TCONS_00038782 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038782
Unique NameTCONS_00038782
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length958

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038782 ID=TCONS_00038782|Name=TCONS_00038782|organism=Clytia hemisphaerica|type=transcript|length=958bp
CTGCTGGCTGGAAGATCATCAAGAGATCATCACTCCAATTTTAGTAGGCT
TGAGACTCGAACATGGATAGAGATTCACCAGTTGGTGCCAAACAATCTAC
TGTTTCTTTAAAGACGACCGATATTATTCCAATCAAATACTTTGTCAATT
TCTCTGACTACCAGACAGAAAGCTTCTTCCCACTTGACGAGTTTGGTATA
ATTGGTTGGCCCATTAAGGGAGTTGTCCCTGGTCTGAGTGCGTTTGTTTA
CGCCCACTTTGATTATGGTTTTCATTATCGAAGCAAAGTCAATGACAACG
AATATCAAATCCGCATGCGATTGGATAAGATCAGTGGGAAAATTGAGCAC
GACATTGACTGACACCTCAGTCTCTGTAAAGTGAAAAAGTATTTCAGAGT
CATCATGATTAAAGGAAAAACAACTAAAGGATGTCCCTCGGGAAAAGTGA
CCAATATCCATGCAAAGGCAATAACTGATTGTACTCAATTTGCTTTGAAG
ACGGTACAATTAATCAAGTACATCATGGAATTGATTTTGATGCCAAGGAA
GAGTACCTTATAATGGACACAAGGCGAGCAGCTATCTAGTGGAGTTTACG
GACAGATCCAAGAGGAGGGTGGCATCAAGCTGTTTCCATATCCTTTCACA
ATACGAAAGTTCAGAAATGAGTGAAAAAATGCTGTTGTCATGAAAACAAG
ACAGGAGGAGCTGGTTCTCAACGTGCAAGCTATTATGTTTATCAAGATAT
GAGATTGATGTTATAAACCAATTTTGGAGTGAGATTGGAATACAATGATT
ATTTTCTACCAAAATGTGGTTATGTGAATGTTTTGGTTGCCCGGTACTGT
TGATTTCGGCAACATTCAAAGTGGTATTTTGCTGAAAATGTGGGTGGTTG
TGATTTTCTATTTGGTTAAACTGTTACGTTGGAAAGCTGTGGTATGTATG
GTTTGATT
Run BLAST on NCBI

transcript from alignment at sc0001928:6624..28850+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038782 ID=TCONS_00038782|Name=TCONS_00038782|organism=Clytia hemisphaerica|type=transcript|length=22227bp|location=Sequence derived from alignment at sc0001928:6624..28850+ (Clytia hemisphaerica)
CTGCTGGCTGGAAGATCATCAAGAGATCATCACTCCAATTTTAGTAGGTA
CTATAATGTGAaacaaaatttcctttttgttattTCGTGATTGCCCATTT
TTACCCTGAAATACTGAAATAATATGACATTTTGAcgtaataatgaaaat
tttaagaacttATGCTTATgtgattgggctcttccagaaaaaaattgata
taggGGGTGGATGACgggaattttcagataaaaaaaaattctgctcaatt
ttttatttccacccttggaaattccacataatttgtcaaagttttgaaaa
aggaGGATAgcgaccctgccgacgcaccggatttaacgaacaccggacac
gcgaaagtccggtgtaaaatgagaatttttttaccaccgtcGAAGAAGGA
TcctttttccaccggacaatcaaaacataaatgTCCGGCGGCCAGAATTC
CCCGTATGCAACACCGGATTGAcgccggacttattgcgtccggtgtagcg
aaaggatactttctGCCACTGGACAAATACACCGGCAGGGTCCTGAAAAA
GGTATAGaaaattccagatttttccaccaaaaaattgattttgtatcgGA
AATCCNctggacaaatacaccggacagtccggtgcgtcggcagggtcctg
aaAAAGGTATCGaaaattccagatttttccaccaaaaaattgattttgta
tcgGAAATCCAGGACGCAGGAGTTTCAATTGCTTTTAAATTGGGAAtcca
ggaatttcaaaaaaacattttgccttAGAATTCCGCTGTCGTGCACCCCC
CTATAACGGACTTtaactggaagagcccattggagtgatccaatttaatt
tactgtcagtacagtcaagtatcaatatttgaggtattacgaaaatcgct
actttttgccgtaatcgctttcgtttttaacataaggtcttagcaacggg
taccccgggcatagttacggggcattgagaaaaaatcctgacatagaatt
tcaaaaagattcacgctatcacattctacattacaaaatacacctgttct
atgttgggtttttttactcggtgttttgtaggcttaattatcgtcatgca
aagtaaataaaaacccctggaaatctttaggttttgataagcaaaatact
tacatactattgtttacttttcaggtattcatccaatcagaattcacgct
cagaaactttcaaccaatcaagattcaaccgtgacgcgggaaatgatcca
atcagaataccgaagctaaagacttacatccaatcagaatttgttagcga
gcggtattcatccaattggaatcgcgtaacacgaaagcgaaagtgaaagt
aaaggcggaaatatattcttttttcgacgtgatttgcatatattagaaca
