TCONS_00038982 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038982
Unique NameTCONS_00038982
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1484

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038982 ID=TCONS_00038982|Name=TCONS_00038982|organism=Clytia hemisphaerica|type=transcript|length=1484bp
tagaaatagaaatagaaatagaaatagaaaattttatttttggtttCAGA
TATTGAATTAGATGCGGAGGGTGGCTCACATTGTGGAGCGCCACAGGAGG
TGCGAAGGTCCATCTCATTGAATTTGACCAAGAAGACGAAGTTGAGGACT
AAATCAACATCAAGCAAAACCAGTAAATCTTCACGAAGAGATAGGAAATC
AGAGAGAGAAGGAGATGATGGGAGTGAGAAAGGTTTTCGAAGAGGCATCA
AaacttcatcttcttcttcgagttacgacaaaaagaaagaaataacgACA
GACGAAGACGACAGAGAGGATGAAGAACTTGATTGGTCGCACACCGTGAT
GTTTATAGGAGATAAAGTTCAAGACCCTATGATTCACATGTGTGAAAAAT
GTTCATTACCAATCCTCATCTATGGACGTCTGAACCCATGTAAACACGTG
TTCTGTTTGTCTTGTGCTGAAATATCCAATGGAGTATGTCCTAGGTGTGA
TGACAGAGTGGACCGAATCGAACCCGCCGGAATCGGACAAATCTTCGTCT
GTTCGTACGGTGGTAGTCGTAACGGCACGTCGGGATGTCGGCGGAGTTAT
CTCTCCCAACGTGATCTTATTGCTCACATTAAGCATCGTCATGAAAAAGA
AGGCTCAAACTTACCTGAGGCTGAGCTCATCCGTCAACAAGGAGCGGCCG
CTTTACGAATGCCGTATTTCGCTAACGCGCAAGCTGTGACAGGCGGGAGC
AGTGCACCAGGTAGCAACCTAATCATCAATCCTATTCCTACATCGAATCC
AGCGGCAGTGAGTGGAATTCAAAACACCATGGTCATACAGCCGGGTTCTC
AACAAATTTATGTAGATCCGAATCGGTTGTCATTGCTTCAGACGGCCACC
GGTGCACAAGTCCAAATACAACAAATCCCACAAGGAATGACGATTGCAAC
CGCCACCGCCCAACAACCCTACACACAGGGCGGAGCTTCAGCCGCCACAG
CCGCTTTTCTTGCAGCATCTCAGCCTCAACAACAATACGCACCTCAACAA
ATACCGTCTACAGGCGGACCGCCTTCAAATAACACCCCTGGACGTCAACC
GCCCGGTGACCCTAGACTGAATCCTAACCAGCAAATGAACATTCATGGCA
CCCAACAAAACGATTGGCGGAATCAAACGCAGAGCAGTGATTGGTCATCT
CGCTCGTCCAGTCAACAATCTttctacaaataaaaagaatcaaaggTGTA
CGAGATAAACGAAACATGACCCCGTTTCTTGCATGAACTGATGAACCTGG
ATTCTTGCTGTTCGAAATCTCTTTTGATGGACTAGAACGCGTTCTTAATT
CTACCAAGAAAAGCAGTTGTGATATCAGCAGTGATCTGCTATCAGATAAA
ATCAAgtgtttttcctcaaaaatgaGTGTGCATTAGTGTCTCAACGCACT
TCAATTCTCGGATATTATTCAATTGTTAGATGNN
Run BLAST on NCBI

protein sequence of TCONS_00038982-protein

>TCONS_00038982-protein ID=TCONS_00038982-protein|Name=TCONS_00038982-protein|organism=Clytia hemisphaerica|type=polypeptide|length=294bp
MFIGDKVQDPMIHMCEKCSLPILIYGRLNPCKHVFCLSCAEISNGVCPRC
DDRVDRIEPAGIGQIFVCSYGGSRNGTSGCRRSYLSQRDLIAHIKHRHEK
EGSNLPEAELIRQQGAAALRMPYFANAQAVTGGSSAPGSNLIINPIPTSN
PAAVSGIQNTMVIQPGSQQIYVDPNRLSLLQTATGAQVQIQQIPQGMTIA
