TCONS_00038847 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038847
Unique NameTCONS_00038847
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2603

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038847 ID=TCONS_00038847|Name=TCONS_00038847|organism=Clytia hemisphaerica|type=transcript|length=2603bp
TAGATATGACACACTTCCAAAGAACTTTCACCGTTGAAAAAACACTGATC
TACACACATAACTCTGGATTGGATGATGATGTTCATCATTACAAACCAAC
AAAACCCATAACAGAGGAACAAGAATGTAGACCGATACGAACTGGTCCAA
GCATTACGAAGTCTGTTGCCGACTTTAGAGAAAGATCGTTGCAGTATTTT
AAGGAAAACACAGTCACAGGGGAGCGACATTTTCCGCCATCATTTTATGT
TAAACATATCAAGGTCAAAGATTGGCTACAAAAACTGGACGAAATGAAAA
TGTTCAAAGATGTGAAATTTTTGACACCATACAATCCACGAAACCATTTG
TACATCATGGGATTGGATGATAAGGATTGTAATGAAATCATAACAACAAA
ACATGAATCGTATGATGACGTCATTCTGATTGTTGATTTTGATCGTCACC
TGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAGAAACTCTGTAT
CAAGGAATACAAAAACTTAATGATGTCACAAAAACAATTATCCATGTAGC
CAGTGATGTCATCAAAAACAATTACGTCACCATTATGTCGGTCCCAGTTT
TCCCTGACGTTGACGCGCACACTTTAAAACTGTATTCAATATTCAATGAC
AATTTTGTTCGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTG
CACACGCAAGTTGGAAACCAAATTGGAAAGCTTCTGtggaaaaactttga
aagagATGGCATCTATTAAAAGACAAGGTACCTCTTCAAGAGATCCAACT
CTGTTCAAGGGTTTATGTGGTGAAATAATGAGTTCAATGGCCTCCACAAC
ACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACACTA
TCCTTCTAAACCATAATCANATATCGGAAAATGTTCCAGAAAAGATCGAC
ACTATCCTTCTAAACCATAATCAAATTAACCTCATCAACGACCCAACGAA
ATGGAAGATTATTAAAGGACCATTTGGGTCTGGTAAGAGTGTCTCCATGT
ACGAGATTGCACGAAAACTTATGCATCAAACAGATCAACTTTATTACATT
ACTTTTGATCCATTCTCATTGGTGGATTTAAAGTTCCAAGAGGGGTTCAA
CAACTTGTGTGACGAGGAAAAACTTGACAAGTCCAAGATCAAAGCTTTCA
GTATCGGTGATGCACTAGAAGGATCAACAATCGATATTTCGGATGTTTAC
GATATGATGTATCCACCGCGTGTCAATCTTTGTCGAGTATTGGAATATCT
TTATTCTGATAAAACAAAACATTTAGGATTTATGATCGACGAGTTCCCTG
GTGATTTTCTCACAACCAAATACGCTGAAAACCTCAAAGAAAGCCTCGAA
AAGAATTTCCAGGATACGACTGTCATTCTTGCGCTCCAAAGTGTAGAAAA
AAAACGCAAAGTTATCAAATCAGGATTTTTCAATGACGATGTAAAGGAAG
TTGAGAGATGCGACTACCATCAAACCGGTATGAAAGTTCTCACTTTGGAC
AAAACAATGCGAATGGCAGTAAATATTCACCAGATGATTGAAATCTTTCA
GGAAGAAATCGAAAAAGAAATCGTAGACGTACCTTTGGAATACAAAACAC
TAGTTCTACGCAGACCGTACGAACCCTCCGCCCGCAAAATAAGAAAAGCT
ACCAAGGTTGTCCCTCTTAAGCCTCAagaacagaaaaaacaaaagcaaCC
GAGACCAACAGATGACACCAGTCTCCAAGATAACCCGAATTATCAAAGTG