gaaagaaacgccaatttgtcaaagatttgtttaaaaccaccttattaTTT
GTTGAAtatcgcctaaatttatcgaaatgatatgcttttcaatattaatc
tttaaatctcttttattgttaagtatccccgCGGCGCTCAGcaccgaaag
aaaaataagcgggcggaaccgccctcgtagttaaatcccgggattgaaaa
aacctggagaaaaccttttccgtacatataatgtagctaaggaattttaa
aacacggcatttaaagtgaaacaagatgtcggagaagtagtgattggagg
tttttgtaattagacagcatggcaaaggtttgttatattttagcataaca
aagacaaactcaggaggtaaggtaaattgcgttttgactgcttttaactg
tttttctaataaagaatatcttNTtaactggaagagcccattggagtgat
ccaatttaatttactgTAATCGCAAtgaaactcatcgaacataatcgtaa
tcgaacggtCGAAATCAAAGATTAAGCAATTGTAATTGACAttcaatcga
accaattgaacatagtcaactatcaatagAACCAATTTAACCTTAGGCGG
TCAtcaaaaaaatgctctgttctcGTCGCAGCGAGTGtaaaaaatgcatg
cgggcggacgggcggtcaaaaacattcccaggttttttttaatcacgcca
gtaactcaggggcgggtggtaacgctagcaaaacaatttttcgatggtcg
tcagagcaattgagaaaaaagctatgcTTTAAATgacagtgaagtcaagt
ttgaagatattctttttagaaaaacagttaaaagctaccgtgagtatcac
ggCGCAAATAAATTCGAGCTGtgaagacaaagtttttttttaatacaaga
tcttgtagaaaaacgcTCGCAAAGTGGATATATTTCACAGTTTGGATTCG
TTTGGCTTAGAGGAGGTTGCGGATCATGTCTCatttgctttttcagaaaa
attgtgAGAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaagaga
ttttaagattaatgttgaaaagcatattttttcgataaatttaggcgata
ctcaacaaaaaataaggtggttttaaacaaatctttgacaaactggcgtt
tctttctgttctaatatatgctAATCACgtctaaaaaagaatatgtttcc
gcctttactttcactttcgctttcgtgttacgcaattccaattggatgaa
taccgctagctaacaaattctgattggctgtaagtctttagcttcgggat
tctgattggatcatttcccgcgtcacggttgaattttgattggttgaaag
tttctgagcatgaattctgattggataaatacctgaaaagtaaacaatag
tatgtaagtattttgcttatcaaaacctacagaattccagggggttttat
ttactcTGCATGACGATcattaagcctacaaaacaccaagaaaaaaaccc
aacatagaacaggtgtattttgtaatgtagaatatgatagcgtgaatatt
tttgaaattctatgtcaggattttttctcaatgctcCGTTACTATGCCCG
GGGTActcgttgctaagaccttatgttaaaaacgaaagcgattacggcaa
aaagtagcgattttcgtaatacctcaaatattgatacttgNNacaaattg
cttttcccagattttttcccgcatctccgcaccagaaaatcagcgaaaaa
tttgatgcagcgggtgacgcgaatagaacaatttttcgatgaccgcctta
cTCAAACGCAATCAAATATTTCCCAGGAATTGGCCATTATTTGATCGCAT
TTTCTTTggagttgttcgattgacaccgtctggttatgTAAACCAGACGG
TAATAATCGAATGTTCGATTGTgatcaaagtaatcaataatgatcgataa
taatcgaaggtGGTCAGTGACCACCTAACGATTTTATCGGTGATTTGAAT
ACTCACTCGACTCCTgattatggcattttcttcgaccattttttatttgt
tcaatcatttcgatTACTTTTCGATTNTATGGCATTTTCTTCAaccattt
tttatttgttcaatcatttcgattacttttcgattatataccttcgatca
tattgaataccttcgattGTATTTAGTaccggcaagtacaaaacgcctac
tacctactacttaatacttactacctactacttactacctactgtaaaat
agctcaaaacggcTCGAAATTACCTTCAAATATTCAGCatgttaaaatta
gcaaaatctgaaactttgggggtaaaaaaattaaaacttcttcttttatc
gtactttgaagccttcaaaatattttctctcttttattttgtttatgact
ttttcccgcgctttttctataaagtttacaaaCGCACTTCTTcgtagaag
agaaaaataattcCTTCGCACACTTATTTATTCAtgtcagttttatttat
aagaatcaatcaatctaaaaagttaaaatactaTAAGTAAGTAGAGCCCT
ATGTTTCACTGGGTACTTGCTGAAAATCCCTTGACATGTCTTtgacattt
attgacaaaatgacccttttgaACCAAACTATTGACAGGGTCGTTAAATA
TGACCTTTGCAGACTTCATTTTATGAagcaaaaattcttattgtgcTCAA
TAAGATGCTTTCAGTATCGGCTATCGCAAGGTAGAAACTTTCAGTAGGAA
AATACTAcaaagagctgttttagaggtgTCAATTTGACCatgtcaaatat
ttttgataaaaatattgacacagtTATCGAATATTAAAAGATTTGCAAAc
caattccaagaaatattttggcaccATTTGATATGATGCAGATTATACAA
TAGGATAGAGATAGATTGACCCCCTATTTATATTACAGAGCCTTTTTTAG
ACATTTACGTGTATTCTTATCGTCAtataataagagtcataagagagagt
