TCONS_00038865 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038865
Unique NameTCONS_00038865
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length218

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038865 ID=TCONS_00038865|Name=TCONS_00038865|organism=Clytia hemisphaerica|type=transcript|length=218bp
ATTAAACTGACATTTTCAATCACAATGTAATGAATATTCATACAcagtaa
aaatattattttatcaatttCCTACATTATACGAATTAAATAATGTGTGT
TTAGAGCTCTTCAATAACGATACGTGTCACTTGATTCCATCCTGTGTAAA
CATCACCAAGCGAATCAAAACCTGAACATTTCCCAACGTTGAATCCAACA
CTCACAACACCTGATTNT
Run BLAST on NCBI

transcript from alignment at sc0001950:4525..25909+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038865 ID=TCONS_00038865|Name=TCONS_00038865|organism=Clytia hemisphaerica|type=transcript|length=21385bp|location=Sequence derived from alignment at sc0001950:4525..25909+ (Clytia hemisphaerica)
ATTAAACTGACATTTTCAATCACAATGTAATGAATATTCATACAcagtaa aaatattattttatcaatttCCTACATTGTACATTATACCTCTCTAATTT AAGAAATTGAATTAAATAATTTGTGTTTAGAGCTCTTCAATAACGATACG TGTCACTTGATTCCATCCTGTGTAAGCATCACCAAGCGGTTGACCTGAAC ATTTCCCAACGTTGAATCCAACACTCACAACGCCTGATTTGTCGATTTTA CAAACACCTTTCATTGTGAACGGGATGTGATCACCATTCGCAGTGCTTCT GTAATACGAATGGTCTATTGGGTAAGGAGAACATTCTTTTCCATCAAAGG TGACAAACCATCGACTGCATGTGTGagcatttttttgataaatatttgaA GAGATTGACACCATTAAGTATGAGTTGGTCTTTGATTTTGTGAACTTGCA ATCCTGTTCATTTGAAAGATTAAATAAAAAGTCATACAGTAAATATCCCA TTTAAAAACAtacattgttaaccggttactttttcgaagcgggctacacg gctttttgcgcaatgcaattggttcttttcacatgacgacgggcctacat tgtccagagttgcccgtcgttaggaaaattcattgttacgtcactttttc aaaggaaaatgaacaatgtgttgacatcatttctctcattttttatttct gacgtcagaaattataacaatttttatctcttttcgctggTATTTTTCAC tgtatttcgctatttttcctggataaaacgctaaaaatcaatcgaagctg aaggaaacggttaacaaatacaataatgtttttttcgggctgtactgaaa atattgccctcggtcaacgcaacaacctcgcaagctcggtcgttacttga cctcgagcaatatttctcagtacagccctcactaaccggtcattattgta ttaataatTTCTTTCGGAATAattattcttcttttttgatcccatgttgt gcgcagatatgtaatttttgcgcagatatgtaatttctgcgcaaatatgt tattattttgcgcaggtatgtaatttctgcgcaaatatgtaattattttg cgcaactatgtaattttgagctgcgcagatatgtaattaaatttctgcgc agatatgtaaaacacgatcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNtaaaaaaattaaatgtctttcttattttccccttacaaattaaac taaggcaaaatatttgactttaagccatctaaaaggagacgaatttaatt tttttttttaaatggaatTGGCATTCACAATGACACAATGGCTCTATCGA AAGAAATAGGGAATTTTGCTAAATCTAACATTAGTTTattagaattttat aagaacaaggttTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgcttataagaa aaacaaaattttctagcttaagcactatcctatgtttgctttgaaagaac cgatcaccgaaagctaatatctattggtttgaGAGTTAtaaattgtgttc ttataaagttgatgcttataaaaaaaaaaaaaattctagcttaagcacaa tcctatataagctttgaaaaaaccaaacgccgaaagctaataatcattgg tttaggagttatgaattgtgttcttataaagttgatgcttataagaaaaa caaaattttctagcttaagccctatcctatgtttgctttgaaagaaccga