TCONS_00038610-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00038610-protein
Unique NameTCONS_00038610-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length384

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00038610-protein ID=TCONS_00038610-protein|Name=TCONS_00038610-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MAKKRALEVLEEIKVENTMERDILINVARTSLRTKVPKELADHLTEIVVD
AVLAIKRDGKPIDLHMVEIMEMTHKTDSETKLIRGIVMDHGARHPDMKKK
VDDAFILTCNVSMEYEKSEVNAGFFYKTADEREKLVHAERKFTDDKVRQV
IEFKKKVCDAGDKGFVIVNQKGIDPVSLDMLAKEGIVALRRAKRRNMERI
PLAFGGYAVNSFDDLSEDCLGKAGNVYEHALGDNKYTFIEDTENPKSVTI
LVKGPNKHTITMIKDAVRDGLRAVKNAIEDGAVIPGAGAYEIAAHSALTI
LRETVSTRARLGVQAFADALLIIPKALASNSGYDPQEATVKLQAEYGKSK
VPVGIDLNTGEPMNPATNGVWDNYRVKRQLINSW
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_023177XLOC_023177Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00038610TCONS_00038610Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012722Chap_CCT_zeta
IPR002423Cpn60/TCP-1
IPR027409GroEL-like_apical_dom
IPR027413GROEL-like_equatorial
Vocabulary: Biological Process
TermDefinition
GO:0006457protein folding
Vocabulary: Molecular Function
TermDefinition
GO:0051082unfolded protein binding
GO:0005524ATP binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006457 protein folding
molecular_function GO:0005524 ATP binding
molecular_function GO:0051082 unfolded protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012722T-complex protein 1, zeta subunitTIGRFAMTIGR02347TIGR02347coord: 1..383
e-value: 4.6E-181
score: 600.9
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 1..382
e-value: 4.2E-114
score: 381.8
IPR027409GroEL-like apical domainGENE3D3.50.7.10coord: 99..231
e-value: 4.3E-49
score: 166.1
IPR027409GroEL-like apical domainSUPERFAMILY52029GroEL apical domain-likecoord: 79..254
NoneNo IPR availableGENE3D3.30.260.10coord: 12..98
e-value: 8.7E-20
score: 70.2
NoneNo IPR availableSUPERFAMILY54849GroEL-intermediate domain likecoord: 18..83
coord: 244..281
NoneNo IPR availableSUPERFAMILY48592GroEL equatorial domain-likecoord: 281..382
coord: 2..17
IPR027413GroEL-like equatorial domainGENE3D1.10.560.10coord: 232..383
e-value: 1.3E-44
score: 151.6

Blast
[Close]
BLAST of TCONS_00038610-protein vs. Swiss-Prot (Human)
Match: TCPW (T-complex protein 1 subunit zeta-2 OS=Homo sapiens GN=CCT6B PE=1 SV=5)

HSP 1 Score: 559.296 bits (1440), Expect = 0.000e+0
Identity = 265/383 (69.19%), Postives = 322/383 (84.07%), Query Frame = 0 
Query:    2 AKKRALEVLEEIKVENTMERDILINVARTSLRTKVPKELADHLTEIVVDAVLAIKRDGKPIDLHMVEIMEMTHKTDSETKLIRGIVMDHGARHPDMKKKVDDAFILTCNVSMEYEKSEVNAGFFYKTADEREKLVHAERKFTDDKVRQVIEFKKKVCDAGDKGFVIVNQKGIDPVSLDMLAKEGIVALRRAKRRNMERIPLAFGGYAVNSFDDLSEDCLGKAGNVYEHALGDNKYTFIEDTENPKSVTILVKGPNKHTITMIKDAVRDGLRAVKNAIEDGAVIPGAGAYEIAAHSALTILRETVSTRARLGVQAFADALLIIPKALASNSGYDPQEATVKLQAEYGKSKVPVGIDLNTGEPMNPATNGVWDNYRVKRQLINSW 384
            AK +ALEVLEE+KV   M+R IL++VARTSL+TKV  ELAD LTE+VVD+VLA++R G PIDL MVEIMEM HK  ++TKLI+G+V+DHGARHPDMKK+V+DAFIL CNVS+EYEK+EVN+GFFYKTA+E+EKLV AERKF +D+V+++I+ K KVC   +KGFV++NQKGIDP SLD LAK GIVALRRAKRRNMER+ LA GG AVNSF+DL+ DCLG AG VYE+ LG+ K+TFIE+  NP SVT+LVKGPNKHT+T +KDA+RDGLRA+KNAIEDG ++PGAGA E+A   AL   + ++  RARLGVQAFADALLIIPK LA N+GYDPQE  VK+QAE+ +SK  VG+DLNTGEPM  A  GVWDNY VK+QL++S 
Sbjct:  126 AKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVRRPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYEKTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPFSLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKFTFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAEALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVDLNTGEPMVAADAGVWDNYCVKKQLLHSC 508
The following BLAST results are available for this feature:
BLAST of TCONS_00038610-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TCPW0.000e+069.19T-complex protein 1 subunit zeta-2 OS=Homo sapiens... [more]
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