TCONS_00038610 (transcript) - C. hemisphaerica

Overview
NameTCONS_00038610
Unique NameTCONS_00038610
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1749

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00038610 ID=TCONS_00038610|Name=TCONS_00038610|organism=Clytia hemisphaerica|type=transcript|length=1749bp
ACAACCCAAGGAAAAATATTACCACCATGAAATTATGTAATAGTGTCTAG
GCTAATGCTAAAAGAAAGTTTAGATATTTTGTGTatatggacatgttttt
taattgtttcgtttttggcattttcaaaaaagctaaattttgattgggaT
AACTTGGaggtctgaaattttcacaggatgttaGTAGTGATGATAGGACC
CCAAAAAGTTCTTTTCCCAAAATTCTAGCTGTTGTAGGGGCCGGTTAGGA
GCAAATTTTAGCNTTACAGGAGATGGCACTACTTCAAACTGCTTAATCAT
TGGAGAACTCCTCAAACAAGCTGATCTCTATGTGTCTGAAGGCTTGCACC
CACGTCTTGCCACAGAAGGATTTGAGATGGCCAAGAAAAGAGCTCTTGAG
gtTTTGGAAGAGATCAAAGTTGAAAATACCATGGAGAGAGACATTTTGAT
CAATGTTGCACGAACCTCACTGAGAACCAAAGTTCCCAAAGAATTAGCAG
ATCATCTCACTGAGATTGTTGTTGATGCTGTCCTTGCCATCAAACGCGAT
GGGAAGCCAATCGATCTTCACATGGTTGAGATTATGGAAATGACTCACAA
GACTGATTCTGAAACCAAGCTGATCAGAGGTATTGTGATGGACCATGGAG
CACGTCACCCTGACATGAAAAAAAAAGTAGATGATGCTTTCATTTTGACA
TGTAATGTCTCCATGGAGTACGAAAAGAGTGAGGTCAATGCTGGATTCTT
CTACAAAACCGCTGACGAGAGAGAAAAGTTAGTCCACGCTGAACGAAAGT
TCACCGATGATAAAGTTCGTCAAGTTATTGAATTCAAGAAGAAAGTTTGC
GATGCTGGTGACAAAGGATTTGTGATTGTCAACCAAAAGGGTATTGATCC
CGTCTCTTTGGACATGTTAGCAAAAGAAGGAATCGTTGCTTTGAGAAGAG
CTAAGAGAAGAAACATGGAAAGAATCCCTTTGGCATTTGGTGGTTATGCA
GTCAACTCATTCGATGACCTCTCTGAAGATTGTCTCGGAAAAGCTGGCAA
CGTTTACGAACATGCTTTAGGTGACAACAAATACACTTTCATCGAAGACA
CGGAGAACCCGAAATCAGTGACCATTTTGGTGAAAGGTCCCAACAAGCAC
ACCATCACTATGATCAAAGATGCTGTCCGTGATGGACTACGTGCTGTAAA
GAACGCCATCGAAGACGGAGCTGTGATCCCTGGTGCAGGAGCATACGAAA
TCGCTGCACACTCGGCATTGACGATCTTACGCGAAACGGTATCGACAAGA
GCAAGACTCGGTGTTCAGGCTTTTGCTGACGCACTCTTAATCATCCCCAA
AGCGTTGGCCTCGAATTCCGGATACGATCCACAAGAAGCGACCGTCAAAT
TACAAGCGGAATACGGAAAATCGAAAGTTCCGGTTGGAATCGACTTAAAC
ACGGGCGAACCAATGAACCCTGCAACGAACGGCGTTTGGGACAACTATCG
CGTTAAACGACAACTTATCAACTCATGGTAAGGCTTTGTAAACCTAtcgg
gctcttccagaaaatgttcgtacctTAAggactctgaccatagtccaaaa
attgattgtggtatttgaacataaaagttatatttcaggttccttaacac
ttttaacaaagaaccATTTTACTGGATACGTCTTATCAACGACCGTTCaa
aagttaaatatctcaacCATTTTCCAAGttcgttaaaatatctttcatg
Run BLAST on NCBI

protein sequence of TCONS_00038610-protein

>TCONS_00038610-protein ID=TCONS_00038610-protein|Name=TCONS_00038610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MAKKRALEVLEEIKVENTMERDILINVARTSLRTKVPKELADHLTEIVVD
AVLAIKRDGKPIDLHMVEIMEMTHKTDSETKLIRGIVMDHGARHPDMKKK
VDDAFILTCNVSMEYEKSEVNAGFFYKTADEREKLVHAERKFTDDKVRQV
IEFKKKVCDAGDKGFVIVNQKGIDPVSLDMLAKEGIVALRRAKRRNMERI
PLAFGGYAVNSFDDLSEDCLGKAGNVYEHALGDNKYTFIEDTENPKSVTI
LVKGPNKHTITMIKDAVRDGLRAVKNAIEDGAVIPGAGAYEIAAHSALTI
LRETVSTRARLGVQAFADALLIIPKALASNSGYDPQEATVKLQAEYGKSK
VPVGIDLNTGEPMNPATNGVWDNYRVKRQLINSW
Run BLAST on NCBI

transcript from alignment at sc0001892:24593..33223+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00038610 ID=TCONS_00038610|Name=TCONS_00038610|organism=Clytia hemisphaerica|type=transcript|length=8631bp|location=Sequence derived from alignment at sc0001892:24593..33223+ (Clytia hemisphaerica)
ACAACCCAAGGAAAAATATTACCACCATGAAATTATGTAATAGTGTCTAG
GCTAATGCTAAAAGAAAGTTTAGATATTTTGTGTatatggacatgttttt
taattgtttcgtttttggcattttcaaaaaagctaaattttgattgggaT
AACTTGGaggtctgaaattttcacaggatgttaGTAGTGATGATAGGACC
CCAAAAAGTTCTTTTCCCAAAATTCTAGCTGTTGTAGGGGCCGGTTAGGA
GCAAATTTTAGCNTTACAGGAGATGGCACTACTTCAAACTGCTTAATCAT
TGGAGAACTCCTCAAACAAGCTGATCTCTATGTGTCTGAAGGCTTGCACC
CACGTCTTGCCACAGAAGGATTTGAGATGGCCAAGAAAAGAGCTCTTGAG