tcaccgaaagctaatatctattggtttgaGAGTTAtaaattgtgttctta taaagttgatgcttataaaaaaaaaaaaattctagcttaagcacaatcct atataagctttgaaaaaaccaaacgccgaaagctaataatcattggttta ggagttatgaattgtgttcttataaagctaatgcttataagaaaaataaa tttttctagcttaagcacaatcctatatttgctttgaaaaagccaaacgc cgaaagctaataatcattggtttaagagttactaattgtgttcttataaa gttgatgcttacaagaaaaataaaaatttcctcaTTAGCACAGTCCCCTA GTTGCTTTGATAgaaccaaacgccgaaagccaatatcactttgataaaaa gatattgacttgtttcttataaagatgatgcttataataaaaacaacaat cgcCAAAAGTTTGCCTTAGTCCAAGAACAATGTTCaagatattacttctt gtatatgaaaaattaatgttaaaatcgagtcagtttttcaaaaaataagt aaGTCCAAAagatcgtgttttacatatctgcgcagaaatttaattacata tctgcgcagctcaaaattacatagttgcgcaaaataattacatatttgcg cagaaattatatatctgcgcaaaataattacatatctgcgcagaaattac atatctgcgcataacATCCCACTATAATAATATGGTTAAGGGCcttgacc atagtgaatttttaatatttgccacgcAGAAAATATAAATTCATACTTGA TGTAGTCcgcaaaactgtggcatgttatacattttcttttaGGCCAATGA TCcttgagtttgaaaattgaagaagtgcaatgaaaaaatttgatgaagaa gaaaatgaaaacttttgcaaagaagagtatttcaattttgaacaGCTTAT TGtcagcgaaaaaaaaaaaaacattttgaaaattgttttgcaGTAGAtga tgtatcttttaccgaactaaaatgagatttttggaaaatttgtctAAAAG CTTATTCGTCCTAAATctttgaaaatagtgctttttgaccaatttttcat cccaatttttcatagaaaaacatctataacttttgatgcattaatttaga aaaatttcctgaaaaagtAAATACATTTCAATACTTTGTGGACAGTTTGa gaaaacttcgaaacaaaacgGTTAATTACTTAtcaaaacttagcactttt tacaaaagagggtaatgcaacatattattaaacCTCTTTAGAGTTCATGG CGTCTTTTTTTCAATTAGATTCTTAaatactcttaagggatttgattaaa aagcaatttagaaaggcaattatttgttaaaagtgttaaagaacctaaaa cataactttcatgttcaaaaactaaaatctattttttgacTGTGGGTACC ACGATTTGCGAAAGTCTATTCTCGTTTAAACTTAGACAATCCTGTCATTT ACACAGGGCTCAACTCTTTTGCCGTAAACCGCTGTAATGAGTGTTAACTG CACGCATGCATTCCCTGTGTTTAATATCCTTCTAACGGTATCGATAGCAT TGTATAATTTAGTCGTTTACTTTGTCAGGCTATTTACATAAGaaagattt attatttttaagtGTTTTGATATCTGATCAAgaactttttttgcttataa atgCTTTACATGTGacagaaattaaagaaaatttttactaaCCTTTTCCA GGGGGGCCTTGCTCCCCCTTTGTTCCATTTATCCCAGGAACTCCATTGAT ACCGTCTTTGCCATCTTataatgaaatttatttgattacTTTCAGTATAA CGGAATCCTCTATGTGTTATAAAAAGAGTACGAATAAGTCAAAAAGATAT CCTCTAATATGTTTTAATAACGTATGTAAAATTCCCGTTCGATAGTTTGC CCCCCCCACCCCGTTTTTGAGtttgggaccattcaaaaagtacgtacatA TCCAATCATATCCGAGAGGATGCGCGCACCTTACTTTTTAATGatctctt taaaattaattacaTACATATATTCTTTTGCACTTGAATCTTTTACATTT ACCTTTTCCTGGAACACCTTGGTCTCCCTTCGTTCCATTTGATCCAGGAC GGCCTTGTANCTTTTTGCTAATTCCTTTAAATCAATTACATACGTTTGCT CTGATTTTGCACTCAAATCATTTTTATTCTAAAGCTGCTTATTTTTCTCG TTCTTTTTTCAAGCTCTATTTTTTATGATTACCGCTTAACACTAAGACCA ATAGAATatgaatcaatttttttatatttacctTTTCCTGGAACACCTTG GTCTCCCTTGGTTCCATTTGACCCAGGACGCCCTTGTATACCTTTAACAC CTTCTGGCCCTCTGGCACCTGGTAGTCCGTCTCTGCCGTCTTGTCCCTGG CATCCATCTTCCCCATCTCGTCCAGGTAGCCAGTTCAAGCCATCACGACC GTCTCAACCCACTCGACAAGGCTTACAAGTGGAAGGGGACGATTGAGCGA GGGTTTTCTAATGAAAAAGAATAGAAGATTGCTAGGAAAGATTGATATGT CCATCGACCATATGTCTTGTAGCAAAAAGTTTTTAGACCCaatagaaata