acgtttaggaaaaaggaaagttcttataataagagtcataaAAGAGAGAG
TAGgtttaggaaaaagaaaaaatcaagataatgACCTTTTGTTTTATACT
TCAGTATACTTATATGAGGCGAAGAGAATATTTATTCACTACGTAAATat
gctaaatattcttttagataacacttTCTTCAAGTAAAGACTTGTGTGTT
AGCATTCAGATGTTACAAAACCACTTTTTTTAGAATAGAGATTTCGAACA
AGCGAAGGtgagttctggtctgtaaagtatacaaactgagtaggtagtaa
gtagtaagtagtaggtagtattTAGTACTTTCCAGCctttgattttatca
aatatgtttccagtagcagcgcgtcaaaataatctgaaaccaagttTACT
TCGGCCAATTAAAACCCGCAATTCATGCGTgaaaaaccactttcgttttc
tctgaCCAATCAacttgaggaaacccagggcgaAGGCTCACAAAATGGCG
GGGAAAATCACTGGGAAATAAGGGGTTAATCTTATGGCGGGCTTCTTTTT
GTCCAGGCGTACCCAATCGATGAAATCGATACGGGAAATcaatcgatatt
aatcgattttaatcaATAATAATCAATAGTGATCGATAACTAAACGATAA
TCAATCAATAGCCAATCGATACTAAGACTTTACGTTCTTATCGATTGGat
tcgattgttatcgattaCTATAACGTTACAATATTATCCATTATCGTCCA
CCTCTAAGCAAAACGCactgtcgaatatttttagatatctgatagcaaaa
tatctcttctgtagcagcgagcataaagaaaataattttttgatcaaata
attatttaaatgtcacataaataaaacagataaaagaaagttctttttaa
caaaagagaaaggaaaTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAC
GTTTtgtaattaaagagaaaaaaacaatgaaattgacatcCTTAAATAAG
atagtaaaacgttcgaaaatgttataaaaagagagaaagactGAATGACA
AAATAATCGGACAAAAAGTAAAATACACTTTTGCTAATTGGTGAACGATA
AACCATATATTCAACGTGAAAATTCGGATGTCGAAATTATTCAGTCTCGC
TTTATTGATATTCGACTCAGCTTCGCTTCGTCAAATAtcatcaagctcga
ctgaataattttcgatatccgatttttcttgtcgaatatctgcttaatgt
aCCCTTAATAAGTTCTACAGGTCAGAATATCTATAGGTTTTGTTGATTAG
CTGATCTACAAATCATTATCCAGCTTAACTGAAAATGTTGATGTTACATC
ATTATCCAGCACTGTACAAAGTTCAGATTAGcatatcttttgatatttta
aagtAACAAAAATTCTGTTACTAGATTATCCAAGCAGAACACTTCACCTA
AACCATCAGACTAATCTGAGTTACGATAAGAAATTGTTAaccatcaaaat
ggataaattTGTAACAAAGGCATGAAATGTCACAAGAGACCTTAAAAACT
TGCCTTTTTTAATGAACATGTCCTAccgtggtttttctaatttaacgcgt
ggcaataaataattattttcgacGCTACGCATGAAAAACTAGAGAACAAT
TAATTACGATATTCAAGTGTTTTAAGTATGCATTAAAGGCTTGTGTAATA
TATATTACATATAGATCGTATAATGTATTAACAAGCATTAGCTGATTTGG
AGGAGCCAGAGGAGGATGACGAAGATCCCTTTAATTTGTGTTTTTGAAAG
AAAGAAGTTTATCAGAAATAAAACTTTCCTGTCTAATTTTTCTTGTCCAA
GGCTCGATCACGCGTAATAATTAGAGTGAAattaattatgcagaattttg
gctACGCGTTAATAATTAGAGTAAGATTGATTacgatttttcgccaaaaa
cAGGGTACCCGTTAAATTAGACtacgcgttaaattagaaaaaccacggTA
CATGGTATTTGGCCATTCCTATTCCCCTGTGCATTAATCCGATTACAGTG
ATTTGTTTGTGTGATTCTACCCAATACAAGCCCTGGTCGCCAAGAGGGTT
ACAATTGCGGGAAATTCGGCCATCGAGATAGTTATTCGGTCAGTggatgt
taatgttaatgttaatgtatatattctttaaagtcgaaaaatgtgtacaa
atctgtactagcttgaaagctaatagagttcgactgcctattttacaaaa
tgaATCATTCATCATCATCTGTCAATGCCCAATCGCTGACGTTTTCTTCC
GTAGAGCATTTTGGTTtgtaatttgaagatatttttgtttggttttgtaa
ttttttaacgaggcgtagttttgttcttgggcttcctcttacgcgCCAGT
TGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNatctttatccattttgatgttatt
ttcatgaattttgatgtttttatttgttttcagccattttttcgaagagc
cttgcaaaagcgtctgatctagttgacgtcaaataaaaacttgGATAGTC
GTCCACCGACCGGTGGAAAATTGGTCGTCAGAATAGTCATCCGGCCGTCG
AAATACTTTATTGCATGAAAATTTTGCGGTTTCGCGGTCGAGTTcagaaa
accgcgaaattaaaatgcCGCGATAAACGATTTTGGAGCTCAACCGTGAA
ATTAAAATGCCGGGATTTTTTGggtcaactgaaaaaaaaaccctaaaagt
agagtcttttttgcaaaaaaatgcaataatCAAGACAAAATTCTCTTGGa
ccgcgaaattaaaatgcCGCAAATTGCAATTTTGGGCGAAATTAAAATGA
TCGCAAAATTTTCATGCCGCAAAATTTTCATGCCGCAAAATTTTCATGCA
ATAAAGTAGTTACCCGGTCGGCGAAATGGCCGTCCGGACGGCGGAAATCT