TGCGAAGAAAAACCAACATTGCCTCATTctacgatccagaaaaattgtTN
CGAGTTTCCTGGTGATTTTCTCACAACCAAATACGCTGAAAACCTCAAAG
AAAGCCTCGAAAAGAATTTCCAGAATACGACTGTCATTCTTGCGCTCCAA
AGTGTAGAAAAAAAACGCAAAGTTATCAAATCAGGATTTTTCAATGATGA
TGTGAAGGAAGTTGAGAGATGCGACTACCATCAAACCGGTATGAAAGTTC
TCACTTTGGACAAAACAATGCGAATGGCAGTAAATATTCACCAGATGATT
GAAATCTTTCAGGAAGAAATCGAAAAAGAAATCGTAGACGTACCTTTGGA
ATACAAAACACTAGTTCTACGCAGACCGTACGAACCCTCCGCCCGCAAAA
TAAGAAAAGCTACCAAGGTTGTCCCTCTTAAGCCTCAagaacagaaaaaa
caaaagcaaCCGAGACCAACAGATGACACCAGTCTCCAAGATAACCCGAA
TTATCAAAGTGTGCGAAGAAAAACCAACATTGCCTCATTctacgatccag
aaaaattgtTAACAGACATAAACGCTNAAAGGCTCCTTTACCTTTTGATT
GCCAGAAAGAGTATTGTTTATCCACTCAAgcatcatcatttttttctata
GCGCAAAAACTAAACCTTACCTGTCTTCATGAAAAAGACTGTTTAGATGT
CGGTTATTTTTGGACGTACTGTATGGAGCGTTTTACACTCCGAGACTGAA
CTCTGAACCCTGTTATTGAAGAGAACGTGGCGGATCGGGTTCGCATCGTA
AAT
Run BLAST on NCBI

protein sequence of TCONS_00038847-protein

>TCONS_00038847-protein ID=TCONS_00038847-protein|Name=TCONS_00038847-protein|organism=Clytia hemisphaerica|type=polypeptide|length=620bp
DMTHFQRTFTVEKTLIYTHNSGLDDDVHHYKPTKPITEEQECRPIRTGPS
ITKSVADFRERSLQYFKENTVTGERHFPPSFYVKHIKVKDWLQKLDEMKM
FKDVKFLTPYNPRNHLYIMGLDDKDCNEIITTKHESYDDVILIVDFDRHL
LMVCSIITSNDRETLYQGIQKLNDVTKTIIHVASDVIKNNYVTIMSVPVF
PDVDAHTLKLYSIFNDNFVRCSGMLVTKNDLDCTRKLETKLESFCGKTLK
EMASIKRQGTSSRDPTLFKGLCGEIMSSMASTTQYLPKISENVPEKIDTI
LLNHNXISENVPEKIDTILLNHNQINLINDPTKWKIIKGPFGSGKSVSMY
EIARKLMHQTDQLYYITFDPFSLVDLKFQEGFNNLCDEEKLDKSKIKAFS
IGDALEGSTIDISDVYDMMYPPRVNLCRVLEYLYSDKTKHLGFMIDEFPG
DFLTTKYAENLKESLEKNFQDTTVILALQSVEKKRKVIKSGFFNDDVKEV
ERCDYHQTGMKVLTLDKTMRMAVNIHQMIEIFQEEIEKEIVDVPLEYKTL
VLRRPYEPSARKIRKATKVVPLKPQEQKKQKQPRPTDDTSLQDNPNYQSV
RRKTNIASFYDPEKLXRVSW
Run BLAST on NCBI

transcript from alignment at sc0001946:19197..24344+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038847 ID=TCONS_00038847|Name=TCONS_00038847|organism=Clytia hemisphaerica|type=transcript|length=5148bp|location=Sequence derived from alignment at sc0001946:19197..24344+ (Clytia hemisphaerica)
TAGATATGACACACTTCCAAAGAACTTTCACCGTTGAAAAAACACTGATC
TACACACATAACTCTGGATTGGATGATGATGTTCATCATTACAAACCAAC
AAAACCCATAACAGAGGAACAAGAATGTAGACCGATACGAACTGGTCCAA
GCATTACGAAGTCTGTTGCCGACTTTAGAGAAAGATCGTTGCAGTATTTT
AAGGAAAACACAGTCACAGGGGAGCGACATTTTCCGCCATCATTTTATGT