GTAAGAGAGTGTATTACATAAGTGTTGGAGGTAGAAAGCAGGGAGTTTCT
CTTGAAattgtttctgaattttctttacTCGTATCATAcagatttttaaa
gaaagtacTTTGGATAGTATTGAATATCAGAATTATCAAGTTATTCGAGG
TAATCCTTAGGATATACTAGTTCTGCCAGGGGGGTACaaaggcagggtac
taacccatagccgggtggtggtgtctatttttgcatttcaaaaaagttag
tacccggtactattttaggggtgggggtgtgtatttttcactcttctAGC
AAGTACAGGGTACTATTTTGGTACTTTTTCACAGAGTTTTGttccttttt
caataaaaaaagtagtctttcgtaatattttgacttttttcaaatattat
ttttttgatattaaattttttttaattgagaaacttttttttactctttt
gagaaattttttgatttttgtgaagacaaaactttcgaaatggTGAAGAA
GTgtgttattaaaaaaattaaaggacAAAAGCCTCTGACTTAATCAATGA
TAGTTTGTTTGAATAGCATACCAttgcgaatctaaaaatagacattgatt
ttcatgtttgactgaaattcaatcccatcaccctttgcgtttattatgct
tgcacgcaaattacactcaattacaaagaaaaagtaataactttcacgac
ttttgaattNgaatctaaaaatagacattgattttcatgtttgactgaaa
ttcaatcccagtagcagtgggctatagaggccttttttttcaaaattaag
tttgcataattttttttggttggttgggacccaaataacataaatctaag
atatttttggatatttccgaaaAATGGCGGTTCTCCGCCCTTTTTTATGc
ccaaaatgggccattttcgggccattttgcttggaaaaaaaatctaaaac
ctgctgtgttggtgctacaacCNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcctgctgtg
ttggtgctacaaccatcaaattaggctcaaaatgatccttggaaaaaaga
aggattagaatgtaacaattatatacctctgcCATATATATAAACTTTAA
AGATTAGGTTTTTcggccaaaattgaccaaaattgcgaaaaaacagggtt
tcgcctggaaaaaaatctaatatctgttctgtttgtgctacaagcctcaa
attagagtcaaaatattcgttggaaaaaagtaggattagaatgtaacaat
tatatacttcTACCATATatgtaaacttcaaaaaatttggatattgGGCC
AAAATTGACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTTGGTG
CTATGAACCTCAAATTATgcttaaaatattccttggaggaaagtaggatt
agaatgtaacaaatatatacctctaccatatatataaaattcaaaaatta
gctATTTAGGCCAAAATGGACCGACACCAGGAAAACGCTGGGTTTTGCCT
GtaaataaaacctaaaatctgcGCTGTTGGtgctacaaacctcaaattag
gcttaaaatgttccttggaaaaaagcagGATAAGAATGTAGCAATTATGT
ACCTCTTACCTCTTAAAATTAGGATTTCAGGCCAAAATGGACGGATACCG
GTAAAACCCAGTGTCTTCCCGGTTTCCGTCCATTTTGGCCTGAaatccta
atttttttaattttatatacatGGTAAGAGGTACATAATTGCTAAATTCT
TATCctgcttttttccaaggaacattttaagcctaatttgaggtttgtag
caCGAACAGTgcagattttaggttttatttccaggcaaaacccagCGTTT
TCCTGGTGTCGGTCCATTCTGCCCTAAATagctaatttttgaattttata
tatgTGGTAGAGGTATGTAATTGCTATATTCGATTCCTGCCTtttcccaa
ggaacattttaagcctaatttgaggtttgtagcacaaatagaacagattt
taggtttcatttccaggcaaaacccagTTTCTTCCCGGTTTCGGTCTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTTTATATATATggtagaggtatataattgttacattc
taatcctactttcctccaaggaatattttaagcataatttgaggttcata
gcaccaacagaacagatttttagatttttttcccaggcaaaccctttttt
ccccagtttcggtcaattttgccccaatttccaaattttttgaagtttac
atATATGGTAGAAGTATATAATtattacattctaatcctacttttttcca
acgaatattttgaccctaatttgaggcttgtagcacaaacagaacagatt
ttagatttttttccaggcaaaaccctgNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Naataactttcacgacttttgaattaagacaaaaaggattgtgggattga
atttcggtcaaatgagagaaataataatcatgacgtttGCACGACGAAGT
GCTATTATCTGTCCAtttcagtcagaaaaactaACATAGTACCCTCTCTT
TTGGTCTAATCTGCAAAATATAAGATTTTAGGGGGTGGTGTCtctatttt
ttacagcaaaaatgaagtagtacctagtactaaatatgggtgggtggtac
taaaaagaaattgagtgaaagatcaagttagtaccctatgggttagtacc
ctgcctctgtACCCCCCCTGGTTCTGcctaccttattacacttgATAGCT
ATTTACTCAAGTTACCAATGTAATGAGAATTGGGTTGTACCCAAGTTATT
TACAGCCTGTAATTTCCAGCAATTGGTAATTTTCCAATGAATTATTGTAC
TTATTTCTCCCGGGTTGAATACTTGATTATTTAAATATATATAAGATATT
GTTAATAATGAGTAATGGGATACAAAAagtatctttttcttttttcttag
gtTTTGGAAGAGATCAAAGTTGAAAATACCATGGAGAGAGACATTTTGAT
CAATGTTGCACGAACCTCACTGAGAACCAAAGTTCCCAAAGAATTAGCAG
ATCATCTCACTGAGGTAACTTTTTATGCtgaccagggggggggggtccat
gtacaaaacatcggcatgtatcagtactttgtagcaaatttcgattttaa
acacccacctacccctatagtacaaaatgtacaaaataatactatccagc
aaactcccaaaaacacccaaatacaccctgacaccccctgtatagtacac