TATATCCGGCCGGCGGAAAATTTACTGTCGGAATAGTCACCGGCCGTTGG
AATAGTCATCCAGCAAATggaaaattggccgtcggaaAAGTTATACGGTC
AGCGGAAATAGAGGCCGAGCTGGTTTTTTTTCGAGCTAGTTTTATTTCGC
CGGTCAGAcaactattattattattaaattcccgcgaaactTCAGAATTT
TGAGCtctgaaccgcgaaattaaattccgcaaaaatttcttcccgcggga
atttcttcccttaaagtacgctacgatattatcgtgagatacactctggt
acacagAGTAGCGATCATACATACAGAAAATTAGCACAATCGATCGCAAT
CGATCTtaatcgataacaatcgaatTCAATCGATGGCTAATCGATAATAA
TTGAATTTAATCGATGAAAATCGATACCAAtcgataataaaattttacgt
tCCTATCGATTGGCCATCGATTAGTAATCGATCGATCATCGATTACGAAC
GACTTTTATCGATTGACATCGATTAAATCGACAATCGTTGTTATCGATTG
GGTACGCATGGTTTTGTGCTTTCGTTCTAGgtcagtttttttggtttttc
taaaaGATATATCTTAGTAATTTgttatcgaagtaatcaattggttatcg
aagttgtcaaagttatcaaaattaatcaataacaatcaaagtactcgaaC
GGTTATCGACTCTTCAAAGGGTTGCTAAGAAAGTGATCgaaaatactcac
aattttttgaatttttggtaTCAACATTCGATTCTTAATCGATAAGTGGT
TGTTCAattacttcgatcattatcgattacttcgatcattatcgattact
ttGATAATCGAACttatcgattagtaccgtcaggtgtaaacaaaaaaata
gcaaagttgatttcgagcaaatttataattgaatatttataagataaaaa
cattctatttattttaaacataaaaacattcaaaagagtatcagtaaaag
tccctttgtttgaggaatgtttttttattcaatgtattgttatttttttt
aaacctttttctaatcttgttgCACTTGTtttttactacatcagcatcat
cagacctttcaatcaaaacaaaacctttaatttgtgttattgttttgatg
ctggagccttatatttttattacaatTTGATTGAGTTATTGTTCAGTTCA
GTTATTGTTGTCCGGGGGGGAGACTTGGGCAAAAAAGGCaaataaaggtc
agtgatagGTAATCACCAGACACTTTTTGGTTTTCACCTGCCATTTTGAA
GGATAAATTATACTTTTGTCCGGTGAAAACTTGAGATTGCTtgtttgttg
aaaaaatgtaaCAAAGCACTTTTTGTCCCTGCTCTGTATATATACAAAAT
TTTGTcaccccaaaattttttgaaaaatcactgGTTAAGTCACAATTCCT
TATTTGCAACATTGCGGGGGATGTGTTGCCGTCCAGGGTACCTTCACCCA
TAAGTCCAAGGTAGGGCCGCAAAAACAcccaaatagaaaaatcagtccca
ttatgagggactgatttttttatttgaaagtagggtagcatcattggtaa
aagatgactcaacaggactcaagcagatttttgcaaaaaaatttttttgg
ctaaaaagcacatctttatctataaaaatcactatttataagcatatatc
gatgttcttagccaaattactcaattttttgatgagatagatattttttt
gctcatgaaggcttaattttgaagaatatttgtgtttagacatgaaattt
tggctgctacacgtctttttttagaaaaattggccaaattcaatattttt
ttataagcacattattaCCAATTACttagttattagcttttctcgtgATT
GTCTCATTcatttcttctgattttttgcacaaagatgcataactataaac
cctcgaatgtgacggagcccgatttcgGAAAAGATTTAAGGggcaaattc
cagccaaaaaacggctaaaaaaagtgctttttggattttgtgaaatattt
tatcattaataattttaccaaaagtttGAATCAATAAACtgtttaaggta
tgtgtacaccttttttccgattttttgtcaaaaaattttttttcagtcaa
agtggaagaaaagttactggatttcattttggtaaaatcgtgatcttaac
atcattttttgatccagagttataaccatttaaaatttcaaaacaaagtt
cgtcttataatggattatttactcaaataatcgtctctttcggaaacaac
aaagacaaaaaagagaattcagctgatgtttattctcacctctattgaat
agtaaaaaattaaaacattttaaagtgCTTTACTCGCAACAATAGAATGT
CAACAAAGCAAAACATCGATTCGCTTCGCAACAAtggaatgttttctttt
tgtggTGTGTGTACCACCCCCTCTCGCACGCAGACAAAAATAAAACGgta
gaatatttaaaaacagaacattaaaaccaaacaaaaaatgtttttacagT
TTCTTAATTATTTTAATTAGCCACCTGAAGTAGTGCAGCCCTTCAggccc
ccccacttttttaggcccccctgagtttaaaaaatgagtCCAGCTCCCAC
CCACTTTTAGGGCGATTTTAGATTTACACCTCCAAATAAGTGGGGGGGAG
NCCCTTCAGGTCTCCCCACTTTTTTAGGCCCcccctgagtttaaaaaatg
agtCCAGCTCCCACCCACTTTTAGGCCGATTTTAGATTTACACCCCCCTA
CACCCCCAAATAAGTGGGGGGAGCAGAGCCATGGTgacagaaataaaaat
tttacccAAGTTGGGTTGAACCAGCAAGCGTTGAAACCCTTGATTTGACT
ATTGCTTTAATCCTGACATGAGTTACCACAACAGCTTGCTACGAGAAAAT
CAAAGGGGGGAAAATCTCCCAATTCTGTCTGAATTGCACTGATACAAAAG