TAAACATATCAAGGTCAAAGATTGGCTACAAAAACTGGACGAAATGAAAA
TGTTCAAAGATGTGAAATTTTTGACACCATACAATCCACGAAACCATTTG
TACATCATGGGATTGGATGATAAGGATTGTAATGAAATCATAACAACAAA
ACATGAATCGTATGATGACGTCATTCTGATTGTTGATTTTGATCGTCACC
TGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAGAAACTCTGTAT
CAAGGAATACAAAAACTTAATGATGTCACAAAAACAATTATCCATGTAGC
CAGTGATGTCATCAAAAACAATTACGTCACCATTATGTCGGTCCCAGTTT
TCCCTGACGTTGACGCGCACACTTTAAAACTGTATTCAATATTCAATGAC
AATTTTGTTCGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTG
CACACGCAAGTTGGAAACCAAATTGGAAAGCTTCTGtggaaaaactttga
aagagATGGCATCTATTAAAAGACAAGGTACCTCTTCAAGAGATCCAACT
CTGTTCAAGGGTTTATGTGGTGAAATAATGAGTTCAATGGCCTCCACAAC
ACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACACTA
TCCTTCTAAACCATAATCANATATCGGAAAATGTTCCAGAAAAGATCGAC
ACTATCCTTCTAAACCATAATCAAATTAACCTCATCAACGACCCAACGAA
ATGGAAGATTATTAAAGGACCATTTGGGTCTGGtatgttttttttgcatt
tcttccaaaaatttcttaatttttttttagaatttctgGTTGTATTAGTT
CAAAAATGTCTTAATCCCTATTGTCTCCAagctttttcgatttttcttgt
CCCAGCGGGTGGGGGGCGGtcgaatctaccaccctcgattattaaTATTC
CACAAGAGCTGTGGCCATGAAAATTGGTACAGATTTTCTCCATCATGACA
CGACACAAATTtccaagaagaaaaagaaaattaatgacgtcatctaaaAA
GCAATGACATCATCAGAAATTTTCCAATtatcggaaaaaagcccaaattt
ATGGGTTACAAAAATGTCTGTCACAGTCGAACCAACAAACAAAGGTATTT
AAATTCTGTtcaaagattctgaaaggttgttctttaacataattgcNGTA
TTTAAATTCTGTtcaaagattctgaaaggttgttctttaacataattgcc
ggttttgcagtttccataaagattttatcttaaaatctgTGCAGAAGATG
AGTAAgttgtaattttctttttttttcaattttttcaaattcatattgTC
AAGgtctatcacgtgtcaaaatttgaaaattattgcaataaatatttcag
aagttatcagcactttaaaattttgaatatcagcgatttttagctgggtt
ttatgtcatgtttcacaataaaacCATACAACCtcatctggacaacctat
gaccctaagaTTTGCTTATGCACAAGTactattaaaagtcagaaaatttt
atattgtttcaaaaaatttttctccgagatatacacAAACCAAAATAATC
AGGAGTCattcataaaatattttgggGACATTTAATTGCAACGTAAAAca
tttttgaatgaatttttttcaaattttgctgacgtcagcagaaatcagca
aaaaacgaaattttgcaataaagtgtTGACGTCAGCAAAAGTAAAAAAAA
AAGTTTTTTTCAAAATGATCCTTCTGCTTGTGGCTCAAAACAGTTTCAAT
TCACTCCACCATCCACATCCAATTTTTTTCAATTATTTAATAGGTAAGAG
TGTCTCCATGTACGAGATTGCACGAAAACTTATGCATCAAACAGATCAAC
TTTATTACATTACTTTTGATCCATTCTCATTGGTGGATTTAAAGTTCCAA
GAGGGGTTCAACAACTTGTGTGACGAGGAAAAACTTGACAAGTCCAAGAT
CAAAGCTTTCAGTATCGGTGATGCACTAGAAGGATCAACAATCGATATTT
CGGATGTTTACGATATGATGTATCCACCGCGTGTCAATCTTTGTCGAGTA
TTGGAATATCTTTATTCTGATAAAACAAAACATTTAGGATTTATGATCGA
