTTGGTATCTCAACGCCCATCGCCCTTAAATTATGCTATACCAAAGCCAC
CTGTACATAACCACAAGGAGAAAATAAACAACTTTACTACTCCCGACATC
GATCAAAGGGGTGGGCATGAAACACGTTTACCTGAGTTTCCAAGAGTGCC
AACAAAACAGGCATGGTAAAAAGAAAATGGATAACCGCTCCTTCTTTGGA
GGCTTGCTTCATGTCTTTTATGCACCTGAGTACGAAAGTGTGGATGATAC
ACGCTGTAAACTGATGGAAAGAAAAAGATCTGCGCTCAGGAAATGCCAAG
ATACCGCCACCTTGACGAATACCCTGTAGAAGAATTTACCGAAGCTTATT
GGATAAAGTACAAACGTATACAATCTTCAAGGTATACACGATCAATCAAG
AATCGAAATATGTGATAGTGGTAGGTGTTCCAGCTGTGGGTGCAACAAAA
GAGCTCTTGCAACAATTTGCTCTTTATGGAGATATTGAAGAATGGCTTCA
ACTTCAACCAAAGAGGTTAAGAAGCACCACAAGAAGTTAAATGTGTGTTA
TAAAAGACCAGGTTACAGAGAGTCAAGATGGGAGAAAGCAGTCAAGTCCA
ATTGGGATAACTTCCCTCTAATATCTTCCGTCGAATACGTGGTTCTTCTA
CGTAACAGGGAGGTACGCCGTAATCGTACGCGTTATCGATCAAGAATTGA
ATATATGCTTCTGCTGTTACGCGTTGGCTAGAATATTTTGGTGAGGATGA
TGGCAGCAGCAAAAAATCTAATCAACAGCAAGAACAATCACCCTCAACTG
AAACGCACTCGACACCTAGAACAACCACATCCACCAGCCGTCTAGCGCCA
TTATACGAACCACCCTCTGATCACTTGGTATCTCAACGCCCATCGCCCTT
AAATTATGCTATACCAAAGCCACCTGTACATAACCACAAGGAGAAAATAA
ACAACTTTACTACTCCCGACATCGATCAAAGGGGTGGGCATGAAACACGT
TTACCTGAGTTTCCAAGAGTGCCAACAAAACAGGCATGGTAAAAAGAAAA
TGGATAACCGCTCCTTCTTTGGAGGCTTGCTTCATGTCTTTTATGCACCT
GAGTACGAAAGTGTGGATGATACACGCTGTAAACTGATGGAAAGAAAAAG
ATCTGCGCTCAGGAAATGCCAAGATACCGCCACCTTGACGAATACCCTGT
AGAAGAATTTACCGAAGCTTATTGGATAAAGTACAAACGTATACAATCTT
CAAGGTATACACGATCAATCAAGAATCGAAATATGTGATAGTGGTAGGTG
TTCCAGCTGTGGGTGCAACAAAAGAGCTCTTGCAACAATTTGCTCTTTAT
GGAGATATTGAAGAATGGCTTCAACTTCAACCAAAGAGGTTAAGAAGCAC
CACAAGAAGTTAAATGTGTGTTATAAAAGACCAGGTTACAGAGAGTCAAG
ATGGGAGAAAGCAGTCAAGTCCAATTGGGATAACTTCCCTCTAATATCTT
CCGTCGAATACGTGGTTCTTCTACGTAACAGGGAGGTACGCCGTAATCGT
ACGCGTTATCGATCAAGAATTGAATATATGCTTCTGCTGTTACGCGTTGG
CTAGAATATTTTGGTGAGGATGATGGCAGCAGCAAAAAATCTAATCAACA
GCAAGAACAATCACCCTCAACTGAAACGCACTCGACACCTAGAACAACCA
CATCCACCAGCCGTCTAGCGCCATTATACGAACCACCCTCTGATCACTTG
GTATCTCAACGCCCATCGCCCTTAAATTATGCTATACCAAAGCCACCTGT
ACATAACCACAAGGAGAAAATAAACAACTTTACTACTCCCGACATCGATC
AAAGGGGTGGGCATGAAACACGTTTACCTGAGTTTCCAAGAGTGCCAACA
AAACAGGCATGGTAAAAAGAAAATGGATAACCGCTCCTTCTTTGGAGGCT
TGCTTCATGTCTTTTATGCACCTGAGTACGAAAGTGTGGATGATACACGC
TGTAAACTGATGGAAAGAAAAAGATCTGCGCTCAGGAAATGCCAAGATAC
CGCCACCTTGACGAATACCCTGTAGAAGAATTTACCGAAGCTTATTGGAT
AAAGTACAAACGTATACAATCTTCAAGGTATACACGATCAATCAAGAATC
GAAATATGTGATAGTGGTAGGTGTTCCAGCTGTGGGTGCAACAAAAGAGC
TCTTGCAACAATTTGCTCTTTATGGAGATATTGAAGAATGGCTTCAACTT
CAACCAAAGAGGTTAAGAAGCACCACAAGAAGTTAAATGTGTGTTATAAA
AGACCAGGTTACAGAGAGTCAAGATGGGAGAAAGCAGTCAAGTCCAATTG
GGATAACTTCCCTCTAATATCTTCCGTCGAATACGTGGTTCTTCTACGTA
ACAGGGAGGTACGCCGTAATCGTACGCGTTATCGATCAAGAATTGAATAT
ATGCTTCTGCTGTTACGCGTTGGCTAGAATATTTTGGTGAGGATGATGGC
AGCAGCAAAAAATCTAATCAACAGCAAGAACAATCACCCTCAACTGAAAC
GCACTCGACACCTAGAACAACCACATCCACCAGCCGTCTAGCGCCATTAT
ACGAACCACCCTCTGATCACTTGGTATCTCAACGCCCATCGCCCTTAAAT
TATGCTATACCAAAGCCACCTGTACATAACCACAAGGAGAAAATAAACAA
CTTTACTACTCCCGACATCGATCAAAGGGGTGGGCATGAAACACGTTTAC
CTGAGTTTCCAAGAGTGCCAACAAAACAGGCATGGTAAAAAGAAAATGGA
TAACCGCTCCTTCTTTGGAGGCTTGCTTCATGTCTTTTATGCACCTGAGT
ACGAAAGTGTGGATGATACACGCTGTAAACTGATGGAAAGAAAAAGATCT
GCGCTCAGGAAATGCCAAGATACCGCCACCTTGACGAATACCCTGTAGAA
GAATTTACCGAAGCTTATTGGATAAAGTACAAACGTATACAATCTTCAAG
GTATACACGATCAATCAAGAATCGAAATATGTGATAGTGGTAGGTGTTCC
AGCTGTGGGTGCAACAAAAGAGCTCTTGCAACAATTTGCTCTTTATGGAG
ATATTGAAGAATGGCTTCAACTTCAACCAAAGAGGTTAAGAAGCACCACA
AGAAGTTAAATGTGTGTTATAAAAGACCAGGTTACAGAGAGTCAAGATGG
GAGAAAGCAGTCAAGTCCAATTGGGATAACTTCCCTCTAATATCTTCCGT
CGAATACGTGGTTCTTCTACGTAACAGGGAGGTACGCCGTAATCGTACGC
GTTATCGATCAAGAATTGAATATATGCTTCTGCTGTTACGCGTTGGCTAG
AATATTTTGGTGAGGATGATGGCAGCAGCAAAAAATCTAATCAACAGCAA
GAACAATCACCCTCAACTGAAACGCACTCGACACCTAGAACAACCACATC
CACCAGCCGTCTAGCGCCATTATACGAACCACCCTCTGATCACTTGGTAT
CTCAACGCCCATCGCCCTTAAATTATGCTATACCAAAGCCACCTGTACAT
AACCACAAGGAGAAAATAAACAACTTTACTACTCCCGACATCGATCAAAG
GGGTGGGCATGAAACACGTTTACCTGAGTTTCCAAGAGTGCCAACAAAAC
AGGCATGGTAAAAAGAAAATGGATAACCGCTCCTTCTTTGGAGGCTTGCT
TCATGTCTTTTATGCACCTGAGTACGAAAGTGTGGATGATACACGCTGTA
AACTGATGGAAAGAAAAAGATCTGCGCTCAGGAAATGCCAAGATACCGCC
ACCTTGACGAATACCCTGTAGAAGAATTTACCGAAGCTTATTGGATAAAG
TACAAACGTATACAATCTTCAAGGTATACACGATCAATCAAGAATCGAAA
TATGTGATAGTGGTAGGTGTTCCAGCTGTGGGTGCAACAAAAGAGCTCTT
GCAACAATTTGCTCTTTATGGAGATATTGAAGAATGGCTTCAACTTCAAC
CAAAGAGGTTAAGAAGCACCACAAGAAGTTAAATGTGTGTTATAAAAGAC
CAGGTTACAGAGAGTCAAGATGGGAGAAAGCAGTCAAG