gtatactaaacagcaaatcagaaatttgaccctgacacccccatGCAGGG
ATCGAATGCGTATCGCATTTCGCAATTCCCGATGCAtttttggattactt
acaagctaaaaattgaaaattgatccattttaggatacaaaatcatgctt
atcaaaaaattgcgatgcactttctatcccttatttcgatgcctgCCATG
TATAGTACACAAGTATAAAcagcaaaatcttttgaaaacacccacccacc
ccatgaAACATGTCGCTTTTTTGTACATGCCCCCCCCTGTGCTGACAAAT
AATCCATGCAACATACACGTTTAATagacaaaactaaaaattcaatAGGC
CATAGCCAAACAATGATGTTTTAACTTCAGACTCTGATAAACTTTCATAA
ATCTCAGGAGGGTATTGATTTTCAGAAGGGTATTGACTGTCAGAAGACTG
GCTTAATAAACTTTGTCAAGGATAACAATCACACCAAGCTATTATTATCT
ACCAAAGTGAATTTTAAATACCACCTGTAGATTGTTGTTGATGCTGTCCT
TGCCATCAAACGCGATGGGAAGCCAATCGATCTTCACATGGTTGAGATTA
TGGAAATGACTCACAAGACTGATTCTGAAACCAAGTAAGAATTAGTTGGC
CAAGCACCAGTAATTTGTGCAAAACTTAAACAACCCTGTTAAGCCTCTCC
TCCTGTAAAAAAGACCTAAAAAAGACAACTCTGTCTTAATTAACCTAGAC
TACATAGAgcctacttctgactgaactttgctttcctATAATTTTGATGA
CATTGAGATTGAGTCAAGTAAAGTAGACTAGGGGATATTATTATCATGAA
ttgtttcactttcgttttcaaaattacaagcaaacaaagaaacaATAAAA
TATGTTCTAAAACTTCGTCAAAGTTCATGAAACTATAACAAACACATAAA
GATACCTTCCAAATTTGAAAAGTATTAGTGATATTGTTCTGGATCTAGTA
GTATGTCTTTGCCACCCtctcaagcaaagccaaaattttgAGTCAGCCAA
ATTACACCAGTTTACACCATCCAgtttatcaaaaagctataagtggcTCC
CGGGCTATTATTATCCCTGAATAAGTAAAAAGCAAGAcggaaagtgaaaa
aataaaaacaaaacattcccTTTTTTGTAACCATGATGAATTAAGTATTT
TATAATTTGAGAGGGTTTCACCATTCTTCATCACTTCACTTTTATTCAGG
CTGATCAGAGGTATTGTGATGGACCATGGAGCACGTCACCCTGACATGAA
AAAAAAAGTAGATGATGCTTTCATTTTGACATGTAATGTCTCCATGGAGT
ACGAAAAGAGGTCAGTATTGTTTGATCTTGTAATTAATGCACAATCTTTC
TTATTTGAAGATGGTTGATATGTATACTGCTACGTCACTAAACGACATGC
TGTCTGAGATTTAAGTATTGACTTCTTTGTTGGGTTTTGTTTTGAGGTAT
TTTTTCAAATactaaaaattgatttcaaatttcacGTTGAAATAATTCCT
TTCTATTCGCCAATTTCAAATTGCTTTGTTTTAAATTTCAGTGAGGTCAA
TGCTGGATTCTTCTACAAAACCGCTGACGAGAGAGAAAAGTTAGTCCACG
CTGAACGAAAGTTCACCGATGATAAAGTTCGTCAAGTTATTGAATTCAAG
AAGAAAGTTTGCGATGCTGGTGACAAAGGATTTGTGATTGTCAACCAAAA
GGTATGATGACATTGTATTGCAACCAATTAAATTATTGATTTTTCAGTTT
TGTGAAAAAACTTCCAAACGGACTACCATTAAGCCTATCTGACTAGCTTC
TCCTTACAGAGGATTCCCGGTTCTGTATCGAGTGGTCTAGAGTTGTCTTG
TTAGAATCGTCTTACGCTGAAGTTTATACTGCCTGCTAGCTTGCGAAACA
CTGACACACAATTTTCAGATCAAATGCGTTAATTCAGCGTGAGCTACTAG
GGAACAAGGCCAGCGCACTCTTACATCATCCACAATATGTTGTGGAATCA
ATACCTAGCATAGTCCCTGACAGGCTTCTTGAGTCTCCGTCTCACATGGC
ATGGGGTTGGCTTGGGCGAAGGTATTTTCGCTTGTCAAGTGAATCacagc
accgagtgggaatcgaaccctgtcCTCCTAGACGGCTGTCAAGAAttata
accactacactactgggCATTAACTTTGCGTGAACTTACATATTGCAGTA
TGCAGtactgacgagtcctaataaggacgaaatgcatatgctgctctgcc
acccaaatctcctgaaagaagatagttagacagaaattctttgaatttct
tcacatttatatttgaataaataatATTTTGGTATCATCTTCGTCTCTCG
TAGTTTTATACggcatttcaaattttaagctTTTCATTCGAATCATTCTT
GCTTATTTTCATTCCAGGGTATTGATCCCGTCTCTTTGGACATGTTAGCA
AAAGAAGGAATCGTTGCTTTGAGAAGAGCTAAGAGAAGAAACATGGAAAG
GTACAGTATCTTGAGGACTATTTTCATAATTTCGAATTACACAGTACCAC
CTTAGATTAGAGCTTCCTAATCATAGAgggaaaattacatttttcaatCC
AGCACAGACCTCTTTTGTTTGTATTTCTACTTTGTTACTTTTATGCCAAT
TTATTGTAACGTATAAAGTAGATTGGCTCGTTGATTTTTAATCTCGAAAC
TATTATTTCTCAATTCTTTGTACAGAATCCCTTTGGCATTTGGTGGTTAT
GCAGTCAACTCATTCGATGACCTCTCTGAAGATTGTCTCGGAAAAGCTGG
CAACGTTTACGAACATGCTTTAGGTGACAACAAATACACTTTCATCGAAG
ACACGGAGAACCCGAAATCAGTGACCATTTTGGTGAAAGGTCCCAACAAG
CACACCATCACTATGATCAAAGATGCTGTCCGTGATGGACTACGTGCTGT
AAAGAACGCCATCGAAGACGGTATGCTAAATTAATTGTTGTCATTTTCTC
TTAACATGAGTggtaaaaacctgaaaaataaagCCACTCATAAGTCTTTT
GAAATGAGCTTGATTCTTTCGACATGAAATCTTGCACATGCTTTTGAATT
TCCTAATACACAAACTATTCATTTATAGTAGTAAGTTATCCCAGTAGTCT
AAAATATGTTAAAATGAAATCTCAGTGACCATTCTTGGGGGCTGTTAAAC
GATATCACAAAATGTTTCACAAATAATATAGCTATTTATTATgttgaaat
tattgaaaataatttgtcTTTAGGAGCTGTGATCCCTGGTGCAGGAGCAT