tatttttctcctTTTGATGATCATCTATTGATATTTTGCGGATGTGGCAA CAGTTGGATGCGGGTATGAAAGTCATTAAAGTTTAGTGTATGTGTATGTC CGGTACAGAGCAGGCGACATACAAGTCTTCGAAAACAATTTCGAAGTAAt tcattcaaaagattttcCTTAAAGAATGATATtaggcgggaatttaattt agcggattGCCGAAAAGTTTAATCAGAGGGAATAAATTCAATTTGgcaaa tatttgcaaaaattaatttcccgttgcagaatatttttggaaaaaaactt ttatcaaataagCAAAATGATGAAATGACAGGACACGAATTAggaaaata cataaaataaaTTGATTTGGCGGGAAAATTCCATGAAATcagtcaaattt tctttccgcctaAATTTCATCCTTTGTCTAATGTAACATCGAATGCCTTT CCGTGCCGCTGTCGACATGTGCCGACAAGAgcatattttcgattttttaa ccAGGTCTCGAgtttttttatagtttattGATTGTTCGATTTTGAACTAG ATTTcatcatggaggtaataaagatatagatggagagaaaacgtctcggt aatgatctaaatggtcgttgaaatcttttataaatctattcaaagcggct tttctttgaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNggttttcatactctgacaaaatgatcgatacaaggttcctaatcgta acaattaatttttttttaaatctatcgatggctttatgggtagcttcccc tagaagttgtgcttattatgtgaagtttttttcaatttttcatgacaaga ctattatatttcaagatacttgttaaaaatgtaatgtcttttcattcatc ttaaatattcccacgagtatacccaaaattaatcatcttattcccaaagc aaccaaacagctgtttgcttacgatgataaatcagaatagaacaaaaggc attgactctccatctatatttttattacctccatgattTCATTAATTAGa actgttgaataattaaaatatatctcaaaaatgtttttcataattataca tTTCTCAACTCAAAGTCAACACATATCACttatatttctgatatttttca gaaaataaagttAAATGCGATGGTTAACTCTGTGGTCGCTCATGTCAGGA TGtgccgacatctggcaaataggttGAACCCTTAAAAATACGAACGGCAG TTAAATACCGTGACAAGCACAGGCCGAAAGCTTATATCGACCTGTGCTGA CCAATCCTGATTCTATTCAAGAAAAGTACCCAtaacgaccatccaagatc tttgatgaagttcaaagttgatatttttattcccatcattgaaaacacaa ctcaaaaatatcatcaatgcttttcaaaaagagtcagtgatagagaatca taacataggctgcgtttagaccagcctggcatttgtaattgcttgcagta ttcttttgaattctattgttccgcgtaATTGTTcagtttgtcaaatgcct aatgatgccagcgtgtatcagtatgcagtttactatttacgaattcccca gaaacctatccaagtgtaattgaaatgagtttctttcaagagaatttttt acatgatccccaaatgtataacaagtaATTACTAAACCTTTAAATATGGA TTGTccctttaattgaatcgaaataatagacagactttatggctgcgttt agaccaactggcatttgtaatttggcatttgctcatgagggattcgattt taatagcttttccattgtattttctgtcatggcatttaNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaaacttttt gccgtagggctaggctatggcaaatcttgcaaattttacaatctatagaa agaactgaataaaaaacgtgcaaatactttaaaaaaatcaaaaatgtcat ttttctctttgttttggttcctttgtttgatttgaaatgccagaaaaggg gattcctttgctcaaaatggcatttcgaatgccaacgaaatgccaacacg ctggcatcattaggcatttgacaaaccgaacaattgcgcggaaaaataga attcaaaacaatactgcaagcaattacaaatgccaggctggtctaaacgc agccagtgattagattgacacatgcgcgataaaatttctattattggtct tcagaggttaaaaTATTGTccacctctgatactcagggtatgaAATCCTA ACTTTCTAACAGagactcaaaatgaaaatcagaaCAATGGACAATCTCAT ATAACATCAANtttctttattaacAGCAGATTTTGATGCATATGTTTCGA TTTAACCAGTCACTGCACTGTCAATGCTCATTCttcattcaaaatttgga aGAATACAAAAGCAGCCATCGGctaaaatttacaaattatCTGTTCTGAG AGGCATATTTCCCTGCAAAATGTATCCGTTCTTTTCTTGCTAGACTCCTG TATAAACTTATCTGTTCTTGAATAAATTCAGGCTCCTTGAAATTTATATA TGTTCTTAGTTTAAATCATGACTACTTGGAAAATTCATCTGTTCTTATGC