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_023447	XLOC_023447	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00038990-protein	TCONS_00038990-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0001983	supercontig	sc0001983:958..16223 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
30.4055	27.3158	21.0164	17.4917	8.0536	7.30681	5.16623	6.34036	6.01239	6.02205	6.2689	5.75394	5.02324	4.79306	4.41539	4.87431	6.92884	7.2484	2.82126	2.88986	4.5002	4.18016	12.4637	11.0715	9.5561	8.91713	1.83442	1.95811	6.34212	8.25711

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR034264	RBM48_RRM
IPR000504	RRM_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding

Blast

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BLAST of TCONS_00038990 vs. Swiss-Prot (Human)
Match: RBM48 (RNA-binding protein 48 OS=Homo sapiens GN=RBM48 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 3.721e-45
Identity = 77/126 (61.11%), Postives = 97/126 (76.98%), Query Frame = 2

Query:  137 HHKKLNVCYKRPGYRESRWEKAVKVYTINQESKYVIVVGVPAVGATKELLQQFALYGDIEEYRHLDEYPVEEFTEAYWIKYKRIQSSRHGKKKMDNRSFFGGLLHVFYAPEYESVDDTRCKLMERK 514
            HH +  VC  R  YRE R  +AVKVYTIN ES+Y+++ GVPAVG  KEL+++FALYG IE+Y  LDEYP E+FTE Y IK+  +QS+R  K+KMD +SFFGGLLHV YAPE+E+V++TR KL  RK
Sbjct:   14 HHVQRAVCDTRAKYREGRRPRAVKVYTINLESQYLLIQGVPAVGVMKELVERFALYGAIEQYNALDEYPAEDFTEVYLIKFMNLQSARTAKRKMDEQSFFGGLLHVCYAPEFETVEETRKKLQMRK 139

The following BLAST results are available for this feature:

BLAST of TCONS_00038990 vs. Swiss-Prot (Human)

BLAST of TCONS_00038990 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
RBM48	3.721e-45	61.11	RNA-binding protein 48 OS=Homo sapiens GN=RBM48 PE...	[more]

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TCONS_00038990 (transcript) - C. hemisphaerica