TATAQQPYTQGGASAATAAFLAASQPQQQYAPQQIPSTGGPPSNNTPGRQ
PPGDPRLNPNQQMNIHGTQQNDWRNQTQSSDWSSRSSSQQSFYK
Run BLAST on NCBI

transcript from alignment at sc0001981:30074..33181-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038982 ID=TCONS_00038982|Name=TCONS_00038982|organism=Clytia hemisphaerica|type=transcript|length=3108bp|location=Sequence derived from alignment at sc0001981:30074..33181- (Clytia hemisphaerica)
TAGAAATAGAAATAGAAATAGAAATAGAAAATTTTATTTTTGGTTTCAGA
TATTGAATTAGATGCGGAGGGTGGCTCACATTGTGGAGCGCCACAGGAGG
TGCGAAGGTCCATCTCATTGAATTTGACCAAGAAGACGAAGTTGAGGACT
AAATCAACATCAAGCAAAACCAGTAAATCTTCACGAAGAGATAGGAAATC
AGAGAGAGAAGGAGATGGTATTTAAATAATTGCATCTTTTCAAAACTAGA
TTAATAACACCTAAGTTTTTTCCATTTATCCAACCCTGGGTCCAGAATTT
GTCCCGTCCAAAATCATTACACATTACTCCCATTGTAAGAGTTTCTATTT
TAGATTATTGTTTATATTAGGTCCCAATGCATTTGTGATTGGAAGTGTCA
CTGAACAATGGCTGAATATTGTAATCTAGGATAGAGCATAGAGTTGTTTT
AAGATCTCTTGCATCTACATAGTCACACAGTTTTAGTTTATTTTAATTTA
AAAACAAACCACTTTGCATTGTCAAAATCTAGTTTGCTTGAAGCATCTTT
GATTATGCTAATACAGTATGAAATGTTCTTTGAAATGATATAGACTATGA
ATTTGAAGAGACTTAAAGTGTTCATACATTATTTTTAGATGGGAGTGAGA
AAGGTTTTCGAAGAGGCATCAAAACTTCATCTTCTTCTTCGAGTTACGAC
AAAAAGAAAGAAATAACGACAGACGAAGACGACAGAGAGGATGAAGAACT
TGATTGGTCGCACACCGTATGTTTTTTACTTTTCTCTGGTAGGGATGAGA
CAAAGATTATTGACTCTTTTTTGTCACTTTTTATATTATTTATAGGATTG
CATGCTGGCTTTTACGGTAAATCTTTGTCTGTTTTGGAAGTTTTTAGTTT
GTTGAAGTTTGTTGAAGTTTGGTTTAATGAATTTCTTTCTAATAAAAGGT
TTTTATTTGGACGCAGCCTCGTCCAATATCTTTTCTCGCATGCCCAATAT
TTTTATATATTGGATTCGACTTTGTCCAATAACTGCTTAATATTTTCGGT
AGAAAATTACTTTAGGGTTTAACTCGTATATACAGGTCGCAAAATCCAAG
ACTAATAAGAAAAATTGCTCAAAACACAGCAGTTTATCTGAATAAGAAAA
GGTGAGGAATAGCTCTTTCTCTCACAATGTTTTATACATTATAGGTGATG
TTTATAGGAGATAAAGTTCAAGACCCTATGATTCACATGTGTGAAAAATG
TTCATTACCAATCCTCATCTATGGACGTCTGGTAAGTAAACAGGGTATGA
ACTCGTGAACTTTTTTATATTAATTTCCCTTATTTTGATCCAATTCGAAA
AGACGAAATAAATTAAATTTTCCATTGAAGTTCCTTGTTTTAAGTTCAGC
TTTGATTCATTCCTGTGAATTTAACTGGCGAAAAATTGCATGCTACCATC
GAATTCCCTTTACCTTTTATTATTTATTGCAAAACTAAAACTTTCACTGT
TTCTTTCTTAGAACCCATGTAAACACGTGTTCTGTTTGTCTTGTGCTGAA
ATATCCAATGGAGTATGTCCTAGGTAAGACTTTCTCTCTAAGCAAAGAAA
AGGGCAGTTAAAACGTCTATTAGATATATAAATTTTGTCAATTATTTCGA
AAATAAAGGAGATGACTTTCTTTCAATTCTTATCTCTCAGGTGTGATGAC
AGAGTGGACCGAATCGAACCCGCCGGAATCGGACAAATCTTCGTCTGTTC
GTACGGTGGTAGTCGTAACGGCACGTCGGGATGTCGGCGGAGTTATCTCT
CCCAACGTGATCTTATTGCTCACATTAAGCATCGTCATGAAAAAGAAGGC
