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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00038843 ID=TCONS_00038843|Name=TCONS_00038843|organism=Clytia hemisphaerica|type=transcript|length=1216bp
aactcggaaagttaaaggaagcaaaaattcccgagttaaaaaatggaaaa
taactcagGTAGTTAccggaagcaaaataaaccgagttatggAATGTAAA
ATGAAgccactaaattccaaaaatgacatcataactcgggataactcggt
tttatcgtaactcggtttttttaactcggaaaaaataactcgggaattcc
aggcCTCCTAAAAAGTGtcataaaagttaaattttattcaaagtttgaag
ttttacagctTTTCTAATTTATTAAgaattttttgcgagcataaactttc
gcaaatggcccttcctagaatttttaaagacatttactttcgtgaAAAGG
gccaaatttcacaaaaaaattaatacCATGTGATTGGAAACTTGCTTAGC
CAtccatttcaaaacaaatgaactacatAGCTTTCACTTGCAGCTCTACT
TTCCATTTCAAGAAATTGTGTTTGAGTGACAAagcaatcaacaaaagaaa
ccaataaaaCATTAAATAGAAAAgctgtaccgtgagattggtaACTTgca
tattttactttttttatatatccAGACGGTACAGGCTACATCATTGAAAG
TTCCAGGCGTTAGGTCAATTACACTCTTAAAACCTCAATTTTAGTAATTC
AAGCGTGCGATTAGGAGTGCTTTGCACAACTTTCAGTTGTGACATTTTAA
CACTAAGAGAGGACACAAAGAAATTAATTAGCTTAAAATTGGCTAAATTA
AAAGTAGAACAACCAGCCAAACTAGGAAGACTACAACAAAATGCTAAACA
AAAGAGGTATATATACataagattaagaaaaaggtggTTGTTAAATAGTT
GCTTGAAGCGAGAGAATGCTTTCCTAGGTATCAAAACAATtggaaaaaat
agattttactttataaattatgtaaatagaGATAAAATGTTAATCTAGTG
TAAAAGTTCCGACGCATTTATATACCTTATATCTTGTTCTTGAGTTTCCT
GTCCATACAGGTCTACTTTAGGCATATAAACTCTTTCTCGAGCTGAAAGC
TTCTTGATGCCTGCCTGACGCAAAATTTACACCATAAACTTTTGTGAATT
TAAGGACATAACCCTTTTCGCGAGTATAAATTGTGAATCAagacatgaaa
atgaaaattttgacatgaaaatgaaaattttgacatgaaaattttataaa
aacttctAACTTCTTT Run BLAST on NCBI transcript from alignment at sc0001945:3603..4818 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00038843 ID=TCONS_00038843|Name=TCONS_00038843|organism=Clytia hemisphaerica|type=transcript|length=1216bp|location=Sequence derived from alignment at sc0001945:3603..4818 (Clytia hemisphaerica)
AAAGAAGTTagaagtttttataaaattttcatgtcaaaattttcattttc
atgtcaaaattttcattttcatgtctTGATTCACAATTTATACTCGCGAA
AAGGGTTATGTCCTTAAATTCACAAAAGTTTATGGTGTAAATTTTGCGTC
AGGCAGGCATCAAGAAGCTTTCAGCTCGAGAAAGAGTTTATATGCCTAAA
GTAGACCTGTATGGACAGGAAACTCAAGAACAAGATATAAGGTATATAAA
TGCGTCGGAACTTTTACACTAGATTAACATTTTATCtctatttacataat
ttataaagtaaaatctattttttccaATTGTTTTGATACCTAGGAAAGCA
TTCTCTCGCTTCAAGCAACTATTTAACAAccacctttttcttaatcttat
GTATATATACCTCTTTTGTTTAGCATTTTGTTGTAGTCTTCCTAGTTTGG
CTGGTTGTTCTACTTTTAATTTAGCCAATTTTAAGCTAATTAATTTCTTT
GTGTCCTCTCTTAGTGTTAAAATGTCACAACTGAAAGTTGTGCAAAGCAC
TCCTAATCGCACGCTTGAATTACTAAAATTGAGGTTTTAAGAGTGTAATT
GACCTAACGCCTGGAACTTTCAATGATGTAGCCTGTACCGTCTggatata
taaaaaaagtaaaatatgcAAGTtaccaatctcacggtacagcTTTTCTA
TTTAATGttttattggtttcttttgttgattgctTTGTCACTCAAACACA
ATTTCTTGAAATGGAAAGTAGAGCTGCAAGTGAAAGCTatgtagttcatt
tgttttgaaatggaTGGCTAAGCAAGTTTCCAATCACATGgtattaattt
ttttgtgaaatttggcCCTTTtcacgaaagtaaatgtctttaaaaattct
aggaagggccatttgcgaaagtttatgctcgcaaaaaattcTTAATAAAT
TAGAAAagctgtaaaacttcaaactttgaataaaatttaacttttatgaC
ACTTTTTAGGAGgcctggaattcccgagttattttttccgagttaaaaaa
accgagttacgataaaaccgagttatcccgagttatgatgtcatttttgg
aatttagtggcTTCATTTTACATTccataactcggtttattttgcttccg
gTAACTACctgagttattttccattttttaactcgggaatttttgcttcc
tttaactttccgagtt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00038843-exon-sc0001945-1491911889:3603..4818 | TCONS_00038843-exon-sc0001945-1491911889:3603..4818 | Clytia hemisphaerica | exon |
| TCONS_00038843-exon-sc0001945-1510915933:3603..4818 | TCONS_00038843-exon-sc0001945-1510915933:3603..4818 | Clytia hemisphaerica | exon |
| TCONS_00038843-exon-sc0001945-1575043694:3603..4818 | TCONS_00038843-exon-sc0001945-1575043694:3603..4818 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0001945 | supercontig | sc0001945:3603..4818 . |
Blast
The following BLAST results are available for this feature:
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