ACGAAATCGCTGCACACTCGGCATTGACGATCTTACGCGAAACGGTATCG
ACAAGAGCAAGACTCGGTGTTCAGGTaaagtttgatattttctttaacag
atcTCGTTATGAGCGTTTGCTTGCACTTTTTGAACTTTCGCCGAATAAAA
CCAGTCTTTAAAATTCGTGTCAATTATTTCAAGCACACAAGATCTGACCT
GATTGGAGAAGTTCGATCGAttttaataatatttatttCTTTCTTTGCAG
GCTTTTGCTGACGCACTCTTAATCATCCCCAAAGCGTTGGCCTCGAATTC
CGGATACGATCCACAAGAAGCGACCGTCAAATTACAAGCGGAATACGGAA
AATCGAAAGTTCCGGTTGGAATCGACTTAAACACGGGCGAACCAATGAAC
CCTGCAACGAACGGCGTTTGGGACAACTATCGCGTTAAACGACAACTTAT
CAACTCATGGTAAGGCTTTGTAAACCTAtcgggctcttccagaaaatgtt
cgtacctTAAggactctgaccatagtccaaaaattgattgtggtatttga
acataaaagttatatttcaggttccttaacacttttaacaaagaaccATT
TTACTGGATACGTCTTATCAACGACCGTTCaaaagttaaatatctcaacC
ATTTTCCAAGttcgttaaaatatctttcatg

Coding sequence (CDS) from alignment at sc0001892:24593..33223+

>TCONS_00038610 ID=TCONS_00038610|Name=TCONS_00038610|organism=Clytia hemisphaerica|type=CDS|length=10395bp|location=Sequence derived from alignment at sc0001892:24593..33223+ (Clytia hemisphaerica)
ATGGCCAAGAAAAGAGCTCTTGAGgtTTTGGAAGAGATCAAAGTTGAAAA
TACCATGGAGAGAGACATTTTGATCAATGTTGCACGAACCTCACTGAGAA
CCAAAGTTCCCAAAGAATTAGCAGATCATCTCACTGAGATTGTTGTTGAT
GCTGTCCTTGCCATCAAACGCGATGGGAAGCCAATCGATCTTCACATGGT
TGAGATTATGGAAATGACTCACAAGACTGATTCTGAAACCAAGCTGATCA
GAGGTATTGTGATGGACCATGGAGCACGTCACCCTGACATGAAAAAAAAA
GTAGATGATGCTTTCATTTTGACATGTAATGTCTCCATGGAGTACGAAAA
GAGTGAGGTCAATGCTGGATTCTTCTACAAAACCGCTGACGAGAGAGAAA
AGTTAGTCCACGCTGAACGAAAGTTCACCGATGATAAAGTTCGTCAAGTT
ATTGAATTCAAGAAGAAAGTTTGCGATGCTGGTGACAAAGGATTTGTGAT
TGTCAACCAAAAGGGTATTGATCCCGTCTCTTTGGACATGTTAGCAAAAG
AAGGAATCGTTGCTTTGAGAAGAGCTAAGAGAAGAAACATGGAAAGAATC
CCTTTGGCATTTGGTGGTTATGCAGTCAACTCATTCGATGACCTCTCTGA
AGATTGTCTCGGAAAAGCTGGCAACGTTTACGAACATGCTTTAGGTGACA
ACAAATACACTTTCATCGAAGACACGGAGAACCCGAAATCAGTGACCATT
TTGGTGAAAGGTCCCAACAAGCACACCATCACTATGATCAAAGATGCTGT
CCGTGATGGACTACGTGCTGTAAAGAACGCCATCGAAGACGGAGCTGTGA
TCCCTGGTGCAGGAGCATACGAAATCGCTGCACACTCGGCATTGACGATC
TTACGCGAAACGGTATCGACAAGAGCAAGACTCGGTGTTCAGGCTTTTGC
TGACGCACTCTTAATCATCCCCAAAGCGTTGGCCTCGAATTCCGGATACG
ATCCACAAGAAGCGACCGTCAAATTACAAGCGGAATACGGAAAATCGAAA
GTTCCGGTTGGAATCGACTTAAACACGGGCGAACCAATGAACCCTGCAAC
GAACGGCGTTTGGGACAACTATCGCGTTAAACGACAACTTATCAACTCAT
GGTAAATGGCCAAGAAAAGAGCTCTTGAGgtTTTGGAAGAGATCAAAGTT
GAAAATACCATGGAGAGAGACATTTTGATCAATGTTGCACGAACCTCACT
GAGAACCAAAGTTCCCAAAGAATTAGCAGATCATCTCACTGAGATTGTTG
TTGATGCTGTCCTTGCCATCAAACGCGATGGGAAGCCAATCGATCTTCAC
ATGGTTGAGATTATGGAAATGACTCACAAGACTGATTCTGAAACCAAGCT
GATCAGAGGTATTGTGATGGACCATGGAGCACGTCACCCTGACATGAAAA
AAAAAGTAGATGATGCTTTCATTTTGACATGTAATGTCTCCATGGAGTAC
GAAAAGAGTGAGGTCAATGCTGGATTCTTCTACAAAACCGCTGACGAGAG
AGAAAAGTTAGTCCACGCTGAACGAAAGTTCACCGATGATAAAGTTCGTC
AAGTTATTGAATTCAAGAAGAAAGTTTGCGATGCTGGTGACAAAGGATTT
GTGATTGTCAACCAAAAGGGTATTGATCCCGTCTCTTTGGACATGTTAGC
AAAAGAAGGAATCGTTGCTTTGAGAAGAGCTAAGAGAAGAAACATGGAAA
GAATCCCTTTGGCATTTGGTGGTTATGCAGTCAACTCATTCGATGACCTC
TCTGAAGATTGTCTCGGAAAAGCTGGCAACGTTTACGAACATGCTTTAGG
TGACAACAAATACACTTTCATCGAAGACACGGAGAACCCGAAATCAGTGA
CCATTTTGGTGAAAGGTCCCAACAAGCACACCATCACTATGATCAAAGAT
GCTGTCCGTGATGGACTACGTGCTGTAAAGAACGCCATCGAAGACGGAGC
TGTGATCCCTGGTGCAGGAGCATACGAAATCGCTGCACACTCGGCATTGA
CGATCTTACGCGAAACGGTATCGACAAGAGCAAGACTCGGTGTTCAGGCT
TTTGCTGACGCACTCTTAATCATCCCCAAAGCGTTGGCCTCGAATTCCGG
ATACGATCCACAAGAAGCGACCGTCAAATTACAAGCGGAATACGGAAAAT
CGAAAGTTCCGGTTGGAATCGACTTAAACACGGGCGAACCAATGAACCCT
GCAACGAACGGCGTTTGGGACAACTATCGCGTTAAACGACAACTTATCAA
CTCATGGTAAATGGCCAAGAAAAGAGCTCTTGAGgtTTTGGAAGAGATCA
AAGTTGAAAATACCATGGAGAGAGACATTTTGATCAATGTTGCACGAACC