AATTTGATTGAAGCCAGGATGTTCCTTTCCTTGGTTGATTGGAAAAGtga atgaatttattttctaattgattgctcctggattttcagaacagatattt cataatCCTTCCTAGACTTTTTTtgtgcttgaaaaaaaaaaactggcACT TGGATTTAACTCCAAAGTTTcctctcctggaaaaaagaacagatattttg aagaattCCGCTGCTGGCTGCTGCTGAGAATAGTTGCTAAGAGTAATTGc gaagtaaaaaaaacaaaaaacagttACTCCCATTTCAAagagacaaaata tttgattgcCACAGTTTTAATGTTACCCTGTTAATAGCAGATTTGAATTT ATTACTAGAAgattatttcaatgttttgaaaaagcgTTTTCCCACATTAC TTTTACGAAACTGGCTAGTCGGAAGTTTTTGGACAAGGATAAAATTTCAG GCAGTTTTTCACGGAGTGATTAAAATTTTTGACTAAATTTTAGGGGGGAA AGGGGGTCTTGTAGGATGATTGCAGCCTAAGTTTTTAGCTAtaacttaaa gggacataaaaatagcaaaatgtaaacattgcgcaaaccacgtgtcatta aagagaacaattaaaatcacgtgtccaaaacaaacctgaaaacaattgaa caatcaaaattagccatatttggtttaattttctattttgacatgtgaca tttgttttgattttgtatccgctgcatacagtttgtttacaaatttcgca agtactgttatgtccttTAAATTAATTATTTGCACAGAATAGacctttca taaattacgtcacgaatatcacttgcctcgtattcaaacaattaccatgg tgattatgtctcttgagatgatttttttatgaataggaagtagctttaat aaaatccgctgggacaTAATCGcaatggcaataatttcaaaacgagacaa gtaatgtttgtgacgtaatttatgaaaaggtctattgagaaTTCAAAAGA CGGCTTGTATTTAAACTTTTATATATGCGTATTTTTTCACATTAAAGGCG Aggcaaatttaatttgttgctttacgggccaagctaccacaaaaagaggg tcggtcggtcggcgaaaaaataaaaataaaagtagaatttcatctATGAA ACTcttaaaaaggcagcaaaaactattacatcttgacaaaaatgcgaaat aggaTATTGAAAGACCCAATAAGGTCGatttcatggataaaatgaaaaat cgaacataaaattctcaaaaccttggaaaaactaccaaaattttgaaaat ttggcattctgtaaaacaatgaaaataaaaatgtactaccaaaatgtatt tcatttttatctcgatttttggaatttcagggtcggtcgggcttgtaaaa caactaatcaaattggtctcgccttagagTCTTTTAACAAAAGTTACAAT AACGTTTGCAGCTACGTTTCATGTAATTTCTCCATGCAGAACTAGAACTG TTGCATTGGTGTCGTCCCAATTTGTGACAATCAACCACGCGATCGTAACA ATCTGAAAGTTTAAGATATACATCATTGGAAATTGAATCTATTTAATCAT TTTGTTAGTGTTGTTATCCACATTCTCAAAATTTAGAAGTAGgtcaaaaa tgtttcttttgaaAGGGTGAGTTTCAAAAAACTatgccttaaccctattc aacctaggcttttaggggcggttcagaactaggggagggggggcttttcc tgtaccaccccttaacttttgatctagtgggtctttttggatgaaatttg gcacacaagatccttgtcacgtaaggtaacttttgacaaaaaattttttt gatcacGTCACTcgtcatgcccaaagtgagcaaaaaccggaaatttcctt tgttcttataaataacaattgtattctaacaaaagctttagaaaaaagtt gcctgagtttaaaatgcttattttatcccaaatattcaataaattacagt ttaaacgatatatttgacattaaaaataaatttgtattggaaaagtgtca atttttgtgacacctgtcagaaatgtcatcatgctcaaggtgtgaaaata tttaggtgtcaaatttttttttattttgaagctaaataaaagttaggaat ttacagaaaatttcaaggcaaaagctctattatttcaggaactattacca atagtttgacctccgaacagaaagagccccccccctagtacgaatagggt taaagtttttgtttttaaacaagAGTGATATCGAAAACCTTTAAATAGAT TACATGAGTATAGTACGGGGCCCGAGTACCAGTACCTAAGATTAGTTTTA GGTATGTCAAACTAAATAACAAGAGAGCTAAAGAGAACCCTTACTTCCAG GGCGTGGTGTCTCTGGTTTTGGTGTCCATGGTTTGGGCGTGTTTGGGCGT GGGGTATTAGGTCCGGGTGTCCATGGTTTGGGCGTATTTGGTACTCCAGT AACTTTACAGAATCCACAACTCTTTCTACAATGTTTTTGAAGGTAAGTTT GCCAAGAACTTGACTGACAATTTCCTTCGTGGACTTGTGAAGCACAACCT CTCAAATCGTGACAATCTGTATTGTAAAAAATTTAAGAGCTAAGATTATT