CTTCAAAGAATTCTGCTACAACAGCTGGAGCTgcctaacctgataacagc
tgttcataattttcttacgtgcacggtaaacctctgaaggcacttgaaaa
ttatacatctgaggaaaatagtcctcccacggaaaatttacaacaagaat
cttgttgtgcgccagaaagtcaaaaactgatacggcgccctattcgtaaa
cacaatcacgcaactttgttgtcatccccagtccttttagNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAg
atagcatattcgtcagattgtatgttttcacccatccctttagagcttca
gcgtggtgggcagaaaacaaccacaatctgatctcaggttagagCTGGCT
CGATCTGAATCTGATCCAACTTTAATAGGCAATGCTATAAAAGAAAGGGC
AGTTTCATAGACAGTAACGTTTAAAGCTTGTGCAGCGCTGGAAGGaactt
tcttcttttgttgaaaatgctCTGTAAGAAAATGATATTTAATAACAAGT
taaattatatctttcaactttaATTTCAAGGCTTGAGACTCGAACATGGA
TAGAGATTCACCAGTTGGTGCCAAACAATCTACTGTTTCTTTAAAGACGA
CCGATATTATTCCAATCAAATACTTTGTCAATTTCTCTGACTACCAGACA
GAAAGCTTCTTCCCACTTGACGAGTTTGGTATAATTGGTTGGCCCATTAA
GGGAGTTGTCCCTGGTCTGAGTGCGTTTGTTTACGCCCACTTTGATTATG
GTTTTCATTATCGAAGCAAAGTCAATGACAACGAATATCAAATCCGCATG
CGATTGGATAAGATCAGTGGGAAAATTGAGCACGACATTGACTGACACCT
CAGTCTCTGTAAAGTGAAAAAGTATTTCAGAGTCATCATGATTAAAGGAA
AAACAACTAAAGGATGTCCCTCGGGAAAAGTGACCAATATCCATGCAAAG
GCAATAACTGATTGTACTCAATTTGCTTTGAAGACGGTACAATTAATCAA
GTACATCATGGAATTGATTTTGATGCCAAGGAAGAGTACCTTATAATGGT
AAGATAATTACCTGTGTACTGTTATTTCAAATCAATAATCTGCTTACTCT
CCAGGTGATTTTTTAAAGGCAGGTTCTTTCCGGTCTTTCAACGTTTCAAA
TCATTTTCgtaagctcattttgggctcaaaaaaAGGGTATAACTAAGTAG
AATAAGATTCAGTCAAGGCAGATGTTTTatgatttagaaattttgcgtaa
tttgctaaaaacctcaattttgcgctattttgatgaaaaaaatctttaca
aTCATGATGGCATCAGCATTTTTTAAGTGATTCAGCTGAAAAGTGATGAC
atgatcaaattaaaaaaaaaattgtattctgATGGTCAAAACATGGCTGG
AAccaggaggggggggggggagaaagGGGGGGCAGACATAGGAAACTAAT
TTTAacctgtggctaggggggactaaacatgttaggggtcaccaaaattt
ttttagattgacctgggggctagattctatgtatgtttggtgattttttt
ctgaacttcttgtttttctttcatcatAAAGTTTACTATGGAATGTCTTC
TGTCTAAAAAAGTGTGTTTCTGAGAAAACTGTGTGTGCGCTTAGCTATTC
CTAAAAATTTGCAGCACGTCTTCATATTGTTTTCTAAAGATTTGTGCAAT
AGCGCGTCTTCACTATAGATGTAAACAGTATGCGTAAAAAAANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCctttc
cccctcgggccaaaccatggttggcccttgcggtgtcactaaacttcagc
ccccctaatataaaaatgcttcctacggcactgatctgtaataattcttt
aatcctgttgcatttaattagataaaaaatctgtctggcaAGGGATTTGC
ACCCCTAACTTACAAAACCTCGATAATCTGGCATGAACCTTCAGAACTTA
GGTTATCTCTTATTTCTTAGGgtatttattctatttagcaataagctaaa
ctaactgctgtatttgtttgattgttggaaaataatttttgaaaaaaatt
gacgtgtcattggcttaggggtcacctaaaatatttggcaaccaggggtt
acctaaatcttaggggtcacctgaattcttagcacctaaaacctgctgcc
aagctatgcaaaatttcaatttatttcattaattatatcaaaatttagtt
tcaatttttatgatcatcaaaatagcaaaaatctATGCAAAATCAGATTT
TCATTTCAACCGTAACATTTCGAGGTGAATAGAAAATACCACCTATCAAT
CAGCTTTGGGGCAGgctgaagacttcaaaaaatggtctgatacatcaaac
attttcttttggtgtttacaattgggcctacaaataatttaaaagatact
gaagttgagcaagtgcggttagcacgtagGACGTTTTTATACTCAGAATT
CAACTCAGCTCACTTTCTTTCATGTAGGCTTATCTGTTTTGGGCTTTTAA
ATTTAAACTTAAATGGAATGGGTGTTTTCAGTGTAGCTGACAGAGTGACC
AATCTTTCACAATGTATAATTGAAATACGAACCTCTTGGTATGTTTTTAT
TACAGGACACAAGGCGAGCAGCTATCTAGTGGAGTTTACGGACAGATCCA
AGAGGAGGGTGGCATCAAGCTGTTTCCATATCCTTTCACAATACGAAAGT
TCAGAAATGAGTGAAAAAATGCTGTTGTCATGAAAACAAGACAGGAGGAG
CTGGTTCTCAACGTGCAAGGTCAGTTCTTGGTTCACAAATTGCCTTTTCT
TTCGAAATTTCCTATACAGAGAAGGATCTCAATAACTTGAATCGTGTTGT
GCGCAgttatgtaatttttgcgcagatatgtaattatttacATACCACAC