TCAAACTTACCTGAGGCTGAGCTCATCCGTCAACAAGGAGCGGCCGCTTT
ACGAATGCCGTATTTCGCTAACGCGCAAGCTGTGACAGGCGGGAGCAGTG
CACCAGGTAGCAACCTAATCATCAATCCTATTCCTACATCGAATCCAGCG
GCAGTGAGTGGAATTCAAAACACCATGGTCATACAGCCGGGTTCTCAACA
AATTTATGTAGATCCGAATCGGTTGTCATTGCTTCAGACGGCCACCGGTG
CACAAGTCCAAATACAACAAATCCCACAAGGTAACACTTCTACTTTAAAT
TTTAGCGGGAATTTAATTTGCTGGTTGAAGGATATCTTTGGCCAAAAAGT
CGTTATTAATTAAGCAAAAAATAAGTTTTTAACACCCCGCTAGATCCGCG
GGGATTCCTTTCCTCCCTAATTTCTTCCTTTAAAGGTAAAATATTGACCC
ATCCAAATGCGGTCTTCCAATCGGCTTCGTCTTGAAACAGAAGTAATAGT
CCTTTTTTCCATAACGCCTGAGTAGCCCAATTTTCAGATTTTCGTGCACG
TGAAAAAAAGCTTTAAGACCCTATTAGTCAATAAAAACTCACCTGTCGGT
CACTAACAGTTATTGGGACTCAACTTTTACTTTTACGTAAATAATTAGAG
TAACCAAACAGTTATTCTAAAAATATAGAGTTTGTAAAATAATTTTGTCA
TCTTTTAGGAATGACGATTGCAACCGCCACCGCCCAACAACCCTACACAC
AGGGCGGAGCTTCAGCCGCCACAGCCGCTTTTCTTGCAGCATCTCAGCCT
CAACAACAATACGCACCTCAACAAATACCGTCTACAGGCGGACCGCCTTC
AAATAACACCCCTGGACGTCAACCGCCCGGTGACCCTAGACTGAATCCTA
ACCAGCAAATGAACATTCATGGCACCCAACAAAACGATTGGCGGAATCAA
ACGCAGAGCAGTGATTGGTCATCTCGCTCGTCCAGTCAACAATCTTTCTA
CAAATAAAAAGAATCAAAGGTGTACGAGATAAACGAAACATGACCCCGTT
TCTTGCATGAACTGATGAACCTGGATTCTTGCTGTTCGAAATCTCTTTTG
ATGGACTAGAACGCGTTCTTAATTCTACCAAGAAAAGCAGTTGTGATATC
AGCAGTGATCTGCTATCAGATAAAATCAAGTGTTTTTCCTCAAAAATGAG
TGTGCATTAGTGTCTCAACGCACTTCAATTCTCGGATATTATTCAATTGT
TAGATGNN

Coding sequence (CDS) from alignment at sc0001981:30074..33181-

>TCONS_00038982 ID=TCONS_00038982|Name=TCONS_00038982|organism=Clytia hemisphaerica|type=CDS|length=3540bp|location=Sequence derived from alignment at sc0001981:30074..33181- (Clytia hemisphaerica)
GAATGACGATTGCAACCGCCACCGCCCAACAACCCTACACACAGGGCGGA
GCTTCAGCCGCCACAGCCGCTTTTCTTGCAGCATCTCAGCCTCAACAACA
ATACGCACCTCAACAAATACCGTCTACAGGCGGACCGCCTTCAAATAACA
CCCCTGGACGTCAACCGCCCGGTGACCCTAGACTGAATCCTAACCAGCAA
ATGAACATTCATGGCACCCAACAAAACGATTGGCGGAATCAAACGCAGAG
CAGTGATTGGTCATCTCGCTCGTCCAGTCAACAATCTTTCTACAAATAAG
TGTGATGACAGAGTGGACCGAATCGAACCCGCCGGAATCGGACAAATCTT
CGTCTGTTCGTACGGTGGTAGTCGTAACGGCACGTCGGGATGTCGGCGGA
GTTATCTCTCCCAACGTGATCTTATTGCTCACATTAAGCATCGTCATGAA
AAAGAAGGCTCAAACTTACCTGAGGCTGAGCTCATCCGTCAACAAGGAGC
GGCCGCTTTACGAATGCCGTATTTCGCTAACGCGCAAGCTGTGACAGGCG
GGAGCAGTGCACCAGGTAGCAACCTAATCATCAATCCTATTCCTACATCG
AATCCAGCGGCAGTGAGTGGAATTCAAAACACCATGGTCATACAGCCGGG
TTCTCAACAAATTTATGTAGATCCGAATCGGTTGTCATTGCTTCAGACGG