CCATGAGACTATGTCACATCTACCTCGCCTTCAATCCGagctttaaaatt caaaagaacACCTTAAAGCCAGAAATGTCATTGCATGGACTAAACAATAC TCTAGTTTAGACGACCCACTTTTCACCCTGCcaattctaattgtgaatta aagtgggcaaaagattggctgtctaaagtcaatgcattgccctcttttga cgtcaatgcaatgttttctttcaacCTTTTTGAAGCAAAGAATTAAACTG cccacaattagaataggcagggcagagaGTCGGCCGTCAAAACTAGAGCT AAGAAGCAGTAGATAACAtgttcttaaaggttttgtttggaTTGAAATGT CTGATGTtgctgatgtagtaaaaacaagtgcgacaagattagaatagggt tttttttaaatgaaaatacattgaataaaaaaacattccccGCAAACGAA GAaacttttactgatactctttcaatagtttttatgtttataataaatag acacgttttctatcttataatcaaaacattcgattgcaaatttgctcgaa atcaactttgctattttttgtttacaaaagcaatagaatgtgATGTCACA TCTTGCAGGATATCNagggcagaaagtcggccgtcaaAACTAGAGCTAAG AAGCAGTAGATAACAtgttcttaaaggttttgtttggattgaaatgtctg atgatgctgatgtagtaaaaacaagtgtGACAAGATTAGAAtagggtttt tttttaatgaaattacattgaataaaaaaacattcctcgcaaacaaagaa atttttactgatactctttcgatagtttttatgtttataataaatagaca cgttttctatcttataatcaaaacattcgattgcaAATTTGCTCCaaatc aactttgctattttttgtttacaaaagcaatagaatgtgATGTCACATCT TGCAGGATATCGTTGCGTAAAAAAATAGCTTTACTTCATCCGACTCAGCA TGtaaaataagctccttttaCTCCCGTAGAAAACCTTTAATAAGTTAACT TATATAAATGGGAGGGGCTTAAAATCTGCATTCTCTGGTTTAATCTGAGG CTTGGATTattcttgataaatttttagaattttggccAACAATTGAGTCT CATGTTCATTTAAAACTGTTCTTATgggattgttcttataaaaaagcatg tattaGTTTGCATGAGAAACGAACCTTTGGATGGTGGTGTGTAGGGTGGT AATCTTTCGTTGCTTTGTgctaaaataatgaaaatcatTAATTCAGGAGA ACTTCCATTGAATGTGTAGCCAACTTTAGTATTTAATATGGatttttcag tgaaaaaaattttaataaccAACTGGAATGCACGTATTTCCTATTagcgg attcatgtaaaaaagtcacgaaaaacgtcgagaaagtctctgattggctg aaatattgcatatacaagcatattttttaaaaatgcccagagtatgaggt aatctttgcatgcctccgccaatcaaaagtttgtttactcgacgtttttt cgtgactttcgcatgaatctgctaataggaaatatgTGTATTGAGCAGGG TGAAAAAGTTTAGAACTTACgatatcaactttgttttggGAAGTTGCTGT TTtcggttttttgtttttgctgaaaCTCTCGTCAAATAAGttcaagaaaa aagaatttggaaagtgttttttttttctcaacaaagtcaattttctcgaC TGTAAGGTACTAACTTATTAGGTAGGTTTGAAAAACACCATAATGGCCGA TGATAGATTATGATAGACTaccaaactagtctgttaattatgttaattat gtcagagggcgggaacataaagacGGTTATCGtctgctagaataggagct gcgtaggagaacgagcaaaagtctgtgagaggctgctgattaacattcag cccttgccgccgacaaaatttctgcCTACGGTTACCTAACTTCTACACTC ACTTTTTCCGTGTGATACCGTTTCAGCCCGATTGGCGTGCCAGTCTAAga ttataactgaaaaaaaCTTACAACATCCGTAGAGTAAATTCAATTGTTTG ATATCAATATCACTGAATCCCCGATCGCCTTGTCCAATACCGATCTCGTA TTGTATGCTGGGATCTTTTGCCTGAATGGTCATTTTGCCGGAACCGAATG CGTCCCATGAGTAATGCATCATTGATCTGTAATCGTAGTGACCTGTTGAC AAAAATTATTGAACATTTTGAAGgtgaagtttgttttgattcccGAGGGT TAGGTTAATCTAGTTAAATGTATattagaaacattttttatgacTAGGTT GTTtgaattatggaaatttcgagttacgtaGACTTGTTGAGATGGGTTTG TTATCTGAAGCTGCGAGAAAccatgttcgagttaaggataGTTATTCGAG TTGAagatgttcgagttatggagactctataCTGTAGAAAGGGCTTTCAT AGTAAGTTGTTTCATTTTCAACATATTAGTCATTTCACTCAGATGCTTAG TAAAGTAAGGTAATTGAGGTTCCAGGTGTTAAAAAACTGATTCAATGTAC AGTATTTTCACTTTCAAAATTATCTCCTGTATGAAATTACCTTTGAGTCA