XLOC_023324 (gene) - C. hemisphaerica

Overview
NameXLOC_023324
Unique NameXLOC_023324
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0001946:19197..24344+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_023324 ID=XLOC_023324|Name=XLOC_023324|organism=Clytia hemisphaerica|type=gene|length=5148bp|location=Sequence derived from alignment at sc0001946:19197..24344+ (Clytia hemisphaerica)
TAGATATGACACACTTCCAAAGAACTTTCACCGTTGAAAAAACACTGATC TACACACATAACTCTGGATTGGATGATGATGTTCATCATTACAAACCAAC AAAACCCATAACAGAGGAACAAGAATGTAGACCGATACGAACTGGTCCAA GCATTACGAAGTCTGTTGCCGACTTTAGAGAAAGATCGTTGCAGTATTTT AAGGAAAACACAGTCACAGGGGAGCGACATTTTCCGCCATCATTTTATGT TAAACATATCAAGGTCAAAGATTGGCTACAAAAACTGGACGAAATGAAAA TGTTCAAAGATGTGAAATTTTTGACACCATACAATCCACGAAACCATTTG TACATCATGGGATTGGATGATAAGGATTGTAATGAAATCATAACAACAAA ACATGAATCGTATGATGACGTCATTCTGATTGTTGATTTTGATCGTCACC TGTTGATGGTATGTTCTATCATCACTTCAAATGATCGAGAAACTCTGTAT CAAGGAATACAAAAACTTAATGATGTCACAAAAACAATTATCCATGTAGC CAGTGATGTCATCAAAAACAATTACGTCACCATTATGTCGGTCCCAGTTT TCCCTGACGTTGACGCGCACACTTTAAAACTGTATTCAATATTCAATGAC AATTTTGTTCGTTGCAGTGGAATGTTGGTCACTAAAAACGATTTAGATTG CACACGCAAGTTGGAAACCAAATTGGAAAGCTTCTGtggaaaaactttga aagagATGGCATCTATTAAAAGACAAGGTACCTCTTCAAGAGATCCAACT CTGTTCAAGGGTTTATGTGGTGAAATAATGAGTTCAATGGCCTCCACAAC ACAATATCTGCCGAAGATATCGGAAAATGTTCCAGAAAAGATCGACACTA TCCTTCTAAACCATAATCANATATCGGAAAATGTTCCAGAAAAGATCGAC ACTATCCTTCTAAACCATAATCAAATTAACCTCATCAACGACCCAACGAA ATGGAAGATTATTAAAGGACCATTTGGGTCTGGtatgttttttttgcatt tcttccaaaaatttcttaatttttttttagaatttctgGTTGTATTAGTT CAAAAATGTCTTAATCCCTATTGTCTCCAagctttttcgatttttcttgt CCCAGCGGGTGGGGGGCGGtcgaatctaccaccctcgattattaaTATTC CACAAGAGCTGTGGCCATGAAAATTGGTACAGATTTTCTCCATCATGACA CGACACAAATTtccaagaagaaaaagaaaattaatgacgtcatctaaaAA GCAATGACATCATCAGAAATTTTCCAATtatcggaaaaaagcccaaattt ATGGGTTACAAAAATGTCTGTCACAGTCGAACCAACAAACAAAGGTATTT AAATTCTGTtcaaagattctgaaaggttgttctttaacataattgcNGTA TTTAAATTCTGTtcaaagattctgaaaggttgttctttaacataattgcc ggttttgcagtttccataaagattttatcttaaaatctgTGCAGAAGATG AGTAAgttgtaattttctttttttttcaattttttcaaattcatattgTC AAGgtctatcacgtgtcaaaatttgaaaattattgcaataaatatttcag aagttatcagcactttaaaattttgaatatcagcgatttttagctgggtt ttatgtcatgtttcacaataaaacCATACAACCtcatctggacaacctat gaccctaagaTTTGCTTATGCACAAGTactattaaaagtcagaaaatttt atattgtttcaaaaaatttttctccgagatatacacAAACCAAAATAATC AGGAGTCattcataaaatattttgggGACATTTAATTGCAACGTAAAAca tttttgaatgaatttttttcaaattttgctgacgtcagcagaaatcagca aaaaacgaaattttgcaataaagtgtTGACGTCAGCAAAAGTAAAAAAAA AAGTTTTTTTCAAAATGATCCTTCTGCTTGTGGCTCAAAACAGTTTCAAT TCACTCCACCATCCACATCCAATTTTTTTCAATTATTTAATAGGTAAGAG TGTCTCCATGTACGAGATTGCACGAAAACTTATGCATCAAACAGATCAAC TTTATTACATTACTTTTGATCCATTCTCATTGGTGGATTTAAAGTTCCAA GAGGGGTTCAACAACTTGTGTGACGAGGAAAAACTTGACAAGTCCAAGAT CAAAGCTTTCAGTATCGGTGATGCACTAGAAGGATCAACAATCGATATTT CGGATGTTTACGATATGATGTATCCACCGCGTGTCAATCTTTGTCGAGTA TTGGAATATCTTTATTCTGATAAAACAAAACATTTAGGATTTATGATCGA CGAGTTCCCTGGTGATTTTCTCACAACCAAATACGCTGAAAACCTCAAAG AAAGCCTCGAAAAGAATTTCCAGGATACGACTGTCATTCTTGCGCTCCAA AGTGTAGAAAAAAAACGCAAAGTTATCAAATCAGGATTTTTCAATGGTAG GTCATTCTTAAACTTTGCCTAGATCAGAAAAATCATCACTTTTTACTCAT ATTTCAATTTGTACTTTAAAGAAAATACGATAGATTCTAAGCTAATAGAG