CGAGTTCCCTGGTGATTTTCTCACAACCAAATACGCTGAAAACCTCAAAG
AAAGCCTCGAAAAGAATTTCCAGGATACGACTGTCATTCTTGCGCTCCAA
AGTGTAGAAAAAAAACGCAAAGTTATCAAATCAGGATTTTTCAATGGTAG
GTCATTCTTAAACTTTGCCTAGATCAGAAAAATCATCACTTTTTACTCAT
ATTTCAATTTGTACTTTAAAGAAAATACGATAGATTCTAAGCTAATAGAG
TATACCTTTAGACCATATCTTTTATTACATGGGTTAATTGGAAGAGAATG
TTTTGCAAGTCTTGCATAtcctaccagtggataccccttaagaCCGCATA
ctccttaaaacctacaaagttggGTTTTGGGCTCTCTTAACTACCAGGCC
TAATTTTATATtacatatttcactttttagAACCTCTTATATAGGTACTT
TTATAAAATACCAAACTTAAAGAACTTTGATTATCTTAAAGCGtcgtaaa
attcaaatttattcaaaattttatcaagaNTATAAAACTTAAAGAATTTT
AATTATTGCAAAGTGtcgtaaaattcaaatttattcaaacttttatcaaa
aatctaGTTTTTCGGACCTAGAGACTACACAATTGATTTTAAGGTTATAA
AACCtaaacttgttttttattttttcacaaagcaataaaaacttttttag
cagcttttacaaaaagCATACTCATAAATTATAGATAGCCTAGACTCACC
AGAAAATGTTTCATTAGTTTCAGCCCTTACAGTTTTCTATATCAGATTTT
AAGGGGTACGTATCCTATCCACTGGTACTTTGCTTTTGAAGCAAGCGAAC
CATTCACTTCAGTATAAGCAATATTTTGCATTAAAACGGTTGCTCAAATT
ATATTTAACTTCCTTTTGTAGACGATGTAAAGGAAGTTGAGAGATGCGAC
TACCATCAAACCGGTATGAAAGTTCTCACTTTGGACAAAACAATGCGAAT
GGCAGTAAATATTCACCAGATGATTGAAATCTTTCAGGAAGAAATCGAAA
AAGAAATCGTAGACGTACCTTTGGAATACAAAACACTAGTTCTACGCAGA
CCGTACGAACCCTCCGCCCGCAAAATAAGAAAAGCTACCAAGGTTGTCCC
TCTTAAGCCTCAagaacagaaaaaacaaaagcaaCCGAGACCAACAGATG
ACACCAGTCTCCAAGATAACCCGAATTATCAAAGTGTGCGAAGAAAAACC
AACATTGCCTCATTctacgatccagaaaaattgtTNCGAGTTTCCTGGTG
ATTTTCTCACAACCAAATACGCTGAAAACCTCAAAGAAAGCCTCGAAAAG
AATTTCCAGAATACGACTGTCATTCTTGCGCTCCAAAGTGTAGAAAAAAA
ACGCAAAGTTATCAAATCAGGATTTTTCAATGGTAGGTCATTCTTAAACT
TTGCGTAGATCAGAAAAATCATCACTTTTTACTCATATTTCAATTTGTAC
TTTAAAGAAAATACGATAAATTCTAAGCTAATAGAGTATACCTTTAGACC
ATATCTTTTATTACATGTGTCAATTGGAAGAGAATGTTTTGCAAGTCTTG
CATATCCTACCAATGGATAAGACCACATActccttaaaacctacaaagtt
ggGTTTTGGGCTCTCTTAACTACCAGGCCTAATTTTATATTACATACATC
ACTTTTTAGAACCTCTTATATAGGTACTTTTATAAAATACCAAACTTAAA
GAATTTTGATCATCGCAAAGTGtcgtaaaattcaaatttattcaaaattt
tatcaagaatcccttcaaaaaatctagtTTTTCGGACCTAGAGACTACAC
AATTGATTTTAAGGTTATAAAACCtaaacttgttttttattttttcacga
agcaataaaaactttcttagcagcttttacaaaaagCATACTCATAAATT
ATAGATAGCCTAGACTCACCAGAAAATGTTTCATTAGTTTCAGCCCTTAC
AGTTTTCCATATCAGATTTTAAGGGGTACGTATCCTATCCACTGGTACTT
TGCTTTTGAAGCAAGCGAACCATTCACTTCAGTATAAGCAATATTTTGCA
TTAAAACGGTTGCTCAATTTATTATTAACTTCCTTTTGTAGATGATGTGA