CCACCGGTGCACAAGTCCAAATACAACAAATCCCACAAGAACCCATGTAA
ACACGTGTTCTGTTTGTCTTGTGCTGAAATATCCAATGGAGTATGTCCTA
GATGTTTATAGGAGATAAAGTTCAAGACCCTATGATTCACATGTGTGAAA
AATGTTCATTACCAATCCTCATCTATGGACGTCTGGAATGACGATTGCAA
CCGCCACCGCCCAACAACCCTACACACAGGGCGGAGCTTCAGCCGCCACA
GCCGCTTTTCTTGCAGCATCTCAGCCTCAACAACAATACGCACCTCAACA
AATACCGTCTACAGGCGGACCGCCTTCAAATAACACCCCTGGACGTCAAC
CGCCCGGTGACCCTAGACTGAATCCTAACCAGCAAATGAACATTCATGGC
ACCCAACAAAACGATTGGCGGAATCAAACGCAGAGCAGTGATTGGTCATC
TCGCTCGTCCAGTCAACAATCTTTCTACAAATAAGTGTGATGACAGAGTG
GACCGAATCGAACCCGCCGGAATCGGACAAATCTTCGTCTGTTCGTACGG
TGGTAGTCGTAACGGCACGTCGGGATGTCGGCGGAGTTATCTCTCCCAAC
GTGATCTTATTGCTCACATTAAGCATCGTCATGAAAAAGAAGGCTCAAAC
TTACCTGAGGCTGAGCTCATCCGTCAACAAGGAGCGGCCGCTTTACGAAT
GCCGTATTTCGCTAACGCGCAAGCTGTGACAGGCGGGAGCAGTGCACCAG
GTAGCAACCTAATCATCAATCCTATTCCTACATCGAATCCAGCGGCAGTG
AGTGGAATTCAAAACACCATGGTCATACAGCCGGGTTCTCAACAAATTTA
TGTAGATCCGAATCGGTTGTCATTGCTTCAGACGGCCACCGGTGCACAAG
TCCAAATACAACAAATCCCACAAGAACCCATGTAAACACGTGTTCTGTTT
GTCTTGTGCTGAAATATCCAATGGAGTATGTCCTAGATGTTTATAGGAGA
TAAAGTTCAAGACCCTATGATTCACATGTGTGAAAAATGTTCATTACCAA
TCCTCATCTATGGACGTCTGGAATGACGATTGCAACCGCCACCGCCCAAC
AACCCTACACACAGGGCGGAGCTTCAGCCGCCACAGCCGCTTTTCTTGCA
GCATCTCAGCCTCAACAACAATACGCACCTCAACAAATACCGTCTACAGG
CGGACCGCCTTCAAATAACACCCCTGGACGTCAACCGCCCGGTGACCCTA
GACTGAATCCTAACCAGCAAATGAACATTCATGGCACCCAACAAAACGAT
TGGCGGAATCAAACGCAGAGCAGTGATTGGTCATCTCGCTCGTCCAGTCA
ACAATCTTTCTACAAATAAGTGTGATGACAGAGTGGACCGAATCGAACCC
GCCGGAATCGGACAAATCTTCGTCTGTTCGTACGGTGGTAGTCGTAACGG
CACGTCGGGATGTCGGCGGAGTTATCTCTCCCAACGTGATCTTATTGCTC
ACATTAAGCATCGTCATGAAAAAGAAGGCTCAAACTTACCTGAGGCTGAG
CTCATCCGTCAACAAGGAGCGGCCGCTTTACGAATGCCGTATTTCGCTAA
CGCGCAAGCTGTGACAGGCGGGAGCAGTGCACCAGGTAGCAACCTAATCA
TCAATCCTATTCCTACATCGAATCCAGCGGCAGTGAGTGGAATTCAAAAC
ACCATGGTCATACAGCCGGGTTCTCAACAAATTTATGTAGATCCGAATCG
GTTGTCATTGCTTCAGACGGCCACCGGTGCACAAGTCCAAATACAACAAA
TCCCACAAGAACCCATGTAAACACGTGTTCTGTTTGTCTTGTGCTGAAAT
ATCCAATGGAGTATGTCCTAGATGTTTATAGGAGATAAAGTTCAAGACCC
TATGATTCACATGTGTGAAAAATGTTCATTACCAATCCTCATCTATGGAC
GTCTGGAATGACGATTGCAACCGCCACCGCCCAACAACCCTACACACAGG
GCGGAGCTTCAGCCGCCACAGCCGCTTTTCTTGCAGCATCTCAGCCTCAA
CAACAATACGCACCTCAACAAATACCGTCTACAGGCGGACCGCCTTCAAA
TAACACCCCTGGACGTCAACCGCCCGGTGACCCTAGACTGAATCCTAACC
AGCAAATGAACATTCATGGCACCCAACAAAACGATTGGCGGAATCAAACG