CCTTTACCACGTCCATTTAACATCCATTAAACGTCTTTTTCGTGATAATT
ACTGGTGACgatggaattttgaaatgaaatttagcATGATAGGGCTTTGG
TACATACCACATCCTTTACAAATGATAACGTCTATTTAACATCCATTTAA
CATCTTTTTCATGATAAGTACTGATTGGgattgaatttttaaatgaagcT
TAGCATAGTAGGGCTTTGATACATACCACACCCATTTAACATCCATTTAA
CATCTTTTTCATGATAAGTACTGATTGGgattgaatttttaaatgaagcT
TAGCATAGTAGGGCTTTGATACATACCACACCCATTTAACATCCATTTAA
CGTCTTTTTCATAATAATCCATTTAACCTCTTTTTTCATGATAACAAgca
ttgaattttcaaatttcgatgGTTTATACCACACCCTTTGatattggaaa
aaaatattcaacgtCCATTTAGCATGTATTCATTTCTAGGTTATTTAGAT
GTATTTTCAAATAAGGTTTCACACAagagatttcattttcaatatcaaCA
GAATGAACCCTGATAATATCAATCCAATATACCCCTGTGTCACGTCTCAG
CTGGAAGAGAACtttccatccccattggaaaaaatgaaatattatacTAT
CCCCAGCNCGCTGGAAGAGAATGCTTAAAATTCCATCCCCattggaaaaa
atgaaatattatacTATCCCCAGCCCCACACTACTAGGCCCATGTTCAAT
GTATTTCATCGTCTGTCATCAAGTTTTATTTACTGTCAATTGTAAATTAT
TGACAACAAATTGTTTGCATCGACCATCAATATTCCCTTTCTTACAGTCA
ATGATTTGTTTAGACTGTCAATTATTTTGTTGGCAGCTGTCATTGTAAGT
AACGAACGGTCAATGCAaaaaattgtcaatatattcttttgattttcaag
aaaattgattgacagTCAGTGTTAagtattttttgtcaataatttgattt
tgacagtcaataaaacttgctgacagtcaatgaaaaacattgaacatggg
cctaatcaatgttttttgacctaccttaagggaattaatTCTCGCGGcaa
ctaatttttgcgagaCAGCTCCCAcgcgaaataatttaattttcgacTGT
AAATTTTCGtgaggatttaatttcgcgaattggcaaattttttcagattt
tcagatttttcgttAGTTTGATTACGTGATTTTGTCTGTACAGTagagtt
tccataactcgaacggcTACGAGGAatgaaaattattcaaattatagaga
cattcgagtaatgGAGACTCATTCAAGAGAGTTTCTTTATAGCTGaaaga
atttttaatttcttaattttcgcgggggttatttttcgcgaaaaaggcaa
AATTCGCGTAATATAATCCCAGCGAAAATTTATACCCTTAAGGTAGTAGT
GTCCATTGTAAAAATAAATCTTAATTGCCCATCCCCACTGGGTACTTGTG
ATTGAAAACACTAAAAATCAATATCCCAATCATAAAATTAAAGGGATTTT
CCGTCCCCACTGGGATATTTTTTCCTGAATTTATCCCCCTTGGcgataat
aaaaaatcataacaaaaaaGACGTTGGATGGATACTAAATGGAAGTTACA
TACCAGGAGTCTATCATAGTTTcatttaaaaactttcttagAAGCTATCA
TAAATGGATGTTAAATGGGCATTGCCAAATTCAAAGAGTGTGGTATATAC
CAAAGCCCTACCATGCTAAGTTTcatttaaaaactttcttagAAGCTATC
ATAAATGGATGTTAAATGGGCATTGCCAAATTCAAAGAGTGTGGTATATA
CCAAACGTCTATCATgctaaatttcatttcaaaattcaatcgTGATCAGT
ACTTATcatgaaaaaaatgttaaatggATGTTAAATGGACGTTATCATTT
TCAAAGGGTGTGGTATATACCAAAGTCCTATCATGCCAAGTTTcgtttaa
aaatttaaacccaatCATTAATCATCGTGAAAAAGACGTTAAATGGATGT
GAAATGGATGTTGTCATTTTCAAACAGTGTGGTATGTACCTAAGTCCTac
cactttttgataaataacgagattgctcacaggaaagcgaaaaatcgacg
ttttgggcgttttcagatgacgtcagcattttcctagaagcattttcaga
aaaaatcattcccacggctggatagccctgaattagtagtatccaaaaat
ggtatcgTTTGTTAACTTTCTATGTCTAAATCTGCTGGCCTAGGATAAGG
CATTGAACAGTCAGCTACCGATGTAACAGTTTTGAGAGTTCGAATCCTAA
ACGGTGCGTTGTAGTAtgtgttattttgtcagcattgaccaatctttttc
tggttttatgagctcttattgatatttttgaaaattcccgttagaatttt
aataaacaaaaattttctaagtaGTGTTTGAGGTTTGACTTTGTCATCAA
GTactttatttcaaaatggatcaggttggTTAGCAGATGGAAAGGCAATA
GTCTCATGACTTttccttctcttgaaaatccagtattccaaaactataaa
aatacataaaaatcgactttcgtctttttttcCTATCTTACAAACACCtt
tttcagaaccacaagtGACTGAATATgctgctaaaaaatgattgacaggt
ctaaaaaatgattgacaggtgcgggtttgctcgcgcgggttagaaattcc
cgtgagcaatctcgttatttatcagaatGTGTCCTACCATGCCAAGTTTT
ATTTAGAAATTCAATCCCAATCATTAATTATCATGAAAAAGACGTTAAAT
GGATGTGAAATGGACGTTGTCATTTTCAAACGGTGTGGTATGTACTTAAG
CCTTATCGTgctaaatttcatttaaaagaaaCTAAGTCCATACAGTAGGA
TGAAAGTTATTTTAcatgctgactgaaattcgcAAAACTATTATCATAAA