AGGAAGTTGAGAGATGCGACTACCATCAAACCGGTATGAAAGTTCTCACT
TTGGACAAAACAATGCGAATGGCAGTAAATATTCACCAGATGATTGAAAT
CTTTCAGGAAGAAATCGAAAAAGAAATCGTAGACGTACCTTTGGAATACA
AAACACTAGTTCTACGCAGACCGTACGAACCCTCCGCCCGCAAAATAAGA
AAAGCTACCAAGGTTGTCCCTCTTAAGCCTCAagaacagaaaaaacaaaa
gcaaCCGAGACCAACAGATGACACCAGTCTCCAAGATAACCCGAATTATC
AAAGTGTGCGAAGAAAAACCAACATTGCCTCATTctacgatccagaaaaa
ttgtTAACAGACATAAACGCTNAAAGGCTCCTTTACCTTTTGATTGCCAG
AAAGAGTATTGTTTATCCACTCAAgcatcatcatttttttctataGCGCA
AAAACTAAACCTTACCTGTCTTCATGAAAAAGACTGTTTAGATGTCGGTT
ATTTTTGGACGTACTGTATGGAGCGTTTTACACTCCGAGACTGAACTCTG
AACCCTGTTATTGAAGAGAACGTGGCGGATCGGGTTCGCATCGTAAAT

Coding sequence (CDS) from alignment at sc0001946:19197..24344+

>TCONS_00038847 ID=TCONS_00038847|Name=TCONS_00038847|organism=Clytia hemisphaerica|type=CDS|length=5589bp|location=Sequence derived from alignment at sc0001946:19197..24344+ (Clytia hemisphaerica)
GATATGACACACTTCCAAAGAACTTTCACCGTTGAAAAAACACTGATCTA
CACACATAACTCTGGATTGGATGATGATGTTCATCATTACAAACCAACAA
AACCCATAACAGAGGAACAAGAATGTAGACCGATACGAACTGGTCCAAGC
ATTACGAAGTCTGTTGCCGACTTTAGAGAAAGATCGTTGCAGTATTTTAA
GGAAAACACAGTCACAGGGGAGCGACATTTTCCGCCATCATTTTATGTTA
AACATATCAAGGTCAAAGATTGGCTACAAAAACTGGACGAAATGAAAATG
TTCAAAGATGTGAAATTTTTGACACCATACAATCCACGAAACCATTTGTA
CATCATGGGATTGGATGATAAGGATTGTAATGAAATCATAACAACAAAAC
ATGAATCGTATGATGACGTCATTCTGATTGTTGATTTTGATCGTCACCTG
TTGATGGTATGTTCTATCATCACTTCAAATGATCGAGAAACTCTGTATCA
AGGAATACAAAAACTTAATGATGTCACAAAAACAATTATCCATGTAGCCA
GTGATGTCATCAAAAACAATTACGTCACCATTATGTCGGTCCCAGTTTTC
CCTGACGTTGACGCGCACACTTTAAAACTGTATTCAATATTCAATGACAA
TTTTGTTCGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTGCA
CACGCAAGTTGGAAACCAAATTGGAAAGCTTCTGtggaaaaactttgaaa
gagATGGCATCTATTAAAAGACAAGGTACCTCTTCAAGAGATCCAACTCT
GTTCAAGGGTTTATGTGGTGAAATAATGAGTTCAATGGCCTCCACAACAC
AATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACACTATC
CTTCTAAACCATAATCANATATCGGAAAATGTTCCAGAAAAGATCGACAC
TATCCTTCTAAACCATAATCAAATTAACCTCATCAACGACCCAACGAAAT
GGAAGATTATTAAAGGACCATTTGGGTCTGGTAAGAGTGTCTCCATGTAC
GAGATTGCACGAAAACTTATGCATCAAACAGATCAACTTTATTACATTAC
TTTTGATCCATTCTCATTGGTGGATTTAAAGTTCCAAGAGGGGTTCAACA
ACTTGTGTGACGAGGAAAAACTTGACAAGTCCAAGATCAAAGCTTTCAGT
ATCGGTGATGCACTAGAAGGATCAACAATCGATATTTCGGATGTTTACGA
TATGATGTATCCACCGCGTGTCAATCTTTGTCGAGTATTGGAATATCTTT