CAGAGCAGTGATTGGTCATCTCGCTCGTCCAGTCAACAATCTTTCTACAA
ATAAGTGTGATGACAGAGTGGACCGAATCGAACCCGCCGGAATCGGACAA
ATCTTCGTCTGTTCGTACGGTGGTAGTCGTAACGGCACGTCGGGATGTCG
GCGGAGTTATCTCTCCCAACGTGATCTTATTGCTCACATTAAGCATCGTC
ATGAAAAAGAAGGCTCAAACTTACCTGAGGCTGAGCTCATCCGTCAACAA
GGAGCGGCCGCTTTACGAATGCCGTATTTCGCTAACGCGCAAGCTGTGAC
AGGCGGGAGCAGTGCACCAGGTAGCAACCTAATCATCAATCCTATTCCTA
CATCGAATCCAGCGGCAGTGAGTGGAATTCAAAACACCATGGTCATACAG
CCGGGTTCTCAACAAATTTATGTAGATCCGAATCGGTTGTCATTGCTTCA
GACGGCCACCGGTGCACAAGTCCAAATACAACAAATCCCACAAGAACCCA
TGTAAACACGTGTTCTGTTTGTCTTGTGCTGAAATATCCAATGGAGTATG
TCCTAGATGTTTATAGGAGATAAAGTTCAAGACCCTATGATTCACATGTG
TGAAAAATGTTCATTACCAATCCTCATCTATGGACGTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023439XLOC_023439Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038982-exon-sc0001981-1575043694:32965..33181TCONS_00038982-exon-sc0001981-1575043694:32965..33181Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1575043694:32416..32543TCONS_00038982-exon-sc0001981-1575043694:32416..32543Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1575043694:31901..31987TCONS_00038982-exon-sc0001981-1575043694:31901..31987Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1575043694:31609..31670TCONS_00038982-exon-sc0001981-1575043694:31609..31670Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1575043694:31052..31491TCONS_00038982-exon-sc0001981-1575043694:31052..31491Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1575043694:30074..30623TCONS_00038982-exon-sc0001981-1575043694:30074..30623Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1510915933:32965..33181TCONS_00038982-exon-sc0001981-1510915933:32965..33181Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1510915933:32416..32543TCONS_00038982-exon-sc0001981-1510915933:32416..32543Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1510915933:31901..31987TCONS_00038982-exon-sc0001981-1510915933:31901..31987Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1510915933:31609..31670TCONS_00038982-exon-sc0001981-1510915933:31609..31670Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1510915933:31052..31491TCONS_00038982-exon-sc0001981-1510915933:31052..31491Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1510915933:30074..30623TCONS_00038982-exon-sc