ACCGTTCGCTAATTACATAACTGCACAGAAAATAATTACATAGCTGCGCA
GCTcgaaaattacatatctgcgcaaaataattacatttcTGTGCAAGATA
ATTACATATCTgtgcagaaattacatatctgtgcAAAAATTACATAACTG
TGCACAACAAATCTCTATATATATCTCAAATTTTTCCCTAACTTGTACAG
ATTTAACACCCCTTGTTTATTTGATGGagtaattttttgttaaaagatgA
ATTCTCATCTTATTTTCAAAGTAATAACATGAGATACACAGGTTTGGTTA
AATTTTAGTAATTCCCAAAAATGTGACAGAgcacaatttttgaagaaaag
tattttttgttttcaggattttcttattagaattttctgatttcttttat
tttttaatttaaatttaagaccaagtaaataatccatcatgaCACATGAA
TTTTCAGTTGGtatttgaaaatctatttaTATGTCTATTTTtggtgaccc
ctaagccaatgatACGTCAAATTCTTTcgaaaatccttctcaaactatca
aacaaatacaacagttagtttagcttattgctaaatagaataaatgccct
aagaaatTAGAGATAAGCTAAGTACTGAAGGTTACTGCCAGATTATCAAG
TCAGGGTGTAGATCCCTTGCcgacagattttttatctaaggACTAAGGAA
ATGCAAcatgattaaagaatttttacagatcagtgccgtaggaagcattt
tcatattagggAGGCCGAAGTTTAGTGataccgcgagggccaaccatggt
ttggcccgagggggaaaattttgaaaatttgagctctagaatGCTTGGAA
ATGCACTCAAAGCATGCACttataagacaattatgacaaattcaaaaaga
aaactttgcaaaataaccatttttgaaaaaattattggggttATAGTCAC
CCTTGCCCCCCCCCTANtaaccatttttgaaaaaattattggggttATAG
TCACCCTTGCCCCCCCCCTatgctacggcactgcagataatatattagat
accaaattgtcagtttttgagcattgcttagattaaaatataagttGAGA
AATGCCAACCTATGGTCTGGTAGGCTGCTTACAAATcaatcaccaaacat
agaatgtagcccccaggtccatctgaaaaaatttaggtgacccctacagg
gttagtcccccctagccacaggctaaaatcaggtaccaatcGCTGCTtga
ccttttagcccccccctgCGGCCAggggggggttccagccatgaTGTCCC
TAACTAaagtttcagtttcagtttcagcctttttaaaggctttttttaaa
ggaataccaatcaaattttaggttttgaagcattttaTTCTTGTTTCTAT
TATTTTAGTGCTTATTTAAATTTAATGACCATCATCCTGTTCTCATGGAA
TCGTAGTTTCAATCTTATGTTCAATAATGTTGAGTATAACTTGTTTCTTC
TTAATTCATAGCTATTATGTTTATCAAGATATGAGATTGATGTTATAAAC
CAATTTTGGAGTGAGATTGGAATACAATGATTATTTTCTACCAAAATGTG
GTTATGTGAATGTTTTGGTAAGCATATCTTCCAAAATGTAATTTCATACT
CTTGTTCCAAccaaaacttttgatgaaacaCTGGGGTGTGCTTATTATGC
ctattaatttcaaattttggtaaaTCATTTTGATCAGAAATTGCAgatta
tttgatttgattttttcagcaaaatgCATGCGCTTCGGTCAAATATCAAC
CTTgtaatataaaaaagatttaacatTTTCACGTATTTACATTTTATTGA
TGGGCTTTTATAGAAATTGTCTGTACCCCCTGTTGAAGCTATCCATTTTT
GAGCTCCACAGCCCCCTGGATGTATGGCTTTAAAATAAAGATTCCCTGAT
GGATATCCCCTTACTCTGCTctagaccccctggatatccaagcatTCTGT
CTAGACTCCCTGGATAAATTTTGCATTATACTCTAGGCCAACTTGATATC
CTTAAAAAAGTTCTCTTGAATACCAATGAACTCTTTTGAACAGTCATCGA
CATTAATTGTAATTCTTGTATTGAGCCAAATGGATACTTCTCAATAGTTC
TAGCATcacaataaaacaaatgaatgaTATGAAATAATAGAAATAACTGA
TTTCTTTTTTCCTGCTACAGATAAAGTTTCTTTAATATCAATAATTCCAA
AGGTATACAAAAGATTGTAAGAACATCAAGAAACATTGAATACTTTTAGA
AtagttattttccttcaaaaatacatgaaaaatcaatgcCATTTTCCTTC
ATACAAAGAACGTCGaaatcattttccttcaaaagcgGTCAAAAGTACAA
AGAAGTTTCTTTAATGTCAATTCAATCAGTATACAAAAGATTCTAAGAAC
ATCAAGAAACATAGAATACTTTTAGAAtagttattttccttcaaaaatac
atgaaaaatcaatgtcATTTTCCTTCATACAGAGAACGTCGAtataattt
tccttcaaaagtacAAAGAATATAGGGTTTATTCTTCTTATAAAGATCTT
AGAATGTTGGATTTGTTTTCCttcggaaaataaaaataatatcagGCTCA
TTCTCCTTGTAAAGTACAGATGCTCTATTATAGTCATAACAATTTCAAAG
AGTGGTCAAAGCAATCTTTTCACAAAATGTGATAGAATGCCTAAAAGCAA
CCCCAGGCCTTACCCGAAAGTTCgaatttctcataaaaaatgtttaattc
ATGCTCaaatattgaaagtttttttctgatccTCAGTGAAATATTTGAAT
TCATAAAAATCGNTATTATGCctattaatttcaaattttggtaaaTCATT
TTGATCAGAAATTGCAgattatttgatttgattttttcagcAAAACAAAA
TGCATGCGCTTCGGTCAAATATCAACCttgtaatataaaaaaaatttaac