TATACCTTTAGACCATATCTTTTATTACATGGGTTAATTGGAAGAGAATG TTTTGCAAGTCTTGCATAtcctaccagtggataccccttaagaCCGCATA ctccttaaaacctacaaagttggGTTTTGGGCTCTCTTAACTACCAGGCC TAATTTTATATtacatatttcactttttagAACCTCTTATATAGGTACTT TTATAAAATACCAAACTTAAAGAACTTTGATTATCTTAAAGCGtcgtaaa attcaaatttattcaaaattttatcaagaNTATAAAACTTAAAGAATTTT AATTATTGCAAAGTGtcgtaaaattcaaatttattcaaacttttatcaaa aatctaGTTTTTCGGACCTAGAGACTACACAATTGATTTTAAGGTTATAA AACCtaaacttgttttttattttttcacaaagcaataaaaacttttttag cagcttttacaaaaagCATACTCATAAATTATAGATAGCCTAGACTCACC AGAAAATGTTTCATTAGTTTCAGCCCTTACAGTTTTCTATATCAGATTTT AAGGGGTACGTATCCTATCCACTGGTACTTTGCTTTTGAAGCAAGCGAAC CATTCACTTCAGTATAAGCAATATTTTGCATTAAAACGGTTGCTCAAATT ATATTTAACTTCCTTTTGTAGACGATGTAAAGGAAGTTGAGAGATGCGAC TACCATCAAACCGGTATGAAAGTTCTCACTTTGGACAAAACAATGCGAAT GGCAGTAAATATTCACCAGATGATTGAAATCTTTCAGGAAGAAATCGAAA AAGAAATCGTAGACGTACCTTTGGAATACAAAACACTAGTTCTACGCAGA CCGTACGAACCCTCCGCCCGCAAAATAAGAAAAGCTACCAAGGTTGTCCC TCTTAAGCCTCAagaacagaaaaaacaaaagcaaCCGAGACCAACAGATG ACACCAGTCTCCAAGATAACCCGAATTATCAAAGTGTGCGAAGAAAAACC AACATTGCCTCATTctacgatccagaaaaattgtTNCGAGTTTCCTGGTG ATTTTCTCACAACCAAATACGCTGAAAACCTCAAAGAAAGCCTCGAAAAG AATTTCCAGAATACGACTGTCATTCTTGCGCTCCAAAGTGTAGAAAAAAA ACGCAAAGTTATCAAATCAGGATTTTTCAATGGTAGGTCATTCTTAAACT TTGCGTAGATCAGAAAAATCATCACTTTTTACTCATATTTCAATTTGTAC TTTAAAGAAAATACGATAAATTCTAAGCTAATAGAGTATACCTTTAGACC ATATCTTTTATTACATGTGTCAATTGGAAGAGAATGTTTTGCAAGTCTTG CATATCCTACCAATGGATAAGACCACATActccttaaaacctacaaagtt ggGTTTTGGGCTCTCTTAACTACCAGGCCTAATTTTATATTACATACATC ACTTTTTAGAACCTCTTATATAGGTACTTTTATAAAATACCAAACTTAAA GAATTTTGATCATCGCAAAGTGtcgtaaaattcaaatttattcaaaattt tatcaagaatcccttcaaaaaatctagtTTTTCGGACCTAGAGACTACAC AATTGATTTTAAGGTTATAAAACCtaaacttgttttttattttttcacga agcaataaaaactttcttagcagcttttacaaaaagCATACTCATAAATT ATAGATAGCCTAGACTCACCAGAAAATGTTTCATTAGTTTCAGCCCTTAC AGTTTTCCATATCAGATTTTAAGGGGTACGTATCCTATCCACTGGTACTT TGCTTTTGAAGCAAGCGAACCATTCACTTCAGTATAAGCAATATTTTGCA TTAAAACGGTTGCTCAATTTATTATTAACTTCCTTTTGTAGATGATGTGA AGGAAGTTGAGAGATGCGACTACCATCAAACCGGTATGAAAGTTCTCACT TTGGACAAAACAATGCGAATGGCAGTAAATATTCACCAGATGATTGAAAT CTTTCAGGAAGAAATCGAAAAAGAAATCGTAGACGTACCTTTGGAATACA AAACACTAGTTCTACGCAGACCGTACGAACCCTCCGCCCGCAAAATAAGA AAAGCTACCAAGGTTGTCCCTCTTAAGCCTCAagaacagaaaaaacaaaa gcaaCCGAGACCAACAGATGACACCAGTCTCCAAGATAACCCGAATTATC AAAGTGTGCGAAGAAAAACCAACATTGCCTCATTctacgatccagaaaaa ttgtTAACAGACATAAACGCTNAAAGGCTCCTTTACCTTTTGATTGCCAG AAAGAGTATTGTTTATCCACTCAAgcatcatcatttttttctataGCGCA AAAACTAAACCTTACCTGTCTTCATGAAAAAGACTGTTTAGATGTCGGTT ATTTTTGGACGTACTGTATGGAGCGTTTTACACTCCGAGACTGAACTCTG AACCCTGTTATTGAAGAGAACGTGGCGGATCGGGTTCGCATCGTAAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00038846TCONS_00038846Clytia hemisphaericatranscript
TCONS_00038847TCONS_00038847Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00038847-proteinTCONS_00038847-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001946supercontigsc0001946:19197..24344 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.12 0.08 0 0.07 0.15 0.46 0.51 0.44 1.21 0.68 0.43 8.11 6.03 17.18 20.44 8.53 9.55 10.3 9.72 2.6 2.25 3.29 4.58 5.52 6.18 20.39 10.55 17.49 15.9