ATTCTGATAAAACAAAACATTTAGGATTTATGATCGACGAGTTCCCTGGT
GATTTTCTCACAACCAAATACGCTGAAAACCTCAAAGAAAGCCTCGAAAA
GAATTTCCAGGATACGACTGTCATTCTTGCGCTCCAAAGTGTAGAAAAAA
AACGCAAAGTTATCAAATCAGGATTTTTCAATGACGATGTAAAGGAAGTT
GAGAGATGCGACTACCATCAAACCGGTATGAAAGTTCTCACTTTGGACAA
AACAATGCGAATGGCAGTAAATATTCACCAGATGATTGAAATCTTTCAGG
AAGAAATCGAAAAAGAAATCGTAGACGTACCTTTGGAATACAAAACACTA
GTTCTACGCAGACCGTACGAACCCTCCGCCCGCAAAATAAGAAAAGCTAC
CAAGGTTGTCCCTCTTAAGCCTCAagaacagaaaaaacaaaagcaaCCGA
GACCAACAGATGACACCAGTCTCCAAGATAACCCGAATTATCAAAGTGTG
CGAAGAAAAACCAACATTGCCTCATTctacgatccagaaaaattgtTNCG
AGTTTCCTGGTGAGATATGACACACTTCCAAAGAACTTTCACCGTTGAAA
AAACACTGATCTACACACATAACTCTGGATTGGATGATGATGTTCATCAT
TACAAACCAACAAAACCCATAACAGAGGAACAAGAATGTAGACCGATACG
AACTGGTCCAAGCATTACGAAGTCTGTTGCCGACTTTAGAGAAAGATCGT
TGCAGTATTTTAAGGAAAACACAGTCACAGGGGAGCGACATTTTCCGCCA
TCATTTTATGTTAAACATATCAAGGTCAAAGATTGGCTACAAAAACTGGA
CGAAATGAAAATGTTCAAAGATGTGAAATTTTTGACACCATACAATCCAC
GAAACCATTTGTACATCATGGGATTGGATGATAAGGATTGTAATGAAATC
ATAACAACAAAACATGAATCGTATGATGACGTCATTCTGATTGTTGATTT
TGATCGTCACCTGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAG
AAACTCTGTATCAAGGAATACAAAAACTTAATGATGTCACAAAAACAATT
ATCCATGTAGCCAGTGATGTCATCAAAAACAATTACGTCACCATTATGTC
GGTCCCAGTTTTCCCTGACGTTGACGCGCACACTTTAAAACTGTATTCAA
TATTCAATGACAATTTTGTTCGTTGCAGTGGAATGTTGGTCACTAAAAAC
GATTTAGATTGCACACGCAAGTTGGAAACCAAATTGGAAAGCTTCTGtgg
aaaaactttgaaagagATGGCATCTATTAAAAGACAAGGTACCTCTTCAA
GAGATCCAACTCTGTTCAAGGGTTTATGTGGTGAAATAATGAGTTCAATG
GCCTCCACAACACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAA
GATCGACACTATCCTTCTAAACCATAATCANATATCGGAAAATGTTCCAG
AAAAGATCGACACTATCCTTCTAAACCATAATCAAATTAACCTCATCAAC
GACCCAACGAAATGGAAGATTATTAAAGGACCATTTGGGTCTGGTAAGAG
TGTCTCCATGTACGAGATTGCACGAAAACTTATGCATCAAACAGATCAAC
TTTATTACATTACTTTTGATCCATTCTCATTGGTGGATTTAAAGTTCCAA
GAGGGGTTCAACAACTTGTGTGACGAGGAAAAACTTGACAAGTCCAAGAT
CAAAGCTTTCAGTATCGGTGATGCACTAGAAGGATCAACAATCGATATTT
CGGATGTTTACGATATGATGTATCCACCGCGTGTCAATCTTTGTCGAGTA
TTGGAATATCTTTATTCTGATAAAACAAAACATTTAGGATTTATGATCGA
CGAGTTCCCTGGTGATTTTCTCACAACCAAATACGCTGAAAACCTCAAAG
AAAGCCTCGAAAAGAATTTCCAGGATACGACTGTCATTCTTGCGCTCCAA
AGTGTAGAAAAAAAACGCAAAGTTATCAAATCAGGATTTTTCAATGACGA
TGTAAAGGAAGTTGAGAGATGCGACTACCATCAAACCGGTATGAAAGTTC
TCACTTTGGACAAAACAATGCGAATGGCAGTAAATATTCACCAGATGATT