0001981-1510915933:30074..30623Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1491911889:32965..33181TCONS_00038982-exon-sc0001981-1491911889:32965..33181Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1491911889:32416..32543TCONS_00038982-exon-sc0001981-1491911889:32416..32543Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1491911889:31901..31987TCONS_00038982-exon-sc0001981-1491911889:31901..31987Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1491911889:31609..31670TCONS_00038982-exon-sc0001981-1491911889:31609..31670Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1491911889:31052..31491TCONS_00038982-exon-sc0001981-1491911889:31052..31491Clytia hemisphaericaexon
TCONS_00038982-exon-sc0001981-1491911889:30074..30623TCONS_00038982-exon-sc0001981-1491911889:30074..30623Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038982-proteinTCONS_00038982-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001981supercontigsc0001981:30074..33181 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
58.8513	60.0756	43.4148	41.5191	66.681	57.0215	54.0907	57.3039	46.615	45.8029	43.1606	35.7292	36.7899	41.1856	34.6659	38.3549	46.8532	43.5697	25.1128	25.8454	40.678	37.9898	60.4269	51.2531	38.3598	40.4743	26.2503	27.0785	34.5596	37.7595
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS
IPR001841Znf_RING
Blast
[Close]
BLAST of TCONS_00038982 vs. Swiss-Prot (Human)
Match: HAKAI (E3 ubiquitin-protein ligase Hakai OS=Homo sapiens GN=CBLL1 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 1.192e-26
Identity = 56/121 (46.28%), Postives = 71/121 (58.68%), Query Frame = 1 
Query:  328 LDWSHTVMFIGDKVQDPMIHMCEKCSLPILIYGRLNPCKHVFCLSCAEIS----NGVCPRCDDRVDRIEPAGIGQIFVCSYGGSRNGTSGCRRSYLSQRDLIAHIKHRHEKEGSNLPEAEL 678
            L W   +  +G+K   P +H C+KC LPI IYGR+ PCKHVFC  CA +     + +CP C D V RIE    G +F+CS         GC+R+YLSQRDL AHI HRH + G  +  A L
Sbjct:   89 LFWDFQINILGEKDDTP-VHFCDKCGLPIKIYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSI------VQGCKRTYLSQRDLQAHINHRHMRAGKPVTRASL 202
The following BLAST results are available for this feature:
BLAST of TCONS_00038982 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HAKAI1.192e-2646.28E3 ubiquitin-protein ligase Hakai OS=Homo sapiens ... [more]
back to top