GTTGTAGAGTATGATTGTTTCTTGAAATTATGTTCCGTTCCCCGGGCGAC GTTGTGGAATAAAATGGTGACGTGGTTGTCTCTGTCAGGACGTGACTGCT CGTGGTGGAAACCTATGATAAAAgatttgattggtttatttgtTAATTGG TAACAGtttattttattcttaatcTGCTTTTAGGTTTTCTACAAATTATC AGACGATTTGAGACAGTATCATATGGTCTCGTGAGAGAGGCTTTGCTCGT TATGCTACTCTTGGTACAGGACGTACACgttattttttaagaaactagtt ttaccaagcagcctcaatgtttcttaagaaatcggccttttgtgccttaa atgttttttacatgtttttgaactttttgaaataatcagcctgtttttca tgcaaagaaaaaaaaacatttgttttgattgaaaggttctttttaaaaaa cgaattaaaaaatgttattttctcattctcaggttcagcatgtttcttaa atgtttcttagtttttaggcattctgagtctcgtgtttcttaaaagtgtg tttcttaaaaaaacgtttattgtAACGACAAGAAGATAAAGGgtttaaaa cattttgtttttatttttcatctttcttttaagttttatctggttcaaaa aaatatttttacagaacATTACCAAATTAACCGAGGAAAAGAACATTCAA CTTTGCACGGCATAGACTTAAGGATCAAACCCATATAAAAGTTTAAACTT TGTCTTGACTTTGGAATATGGAAATAAATAAAGAAGCTTTTGGTGAATAT ggataaaaaaacttcaaagtcaGACAAAGTTTTACACATTATATTTCTGC TTTTCAAAAGCTTCCTCCTACAAACGAAAAAGTTGAAACATTGATTGTAC ATGTATCTAACTTTATTTTTCCTGAAGATTTCTAGCCTGTGTGACAATTT CGTAAATTTTTACTTGCCTAAACTGTGACCGATTTCATGCATGATGGTTG ATCTCCAATGACATCCTTTGGATAACGAAACCCTATTTCTGCCGCCGGTA TAACCGACTGGTGACGAACAACTAAAATAGAAAGACAGAATTCATACGCA AATCGTGAATGTGATACAGTGTTTGCTGCATCGTCAAGACAAATCTGGGC CaaactttcttaactttttgttgTATAAGCTATTCTTAGTATCAGCAACA ACTATCTCCAGAGTGGATTTGATTTTAGCTCATTCGAAAGAAGAATGTAT TTAAATATGGGGAGGGGATAGAGGATAtagcatttttttggaaatctccc cCCGGACATCAttactttttacccccggacagcaggtctaaccccccgaa caacatcagttgaccccctgggCATTCAAAATCAACCTCAAACAGAGCAA TTTTACCCCCCGGATAAGGCAAATTTGTAGATTTTCCACTATCCCCCGGA CACtgtatcctccaccccccatgtacggacattttctggaagagcgcATT CGAAAGAAGAACGTACTTAAAAACTTGTTTGAGAGGGAGTAATCAAATCC TTTTAAGGGTAAAAGACTAACGTCACAAGCAAAACCCCTTGGGACTCgga atttaataaaattcaaagTCGCTAGAACCCAAAACTACTCGTACTactcg aaagctctcgaaaacgATATAGAGGACTTTTTAGTGGACATGGTCGATTT CTCAACGTCACTCGAGAAAAACGGCGTTGAAATGACGTTTTCTAAATGAT TGGAGCACCGTAAAGGGCGTAAAGGGCGTGAACTTAGAGGTAAAGAAAAC CTTACCCTCCACCCATGTAAAAGCCGATGTAAGCTCGTTCATTTGATCGC CTCTTAAAGCGAATACAAGTATATTTGTGATATTGATCGATCGAATGTTG AAATTCACGCATGAATTTTCCATCACGGGCTATATTCAATgagtaaaaaa agaagaagtaagtaaagtaagtatctggtggctgtcggtgAAGTCGGGAA GGAGGGAGTCTATGGAATGATGGAATGATGAGGTTGAGCACCACACCTAA TCTCAGCCCAAAGTGAACTTAcaagggggccaagcctggtctctgtgaca tcttttttacaaCCTActcatttttagtctattccaaagaacagtacatt acaagatatttttgagagggaggacgcagATTAgtcccgggaaaactttt tgtgactataatagtgacgccataggcaaaactgcaagggggaaataagg ggtagagaaatagcttattttcaaaagtcaaaataaacgaaaatgattgg taccattctgatagagcatgaaattaggtcgtaaaaaagatgtcacaggA GCCCAGGCTTGGCACCTTACAGTTAGATCAGATTACGCTATTCAAGCTAC TCattcgctgagttggcggtggtCGGGATTGAACCTCTAACCCTTGGata gtacacgcttttttttttataagaatggtgtaaatccatttcatcattga tattcttaacttttttgggaaaatcatcctaaaatattcttacagcattc ttattacttgggggtaattggcaatttataatttagaaTNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNattccatgatggtgatattcttaggatattcttaattttttggcc