GAAATCTTTCAGGAAGAAATCGAAAAAGAAATCGTAGACGTACCTTTGGA
ATACAAAACACTAGTTCTACGCAGACCGTACGAACCCTCCGCCCGCAAAA
TAAGAAAAGCTACCAAGGTTGTCCCTCTTAAGCCTCAagaacagaaaaaa
caaaagcaaCCGAGACCAACAGATGACACCAGTCTCCAAGATAACCCGAA
TTATCAAAGTGTGCGAAGAAAAACCAACATTGCCTCATTctacgatccag
aaaaattgtTNCGAGTTTCCTGGTGAGATATGACACACTTCCAAAGAACT
TTCACCGTTGAAAAAACACTGATCTACACACATAACTCTGGATTGGATGA
TGATGTTCATCATTACAAACCAACAAAACCCATAACAGAGGAACAAGAAT
GTAGACCGATACGAACTGGTCCAAGCATTACGAAGTCTGTTGCCGACTTT
AGAGAAAGATCGTTGCAGTATTTTAAGGAAAACACAGTCACAGGGGAGCG
ACATTTTCCGCCATCATTTTATGTTAAACATATCAAGGTCAAAGATTGGC
TACAAAAACTGGACGAAATGAAAATGTTCAAAGATGTGAAATTTTTGACA
CCATACAATCCACGAAACCATTTGTACATCATGGGATTGGATGATAAGGA
TTGTAATGAAATCATAACAACAAAACATGAATCGTATGATGACGTCATTC
TGATTGTTGATTTTGATCGTCACCTGTTGATGGTATGTTCTATCATCACT
TCAAATGATCGAGAAACTCTGTATCAAGGAATACAAAAACTTAATGATGT
CACAAAAACAATTATCCATGTAGCCAGTGATGTCATCAAAAACAATTACG
TCACCATTATGTCGGTCCCAGTTTTCCCTGACGTTGACGCGCACACTTTA
AAACTGTATTCAATATTCAATGACAATTTTGTTCGTTGCAGTGGAATGTT
GGTCACTAAAAACGATTTAGATTGCACACGCAAGTTGGAAACCAAATTGG
AAAGCTTCTGtggaaaaactttgaaagagATGGCATCTATTAAAAGACAA
GGTACCTCTTCAAGAGATCCAACTCTGTTCAAGGGTTTATGTGGTGAAAT
AATGAGTTCAATGGCCTCCACAACACAATATCTGCCGAAGATATCGGAAA
ATGTTCCAGAAAAGATCGACACTATCCTTCTAAACCATAATCANATATCG
GAAAATGTTCCAGAAAAGATCGACACTATCCTTCTAAACCATAATCAAAT
TAACCTCATCAACGACCCAACGAAATGGAAGATTATTAAAGGACCATTTG
GGTCTGGTAAGAGTGTCTCCATGTACGAGATTGCACGAAAACTTATGCAT
CAAACAGATCAACTTTATTACATTACTTTTGATCCATTCTCATTGGTGGA
TTTAAAGTTCCAAGAGGGGTTCAACAACTTGTGTGACGAGGAAAAACTTG
ACAAGTCCAAGATCAAAGCTTTCAGTATCGGTGATGCACTAGAAGGATCA
ACAATCGATATTTCGGATGTTTACGATATGATGTATCCACCGCGTGTCAA
TCTTTGTCGAGTATTGGAATATCTTTATTCTGATAAAACAAAACATTTAG
GATTTATGATCGACGAGTTCCCTGGTGATTTTCTCACAACCAAATACGCT
GAAAACCTCAAAGAAAGCCTCGAAAAGAATTTCCAGGATACGACTGTCAT
TCTTGCGCTCCAAAGTGTAGAAAAAAAACGCAAAGTTATCAAATCAGGAT
TTTTCAATGACGATGTAAAGGAAGTTGAGAGATGCGACTACCATCAAACC
GGTATGAAAGTTCTCACTTTGGACAAAACAATGCGAATGGCAGTAAATAT
TCACCAGATGATTGAAATCTTTCAGGAAGAAATCGAAAAAGAAATCGTAG
ACGTACCTTTGGAATACAAAACACTAGTTCTACGCAGACCGTACGAACCC
TCCGCCCGCAAAATAAGAAAAGCTACCAAGGTTGTCCCTCTTAAGCCTCA
agaacagaaaaaacaaaagcaaCCGAGACCAACAGATGACACCAGTCTCC
AAGATAACCCGAATTATCAAAGTGTGCGAAGAAAAACCAACATTGCCTCA