attttcacGTATTTACATTTTATTGATGGGCTTTTATAGAAATTGTCTGT
ACCTCGTTGAAGCTATCCATTTTTGAGCTCCACAGGCCCTGGATGTATGG
CTTTAAAATAAAGATTCCCTGATGGATATCCCCTTACTCTGCTctagacc
ccctggatatccaagcatTCTGTCTAGACTCCCTGGATAAATTTTGCATT
ATACTCTNgaaaaatcactaaaattatCTTACTGTACTCTTTCAAGTTCC
AACTACAACCAGCTGAACTCGAAAAGATACATAAGAGTCTTATGTATCGT
TCTATTAATGTACAGTATTATGTTTAATTTTGATAGGGTTACCCACACAT
CTTATGATTTTTTATGTTTCGCTCACTTTACTGTATATGTCTTTCTTTCA
TCAGGTTGCCCGGTACTGTTGATTTCGGCAACATTCAAAGTGGTATTTTG
CTGAAAATGTGGGTGGTTGTGATTTTCTATTTGGTTAAACTGTTACGTTG
GAAAGCTGTGGTATGTATGGTTTGATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023279XLOC_023279Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038782-exon-sc0001928-1491911889:6624..6670TCONS_00038782-exon-sc0001928-1491911889:6624..6670Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1510915933:6624..6670TCONS_00038782-exon-sc0001928-1510915933:6624..6670Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1575043694:6624..6670TCONS_00038782-exon-sc0001928-1575043694:6624..6670Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1491911889:19804..20321TCONS_00038782-exon-sc0001928-1491911889:19804..20321Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1510915933:19804..20321TCONS_00038782-exon-sc0001928-1510915933:19804..20321Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1575043694:19804..20321TCONS_00038782-exon-sc0001928-1575043694:19804..20321Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1491911889:22029..22192TCONS_00038782-exon-sc0001928-1491911889:22029..22192Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1510915933:22029..22192TCONS_00038782-exon-sc0001928-1510915933:22029..22192Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1575043694:22029..22192TCONS_00038782-exon-sc0001928-1575043694:22029..22192Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1491911889:26835..26940TCONS_00038782-exon-sc0001928-1491911889:26835..26940Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1510915933:26835..26940TCONS_00038782-exon-sc0001928-1510915933:26835..26940Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1575043694:26835..26940TCONS_00038782-exon-sc0001928-1575043694:26835..26940Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1491911889:28728..28850TCONS_00038782-exon-sc0001928-1491911889:28728..28850Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1510915933:28728..28850TCONS_00038782-exon-sc0001928-1510915933:28728..28850Clytia hemisphaericaexon
TCONS_00038782-exon-sc0001928-1575043694:28728..28850TCONS_00038782-exon-sc0001928-1575043694:28728..28850Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001928supercontigsc0001928:6624..28850 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.55001	0	1.56921	0.140245	0.247855	0.034692	0.00612698	0.162651	0	0.00702412	0.103972	0	0.315891	0.140062	0.747324	0.268631	0.196738	0.996171	0	0	0	0.127857	1.95245	2.78998	0	0	0.0635054	0.207182	1.00262	0.131703
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00038782 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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