attttcatcatggacattcttataaagtgtattcttataaaaaaaaaagc gtgtaaggaGATTGTTTTATGGACTAATAATTAATGGGTATTCGTTGAGA TAATATGGGGGAGTTCGAGGGTTTTTGACCAGTTAAAACCATCCCTGTTC TTGTAATTTCGGGAAGTgtttagaaatcaaactttgaaatgaACTCCCTC TCAAATAAGGACATCCCTCTCCGAAAGTTAGTGTAAATGTTATTTCTTTT CTCTGTTTTGTTTGGAATTTTcttttacacccccttctcacagacccact gggaccccttcccaatGAAAATAATGGTCAAAATATCATCCTagtatact ctaatttttgtccccacaaAAAATGATCGAATAAACCAATTCTCATTGCG ATATATATTACTATTTTTCCCACCCCCGCNcaagggggccaagcctggtc TCGGTGACATCTTTTTACAACCTAatcatttttagtctattccaaagaac agtacaTTACAAGGTATTTTTTAGAGGGAGGACGCAGATTAGGCCCCAGA AAACTTTTTGTGACTATAATAGTGACctcataggcaaaactgcaaggggg aaataaggggtagagaaatagctcattttcaaaagtcaaaataaacgaaa ataattggtaccatctgatagaCCATGAAattaggtcgtaaaaaagatgt cacgggagcccaggcttggccccctacaaTTAGATCACATTACGCAATTC AAGGTACTCATTCGCTGAGTTGGTGGTGGccgggatcgaacccacaaccc ttggaTTGTAAGGATAATGTTTTATggacttaaccctattcatactaggc ttttaggggcggttcagaactaggggggggcttttcctgtaccacccctt aacttttgatctagtgggNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaa aaaaaacgtgtaatcaaaTTTATTTCTGAAAAAGCCCAATGCGCTAAATg atctgaaaaatataaaatgtcaATAAGCTTGCTTTAACTTACTTTCCATT TCTGGTACCCAGGCTCCACTGGCAAAAGCCAAACAAGTTGCTAACAACAA CGTTCCTAACTTCATTATGCTCTTCTCTACTTCAGCTTTGATGCAAAAAT GTTTGAATGATTTGGAATGGCATTTTGCTGGTCCTTTTATGCAAAACCTG TGAGTGCTTAATGTcaataagatttaaaaaatactattgcagattatttt tgaagacgtaggaagaaataaaattagctttgttttgttttcctaaacat aacgcctcttcaaaaatatttgagaaagattcaaatagaaaatcactaaa aattaaaTGTAAATTTGATAATGATACGTTTCTTGATTCAATTTATGAGA TTGTTTGAGGAAGCAAGTTTGCGTGATGATTTTGCACACGCTTATGTTTG TACATTGAACTTCCCCCACACACACATACAAAAATAAGTCTAAATTCTGA AACCGAGTTCGTGAGAAATATTACGATTTGATGTAGGACACATGTCATAC CAAaatattagaaaagaaatactgACACGAATGCTACAATATTCTAGTGT GCCTCGGCTTTCTTCCATCTGCCACGTTGAAAATATCATGGCACTTTTCC AGGTGTTAAAATGTTAAGGTAATACCTGCCAACCCAAAGTTCCATACTTT AAGATAGTTTCCATCGGCCATAAAACCGTCCATGTTCAACATTAGCGAGA ATTCGAGTTGACATGTCGCCAAAATCAACGTCCACTATACTCAACGAcgg taaaaataccaaaataggagcaaaggcgatatagagccatACATAGCGAG TTTATGTCTTTACACTTTTGAGGatggtagagtgactgaagtgatttgga atagcccgcagttctgacctgcaaaatcaaggacggtaaaagtgctgatt taccgtcgtcctcaattggtcaggatctagtcaattTAGAACCTTGTAGA AAAACACACATGCATAAAAGCGGGCTTGTTCGGGGAAGAGTGCCAAGCTC TGTATCCACACGTATCACATTCACAGATGTAGAAAAACTAAACcaaacac caaaattaaaaagtcaattgactactgtatttttttttaaaNAGCTCTGT ATCCACACGTATCACATTCACAGATGTAGAAAAACTAAACcaaacaccaa aattaaaaagtcaattgactactgtattttttttagaaaaaagtccaggt aacttcatcttgattttactcaacttctgacagttttacaagaactaatt taatatcattgcgttaagaatttcttttgctatacattggtaaaaatatt gctcctaattcttaaaaattgaactagtaatcggcaaaaaaattttcatt ttatcgtcaaatcatNaaaaatcatttaatgtctcaagggatatgatcac catggaaattgtttgaatacgaggcaagtgatgttcgtgacgtaatttat gaaaaggtctatcggcaaaaaaattttcattttatcgtcaaatcatatag