TTctacgatccagaaaaattgtTNCGAGTTTCCTGGTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023324XLOC_023324Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038847-proteinTCONS_00038847-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038847-exon-sc0001946-1491911889:19197..20228TCONS_00038847-exon-sc0001946-1491911889:19197..20228Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1510915933:19197..20228TCONS_00038847-exon-sc0001946-1510915933:19197..20228Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1575043694:19197..20228TCONS_00038847-exon-sc0001946-1575043694:19197..20228Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1491911889:21290..21742TCONS_00038847-exon-sc0001946-1491911889:21290..21742Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1510915933:21290..21742TCONS_00038847-exon-sc0001946-1510915933:21290..21742Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1575043694:21290..21742TCONS_00038847-exon-sc0001946-1575043694:21290..21742Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1491911889:22518..23028TCONS_00038847-exon-sc0001946-1491911889:22518..23028Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1510915933:22518..23028TCONS_00038847-exon-sc0001946-1510915933:22518..23028Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1575043694:22518..23028TCONS_00038847-exon-sc0001946-1575043694:22518..23028Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1491911889:23738..24344TCONS_00038847-exon-sc0001946-1491911889:23738..24344Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1510915933:23738..24344TCONS_00038847-exon-sc0001946-1510915933:23738..24344Clytia hemisphaericaexon
TCONS_00038847-exon-sc0001946-1575043694:23738..24344TCONS_00038847-exon-sc0001946-1575043694:23738..24344Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001946supercontigsc0001946:19197..24344 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0.0835648	0.0585057	0.0724688	0.562719	0.0462387	0.983818	0.795782	2.06207	3.26665	0.839447	1.49622	1.19513	1.56076	0.219015	0	0.398024	0.294581	0.981235	1.07544	1.91736	1.62559	2.0754	0.863629
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038847 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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