TCACTGAGAACCAAAGTTCCCAAAGAATTAGCAGATCATCTCACTGAGAT
TGTTGTTGATGCTGTCCTTGCCATCAAACGCGATGGGAAGCCAATCGATC
TTCACATGGTTGAGATTATGGAAATGACTCACAAGACTGATTCTGAAACC
AAGCTGATCAGAGGTATTGTGATGGACCATGGAGCACGTCACCCTGACAT
GAAAAAAAAAGTAGATGATGCTTTCATTTTGACATGTAATGTCTCCATGG
AGTACGAAAAGAGTGAGGTCAATGCTGGATTCTTCTACAAAACCGCTGAC
GAGAGAGAAAAGTTAGTCCACGCTGAACGAAAGTTCACCGATGATAAAGT
TCGTCAAGTTATTGAATTCAAGAAGAAAGTTTGCGATGCTGGTGACAAAG
GATTTGTGATTGTCAACCAAAAGGGTATTGATCCCGTCTCTTTGGACATG
TTAGCAAAAGAAGGAATCGTTGCTTTGAGAAGAGCTAAGAGAAGAAACAT
GGAAAGAATCCCTTTGGCATTTGGTGGTTATGCAGTCAACTCATTCGATG
ACCTCTCTGAAGATTGTCTCGGAAAAGCTGGCAACGTTTACGAACATGCT
TTAGGTGACAACAAATACACTTTCATCGAAGACACGGAGAACCCGAAATC
AGTGACCATTTTGGTGAAAGGTCCCAACAAGCACACCATCACTATGATCA
AAGATGCTGTCCGTGATGGACTACGTGCTGTAAAGAACGCCATCGAAGAC
GGAGCTGTGATCCCTGGTGCAGGAGCATACGAAATCGCTGCACACTCGGC
ATTGACGATCTTACGCGAAACGGTATCGACAAGAGCAAGACTCGGTGTTC
AGGCTTTTGCTGACGCACTCTTAATCATCCCCAAAGCGTTGGCCTCGAAT
TCCGGATACGATCCACAAGAAGCGACCGTCAAATTACAAGCGGAATACGG
AAAATCGAAAGTTCCGGTTGGAATCGACTTAAACACGGGCGAACCAATGA
ACCCTGCAACGAACGGCGTTTGGGACAACTATCGCGTTAAACGACAACTT
ATCAACTCATGGTAAATGGCCAAGAAAAGAGCTCTTGAGgtTTTGGAAGA
GATCAAAGTTGAAAATACCATGGAGAGAGACATTTTGATCAATGTTGCAC
GAACCTCACTGAGAACCAAAGTTCCCAAAGAATTAGCAGATCATCTCACT
GAGATTGTTGTTGATGCTGTCCTTGCCATCAAACGCGATGGGAAGCCAAT
CGATCTTCACATGGTTGAGATTATGGAAATGACTCACAAGACTGATTCTG
AAACCAAGCTGATCAGAGGTATTGTGATGGACCATGGAGCACGTCACCCT
GACATGAAAAAAAAAGTAGATGATGCTTTCATTTTGACATGTAATGTCTC
CATGGAGTACGAAAAGAGTGAGGTCAATGCTGGATTCTTCTACAAAACCG
CTGACGAGAGAGAAAAGTTAGTCCACGCTGAACGAAAGTTCACCGATGAT
AAAGTTCGTCAAGTTATTGAATTCAAGAAGAAAGTTTGCGATGCTGGTGA
CAAAGGATTTGTGATTGTCAACCAAAAGGGTATTGATCCCGTCTCTTTGG
ACATGTTAGCAAAAGAAGGAATCGTTGCTTTGAGAAGAGCTAAGAGAAGA
AACATGGAAAGAATCCCTTTGGCATTTGGTGGTTATGCAGTCAACTCATT
CGATGACCTCTCTGAAGATTGTCTCGGAAAAGCTGGCAACGTTTACGAAC
ATGCTTTAGGTGACAACAAATACACTTTCATCGAAGACACGGAGAACCCG
AAATCAGTGACCATTTTGGTGAAAGGTCCCAACAAGCACACCATCACTAT
GATCAAAGATGCTGTCCGTGATGGACTACGTGCTGTAAAGAACGCCATCG
AAGACGGAGCTGTGATCCCTGGTGCAGGAGCATACGAAATCGCTGCACAC
TCGGCATTGACGATCTTACGCGAAACGGTATCGACAAGAGCAAGACTCGG
TGTTCAGGCTTTTGCTGACGCACTCTTAATCATCCCCAAAGCGTTGGCCT
CGAATTCCGGATACGATCCACAAGAAGCGACCGTCAAATTACAAGCGGAA
TACGGAAAATCGAAAGTTCCGGTTGGAATCGACTTAAACACGGGCGAACC
AATGAACCCTGCAACGAACGGCGTTTGGGACAACTATCGCGTTAAACGAC
AACTTATCAACTCATGGTAAATGGCCAAGAAAAGAGCTCTTGAGgtTTTG
GAAGAGATCAAAGTTGAAAATACCATGGAGAGAGACATTTTGATCAATGT
TGCACGAACCTCACTGAGAACCAAAGTTCCCAAAGAATTAGCAGATCATC
TCACTGAGATTGTTGTTGATGCTGTCCTTGCCATCAAACGCGATGGGAAG
CCAATCGATCTTCACATGGTTGAGATTATGGAAATGACTCACAAGACTGA
TTCTGAAACCAAGCTGATCAGAGGTATTGTGATGGACCATGGAGCACGTC
ACCCTGACATGAAAAAAAAAGTAGATGATGCTTTCATTTTGACATGTAAT
GTCTCCATGGAGTACGAAAAGAGTGAGGTCAATGCTGGATTCTTCTACAA
AACCGCTGACGAGAGAGAAAAGTTAGTCCACGCTGAACGAAAGTTCACCG
ATGATAAAGTTCGTCAAGTTATTGAATTCAAGAAGAAAGTTTGCGATGCT
GGTGACAAAGGATTTGTGATTGTCAACCAAAAGGGTATTGATCCCGTCTC
TTTGGACATGTTAGCAAAAGAAGGAATCGTTGCTTTGAGAAGAGCTAAGA
GAAGAAACATGGAAAGAATCCCTTTGGCATTTGGTGGTTATGCAGTCAAC
TCATTCGATGACCTCTCTGAAGATTGTCTCGGAAAAGCTGGCAACGTTTA
CGAACATGCTTTAGGTGACAACAAATACACTTTCATCGAAGACACGGAGA
ACCCGAAATCAGTGACCATTTTGGTGAAAGGTCCCAACAAGCACACCATC
ACTATGATCAAAGATGCTGTCCGTGATGGACTACGTGCTGTAAAGAACGC
CATCGAAGACGGAGCTGTGATCCCTGGTGCAGGAGCATACGAAATCGCTG
CACACTCGGCATTGACGATCTTACGCGAAACGGTATCGACAAGAGCAAGA
CTCGGTGTTCAGGCTTTTGCTGACGCACTCTTAATCATCCCCAAAGCGTT
GGCCTCGAATTCCGGATACGATCCACAAGAAGCGACCGTCAAATTACAAG
CGGAATACGGAAAATCGAAAGTTCCGGTTGGAATCGACTTAAACACGGGC
GAACCAATGAACCCTGCAACGAACGGCGTTTGGGACAACTATCGCGTTAA