aaaccgtccgatttgtatggcgagccgtcttttctggattttcatatAAT Gatctaatcaacgtttttacaatgaaattttcaatagaagtgatcgttga actttgagtaatcagaaaatctgttttccatctctttacattcctctgat gtggagtaatttgttattataTAGACCGTCCATAGGCGAAGCGAGATACC cagcaaaatttatgagggagtgcagacgtttaatATGACATAtttattat cttttgataaaacaaagacaataattacagtgtcgtaaaaaccgctctta tccataaattttgcagggtatctcgctacacCTATGGCACACTCGTATTC TCCTAAACGACTATGTTAAAAGACCAAAACTCTGGTTAGGTGAAAAATCA GCTTCAATTAGTTAGGCTGTCATTTTTAAGGCAGCATACTATTTTCTAGG CGTTAGTAAGCAGCTGAACAACTTTGCCATTTCACCAGAAAGAAGTGGAA GGATCCTGAAAGAGTACAAGGAAAGTTTCTCCAGAAATAAGAAAGTTGTA TAAATCCTCtcagtagggggaaatttgtttgttcgaaagctctcaaaaaa ttaagattatagatatattgcgagtataggtgatttcagtacctaactcg agatattgagCTTTCAAAAAGTGTAAAAGCTGGACAAAAcggctgtttct ggctgaaaacactattttaagggttaatatctcgagttaggtacaaaagt cacctatacttgcaatatatcactaatcttaatttttgagagctttccaa aaatatacaacaagtCTCTGTTATCTCAAGCTAAAAATTTCAGTAATTTT AGACCccatgatttttgcctgagaccatcatatttgtccaaaaatcacat caaaatgtctgaaaaaaaattggaacctaagtaattttgattcccctacc ccttagctttccaaaaatgtataacacttaagtgctttgaccaaaacaat cgagcgattttacgaTTTTACAAATGCCCTATACtatctttctccctgga tttcacCACCTACCCTTAATACAATTCAATTTAACAACTATAATACACTA CTAGTTCTCTGATGAATTAAACTGATATTTTCAATCACAATGTAATGAAT ATTCATACACACggtgaaaatattattttatcaatttCCTACATTATACG AATTAAATAATGTGTGTTTAGAGCTCTTCAATAACGATACGTGTCACTTG ATTCCATCCTGTGTAAACATCACCAAGCGAATCAAAACCTGAACATTTCC CAACGTTGAATCCAACACTCACAACACCTGATTNT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023341XLOC_023341Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038865-exon-sc0001950-1491911889:4525..4599TCONS_00038865-exon-sc0001950-1491911889:4525..4599Clytia hemisphaericaexon
TCONS_00038865-exon-sc0001950-1510915933:4525..4599TCONS_00038865-exon-sc0001950-1510915933:4525..4599Clytia hemisphaericaexon
TCONS_00038865-exon-sc0001950-1575043694:4525..4599TCONS_00038865-exon-sc0001950-1575043694:4525..4599Clytia hemisphaericaexon
TCONS_00038865-exon-sc0001950-1491911889:25767..25909TCONS_00038865-exon-sc0001950-1491911889:25767..25909Clytia hemisphaericaexon
TCONS_00038865-exon-sc0001950-1510915933:25767..25909TCONS_00038865-exon-sc0001950-1510915933:25767..25909Clytia hemisphaericaexon
TCONS_00038865-exon-sc0001950-1575043694:25767..25909TCONS_00038865-exon-sc0001950-1575043694:25767..25909Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001950supercontigsc0001950:4525..25909 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
10.2089 6.22206 10.1142 8.48155 0 1.23004 0 0 11.8821 5.32801 5.1715 12.7483 2.54611 2.64416 3.37762 5.4434 1.91595 0 2.5759 0.580333 0 0 5.85267 5.32093 1.37011 0 0 0 1.41639 5.7723
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038865 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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