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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038845 ID=TCONS_00038845|Name=TCONS_00038845|organism=Clytia hemisphaerica|type=transcript|length=1124bp
gttcagggatatccgattccgcaattccgccaatctttttccaatttttg
tcaAACCGTCTAAAAATGAACCGAAATTCCGTCATCGagaaaagtttctt
tcaaatttagaacccaatttccgtaattccatCTAAATTCTCGGCGAATT
CCGCCAACCATGACCGGGGGGGGCCAGAAGTTTattgaaagttcgatttt
gaattaaatttcattaaatagcACAGTTGAATaactaaaatatatttcaa
agatgTTTTCATAAATATACATTTTTCAACTCATAGTAAACACAAATATC
ACTTatatatttctgatatttttcagaaaaaagctaAATGTTATGGTAAA
CGGTAAACTCTGTGGTCGCATATGTCGGCGTATGCTGACATTTGACAAAT
CTTTTTCCGTGGCAAATAGAAAAAATACGAACGGTAGTTTAAGGGTTAAT
AGTTCATTTTGCCATGCTCTTGCATACTTCCAAATATAGATTCTTattaa
atttagaaataaagaaaaaatagcaaatttcAAATCATTGAACTCTACTT
TCTCCGTGTTTTACTTATGATTTGTATGCAGTGAAGACTGAGTAATCTTT
TACACGATACAAATATTTCTGCCAGGCTCCAGTGTTTGAAGGCAAGTCGt
ctaaaagattgaaaaatctATTAAAGGCTTGGTGACACGAGAAGtctttt
tcgcgttggtgcaatacaacatgctccatcctaccaacctgaaacgcttt
ctcgtgtctacaccccattcttttttttactaataaaagtgaaatcgata
ACACTGACAAGAGCCGAGATTAAATCAAGGCGGACACAACCTCCCAccat
aaaatctttaaaaaaatgatggaAAAATCATGCAACTTAGCATATGTACA
TCTATATAGAGTTtatttatgatgacgtcagcagtttcttataaaaaaat
tatgaaaaatggcAACAATTGGACATATTTTGAAACTGTTGTAGCCAATA
TGAAGTATgtgcccgaagggctagaatcgaatttttgacctttctcaggc
aagaaaaagtgaagccctAAAATATActccgtatttttgacgacgaaTTG
CATCTAGAAATTCCTATACTTTCG Run BLAST on NCBI transcript from alignment at sc0001945:16828..17951 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038845 ID=TCONS_00038845|Name=TCONS_00038845|organism=Clytia hemisphaerica|type=transcript|length=1124bp|location=Sequence derived from alignment at sc0001945:16828..17951 (Clytia hemisphaerica)
CGAAAGTATAGGAATTTCTAGATGCAAttcgtcgtcaaaaatacggagTA
TATTTTagggcttcactttttcttgcctgagaaaggtcaaaaattcgatt
ctagcccttcgggcacATACTTCATATTGGCTACAACAGTTTCAAAATAT
GTCCAATTGTTgccatttttcataatttttttataagaaactgctgacgt
catcataaataAACTCTATATAGATGTACATATGCTAAGTTGCATGATTT
TtccatcatttttttaaagattttatggTGGGAGGTTGTGTCCGCCTTGA
TTTAATCTCGGCTCTTGTCAGTGTtatcgatttcacttttattagtaaaa
aaaagaatggggtgtagacacgagaaagcgtttcaggttggtaggatgga
gcatgttgtattgcaccaacgcgaaaaagaCTTCTCGTGTCACCAAGCCT
TTAATagatttttcaatcttttagaCGACTTGCCTTCAAACACTGGAGCC
TGGCAGAAATATTTGTATCGTGTAAAAGATTACTCAGTCTTCACTGCATA
CAAATCATAAGTAAAACACGGAGAAAGTAGAGTTCAATGATTTgaaattt
gctattttttctttatttctaaatttaatAAGAATCTATATTTGGAAGTA
TGCAAGAGCATGGCAAAATGAACTATTAACCCTTAAACTACCGTTCGTAT
TTTTTCTATTTGCCACGGAAAAAGATTTGTCAAATGTCAGCATACGCCGA
CATATGCGACCACAGAGTTTACCGTTTACCATAACATTtagcttttttct
gaaaaatatcagaaatatatAAGTGATATTTGTGTTTACTATGAGTTGAA
AAATGTATATTTATGAAAAcatctttgaaatatattttagttATTCAACT
GTgctatttaatgaaatttaattcaaaatcgaactttcaatAAACTTCTG
GCCCCCCCCGGTCATGGTTGGCGGAATTCGCCGAGAATTTAGatggaatt
acggaaattgggttctaaatttgaaagaaacttttctCGATGACGGAATT
TCGGTTCATTTTTAGACGGTTtgacaaaaattggaaaaagattggcggaa
ttgcggaatcggatatccctgaac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038845-exon-sc0001945-1491911889:16828..17951 | TCONS_00038845-exon-sc0001945-1491911889:16828..17951 | Clytia hemisphaerica | exon |
| TCONS_00038845-exon-sc0001945-1510915933:16828..17951 | TCONS_00038845-exon-sc0001945-1510915933:16828..17951 | Clytia hemisphaerica | exon |
| TCONS_00038845-exon-sc0001945-1575043694:16828..17951 | TCONS_00038845-exon-sc0001945-1575043694:16828..17951 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001945 | supercontig | sc0001945:16828..17951 . |
Blast
The following BLAST results are available for this feature:
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