ACGACAACTTATCAACTCATGGTAAATGGCCAAGAAAAGAGCTCTTGAGg
tTTTGGAAGAGATCAAAGTTGAAAATACCATGGAGAGAGACATTTTGATC
AATGTTGCACGAACCTCACTGAGAACCAAAGTTCCCAAAGAATTAGCAGA
TCATCTCACTGAGATTGTTGTTGATGCTGTCCTTGCCATCAAACGCGATG
GGAAGCCAATCGATCTTCACATGGTTGAGATTATGGAAATGACTCACAAG
ACTGATTCTGAAACCAAGCTGATCAGAGGTATTGTGATGGACCATGGAGC
ACGTCACCCTGACATGAAAAAAAAAGTAGATGATGCTTTCATTTTGACAT
GTAATGTCTCCATGGAGTACGAAAAGAGTGAGGTCAATGCTGGATTCTTC
TACAAAACCGCTGACGAGAGAGAAAAGTTAGTCCACGCTGAACGAAAGTT
CACCGATGATAAAGTTCGTCAAGTTATTGAATTCAAGAAGAAAGTTTGCG
ATGCTGGTGACAAAGGATTTGTGATTGTCAACCAAAAGGGTATTGATCCC
GTCTCTTTGGACATGTTAGCAAAAGAAGGAATCGTTGCTTTGAGAAGAGC
TAAGAGAAGAAACATGGAAAGAATCCCTTTGGCATTTGGTGGTTATGCAG
TCAACTCATTCGATGACCTCTCTGAAGATTGTCTCGGAAAAGCTGGCAAC
GTTTACGAACATGCTTTAGGTGACAACAAATACACTTTCATCGAAGACAC
GGAGAACCCGAAATCAGTGACCATTTTGGTGAAAGGTCCCAACAAGCACA
CCATCACTATGATCAAAGATGCTGTCCGTGATGGACTACGTGCTGTAAAG
AACGCCATCGAAGACGGAGCTGTGATCCCTGGTGCAGGAGCATACGAAAT
CGCTGCACACTCGGCATTGACGATCTTACGCGAAACGGTATCGACAAGAG
CAAGACTCGGTGTTCAGGCTTTTGCTGACGCACTCTTAATCATCCCCAAA
GCGTTGGCCTCGAATTCCGGATACGATCCACAAGAAGCGACCGTCAAATT
ACAAGCGGAATACGGAAAATCGAAAGTTCCGGTTGGAATCGACTTAAACA
CGGGCGAACCAATGAACCCTGCAACGAACGGCGTTTGGGACAACTATCGC
GTTAAACGACAACTTATCAACTCATGGTAAATGGCCAAGAAAAGAGCTCT
TGAGgtTTTGGAAGAGATCAAAGTTGAAAATACCATGGAGAGAGACATTT
TGATCAATGTTGCACGAACCTCACTGAGAACCAAAGTTCCCAAAGAATTA
GCAGATCATCTCACTGAGATTGTTGTTGATGCTGTCCTTGCCATCAAACG
CGATGGGAAGCCAATCGATCTTCACATGGTTGAGATTATGGAAATGACTC
ACAAGACTGATTCTGAAACCAAGCTGATCAGAGGTATTGTGATGGACCAT
GGAGCACGTCACCCTGACATGAAAAAAAAAGTAGATGATGCTTTCATTTT
GACATGTAATGTCTCCATGGAGTACGAAAAGAGTGAGGTCAATGCTGGAT
TCTTCTACAAAACCGCTGACGAGAGAGAAAAGTTAGTCCACGCTGAACGA
AAGTTCACCGATGATAAAGTTCGTCAAGTTATTGAATTCAAGAAGAAAGT
TTGCGATGCTGGTGACAAAGGATTTGTGATTGTCAACCAAAAGGGTATTG
ATCCCGTCTCTTTGGACATGTTAGCAAAAGAAGGAATCGTTGCTTTGAGA
AGAGCTAAGAGAAGAAACATGGAAAGAATCCCTTTGGCATTTGGTGGTTA
TGCAGTCAACTCATTCGATGACCTCTCTGAAGATTGTCTCGGAAAAGCTG
GCAACGTTTACGAACATGCTTTAGGTGACAACAAATACACTTTCATCGAA
GACACGGAGAACCCGAAATCAGTGACCATTTTGGTGAAAGGTCCCAACAA
GCACACCATCACTATGATCAAAGATGCTGTCCGTGATGGACTACGTGCTG
TAAAGAACGCCATCGAAGACGGAGCTGTGATCCCTGGTGCAGGAGCATAC
GAAATCGCTGCACACTCGGCATTGACGATCTTACGCGAAACGGTATCGAC
AAGAGCAAGACTCGGTGTTCAGGCTTTTGCTGACGCACTCTTAATCATCC
CCAAAGCGTTGGCCTCGAATTCCGGATACGATCCACAAGAAGCGACCGTC
AAATTACAAGCGGAATACGGAAAATCGAAAGTTCCGGTTGGAATCGACTT
AAACACGGGCGAACCAATGAACCCTGCAACGAACGGCGTTTGGGACAACT
ATCGCGTTAAACGACAACTTATCAACTCATGGTAAATGGCCAAGAAAAGA
GCTCTTGAGgtTTTGGAAGAGATCAAAGTTGAAAATACCATGGAGAGAGA
CATTTTGATCAATGTTGCACGAACCTCACTGAGAACCAAAGTTCCCAAAG
AATTAGCAGATCATCTCACTGAGATTGTTGTTGATGCTGTCCTTGCCATC
AAACGCGATGGGAAGCCAATCGATCTTCACATGGTTGAGATTATGGAAAT
GACTCACAAGACTGATTCTGAAACCAAGCTGATCAGAGGTATTGTGATGG
ACCATGGAGCACGTCACCCTGACATGAAAAAAAAAGTAGATGATGCTTTC
ATTTTGACATGTAATGTCTCCATGGAGTACGAAAAGAGTGAGGTCAATGC
TGGATTCTTCTACAAAACCGCTGACGAGAGAGAAAAGTTAGTCCACGCTG
AACGAAAGTTCACCGATGATAAAGTTCGTCAAGTTATTGAATTCAAGAAG
AAAGTTTGCGATGCTGGTGACAAAGGATTTGTGATTGTCAACCAAAAGGG
TATTGATCCCGTCTCTTTGGACATGTTAGCAAAAGAAGGAATCGTTGCTT
TGAGAAGAGCTAAGAGAAGAAACATGGAAAGAATCCCTTTGGCATTTGGT
GGTTATGCAGTCAACTCATTCGATGACCTCTCTGAAGATTGTCTCGGAAA
AGCTGGCAACGTTTACGAACATGCTTTAGGTGACAACAAATACACTTTCA
TCGAAGACACGGAGAACCCGAAATCAGTGACCATTTTGGTGAAAGGTCCC
AACAAGCACACCATCACTATGATCAAAGATGCTGTCCGTGATGGACTACG
TGCTGTAAAGAACGCCATCGAAGACGGAGCTGTGATCCCTGGTGCAGGAG
CATACGAAATCGCTGCACACTCGGCATTGACGATCTTACGCGAAACGGTA
TCGACAAGAGCAAGACTCGGTGTTCAGGCTTTTGCTGACGCACTCTTAAT
CATCCCCAAAGCGTTGGCCTCGAATTCCGGATACGATCCACAAGAAGCGA
CCGTCAAATTACAAGCGGAATACGGAAAATCGAAAGTTCCGGTTGGAATC
GACTTAAACACGGGCGAACCAATGAACCCTGCAACGAACGGCGTTTGGGA
CAACTATCGCGTTAAACGACAACTTATCAACTCATGGTAAATGGCCAAGA
AAAGAGCTCTTGAGgtTTTGGAAGAGATCAAAGTTGAAAATACCATGGAG
AGAGACATTTTGATCAATGTTGCACGAACCTCACTGAGAACCAAAGTTCC
CAAAGAATTAGCAGATCATCTCACTGAGATTGTTGTTGATGCTGTCCTTG
CCATCAAACGCGATGGGAAGCCAATCGATCTTCACATGGTTGAGATTATG
GAAATGACTCACAAGACTGATTCTGAAACCAAGCTGATCAGAGGTATTGT
GATGGACCATGGAGCACGTCACCCTGACATGAAAAAAAAAGTAGATGATG
CTTTCATTTTGACATGTAATGTCTCCATGGAGTACGAAAAGAGTGAGGTC
AATGCTGGATTCTTCTACAAAACCGCTGACGAGAGAGAAAAGTTAGTCCA
CGCTGAACGAAAGTTCACCGATGATAAAGTTCGTCAAGTTATTGAATTCA
AGAAGAAAGTTTGCGATGCTGGTGACAAAGGATTTGTGATTGTCAACCAA
AAGGGTATTGATCCCGTCTCTTTGGACATGTTAGCAAAAGAAGGAATCGT
TGCTTTGAGAAGAGCTAAGAGAAGAAACATGGAAAGAATCCCTTTGGCAT
TTGGTGGTTATGCAGTCAACTCATTCGATGACCTCTCTGAAGATTGTCTC
GGAAAAGCTGGCAACGTTTACGAACATGCTTTAGGTGACAACAAATACAC
TTTCATCGAAGACACGGAGAACCCGAAATCAGTGACCATTTTGGTGAAAG
GTCCCAACAAGCACACCATCACTATGATCAAAGATGCTGTCCGTGATGGA
CTACGTGCTGTAAAGAACGCCATCGAAGACGGAGCTGTGATCCCTGGTGC
AGGAGCATACGAAATCGCTGCACACTCGGCATTGACGATCTTACGCGAAA
CGGTATCGACAAGAGCAAGACTCGGTGTTCAGGCTTTTGCTGACGCACTC
TTAATCATCCCCAAAGCGTTGGCCTCGAATTCCGGATACGATCCACAAGA
AGCGACCGTCAAATTACAAGCGGAATACGGAAAATCGAAAGTTCCGGTTG
GAATCGACTTAAACACGGGCGAACCAATGAACCCTGCAACGAACGGCGTT
TGGGACAACTATCGCGTTAAACGACAACTTATCAACTCATGGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_023177XLOC_023177Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038610-exon-sc0001892-1491911889:24593..24992TCONS_00038610-exon-sc0001892-1491911889:24593..24992Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:24593..24992TCONS_00038610-exon-sc0001892-1510915933:24593..24992Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:24593..24992TCONS_00038610-exon-sc0001892-1575043694:24593..24992Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:28893..29006TCONS_00038610-exon-sc0001892-1491911889:28893..29006Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:28893..29006TCONS_00038610-exon-sc0001892-1510915933:28893..29006Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:28893..29006TCONS_00038610-exon-sc0001892-1575043694:28893..29006Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:29723..29826TCONS_00038610-exon-sc0001892-1491911889:29723..29826Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:29723..29826TCONS_00038610-exon-sc0001892-1510915933:29723..29826Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:29723..29826TCONS_00038610-exon-sc0001892-1575043694:29723..29826Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:30442..30552TCONS_00038610-exon-sc0001892-1491911889:30442..30552Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:30442..30552TCONS_00038610-exon-sc0001892-1510915933:30442..30552Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:30442..30552TCONS_00038610-exon-sc0001892-1575043694:30442..30552Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:30784..30943TCONS_00038610-exon-sc0001892-1491911889:30784..30943Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:30784..30943TCONS_00038610-exon-sc0001892-1510915933:30784..30943Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:30784..30943TCONS_00038610-exon-sc0001892-1575043694:30784..30943Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:31660..31742TCONS_00038610-exon-sc0001892-1491911889:31660..31742Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:31660..31742TCONS_00038610-exon-sc0001892-1510915933:31660..31742Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:31660..31742TCONS_00038610-exon-sc0001892-1575043694:31660..31742Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:31968..32212TCONS_00038610-exon-sc0001892-1491911889:31968..32212Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:31968..32212TCONS_00038610-exon-sc0001892-1510915933:31968..32212Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:31968..32212TCONS_00038610-exon-sc0001892-1575043694:31968..32212Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:32516..32616TCONS_00038610-exon-sc0001892-1491911889:32516..32616Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:32516..32616TCONS_00038610-exon-sc0001892-1510915933:32516..32616Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:32516..32616TCONS_00038610-exon-sc0001892-1575043694:32516..32616Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1491911889:32793..33223TCONS_00038610-exon-sc0001892-1491911889:32793..33223Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1510915933:32793..33223TCONS_00038610-exon-sc0001892-1510915933:32793..33223Clytia hemisphaericaexon
TCONS_00038610-exon-sc0001892-1575043694:32793..33223TCONS_00038610-exon-sc0001892-1575043694:32793..33223Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00038610-proteinTCONS_00038610-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0001892supercontigsc0001892:24593..33223 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
360.064	353.519	168.726	130.619	111.844	88.203	119.146	136.295	172.504	171.253	226.236	206.612	305.076	325.065	251.797	253.809	231.547	218.547	86.0661	111.236	184.353	182.127	227.897	230.568	250.321	283.58	173.362	176.942	176.749	166.88
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012722Chap_CCT_zeta
IPR002423Cpn60/TCP-1
IPR027409GroEL-like_apical_dom
IPR027413GROEL-like_equatorial
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
Blast
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BLAST of TCONS_00038610 vs. Swiss-Prot (Human)
Match: TCPZ (T-complex protein 1 subunit zeta OS=Homo sapiens GN=CCT6A PE=1 SV=3)

HSP 1 Score: 627.476 bits (1617), Expect = 0.000e+0
Identity = 298/421 (70.78%), Postives = 358/421 (85.04%), Query Frame = 2 
Query:  266 TGDGTTSNCLIIGELLKQADLYVSEGLHPRLATEGFEMAKKRALEVLEEIKVENTMERDILINVARTSLRTKVPKELADHLTEIVVDAVLAIKRDGKPIDLHMVEIMEMTHKTDSETKLIRGIVMDHGARHPDMKKKVDDAFILTCNVSMEYEKSEVNAGFFYKTADEREKLVHAERKFTDDKVRQVIEFKKKVCDAGDKGFVIVNQKGIDPVSLDMLAKEGIVALRRAKRRNMERIPLAFGGYAVNSFDDLSEDCLGKAGNVYEHALGDNKYTFIEDTENPKSVTILVKGPNKHTITMIKDAVRDGLRAVKNAIEDGAVIPGAGAYEIAAHSALTILRETVSTRARLGVQAFADALLIIPKALASNSGYDPQEATVKLQAEYGKSKVPVGIDLNTGEPMNPATNGVWDNYRVKRQLINSW 1528
            TGDGTTSN LIIGELLKQADLY+SEGLHPR+ TEGFE AK++AL+ LEE+KV   M+R+ LI+VARTSLRTKV  ELAD LTE VVD++LAIK+  +PIDL M+EIMEM HK++++T LIRG+V+DHGARHPDMKK+V+DA+ILTCNVS+EYEK+EVN+GFFYK+A+EREKLV AERKF +D+V+++IE K+KVC   DKGFV++NQKGIDP SLD L+KEGIVALRRAKRRNMER+ LA GG A+NSFDDLS DCLG AG VYE+ LG+ K+TFIE   NP+SVT+L+KGPNKHT+T IKDAVRDGLRAVKNAI+DG V+PGAGA E+A   AL   + +V  RA+LGVQAFADALLIIPK LA NSG+D QE  VK+QAE+ +S   VG+DLNTGEPM  A  GVWDNY VK+QL++S 
Sbjct:   88 TGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSC 508
The following BLAST results are available for this feature:
BLAST of TCONS_00038610 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPZ0.000e+070.78T-complex protein 1 subunit zeta OS=Homo sapiens G... [more]
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